Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1462660 | XP_039688430.1 | 94.483 | 145 | 7 | 1 | 1 | 145 | 1 | 144 | 4.47e-92 | 284 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1462660 | sp|Q94AM9|CID4_ARATH | 32.540 | 126 | 79 | 3 | 22 | 141 | 42 | 167 | 1.48e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1462660 | G7IXL1 | 94.483 | 145 | 7 | 1 | 1 | 145 | 1 | 144 | 2.30e-92 | 285 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002560 | Msa1462660 | 0.827053 | 1.934687e-54 | -8.615850e-47 |
Msa0002680 | Msa1462660 | 0.828353 | 9.426321e-55 | -8.615850e-47 |
Msa0002710 | Msa1462660 | 0.811260 | 7.652349e-51 | -8.615850e-47 |
Msa0003220 | Msa1462660 | 0.809360 | 1.966688e-50 | -8.615850e-47 |
Msa0005620 | Msa1462660 | 0.816664 | 4.921053e-52 | -8.615850e-47 |
Msa0008220 | Msa1462660 | 0.843257 | 1.566471e-58 | -8.615850e-47 |
Msa0010770 | Msa1462660 | 0.819410 | 1.178490e-52 | -8.615850e-47 |
Msa0011930 | Msa1462660 | 0.807604 | 4.659948e-50 | -8.615850e-47 |
Msa0012940 | Msa1462660 | 0.810007 | 1.427542e-50 | -8.615850e-47 |
Msa0017320 | Msa1462660 | 0.818955 | 1.495971e-52 | -8.615850e-47 |
Msa0022750 | Msa1462660 | -0.811433 | 7.018544e-51 | -8.615850e-47 |
Msa0031180 | Msa1462660 | 0.832809 | 7.646064e-56 | -8.615850e-47 |
Msa0035120 | Msa1462660 | 0.805445 | 1.330222e-49 | -8.615850e-47 |
Msa0039250 | Msa1462660 | 0.812060 | 5.126315e-51 | -8.615850e-47 |
Msa0041690 | Msa1462660 | 0.820817 | 5.613560e-53 | -8.615850e-47 |
Msa0043500 | Msa1462660 | 0.818728 | 1.684270e-52 | -8.615850e-47 |
Msa0043650 | Msa1462660 | 0.823520 | 1.325562e-53 | -8.615850e-47 |
Msa0047640 | Msa1462660 | 0.812754 | 3.615004e-51 | -8.615850e-47 |
Msa0054530 | Msa1462660 | 0.812276 | 4.599931e-51 | -8.615850e-47 |
Msa0054820 | Msa1462660 | 0.838889 | 2.199098e-57 | -8.615850e-47 |
Msa0055070 | Msa1462660 | 0.805439 | 1.334475e-49 | -8.615850e-47 |
Msa0056450 | Msa1462660 | 0.841464 | 4.676082e-58 | -8.615850e-47 |
Msa0057370 | Msa1462660 | 0.842150 | 3.082413e-58 | -8.615850e-47 |
Msa0064110 | Msa1462660 | 0.813525 | 2.449029e-51 | -8.615850e-47 |
Msa0064920 | Msa1462660 | 0.820294 | 7.400448e-53 | -8.615850e-47 |
Msa0077450 | Msa1462660 | 0.820964 | 5.191507e-53 | -8.615850e-47 |
Msa0078480 | Msa1462660 | 0.818824 | 1.602325e-52 | -8.615850e-47 |
Msa0081650 | Msa1462660 | 0.801731 | 7.840265e-49 | -8.615850e-47 |
Msa0089980 | Msa1462660 | 0.818047 | 2.403512e-52 | -8.615850e-47 |
Msa0090010 | Msa1462660 | 0.809852 | 1.541661e-50 | -8.615850e-47 |
Msa0092410 | Msa1462660 | 0.802120 | 6.521861e-49 | -8.615850e-47 |
Msa0092440 | Msa1462660 | 0.808935 | 2.425229e-50 | -8.615850e-47 |
Msa0096580 | Msa1462660 | 0.821352 | 4.225640e-53 | -8.615850e-47 |
Msa0100160 | Msa1462660 | 0.823789 | 1.146244e-53 | -8.615850e-47 |
Msa0102270 | Msa1462660 | 0.800471 | 1.419068e-48 | -8.615850e-47 |
Msa0106620 | Msa1462660 | 0.847155 | 1.383005e-59 | -8.615850e-47 |
Msa0106710 | Msa1462660 | 0.830608 | 2.668879e-55 | -8.615850e-47 |
Msa0108390 | Msa1462660 | 0.808931 | 2.429793e-50 | -8.615850e-47 |
Msa0116790 | Msa1462660 | 0.845313 | 4.389779e-59 | -8.615850e-47 |
Msa1349450 | Msa1462660 | 0.828823 | 7.254775e-55 | -8.615850e-47 |
Msa1349520 | Msa1462660 | 0.805267 | 1.449741e-49 | -8.615850e-47 |
Msa1358240 | Msa1462660 | 0.800707 | 1.270088e-48 | -8.615850e-47 |
Msa1359560 | Msa1462660 | 0.829499 | 4.975753e-55 | -8.615850e-47 |
Msa1359920 | Msa1462660 | 0.825176 | 5.407815e-54 | -8.615850e-47 |
Msa1364430 | Msa1462660 | 0.817875 | 2.628094e-52 | -8.615850e-47 |
Msa1366300 | Msa1462660 | 0.813153 | 2.957049e-51 | -8.615850e-47 |
Msa1366550 | Msa1462660 | 0.824097 | 9.707112e-54 | -8.615850e-47 |
Msa1368430 | Msa1462660 | 0.805739 | 1.154153e-49 | -8.615850e-47 |
Msa1383230 | Msa1462660 | 0.801913 | 7.194105e-49 | -8.615850e-47 |
Msa1393820 | Msa1462660 | 0.828042 | 1.119783e-54 | -8.615850e-47 |
Msa1400120 | Msa1462660 | 0.804300 | 2.307688e-49 | -8.615850e-47 |
Msa1401270 | Msa1462660 | 0.812431 | 4.253627e-51 | -8.615850e-47 |
Msa1401460 | Msa1462660 | 0.820618 | 6.235041e-53 | -8.615850e-47 |
Msa1410420 | Msa1462660 | 0.806844 | 6.751536e-50 | -8.615850e-47 |
Msa1411950 | Msa1462660 | 0.808079 | 3.693676e-50 | -8.615850e-47 |
Msa1416260 | Msa1462660 | 0.819887 | 9.171369e-53 | -8.615850e-47 |
Msa1418260 | Msa1462660 | 0.815015 | 1.147936e-51 | -8.615850e-47 |
Msa1420250 | Msa1462660 | 0.863604 | 2.211110e-64 | -8.615850e-47 |
Msa1424350 | Msa1462660 | 0.819631 | 1.049608e-52 | -8.615850e-47 |
Msa1424630 | Msa1462660 | 0.803374 | 3.593421e-49 | -8.615850e-47 |
Msa1426570 | Msa1462660 | 0.812606 | 3.896454e-51 | -8.615850e-47 |
Msa1426710 | Msa1462660 | 0.814819 | 1.268837e-51 | -8.615850e-47 |
Msa1426910 | Msa1462660 | 0.824274 | 8.821928e-54 | -8.615850e-47 |
Msa1431170 | Msa1462660 | 0.815314 | 9.848832e-52 | -8.615850e-47 |
Msa1433220 | Msa1462660 | 0.835260 | 1.860760e-56 | -8.615850e-47 |
Msa1438520 | Msa1462660 | 0.802096 | 6.596925e-49 | -8.615850e-47 |
Msa1439710 | Msa1462660 | 0.800013 | 1.758369e-48 | -8.615850e-47 |
Msa1442790 | Msa1462660 | 0.801149 | 1.031992e-48 | -8.615850e-47 |
Msa1446080 | Msa1462660 | 0.817586 | 3.053383e-52 | -8.615850e-47 |
Msa1446780 | Msa1462660 | 0.853728 | 1.972540e-61 | -8.615850e-47 |
Msa1450720 | Msa1462660 | 0.823512 | 1.331022e-53 | -8.615850e-47 |
Msa1453360 | Msa1462660 | 0.816503 | 5.348685e-52 | -8.615850e-47 |
Msa1454530 | Msa1462660 | 0.811372 | 7.234941e-51 | -8.615850e-47 |
Msa1454960 | Msa1462660 | 0.832120 | 1.133254e-55 | -8.615850e-47 |
Msa1458340 | Msa1462660 | 0.820908 | 5.347655e-53 | -8.615850e-47 |
Msa1461540 | Msa1462660 | 0.801356 | 9.358270e-49 | -8.615850e-47 |
