Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174910 | sp|Q9C9C0|SPPA1_ARATH | 57.647 | 170 | 63 | 4 | 137 | 297 | 441 | 610 | 4.55e-44 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174910 | A0A396GLK3 | 82.967 | 182 | 27 | 1 | 137 | 314 | 5 | 186 | 1.87e-99 | 300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002240 | Msa1174910 | 0.810311 | 1.227548e-50 | -8.615850e-47 |
| Msa0003890 | Msa1174910 | 0.804404 | 2.196114e-49 | -8.615850e-47 |
| Msa0011660 | Msa1174910 | -0.810008 | 1.427001e-50 | -8.615850e-47 |
| Msa0018650 | Msa1174910 | 0.810853 | 9.374080e-51 | -8.615850e-47 |
| Msa0037570 | Msa1174910 | -0.809025 | 2.320337e-50 | -8.615850e-47 |
| Msa0044260 | Msa1174910 | 0.812202 | 4.772898e-51 | -8.615850e-47 |
| Msa0044330 | Msa1174910 | 0.821623 | 3.659329e-53 | -8.615850e-47 |
| Msa0047110 | Msa1174910 | 0.820579 | 6.367897e-53 | -8.615850e-47 |
| Msa0075470 | Msa1174910 | 0.806169 | 9.373182e-50 | -8.615850e-47 |
| Msa0078900 | Msa1174910 | 0.801450 | 8.953326e-49 | -8.615850e-47 |
| Msa0095970 | Msa1174910 | 0.837643 | 4.606613e-57 | -8.615850e-47 |
| Msa0114060 | Msa1174910 | 0.811399 | 7.137049e-51 | -8.615850e-47 |
| Msa0616160 | Msa1174910 | 0.814029 | 1.896516e-51 | -8.615850e-47 |
| Msa0621490 | Msa1174910 | 0.815471 | 9.090495e-52 | -8.615850e-47 |
| Msa0641670 | Msa1174910 | 0.813836 | 2.091657e-51 | -8.615850e-47 |
| Msa0643350 | Msa1174910 | 0.801318 | 9.526468e-49 | -8.615850e-47 |
| Msa0649110 | Msa1174910 | 0.826023 | 3.404743e-54 | -8.615850e-47 |
| Msa0677410 | Msa1174910 | 0.806600 | 7.603817e-50 | -8.615850e-47 |
| Msa0681270 | Msa1174910 | 0.805163 | 1.524227e-49 | -8.615850e-47 |
| Msa0688390 | Msa1174910 | 0.804437 | 2.161548e-49 | -8.615850e-47 |
| Msa0701010 | Msa1174910 | 0.816014 | 6.879853e-52 | -8.615850e-47 |
| Msa0703780 | Msa1174910 | 0.811630 | 6.358245e-51 | -8.615850e-47 |
| Msa0723830 | Msa1174910 | 0.800378 | 1.482270e-48 | -8.615850e-47 |
| Msa0731940 | Msa1174910 | 0.829325 | 5.482280e-55 | -8.615850e-47 |
| Msa0735170 | Msa1174910 | 0.812577 | 3.952162e-51 | -8.615850e-47 |
| Msa0735660 | Msa1174910 | 0.805855 | 1.091036e-49 | -8.615850e-47 |
| Msa0743720 | Msa1174910 | 0.807554 | 4.776204e-50 | -8.615850e-47 |
| Msa0753720 | Msa1174910 | 0.825761 | 3.930922e-54 | -8.615850e-47 |
| Msa0766630 | Msa1174910 | 0.812694 | 3.726971e-51 | -8.615850e-47 |
| Msa0768370 | Msa1174910 | 0.808711 | 2.707410e-50 | -8.615850e-47 |
| Msa0773540 | Msa1174910 | 0.805419 | 1.347044e-49 | -8.615850e-47 |
| Msa0796700 | Msa1174910 | 0.805790 | 1.126053e-49 | -8.615850e-47 |
| Msa0808080 | Msa1174910 | 0.810804 | 9.607233e-51 | -8.615850e-47 |
| Msa0810220 | Msa1174910 | 0.811247 | 7.703002e-51 | -8.615850e-47 |
| Msa0820850 | Msa1174910 | 0.803310 | 3.704800e-49 | -8.615850e-47 |
| Msa0824590 | Msa1174910 | 0.802954 | 4.390908e-49 | -8.615850e-47 |
| Msa0832340 | Msa1174910 | 0.809595 | 1.751269e-50 | -8.615850e-47 |
| Msa0150840 | Msa1174910 | 0.807104 | 5.947870e-50 | -8.615850e-47 |
| Msa0165210 | Msa1174910 | 0.809978 | 1.448039e-50 | -8.615850e-47 |
| Msa0170220 | Msa1174910 | 0.805423 | 1.344353e-49 | -8.615850e-47 |
| Msa0171540 | Msa1174910 | 0.804427 | 2.171688e-49 | -8.615850e-47 |
| Msa0180500 | Msa1174910 | 0.855330 | 6.784339e-62 | -8.615850e-47 |
| Msa0195980 | Msa1174910 | 0.800548 | 1.368720e-48 | -8.615850e-47 |