Msa1462660 | Msa1462930 | 0.808022 | 3.798602e-50 | -8.615850e-47 |
Msa1462660 | Msa1463010 | 0.806371 | 8.499011e-50 | -8.615850e-47 |
Msa1462660 | Msa1463030 | 0.831043 | 2.087805e-55 | -8.615850e-47 |
Msa1462660 | Msa1464290 | 0.811018 | 8.633490e-51 | -8.615850e-47 |
Msa1462660 | Msa1466590 | 0.800306 | 1.533361e-48 | -8.615850e-47 |
Msa1462660 | Msa1467000 | 0.848393 | 6.305612e-60 | -8.615850e-47 |
Msa0607320 | Msa1462660 | 0.807298 | 5.411874e-50 | -8.615850e-47 |
Msa0613710 | Msa1462660 | 0.802543 | 5.338468e-49 | -8.615850e-47 |
Msa0624940 | Msa1462660 | 0.814337 | 1.622178e-51 | -8.615850e-47 |
Msa0626270 | Msa1462660 | 0.813953 | 1.971917e-51 | -8.615850e-47 |
Msa0628500 | Msa1462660 | 0.802194 | 6.297901e-49 | -8.615850e-47 |
Msa0640940 | Msa1462660 | 0.811610 | 6.424377e-51 | -8.615850e-47 |
Msa0641730 | Msa1462660 | 0.860603 | 1.841161e-63 | -8.615850e-47 |
Msa0647430 | Msa1462660 | 0.803035 | 4.224645e-49 | -8.615850e-47 |
Msa0652690 | Msa1462660 | 0.832872 | 7.378279e-56 | -8.615850e-47 |
Msa0656000 | Msa1462660 | 0.836112 | 1.132349e-56 | -8.615850e-47 |
Msa0661320 | Msa1462660 | 0.842641 | 2.284251e-58 | -8.615850e-47 |
Msa0664540 | Msa1462660 | 0.805870 | 1.083434e-49 | -8.615850e-47 |
Msa0679100 | Msa1462660 | 0.822824 | 1.926377e-53 | -8.615850e-47 |
Msa0687450 | Msa1462660 | 0.813029 | 3.147169e-51 | -8.615850e-47 |
Msa0689420 | Msa1462660 | 0.833187 | 6.158197e-56 | -8.615850e-47 |
Msa0689760 | Msa1462660 | 0.863460 | 2.450133e-64 | -8.615850e-47 |
Msa0696850 | Msa1462660 | 0.822166 | 2.738990e-53 | -8.615850e-47 |
Msa0698100 | Msa1462660 | 0.825080 | 5.695905e-54 | -8.615850e-47 |
Msa0699880 | Msa1462660 | 0.805336 | 1.402565e-49 | -8.615850e-47 |
Msa0705190 | Msa1462660 | 0.808097 | 3.660904e-50 | -8.615850e-47 |
Msa0705390 | Msa1462660 | 0.805030 | 1.624816e-49 | -8.615850e-47 |
Msa0712560 | Msa1462660 | 0.817525 | 3.151670e-52 | -8.615850e-47 |
Msa0716860 | Msa1462660 | 0.862262 | 5.739172e-64 | -8.615850e-47 |
Msa0743530 | Msa1462660 | 0.824078 | 9.807731e-54 | -8.615850e-47 |
Msa0749400 | Msa1462660 | 0.832157 | 1.109513e-55 | -8.615850e-47 |
Msa0750250 | Msa1462660 | 0.830979 | 2.164082e-55 | -8.615850e-47 |
Msa0751260 | Msa1462660 | 0.837140 | 6.194477e-57 | -8.615850e-47 |
Msa0756380 | Msa1462660 | 0.811636 | 6.339042e-51 | -8.615850e-47 |
Msa0756530 | Msa1462660 | 0.804174 | 2.451811e-49 | -8.615850e-47 |
Msa0757800 | Msa1462660 | 0.844214 | 8.682429e-59 | -8.615850e-47 |
Msa0763890 | Msa1462660 | 0.806398 | 8.388682e-50 | -8.615850e-47 |
Msa0763920 | Msa1462660 | 0.823020 | 1.734331e-53 | -8.615850e-47 |
Msa0767100 | Msa1462660 | 0.804885 | 1.742262e-49 | -8.615850e-47 |
Msa0780280 | Msa1462660 | 0.828346 | 9.459678e-55 | -8.615850e-47 |
Msa0789560 | Msa1462660 | 0.844269 | 8.391633e-59 | -8.615850e-47 |
Msa0795070 | Msa1462660 | 0.813352 | 2.673101e-51 | -8.615850e-47 |
Msa0800700 | Msa1462660 | 0.845276 | 4.491815e-59 | -8.615850e-47 |
Msa0809140 | Msa1462660 | 0.802719 | 4.909387e-49 | -8.615850e-47 |
Msa0821800 | Msa1462660 | 0.827729 | 1.331640e-54 | -8.615850e-47 |
Msa0832090 | Msa1462660 | 0.804986 | 1.659925e-49 | -8.615850e-47 |
Msa0126230 | Msa1462660 | 0.844462 | 7.448137e-59 | -8.615850e-47 |
Msa0127100 | Msa1462660 | 0.802887 | 4.531918e-49 | -8.615850e-47 |
Msa0133720 | Msa1462660 | 0.822861 | 1.888694e-53 | -8.615850e-47 |
Msa0133820 | Msa1462660 | 0.840051 | 1.097700e-57 | -8.615850e-47 |
Msa0138210 | Msa1462660 | 0.824218 | 9.093135e-54 | -8.615850e-47 |
Msa0138750 | Msa1462660 | 0.825446 | 4.665851e-54 | -8.615850e-47 |
Msa0141400 | Msa1462660 | 0.800890 | 1.165325e-48 | -8.615850e-47 |
Msa0143850 | Msa1462660 | 0.833347 | 5.617837e-56 | -8.615850e-47 |
Msa0158130 | Msa1462660 | -0.806807 | 6.874611e-50 | -8.615850e-47 |
Msa0160670 | Msa1462660 | 0.805995 | 1.019671e-49 | -8.615850e-47 |
Msa0167850 | Msa1462660 | 0.802340 | 5.876070e-49 | -8.615850e-47 |
Msa0168870 | Msa1462660 | 0.822360 | 2.470173e-53 | -8.615850e-47 |
Msa0171200 | Msa1462660 | 0.816648 | 4.963226e-52 | -8.615850e-47 |
Msa0174360 | Msa1462660 | 0.807601 | 4.668052e-50 | -8.615850e-47 |
Msa0177170 | Msa1462660 | 0.801155 | 1.028906e-48 | -8.615850e-47 |
Msa0181230 | Msa1462660 | 0.809242 | 2.084905e-50 | -8.615850e-47 |
Msa0183420 | Msa1462660 | 0.839560 | 1.472580e-57 | -8.615850e-47 |
Msa0183760 | Msa1462660 | 0.831876 | 1.301975e-55 | -8.615850e-47 |
Msa0187030 | Msa1462660 | 0.818562 | 1.837451e-52 | -8.615850e-47 |
Msa0187830 | Msa1462660 | 0.819709 | 1.007221e-52 | -8.615850e-47 |
Msa0191890 | Msa1462660 | 0.813861 | 2.065734e-51 | -8.615850e-47 |
Msa0192640 | Msa1462660 | 0.813895 | 2.030523e-51 | -8.615850e-47 |
Msa0200560 | Msa1462660 | 0.824606 | 7.369930e-54 | -8.615850e-47 |
Msa0205010 | Msa1462660 | 0.808628 | 2.820235e-50 | -8.615850e-47 |
Msa0207350 | Msa1462660 | 0.806439 | 8.221495e-50 | -8.615850e-47 |
Msa0218350 | Msa1462660 | 0.808393 | 3.165995e-50 | -8.615850e-47 |
Msa0218460 | Msa1462660 | 0.800122 | 1.671119e-48 | -8.615850e-47 |
Msa0220730 | Msa1462660 | 0.827019 | 1.971629e-54 | -8.615850e-47 |
Msa0225220 | Msa1462660 | 0.815233 | 1.026579e-51 | -8.615850e-47 |
Msa0225640 | Msa1462660 | 0.813898 | 2.027388e-51 | -8.615850e-47 |
Msa0227230 | Msa1462660 | 0.804960 | 1.680476e-49 | -8.615850e-47 |
Msa0227340 | Msa1462660 | 0.804897 | 1.732708e-49 | -8.615850e-47 |
Msa0230370 | Msa1462660 | 0.810131 | 1.342630e-50 | -8.615850e-47 |
Msa0231190 | Msa1462660 | 0.828358 | 9.399719e-55 | -8.615850e-47 |
Msa0236770 | Msa1462660 | 0.804010 | 2.651693e-49 | -8.615850e-47 |
Msa0237200 | Msa1462660 | 0.808856 | 2.521291e-50 | -8.615850e-47 |
Msa0237210 | Msa1462660 | 0.808084 | 3.684475e-50 | -8.615850e-47 |
Msa0238030 | Msa1462660 | 0.820929 | 5.288782e-53 | -8.615850e-47 |
Msa1225600 | Msa1462660 | 0.801107 | 1.052592e-48 | -8.615850e-47 |
Msa1243870 | Msa1462660 | 0.801940 | 7.102741e-49 | -8.615850e-47 |
Msa1254620 | Msa1462660 | 0.826514 | 2.602542e-54 | -8.615850e-47 |
Msa1259640 | Msa1462660 | 0.857633 | 1.429509e-62 | -8.615850e-47 |
Msa1262010 | Msa1462660 | 0.809477 | 1.855600e-50 | -8.615850e-47 |
Msa1283740 | Msa1462660 | 0.809646 | 1.707232e-50 | -8.615850e-47 |
Msa1299330 | Msa1462660 | 0.807689 | 4.471964e-50 | -8.615850e-47 |
Msa1320820 | Msa1462660 | 0.800890 | 1.165325e-48 | -8.615850e-47 |
Msa1329450 | Msa1462660 | 0.807139 | 5.848285e-50 | -8.615850e-47 |
Msa1329790 | Msa1462660 | 0.858735 | 6.716109e-63 | -8.615850e-47 |
Msa1332050 | Msa1462660 | 0.803136 | 4.026773e-49 | -8.615850e-47 |
Msa1336040 | Msa1462660 | 0.817668 | 2.927032e-52 | -8.615850e-47 |
Msa1338250 | Msa1462660 | 0.800386 | 1.477078e-48 | -8.615850e-47 |
Msa1340130 | Msa1462660 | 0.817640 | 2.969474e-52 | -8.615850e-47 |
Msa1341490 | Msa1462660 | 0.841818 | 3.772593e-58 | -8.615850e-47 |
Msa1342630 | Msa1462660 | 0.802455 | 5.564855e-49 | -8.615850e-47 |
Msa0376020 | Msa1462660 | 0.815788 | 7.726143e-52 | -8.615850e-47 |
Msa0377440 | Msa1462660 | 0.823779 | 1.152554e-53 | -8.615850e-47 |
Msa0378970 | Msa1462660 | 0.810932 | 9.014025e-51 | -8.615850e-47 |
Msa0379610 | Msa1462660 | 0.806520 | 7.905744e-50 | -8.615850e-47 |
Msa0382370 | Msa1462660 | 0.823139 | 1.626466e-53 | -8.615850e-47 |
Msa0382490 | Msa1462660 | 0.804640 | 1.960578e-49 | -8.615850e-47 |
Msa0387050 | Msa1462660 | 0.831458 | 1.650209e-55 | -8.615850e-47 |
Msa0389910 | Msa1462660 | 0.848914 | 4.523788e-60 | -8.615850e-47 |
Msa0394690 | Msa1462660 | 0.812037 | 5.185629e-51 | -8.615850e-47 |
Msa0395980 | Msa1462660 | 0.831264 | 1.842121e-55 | -8.615850e-47 |
Msa0397460 | Msa1462660 | 0.811928 | 5.478036e-51 | -8.615850e-47 |
Msa0398200 | Msa1462660 | 0.822435 | 2.373005e-53 | -8.615850e-47 |
Msa0403660 | Msa1462660 | 0.805464 | 1.318187e-49 | -8.615850e-47 |
Msa0410870 | Msa1462660 | 0.803888 | 2.811265e-49 | -8.615850e-47 |
Msa0411410 | Msa1462660 | 0.831605 | 1.518513e-55 | -8.615850e-47 |
Msa0417650 | Msa1462660 | 0.809714 | 1.651008e-50 | -8.615850e-47 |
Msa0417730 | Msa1462660 | 0.800904 | 1.157683e-48 | -8.615850e-47 |
Msa0422180 | Msa1462660 | 0.800776 | 1.229754e-48 | -8.615850e-47 |
Msa0423840 | Msa1462660 | 0.841604 | 4.295513e-58 | -8.615850e-47 |
Msa0429090 | Msa1462660 | 0.810459 | 1.140842e-50 | -8.615850e-47 |
Msa0430870 | Msa1462660 | 0.810801 | 9.622201e-51 | -8.615850e-47 |
Msa0430950 | Msa1462660 | 0.820413 | 6.951447e-53 | -8.615850e-47 |
Msa0432160 | Msa1462660 | 0.829326 | 5.481198e-55 | -8.615850e-47 |
Msa0432170 | Msa1462660 | 0.815607 | 8.476334e-52 | -8.615850e-47 |
Msa0432670 | Msa1462660 | 0.808153 | 3.562452e-50 | -8.615850e-47 |
Msa0434570 | Msa1462660 | 0.806728 | 7.143466e-50 | -8.615850e-47 |
Msa0434770 | Msa1462660 | 0.805490 | 1.302096e-49 | -8.615850e-47 |
Msa0440510 | Msa1462660 | 0.815099 | 1.099861e-51 | -8.615850e-47 |
Msa0442310 | Msa1462660 | 0.810461 | 1.139400e-50 | -8.615850e-47 |
Msa0443000 | Msa1462660 | 0.832765 | 7.841780e-56 | -8.615850e-47 |
Msa0467100 | Msa1462660 | 0.819518 | 1.113406e-52 | -8.615850e-47 |
Msa0468250 | Msa1462660 | 0.818865 | 1.568572e-52 | -8.615850e-47 |
Msa0468410 | Msa1462660 | 0.830272 | 3.224130e-55 | -8.615850e-47 |
Msa0468800 | Msa1462660 | 0.807771 | 4.294697e-50 | -8.615850e-47 |
Msa0473330 | Msa1462660 | 0.829810 | 4.178436e-55 | -8.615850e-47 |
Msa0473980 | Msa1462660 | 0.833522 | 5.082876e-56 | -8.615850e-47 |
Msa0475500 | Msa1462660 | 0.808620 | 2.832611e-50 | -8.615850e-47 |
Msa0476680 | Msa1462660 | 0.834454 | 2.969798e-56 | -8.615850e-47 |
Msa0480780 | Msa1462660 | 0.837050 | 6.533632e-57 | -8.615850e-47 |
Msa0981310 | Msa1462660 | 0.802464 | 5.542060e-49 | -8.615850e-47 |
Msa0986510 | Msa1462660 | 0.826112 | 3.244186e-54 | -8.615850e-47 |
Msa0992600 | Msa1462660 | 0.807423 | 5.092385e-50 | -8.615850e-47 |
Msa0996020 | Msa1462660 | 0.801400 | 9.164952e-49 | -8.615850e-47 |
Msa1000160 | Msa1462660 | 0.803889 | 2.809931e-49 | -8.615850e-47 |
Msa1006010 | Msa1462660 | -0.811953 | 5.408712e-51 | -8.615850e-47 |
Msa1008750 | Msa1462660 | 0.802044 | 6.761824e-49 | -8.615850e-47 |
Msa1010070 | Msa1462660 | 0.835849 | 1.320700e-56 | -8.615850e-47 |
Msa1027360 | Msa1462660 | 0.820009 | 8.600151e-53 | -8.615850e-47 |
Msa1028280 | Msa1462660 | 0.807434 | 5.063996e-50 | -8.615850e-47 |
Msa1034500 | Msa1462660 | 0.831329 | 1.775688e-55 | -8.615850e-47 |
Msa1036740 | Msa1462660 | 0.800560 | 1.361201e-48 | -8.615850e-47 |
Msa1038080 | Msa1462660 | 0.809619 | 1.729942e-50 | -8.615850e-47 |
Msa1050700 | Msa1462660 | 0.811290 | 7.539321e-51 | -8.615850e-47 |
Msa1050740 | Msa1462660 | 0.803319 | 3.689437e-49 | -8.615850e-47 |
Msa1051600 | Msa1462660 | 0.804017 | 2.643631e-49 | -8.615850e-47 |
Msa1072600 | Msa1462660 | 0.815097 | 1.100577e-51 | -8.615850e-47 |
Msa1077070 | Msa1462660 | 0.822768 | 1.985200e-53 | -8.615850e-47 |
Msa1080960 | Msa1462660 | 0.800940 | 1.138453e-48 | -8.615850e-47 |
Msa1088410 | Msa1462660 | 0.819600 | 1.066693e-52 | -8.615850e-47 |
Msa1095790 | Msa1462660 | 0.848459 | 6.049540e-60 | -8.615850e-47 |
Msa1096060 | Msa1462660 | 0.804822 | 1.796408e-49 | -8.615850e-47 |
Msa1098890 | Msa1462660 | 0.856599 | 2.884554e-62 | -8.615850e-47 |
Msa0243250 | Msa1462660 | 0.802877 | 4.553905e-49 | -8.615850e-47 |
Msa0249550 | Msa1462660 | 0.801461 | 8.904776e-49 | -8.615850e-47 |
Msa0253290 | Msa1462660 | 0.800337 | 1.511008e-48 | -8.615850e-47 |
Msa0264830 | Msa1462660 | 0.809899 | 1.506131e-50 | -8.615850e-47 |
Msa0269520 | Msa1462660 | 0.803755 | 2.996672e-49 | -8.615850e-47 |
Msa0274970 | Msa1462660 | 0.804048 | 2.603686e-49 | -8.615850e-47 |
Msa0279390 | Msa1462660 | 0.808162 | 3.546931e-50 | -8.615850e-47 |
Msa0304100 | Msa1462660 | 0.816401 | 5.636699e-52 | -8.615850e-47 |
Msa0305330 | Msa1462660 | 0.822420 | 2.392126e-53 | -8.615850e-47 |
Msa0311060 | Msa1462660 | 0.802701 | 4.951219e-49 | -8.615850e-47 |
Msa0312530 | Msa1462660 | 0.820761 | 5.781579e-53 | -8.615850e-47 |
Msa0312910 | Msa1462660 | 0.817697 | 2.882685e-52 | -8.615850e-47 |
Msa0315680 | Msa1462660 | 0.809258 | 2.068030e-50 | -8.615850e-47 |
Msa0318880 | Msa1462660 | 0.818791 | 1.630276e-52 | -8.615850e-47 |
Msa0320800 | Msa1462660 | 0.821103 | 4.823569e-53 | -8.615850e-47 |
Msa0322900 | Msa1462660 | 0.824950 | 6.112185e-54 | -8.615850e-47 |
Msa0323260 | Msa1462660 | 0.801333 | 9.460958e-49 | -8.615850e-47 |
Msa0340340 | Msa1462660 | 0.809827 | 1.561211e-50 | -8.615850e-47 |
Msa0341840 | Msa1462660 | 0.816201 | 6.247199e-52 | -8.615850e-47 |
Msa0342010 | Msa1462660 | 0.834614 | 2.706843e-56 | -8.615850e-47 |
Msa0347950 | Msa1462660 | 0.833449 | 5.299042e-56 | -8.615850e-47 |
Msa0347990 | Msa1462660 | 0.839794 | 1.279959e-57 | -8.615850e-47 |
Msa0348530 | Msa1462660 | 0.820051 | 8.411002e-53 | -8.615850e-47 |
Msa0358400 | Msa1462660 | 0.823067 | 1.691055e-53 | -8.615850e-47 |
Msa0362890 | Msa1462660 | 0.822118 | 2.810591e-53 | -8.615850e-47 |
Msa0363060 | Msa1462660 | 0.803719 | 3.048122e-49 | -8.615850e-47 |
Msa0363400 | Msa1462660 | 0.823293 | 1.497327e-53 | -8.615850e-47 |
Msa0363810 | Msa1462660 | 0.803510 | 3.367472e-49 | -8.615850e-47 |
Msa1122780 | Msa1462660 | 0.822450 | 2.353710e-53 | -8.615850e-47 |
Msa1127430 | Msa1462660 | 0.827717 | 1.341042e-54 | -8.615850e-47 |
Msa1129690 | Msa1462660 | 0.843694 | 1.197171e-58 | -8.615850e-47 |
Msa1130400 | Msa1462660 | 0.806025 | 1.005020e-49 | -8.615850e-47 |
Msa1130530 | Msa1462660 | 0.817421 | 3.326859e-52 | -8.615850e-47 |
Msa1143020 | Msa1462660 | 0.801094 | 1.058914e-48 | -8.615850e-47 |
Msa1145810 | Msa1462660 | 0.802445 | 5.592457e-49 | -8.615850e-47 |
Msa1168550 | Msa1462660 | 0.808733 | 2.679176e-50 | -8.615850e-47 |
Msa1188180 | Msa1462660 | 0.805084 | 1.583542e-49 | -8.615850e-47 |
Msa1201640 | Msa1462660 | 0.839672 | 1.377125e-57 | -8.615850e-47 |
Msa1203400 | Msa1462660 | 0.803743 | 3.013341e-49 | -8.615850e-47 |
Msa1211340 | Msa1462660 | 0.860132 | 2.556370e-63 | -8.615850e-47 |
Msa1215070 | Msa1462660 | 0.818983 | 1.474609e-52 | -8.615850e-47 |
Msa1220870 | Msa1462660 | 0.805520 | 1.283046e-49 | -8.615850e-47 |
Msa0483740 | Msa1462660 | 0.813667 | 2.278956e-51 | -8.615850e-47 |
Msa0491000 | Msa1462660 | 0.825745 | 3.963617e-54 | -8.615850e-47 |
Msa0514610 | Msa1462660 | 0.806530 | 7.866762e-50 | -8.615850e-47 |
Msa0516020 | Msa1462660 | 0.816944 | 4.258767e-52 | -8.615850e-47 |
Msa0516120 | Msa1462660 | 0.821387 | 4.148663e-53 | -8.615850e-47 |
Msa0517650 | Msa1462660 | 0.806061 | 9.878297e-50 | -8.615850e-47 |
Msa0518960 | Msa1462660 | 0.807040 | 6.137618e-50 | -8.615850e-47 |
Msa0521010 | Msa1462660 | 0.834046 | 3.759324e-56 | -8.615850e-47 |
Msa0531250 | Msa1462660 | 0.819245 | 1.285287e-52 | -8.615850e-47 |
Msa0537770 | Msa1462660 | 0.828613 | 8.155503e-55 | -8.615850e-47 |
Msa0553200 | Msa1462660 | 0.834460 | 2.958898e-56 | -8.615850e-47 |
Msa0556010 | Msa1462660 | 0.803879 | 2.823265e-49 | -8.615850e-47 |
Msa0559500 | Msa1462660 | 0.808359 | 3.219439e-50 | -8.615850e-47 |
Msa0566750 | Msa1462660 | 0.805739 | 1.154319e-49 | -8.615850e-47 |
Msa0573040 | Msa1462660 | 0.810113 | 1.354717e-50 | -8.615850e-47 |
Msa0574390 | Msa1462660 | 0.812631 | 3.846854e-51 | -8.615850e-47 |
Msa0576680 | Msa1462660 | 0.831403 | 1.703011e-55 | -8.615850e-47 |
Msa0579660 | Msa1462660 | 0.819001 | 1.460538e-52 | -8.615850e-47 |
Msa0581690 | Msa1462660 | 0.808547 | 2.935407e-50 | -8.615850e-47 |
Msa0588090 | Msa1462660 | 0.809027 | 2.318203e-50 | -8.615850e-47 |
Msa0594200 | Msa1462660 | 0.807782 | 4.272837e-50 | -8.615850e-47 |
Msa0597770 | Msa1462660 | 0.829473 | 5.046459e-55 | -8.615850e-47 |
Msa0601950 | Msa1462660 | 0.829326 | 5.478784e-55 | -8.615850e-47 |
Msa0844110 | Msa1462660 | 0.809844 | 1.547501e-50 | -8.615850e-47 |
Msa0861830 | Msa1462660 | 0.821229 | 4.511785e-53 | -8.615850e-47 |
Msa0868160 | Msa1462660 | 0.838388 | 2.962708e-57 | -8.615850e-47 |
Msa0870650 | Msa1462660 | 0.818584 | 1.816577e-52 | -8.615850e-47 |
Msa0873860 | Msa1462660 | 0.815878 | 7.376044e-52 | -8.615850e-47 |
Msa0896240 | Msa1462660 | 0.808506 | 2.994723e-50 | -8.615850e-47 |
Msa0902710 | Msa1462660 | 0.806031 | 1.001929e-49 | -8.615850e-47 |
Msa0903780 | Msa1462660 | 0.804081 | 2.563246e-49 | -8.615850e-47 |
Msa0932350 | Msa1462660 | 0.802372 | 5.788129e-49 | -8.615850e-47 |
Msa0934140 | Msa1462660 | 0.814363 | 1.600260e-51 | -8.615850e-47 |
Msa0936390 | Msa1462660 | 0.816920 | 4.312306e-52 | -8.615850e-47 |
Msa0939000 | Msa1462660 | 0.807977 | 3.882542e-50 | -8.615850e-47 |
Msa0945240 | Msa1462660 | 0.840208 | 9.985041e-58 | -8.615850e-47 |
Msa0969330 | Msa1462660 | 0.827979 | 1.159956e-54 | -8.615850e-47 |
Msa0970990 | Msa1462660 | 0.808208 | 3.466927e-50 | -8.615850e-47 |
Msa0971650 | Msa1462660 | 0.828627 | 8.094841e-55 | -8.615850e-47 |
Msa0973280 | Msa1462660 | 0.831169 | 1.943893e-55 | -8.615850e-47 |
Msa0975940 | Msa1462660 | 0.828173 | 1.041310e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1462660 | MtrunA17_Chr3g0098731 | 94.483 | 145 | 7 | 1 | 1 | 145 | 1 | 144 | 8.61e-96 | 284 |
Msa1462660 | MtrunA17_Chr2g0329801 | 37.634 | 93 | 53 | 1 | 26 | 113 | 15 | 107 | 1.02e-14 | 70.1 |
Msa1462660 | MtrunA17_Chr8g0343481 | 42.045 | 88 | 46 | 2 | 26 | 108 | 59 | 146 | 2.09e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1462660 | AT4G26990.1 | 51.282 | 117 | 54 | 2 | 28 | 141 | 23 | 139 | 3.93e-30 | 113 |
Msa1462660 | AT5G54920.1 | 55.670 | 97 | 42 | 1 | 24 | 120 | 23 | 118 | 6.35e-28 | 107 |
Msa1462660 | AT5G54920.2 | 55.670 | 97 | 42 | 1 | 24 | 120 | 23 | 118 | 7.03e-28 | 107 |
Msa1462660 | AT3G14010.2 | 32.540 | 126 | 79 | 3 | 22 | 141 | 42 | 167 | 1.50e-13 | 67.0 |
Msa1462660 | AT3G14010.3 | 32.540 | 126 | 79 | 3 | 22 | 141 | 42 | 167 | 1.50e-13 | 67.0 |
Msa1462660 | AT3G14010.1 | 32.540 | 126 | 79 | 3 | 22 | 141 | 42 | 167 | 1.50e-13 | 67.0 |
Msa1462660 | AT3G14010.5 | 32.540 | 126 | 79 | 3 | 22 | 141 | 50 | 175 | 1.69e-13 | 67.0 |
Msa1462660 | AT3G14010.4 | 31.405 | 121 | 78 | 2 | 26 | 141 | 47 | 167 | 3.37e-13 | 65.9 |
Msa1462660 | AT1G54170.1 | 41.463 | 82 | 47 | 1 | 28 | 108 | 52 | 133 | 6.66e-12 | 62.4 |
Find 31 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGTGGCCCTTTCCCTTCT+TGG | 0.139919 | tig0042499:-2957 | Msa1462660:intergenic |
TCTTATATTATTCTTGATCT+TGG | 0.253967 | tig0042499:-1626 | Msa1462660:intergenic |
AAAGATGGTTCTGTATATTC+TGG | 0.315916 | tig0042499:+1853 | Msa1462660:CDS |
CTTTCCCTTCTTGGTCATCC+TGG | 0.330841 | tig0042499:-2948 | Msa1462660:intergenic |
CTTATATTATTCTTGATCTT+GGG | 0.338701 | tig0042499:-1625 | Msa1462660:intergenic |
GCTTCTACTGAATCAAATTT+CGG | 0.340165 | tig0042499:+1889 | Msa1462660:CDS |
GCAATCACTATGAGTATCAT+TGG | 0.355991 | tig0042499:+1808 | Msa1462660:CDS |
TAGTGTGATCCTCTTTCAAC+AGG | 0.417155 | tig0042499:-1741 | Msa1462660:intergenic |
TAATGTTGGAAACGAGGCTT+TGG | 0.424920 | tig0042499:+2979 | Msa1462660:CDS |
TCATTCGATGGATGCAGAAC+AGG | 0.436007 | tig0042499:+3249 | Msa1462660:CDS |
TCTTTAACATGAACATCAAC+AGG | 0.455843 | tig0042499:-1835 | Msa1462660:intergenic |
GGTGTTGGTGGAAATATAAC+TGG | 0.474384 | tig0042499:+3181 | Msa1462660:CDS |
CAGAACAGGTTAATCAATCA+AGG | 0.496832 | tig0042499:+3263 | Msa1462660:CDS |
GTTGATGTTCATGTTAAAGA+TGG | 0.497939 | tig0042499:+1838 | Msa1462660:CDS |
TTCTGCTGATAGTCATTCGA+TGG | 0.515820 | tig0042499:+3237 | Msa1462660:CDS |
AGGATGACCAAGAAGGGAAA+GGG | 0.530876 | tig0042499:+2950 | Msa1462660:CDS |
GGAAAGGGCCACAGTAATGT+TGG | 0.532813 | tig0042499:+2965 | Msa1462660:CDS |
CAAGCCAGGATGACCAAGAA+GGG | 0.541510 | tig0042499:+2944 | Msa1462660:CDS |
TCTCGTGCAAGTTGTTGCTA+AGG | 0.543098 | tig0042499:+3030 | Msa1462660:CDS |
AAATATAACTGGTGATTATG+AGG | 0.545568 | tig0042499:+3192 | Msa1462660:CDS |
CTTCCTGCGGATGGTGTTGG+TGG | 0.547917 | tig0042499:+3169 | Msa1462660:CDS |
GGAGTAACGCTTCCTGCGGA+TGG | 0.559418 | tig0042499:+3160 | Msa1462660:CDS |
ACGCTTCCTGCGGATGGTGT+TGG | 0.563729 | tig0042499:+3166 | Msa1462660:CDS |
GCAAGCCAGGATGACCAAGA+AGG | 0.563977 | tig0042499:+2943 | Msa1462660:CDS |
CAGGATGACCAAGAAGGGAA+AGG | 0.575238 | tig0042499:+2949 | Msa1462660:CDS |
GGCTTTGGTAGATACACTAG+TGG | 0.635944 | tig0042499:+2994 | Msa1462660:CDS |
TTTCCACCAACACCATCCGC+AGG | 0.642982 | tig0042499:-3172 | Msa1462660:intergenic |
CCACAGTAATGTTGGAAACG+AGG | 0.647305 | tig0042499:+2973 | Msa1462660:CDS |
GTAGGGAGTAACGCTTCCTG+CGG | 0.668676 | tig0042499:+3156 | Msa1462660:intron |
CCTCGTTTCCAACATTACTG+TGG | 0.694545 | tig0042499:-2973 | Msa1462660:intergenic |
TGAGGAAGCAGTTACACACG+AGG | 0.710029 | tig0042499:+3210 | Msa1462660:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTATATTTTTACTGAATT+AGG | - | tig0042499:2630-2649 | Msa1462660:intergenic | 10.0% |
!!! | ATTTATATTTTTACTGAATT+AGG | - | tig0042499:2630-2649 | Msa1462660:intergenic | 10.0% |
!! | AAGAAATGAATGAAAAAAAA+AGG | - | tig0042499:1919-1938 | Msa1462660:intergenic | 15.0% |
!!! | TTCTTAACCTTTTTTTTTTT+AGG | + | tig0042499:1934-1953 | Msa1462660:intron | 15.0% |
!! | CAAATTTCCTAAAAAAAAAA+AGG | - | tig0042499:1944-1963 | Msa1462660:intergenic | 15.0% |
!!! | GTGAAAAAATTTCATTTTTT+TGG | + | tig0042499:2005-2024 | Msa1462660:intron | 15.0% |
!!! | AAATTTTCCATTTTTCTTAT+CGG | + | tig0042499:2690-2709 | Msa1462660:intron | 15.0% |
!!! | TAACCTTTTTAATTTTTGTT+TGG | + | tig0042499:2833-2852 | Msa1462660:intron | 15.0% |
!! | ATACCAAACAAAAATTAAAA+AGG | - | tig0042499:2839-2858 | Msa1462660:intergenic | 15.0% |
!! | AAGAAATGAATGAAAAAAAA+AGG | - | tig0042499:1919-1938 | Msa1462660:intergenic | 15.0% |
!!! | TTCTTAACCTTTTTTTTTTT+AGG | + | tig0042499:1934-1953 | Msa1462660:intron | 15.0% |
!! | CAAATTTCCTAAAAAAAAAA+AGG | - | tig0042499:1944-1963 | Msa1462660:intergenic | 15.0% |
!!! | GTGAAAAAATTTCATTTTTT+TGG | + | tig0042499:2005-2024 | Msa1462660:intron | 15.0% |
!!! | AAATTTTCCATTTTTCTTAT+CGG | + | tig0042499:2690-2709 | Msa1462660:intron | 15.0% |
!!! | TAACCTTTTTAATTTTTGTT+TGG | + | tig0042499:2833-2852 | Msa1462660:intron | 15.0% |
!! | ATACCAAACAAAAATTAAAA+AGG | - | tig0042499:2839-2858 | Msa1462660:intergenic | 15.0% |
!! | CTTATATTATTCTTGATCTT+GGG | - | tig0042499:1628-1647 | Msa1206520:intergenic | 20.0% |
!! | TCTTATATTATTCTTGATCT+TGG | - | tig0042499:1629-1648 | Msa1206520:intergenic | 20.0% |
!! | TAAAAACTATCAACTCTATT+AGG | - | tig0042499:2126-2145 | Msa1462660:intergenic | 20.0% |
!!! | TAATAGAGTTGATAGTTTTT+AGG | + | tig0042499:2125-2144 | Msa1462660:intron | 20.0% |
!! | TTGTTATCTATGAAAATCTT+AGG | + | tig0042499:2169-2188 | Msa1462660:intron | 20.0% |
!! | TGTTATCTATGAAAATCTTA+GGG | + | tig0042499:2170-2189 | Msa1462660:intron | 20.0% |
!! | ATTAATCAAGTAAATGGAAA+TGG | - | tig0042499:2376-2395 | Msa1462660:intergenic | 20.0% |
!!! | ATGGAAAATTTTAAAAACGA+AGG | - | tig0042499:2681-2700 | Msa1462660:intergenic | 20.0% |
!! | ATTAAAAAGGTTAACAATCT+AGG | - | tig0042499:2826-2845 | Msa1462660:intergenic | 20.0% |
!! | AGAATATAACTATGTTCTTA+AGG | + | tig0042499:3110-3129 | Msa1462660:intron | 20.0% |
!! | CTTATATTATTCTTGATCTT+GGG | - | tig0042499:1628-1647 | Msa1462660:intergenic | 20.0% |
!! | TCTTATATTATTCTTGATCT+TGG | - | tig0042499:1629-1648 | Msa1462660:intergenic | 20.0% |
!! | TAAAAACTATCAACTCTATT+AGG | - | tig0042499:2126-2145 | Msa1462660:intergenic | 20.0% |
!!! | TAATAGAGTTGATAGTTTTT+AGG | + | tig0042499:2125-2144 | Msa1462660:intron | 20.0% |
!! | TTGTTATCTATGAAAATCTT+AGG | + | tig0042499:2169-2188 | Msa1462660:intron | 20.0% |
!! | TGTTATCTATGAAAATCTTA+GGG | + | tig0042499:2170-2189 | Msa1462660:intron | 20.0% |
!! | ATTAATCAAGTAAATGGAAA+TGG | - | tig0042499:2376-2395 | Msa1462660:intergenic | 20.0% |
!!! | ATGGAAAATTTTAAAAACGA+AGG | - | tig0042499:2681-2700 | Msa1462660:intergenic | 20.0% |
!! | ATTAAAAAGGTTAACAATCT+AGG | - | tig0042499:2826-2845 | Msa1462660:intergenic | 20.0% |
!! | AGAATATAACTATGTTCTTA+AGG | + | tig0042499:3110-3129 | Msa1462660:intron | 20.0% |
!!! | TTCAATCATCAATTTTGAGA+TGG | + | tig0042499:1702-1721 | Msa1462660:exon | 25.0% |
!!! | TCAATCATCAATTTTGAGAT+GGG | + | tig0042499:1703-1722 | Msa1462660:exon | 25.0% |
! | TATTTACTCAATAGCTCAAT+TGG | + | tig0042499:1979-1998 | Msa1462660:intron | 25.0% |
! | ATTTACTCAATAGCTCAATT+GGG | + | tig0042499:1980-1999 | Msa1462660:intron | 25.0% |
!! | AATTGTGTGTAATTTTCATC+TGG | + | tig0042499:2062-2081 | Msa1462660:intron | 25.0% |
!! | ATTGTGTGTAATTTTCATCT+GGG | + | tig0042499:2063-2082 | Msa1462660:intron | 25.0% |
!!! | AAGTACATATTCTGAAGTAT+CGG | - | tig0042499:2268-2287 | Msa1462660:intergenic | 25.0% |
!! | TTTTTACTGTATTAACTACC+AGG | - | tig0042499:2400-2419 | Msa1462660:intergenic | 25.0% |
!!! | CTTGATTTTGATGAAAATAG+TGG | + | tig0042499:2482-2501 | Msa1462660:intron | 25.0% |
!!! | ATATTTTTACTGAATTAGGC+TGG | - | tig0042499:2626-2645 | Msa1462660:intergenic | 25.0% |
! | ATGAGAATAGCATTAGTAAT+AGG | + | tig0042499:2791-2810 | Msa1462660:intron | 25.0% |
! | TAACTATGTTCTTAAGGTTA+AGG | + | tig0042499:3116-3135 | Msa1462660:intron | 25.0% |
! | AAATATAACTGGTGATTATG+AGG | + | tig0042499:3192-3211 | Msa1462660:CDS | 25.0% |
!!! | TTCAATCATCAATTTTGAGA+TGG | + | tig0042499:1702-1721 | Msa1462660:exon | 25.0% |
!!! | TCAATCATCAATTTTGAGAT+GGG | + | tig0042499:1703-1722 | Msa1462660:exon | 25.0% |
! | TATTTACTCAATAGCTCAAT+TGG | + | tig0042499:1979-1998 | Msa1462660:intron | 25.0% |
! | ATTTACTCAATAGCTCAATT+GGG | + | tig0042499:1980-1999 | Msa1462660:intron | 25.0% |
!! | AATTGTGTGTAATTTTCATC+TGG | + | tig0042499:2062-2081 | Msa1462660:intron | 25.0% |
!! | ATTGTGTGTAATTTTCATCT+GGG | + | tig0042499:2063-2082 | Msa1462660:intron | 25.0% |
!!! | AAGTACATATTCTGAAGTAT+CGG | - | tig0042499:2268-2287 | Msa1462660:intergenic | 25.0% |
!! | TTTTTACTGTATTAACTACC+AGG | - | tig0042499:2400-2419 | Msa1462660:intergenic | 25.0% |
!!! | CTTGATTTTGATGAAAATAG+TGG | + | tig0042499:2482-2501 | Msa1462660:intron | 25.0% |
!!! | ATATTTTTACTGAATTAGGC+TGG | - | tig0042499:2626-2645 | Msa1462660:intergenic | 25.0% |
! | ATGAGAATAGCATTAGTAAT+AGG | + | tig0042499:2791-2810 | Msa1462660:intron | 25.0% |
! | TAACTATGTTCTTAAGGTTA+AGG | + | tig0042499:3116-3135 | Msa1462660:intron | 25.0% |
! | AAATATAACTGGTGATTATG+AGG | + | tig0042499:3192-3211 | Msa1462660:CDS | 25.0% |
AAAAACGAGAATGGTTATGA+TGG | - | tig0042499:1658-1677 | Msa1206520:intergenic | 30.0% | |
AAAAAAGAACCTGTTGAAAG+AGG | + | tig0042499:1732-1751 | Msa1462660:CDS | 30.0% | |
TCTTTAACATGAACATCAAC+AGG | - | tig0042499:1838-1857 | Msa1462660:intergenic | 30.0% | |
GTTGATGTTCATGTTAAAGA+TGG | + | tig0042499:1838-1857 | Msa1462660:CDS | 30.0% | |
! | AAAGATGGTTCTGTATATTC+TGG | + | tig0042499:1853-1872 | Msa1462660:CDS | 30.0% |
GCTTCTACTGAATCAAATTT+CGG | + | tig0042499:1889-1908 | Msa1462660:CDS | 30.0% | |
! | TTGTGTGTAATTTTCATCTG+GGG | + | tig0042499:2064-2083 | Msa1462660:intron | 30.0% |
!! | ATGTACTTGTCTCTGAAATA+TGG | + | tig0042499:2280-2299 | Msa1462660:intron | 30.0% |
!! | TGTACTTGTCTCTGAAATAT+GGG | + | tig0042499:2281-2300 | Msa1462660:intron | 30.0% |
AAATATGGGTACTCCTAAAA+TGG | + | tig0042499:2295-2314 | Msa1462660:intron | 30.0% | |
TCAAGTAAATGGAAATGGTT+CGG | - | tig0042499:2371-2390 | Msa1462660:intergenic | 30.0% | |
CCAGGAATTAATCAAGTAAA+TGG | - | tig0042499:2382-2401 | Msa1462660:intergenic | 30.0% | |
CCATTTACTTGATTAATTCC+TGG | + | tig0042499:2379-2398 | Msa1462660:intron | 30.0% | |
!! | GATTTTGATGAAAATAGTGG+AGG | + | tig0042499:2485-2504 | Msa1462660:intron | 30.0% |
!! | AAATCTCTGAAGCATGATAA+TGG | + | tig0042499:2526-2545 | Msa1462660:intron | 30.0% |
TGTATAACAGATTCAAGTGT+GGG | - | tig0042499:2867-2886 | Msa1462660:intergenic | 30.0% | |
TTGTATAACAGATTCAAGTG+TGG | - | tig0042499:2868-2887 | Msa1462660:intergenic | 30.0% | |
CTAAACATGCAACAAAGTAA+GGG | - | tig0042499:2910-2929 | Msa1462660:intergenic | 30.0% | |
CTTACTTTGTTGCATGTTTA+GGG | + | tig0042499:2909-2928 | Msa1462660:intron | 30.0% | |
! | TACATGTGATTTTGTGTGTA+GGG | + | tig0042499:3139-3158 | Msa1462660:intron | 30.0% |
AAAAACGAGAATGGTTATGA+TGG | - | tig0042499:1658-1677 | Msa1462660:intergenic | 30.0% | |
AAAAAAGAACCTGTTGAAAG+AGG | + | tig0042499:1732-1751 | Msa1462660:CDS | 30.0% | |
TCTTTAACATGAACATCAAC+AGG | - | tig0042499:1838-1857 | Msa1462660:intergenic | 30.0% | |
GTTGATGTTCATGTTAAAGA+TGG | + | tig0042499:1838-1857 | Msa1462660:CDS | 30.0% | |
! | AAAGATGGTTCTGTATATTC+TGG | + | tig0042499:1853-1872 | Msa1462660:CDS | 30.0% |
GCTTCTACTGAATCAAATTT+CGG | + | tig0042499:1889-1908 | Msa1462660:CDS | 30.0% | |
! | TTGTGTGTAATTTTCATCTG+GGG | + | tig0042499:2064-2083 | Msa1462660:intron | 30.0% |
!! | ATGTACTTGTCTCTGAAATA+TGG | + | tig0042499:2280-2299 | Msa1462660:intron | 30.0% |
!! | TGTACTTGTCTCTGAAATAT+GGG | + | tig0042499:2281-2300 | Msa1462660:intron | 30.0% |
AAATATGGGTACTCCTAAAA+TGG | + | tig0042499:2295-2314 | Msa1462660:intron | 30.0% | |
TCAAGTAAATGGAAATGGTT+CGG | - | tig0042499:2371-2390 | Msa1462660:intergenic | 30.0% | |
CCAGGAATTAATCAAGTAAA+TGG | - | tig0042499:2382-2401 | Msa1462660:intergenic | 30.0% | |
CCATTTACTTGATTAATTCC+TGG | + | tig0042499:2379-2398 | Msa1462660:intron | 30.0% | |
!! | GATTTTGATGAAAATAGTGG+AGG | + | tig0042499:2485-2504 | Msa1462660:intron | 30.0% |
!! | AAATCTCTGAAGCATGATAA+TGG | + | tig0042499:2526-2545 | Msa1462660:intron | 30.0% |
TGTATAACAGATTCAAGTGT+GGG | - | tig0042499:2867-2886 | Msa1462660:intergenic | 30.0% | |
TTGTATAACAGATTCAAGTG+TGG | - | tig0042499:2868-2887 | Msa1462660:intergenic | 30.0% | |
CTAAACATGCAACAAAGTAA+GGG | - | tig0042499:2910-2929 | Msa1462660:intergenic | 30.0% | |
CTTACTTTGTTGCATGTTTA+GGG | + | tig0042499:2909-2928 | Msa1462660:intron | 30.0% | |
! | TACATGTGATTTTGTGTGTA+GGG | + | tig0042499:3139-3158 | Msa1462660:intron | 30.0% |
GAAAGATGCAAAAACGAGAA+TGG | - | tig0042499:1667-1686 | Msa1206520:intergenic | 35.0% | |
GCAATCACTATGAGTATCAT+TGG | + | tig0042499:1808-1827 | Msa1462660:CDS | 35.0% | |
! | TTTGATGAAAATAGTGGAGG+CGG | + | tig0042499:2488-2507 | Msa1462660:intron | 35.0% |
! | TGGAAGTGTGGTTAAATACA+TGG | + | tig0042499:2546-2565 | Msa1462660:intron | 35.0% |
AACAAGTTCCTATGATGCAT+AGG | - | tig0042499:2742-2761 | Msa1462660:intergenic | 35.0% | |
CCTAAACATGCAACAAAGTA+AGG | - | tig0042499:2911-2930 | Msa1462660:intergenic | 35.0% | |
CCTTACTTTGTTGCATGTTT+AGG | + | tig0042499:2908-2927 | Msa1462660:intron | 35.0% | |
! | GTACATGTGATTTTGTGTGT+AGG | + | tig0042499:3138-3157 | Msa1462660:intron | 35.0% |
GAAAGATGCAAAAACGAGAA+TGG | - | tig0042499:1667-1686 | Msa1462660:intergenic | 35.0% | |
GCAATCACTATGAGTATCAT+TGG | + | tig0042499:1808-1827 | Msa1462660:CDS | 35.0% | |
! | TTTGATGAAAATAGTGGAGG+CGG | + | tig0042499:2488-2507 | Msa1462660:intron | 35.0% |
! | TGGAAGTGTGGTTAAATACA+TGG | + | tig0042499:2546-2565 | Msa1462660:intron | 35.0% |
AACAAGTTCCTATGATGCAT+AGG | - | tig0042499:2742-2761 | Msa1462660:intergenic | 35.0% | |
CCTAAACATGCAACAAAGTA+AGG | - | tig0042499:2911-2930 | Msa1462660:intergenic | 35.0% | |
CCTTACTTTGTTGCATGTTT+AGG | + | tig0042499:2908-2927 | Msa1462660:intron | 35.0% | |
! | GTACATGTGATTTTGTGTGT+AGG | + | tig0042499:3138-3157 | Msa1462660:intron | 35.0% |
TAGTGTGATCCTCTTTCAAC+AGG | - | tig0042499:1744-1763 | Msa1462660:intergenic | 40.0% | |
! | TGTGTAATTTTCATCTGGGG+TGG | + | tig0042499:2067-2086 | Msa1462660:intron | 40.0% |
! | TACGGGTGTTTCACCATTTT+AGG | - | tig0042499:2311-2330 | Msa1462660:intergenic | 40.0% |
GTACTGTATGTATGCATACC+CGG | - | tig0042499:2334-2353 | Msa1462660:intergenic | 40.0% | |
!! | GAAGCATGATAATGGAAGTG+TGG | + | tig0042499:2534-2553 | Msa1462660:intron | 40.0% |
!! | ACGGGTACCGATAAGAAAAA+TGG | - | tig0042499:2700-2719 | Msa1462660:intergenic | 40.0% |
TTCCTATGATGCATAGGTAC+GGG | - | tig0042499:2736-2755 | Msa1462660:intergenic | 40.0% | |
GTTCCTATGATGCATAGGTA+CGG | - | tig0042499:2737-2756 | Msa1462660:intergenic | 40.0% | |
CAGAAGTTTCTTTGACTGCT+GGG | + | tig0042499:2767-2786 | Msa1462660:intron | 40.0% | |
GCATTAGTAATAGGCAAAGC+AGG | + | tig0042499:2800-2819 | Msa1462660:intron | 40.0% | |
TAATGTTGGAAACGAGGCTT+TGG | + | tig0042499:2979-2998 | Msa1462660:CDS | 40.0% | |
GCATGACACAAGATTACGAA+TGG | - | tig0042499:3060-3079 | Msa1462660:intergenic | 40.0% | |
!! | GGTGTTGGTGGAAATATAAC+TGG | + | tig0042499:3181-3200 | Msa1462660:CDS | 40.0% |
TTCTGCTGATAGTCATTCGA+TGG | + | tig0042499:3237-3256 | Msa1462660:CDS | 40.0% | |
GCAGAACAGGTTAATCAATC+AGG | + | tig0042499:3262-3281 | Msa1462660:CDS | 40.0% | |
TAGTGTGATCCTCTTTCAAC+AGG | - | tig0042499:1744-1763 | Msa1462660:intergenic | 40.0% | |
! | TGTGTAATTTTCATCTGGGG+TGG | + | tig0042499:2067-2086 | Msa1462660:intron | 40.0% |
! | TACGGGTGTTTCACCATTTT+AGG | - | tig0042499:2311-2330 | Msa1462660:intergenic | 40.0% |
GTACTGTATGTATGCATACC+CGG | - | tig0042499:2334-2353 | Msa1462660:intergenic | 40.0% | |
!! | GAAGCATGATAATGGAAGTG+TGG | + | tig0042499:2534-2553 | Msa1462660:intron | 40.0% |
!! | ACGGGTACCGATAAGAAAAA+TGG | - | tig0042499:2700-2719 | Msa1462660:intergenic | 40.0% |
TTCCTATGATGCATAGGTAC+GGG | - | tig0042499:2736-2755 | Msa1462660:intergenic | 40.0% | |
GTTCCTATGATGCATAGGTA+CGG | - | tig0042499:2737-2756 | Msa1462660:intergenic | 40.0% | |
CAGAAGTTTCTTTGACTGCT+GGG | + | tig0042499:2767-2786 | Msa1462660:intron | 40.0% | |
GCATTAGTAATAGGCAAAGC+AGG | + | tig0042499:2800-2819 | Msa1462660:intron | 40.0% | |
TAATGTTGGAAACGAGGCTT+TGG | + | tig0042499:2979-2998 | Msa1462660:CDS | 40.0% | |
GCATGACACAAGATTACGAA+TGG | - | tig0042499:3060-3079 | Msa1462660:intergenic | 40.0% | |
!! | GGTGTTGGTGGAAATATAAC+TGG | + | tig0042499:3181-3200 | Msa1462660:CDS | 40.0% |
TTCTGCTGATAGTCATTCGA+TGG | + | tig0042499:3237-3256 | Msa1462660:CDS | 40.0% | |
AAATGGTGAAACACCCGTAC+CGG | + | tig0042499:2312-2331 | Msa1462660:intron | 45.0% | |
TATGTATGCATACCCGGTAC+GGG | - | tig0042499:2328-2347 | Msa1462660:intergenic | 45.0% | |
GTATGTATGCATACCCGGTA+CGG | - | tig0042499:2329-2348 | Msa1462660:intergenic | 45.0% | |
ATGATGCATAGGTACGGGTT+CGG | - | tig0042499:2731-2750 | Msa1462660:intergenic | 45.0% | |
AACCCGTACCTATGCATCAT+AGG | + | tig0042499:2731-2750 | Msa1462660:intron | 45.0% | |
GCAGTCAAAGAAACTTCTGG+TGG | - | tig0042499:2766-2785 | Msa1462660:intergenic | 45.0% | |
CCAGCAGTCAAAGAAACTTC+TGG | - | tig0042499:2769-2788 | Msa1462660:intergenic | 45.0% | |
CCAGAAGTTTCTTTGACTGC+TGG | + | tig0042499:2766-2785 | Msa1462660:intron | 45.0% | |
!!! | GGATTGTTTTGAAGCAAGCC+AGG | + | tig0042499:2930-2949 | Msa1462660:CDS | 45.0% |
AGGATGACCAAGAAGGGAAA+GGG | + | tig0042499:2950-2969 | Msa1462660:CDS | 45.0% | |
CCTCGTTTCCAACATTACTG+TGG | - | tig0042499:2976-2995 | Msa1462660:intergenic | 45.0% | |
CCACAGTAATGTTGGAAACG+AGG | + | tig0042499:2973-2992 | Msa1462660:CDS | 45.0% | |
! | GGCTTTGGTAGATACACTAG+TGG | + | tig0042499:2994-3013 | Msa1462660:CDS | 45.0% |
TCTCGTGCAAGTTGTTGCTA+AGG | + | tig0042499:3030-3049 | Msa1462660:CDS | 45.0% | |
TCATTCGATGGATGCAGAAC+AGG | + | tig0042499:3249-3268 | Msa1462660:CDS | 45.0% | |
AAATGGTGAAACACCCGTAC+CGG | + | tig0042499:2312-2331 | Msa1462660:intron | 45.0% | |
TATGTATGCATACCCGGTAC+GGG | - | tig0042499:2328-2347 | Msa1462660:intergenic | 45.0% | |
GTATGTATGCATACCCGGTA+CGG | - | tig0042499:2329-2348 | Msa1462660:intergenic | 45.0% | |
ATGATGCATAGGTACGGGTT+CGG | - | tig0042499:2731-2750 | Msa1462660:intergenic | 45.0% | |
AACCCGTACCTATGCATCAT+AGG | + | tig0042499:2731-2750 | Msa1462660:intron | 45.0% | |
GCAGTCAAAGAAACTTCTGG+TGG | - | tig0042499:2766-2785 | Msa1462660:intergenic | 45.0% | |
CCAGCAGTCAAAGAAACTTC+TGG | - | tig0042499:2769-2788 | Msa1462660:intergenic | 45.0% | |
CCAGAAGTTTCTTTGACTGC+TGG | + | tig0042499:2766-2785 | Msa1462660:intron | 45.0% | |
!!! | GGATTGTTTTGAAGCAAGCC+AGG | + | tig0042499:2930-2949 | Msa1462660:CDS | 45.0% |
AGGATGACCAAGAAGGGAAA+GGG | + | tig0042499:2950-2969 | Msa1462660:CDS | 45.0% | |
CCTCGTTTCCAACATTACTG+TGG | - | tig0042499:2976-2995 | Msa1462660:intergenic | 45.0% | |
CCACAGTAATGTTGGAAACG+AGG | + | tig0042499:2973-2992 | Msa1462660:CDS | 45.0% | |
! | GGCTTTGGTAGATACACTAG+TGG | + | tig0042499:2994-3013 | Msa1462660:CDS | 45.0% |
TCTCGTGCAAGTTGTTGCTA+AGG | + | tig0042499:3030-3049 | Msa1462660:CDS | 45.0% | |
TCATTCGATGGATGCAGAAC+AGG | + | tig0042499:3249-3268 | Msa1462660:CDS | 45.0% | |
AATGGTGAAACACCCGTACC+GGG | + | tig0042499:2313-2332 | Msa1462660:intron | 50.0% | |
! | GATGAAAATAGTGGAGGCGG+TGG | + | tig0042499:2491-2510 | Msa1462660:intron | 50.0% |
CAAGCCAGGATGACCAAGAA+GGG | + | tig0042499:2944-2963 | Msa1462660:CDS | 50.0% | |
CTTTCCCTTCTTGGTCATCC+TGG | - | tig0042499:2951-2970 | Msa1462660:intergenic | 50.0% | |
CAGGATGACCAAGAAGGGAA+AGG | + | tig0042499:2949-2968 | Msa1462660:CDS | 50.0% | |
GGAAAGGGCCACAGTAATGT+TGG | + | tig0042499:2965-2984 | Msa1462660:CDS | 50.0% | |
TGAGGAAGCAGTTACACACG+AGG | + | tig0042499:3210-3229 | Msa1462660:CDS | 50.0% | |
AATGGTGAAACACCCGTACC+GGG | + | tig0042499:2313-2332 | Msa1462660:intron | 50.0% | |
! | GATGAAAATAGTGGAGGCGG+TGG | + | tig0042499:2491-2510 | Msa1462660:intron | 50.0% |
CAAGCCAGGATGACCAAGAA+GGG | + | tig0042499:2944-2963 | Msa1462660:CDS | 50.0% | |
CTTTCCCTTCTTGGTCATCC+TGG | - | tig0042499:2951-2970 | Msa1462660:intergenic | 50.0% | |
CAGGATGACCAAGAAGGGAA+AGG | + | tig0042499:2949-2968 | Msa1462660:CDS | 50.0% | |
GGAAAGGGCCACAGTAATGT+TGG | + | tig0042499:2965-2984 | Msa1462660:CDS | 50.0% | |
TGAGGAAGCAGTTACACACG+AGG | + | tig0042499:3210-3229 | Msa1462660:CDS | 50.0% | |
ATAGGTACGGGTTCGGCACT+CGG | - | tig0042499:2724-2743 | Msa1462660:intergenic | 55.0% | |
GCAAGCCAGGATGACCAAGA+AGG | + | tig0042499:2943-2962 | Msa1462660:CDS | 55.0% | |
ACTGTGGCCCTTTCCCTTCT+TGG | - | tig0042499:2960-2979 | Msa1462660:intergenic | 55.0% | |
GTAGGGAGTAACGCTTCCTG+CGG | + | tig0042499:3156-3175 | Msa1462660:intron | 55.0% | |
TTTCCACCAACACCATCCGC+AGG | - | tig0042499:3175-3194 | Msa1462660:intergenic | 55.0% | |
ATAGGTACGGGTTCGGCACT+CGG | - | tig0042499:2724-2743 | Msa1462660:intergenic | 55.0% | |
GCAAGCCAGGATGACCAAGA+AGG | + | tig0042499:2943-2962 | Msa1462660:CDS | 55.0% | |
ACTGTGGCCCTTTCCCTTCT+TGG | - | tig0042499:2960-2979 | Msa1462660:intergenic | 55.0% | |
GTAGGGAGTAACGCTTCCTG+CGG | + | tig0042499:3156-3175 | Msa1462660:intron | 55.0% | |
TTTCCACCAACACCATCCGC+AGG | - | tig0042499:3175-3194 | Msa1462660:intergenic | 55.0% | |
TACGGGTTCGGCACTCGGTA+CGG | - | tig0042499:2719-2738 | Msa1462660:intergenic | 60.0% | |
GGAGTAACGCTTCCTGCGGA+TGG | + | tig0042499:3160-3179 | Msa1462660:CDS | 60.0% | |
ACGCTTCCTGCGGATGGTGT+TGG | + | tig0042499:3166-3185 | Msa1462660:CDS | 60.0% | |
! | CTTCCTGCGGATGGTGTTGG+TGG | + | tig0042499:3169-3188 | Msa1462660:CDS | 60.0% |
TACGGGTTCGGCACTCGGTA+CGG | - | tig0042499:2719-2738 | Msa1462660:intergenic | 60.0% | |
GGAGTAACGCTTCCTGCGGA+TGG | + | tig0042499:3160-3179 | Msa1462660:CDS | 60.0% | |
ACGCTTCCTGCGGATGGTGT+TGG | + | tig0042499:3166-3185 | Msa1462660:CDS | 60.0% | |
! | CTTCCTGCGGATGGTGTTGG+TGG | + | tig0042499:3169-3188 | Msa1462660:CDS | 60.0% |
ACGGGTTCGGCACTCGGTAC+GGG | - | tig0042499:2718-2737 | Msa1462660:intergenic | 65.0% | |
ACGGGTTCGGCACTCGGTAC+GGG | - | tig0042499:2718-2737 | Msa1462660:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0042499 | gene | 1607 | 3282 | 1607 | ID=Msa1462660;Name=Msa1462660 |
tig0042499 | mRNA | 1607 | 3282 | 1607 | ID=Msa1462660-mRNA-1;Parent=Msa1462660;Name=Msa1462660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=114|1|0.66|1|1|1|3|0|145 |
tig0042499 | exon | 1607 | 1910 | 1607 | ID=Msa1462660-mRNA-1:exon:23762;Parent=Msa1462660-mRNA-1 |
tig0042499 | exon | 2930 | 3051 | 2930 | ID=Msa1462660-mRNA-1:exon:23763;Parent=Msa1462660-mRNA-1 |
tig0042499 | exon | 3160 | 3282 | 3160 | ID=Msa1462660-mRNA-1:exon:23764;Parent=Msa1462660-mRNA-1 |
tig0042499 | five_prime_UTR | 1607 | 1720 | 1607 | ID=Msa1462660-mRNA-1:five_prime_utr;Parent=Msa1462660-mRNA-1 |
tig0042499 | CDS | 1721 | 1910 | 1721 | ID=Msa1462660-mRNA-1:cds;Parent=Msa1462660-mRNA-1 |
tig0042499 | CDS | 2930 | 3051 | 2930 | ID=Msa1462660-mRNA-1:cds;Parent=Msa1462660-mRNA-1 |
tig0042499 | CDS | 3160 | 3282 | 3160 | ID=Msa1462660-mRNA-1:cds;Parent=Msa1462660-mRNA-1 |
Gene Sequence |
Protein sequence |