| Msa0208090 | Msa1174910 | 0.803463 | 3.445260e-49 | -8.615850e-47 |
| Msa0211150 | Msa1174910 | 0.815148 | 1.072185e-51 | -8.615850e-47 |
| Msa0216910 | Msa1174910 | 0.807831 | 4.170241e-50 | -8.615850e-47 |
| Msa0222890 | Msa1174910 | 0.808538 | 2.948273e-50 | -8.615850e-47 |
| Msa0223260 | Msa1174910 | 0.818494 | 1.904119e-52 | -8.615850e-47 |
| Msa0391430 | Msa1174910 | 0.801594 | 8.363745e-49 | -8.615850e-47 |
| Msa0402290 | Msa1174910 | 0.814849 | 1.249400e-51 | -8.615850e-47 |
| Msa0413410 | Msa1174910 | 0.802845 | 4.624325e-49 | -8.615850e-47 |
| Msa0416650 | Msa1174910 | 0.805389 | 1.366680e-49 | -8.615850e-47 |
| Msa0422100 | Msa1174910 | 0.800949 | 1.133589e-48 | -8.615850e-47 |
| Msa0424320 | Msa1174910 | 0.822466 | 2.334104e-53 | -8.615850e-47 |
| Msa0425790 | Msa1174910 | 0.806757 | 7.043789e-50 | -8.615850e-47 |
| Msa0430420 | Msa1174910 | 0.801389 | 9.216550e-49 | -8.615850e-47 |
| Msa0464680 | Msa1174910 | 0.805709 | 1.171212e-49 | -8.615850e-47 |
| Msa0479340 | Msa1174910 | 0.803360 | 3.618940e-49 | -8.615850e-47 |
| Msa0997370 | Msa1174910 | 0.817331 | 3.484849e-52 | -8.615850e-47 |
| Msa0998690 | Msa1174910 | 0.819923 | 9.001040e-53 | -8.615850e-47 |
| Msa0999120 | Msa1174910 | 0.805738 | 1.154646e-49 | -8.615850e-47 |
| Msa1000890 | Msa1174910 | 0.825185 | 5.381267e-54 | -8.615850e-47 |
| Msa1000900 | Msa1174910 | 0.807145 | 5.830134e-50 | -8.615850e-47 |
| Msa1002000 | Msa1174910 | 0.808148 | 3.570588e-50 | -8.615850e-47 |
| Msa1003620 | Msa1174910 | 0.815537 | 8.788667e-52 | -8.615850e-47 |
| Msa1014540 | Msa1174910 | 0.839623 | 1.418290e-57 | -8.615850e-47 |
| Msa1018980 | Msa1174910 | 0.823513 | 1.330306e-53 | -8.615850e-47 |
| Msa1030970 | Msa1174910 | 0.830810 | 2.381424e-55 | -8.615850e-47 |
| Msa1046460 | Msa1174910 | 0.805815 | 1.112312e-49 | -8.615850e-47 |
| Msa1058710 | Msa1174910 | 0.802738 | 4.864061e-49 | -8.615850e-47 |
| Msa1064710 | Msa1174910 | 0.802707 | 4.937989e-49 | -8.615850e-47 |
| Msa1075540 | Msa1174910 | 0.829920 | 3.930211e-55 | -8.615850e-47 |
| Msa1085740 | Msa1174910 | 0.802893 | 4.518557e-49 | -8.615850e-47 |
| Msa1100050 | Msa1174910 | 0.815643 | 8.320317e-52 | -8.615850e-47 |
| Msa1104090 | Msa1174910 | 0.806290 | 8.839328e-50 | -8.615850e-47 |
| Msa0251640 | Msa1174910 | 0.815044 | 1.131079e-51 | -8.615850e-47 |
| Msa0270500 | Msa1174910 | 0.806636 | 7.471042e-50 | -8.615850e-47 |
| Msa0280090 | Msa1174910 | 0.806105 | 9.667705e-50 | -8.615850e-47 |
| Msa0310750 | Msa1174910 | 0.823235 | 1.544846e-53 | -8.615850e-47 |
| Msa0319170 | Msa1174910 | 0.800457 | 1.428360e-48 | -8.615850e-47 |
| Msa0343850 | Msa1174910 | 0.811146 | 8.101044e-51 | -8.615850e-47 |
| Msa0345970 | Msa1174910 | 0.803876 | 2.827168e-49 | -8.615850e-47 |
| Msa0355220 | Msa1174910 | 0.809885 | 1.516709e-50 | -8.615850e-47 |
| Msa0359030 | Msa1174910 | 0.803434 | 3.492874e-49 | -8.615850e-47 |
| Msa1113170 | Msa1174910 | 0.820656 | 6.111542e-53 | -8.615850e-47 |
| Msa1119480 | Msa1174910 | 0.813536 | 2.435826e-51 | -8.615850e-47 |
| Msa1121490 | Msa1174910 | 0.818943 | 1.505853e-52 | -8.615850e-47 |
| Msa1137570 | Msa1174910 | 0.837336 | 5.521467e-57 | -8.615850e-47 |
| Msa1142020 | Msa1174910 | 0.808497 | 3.008318e-50 | -8.615850e-47 |
| Msa1147710 | Msa1174910 | 0.820961 | 5.201492e-53 | -8.615850e-47 |
| Msa1149360 | Msa1174910 | 0.805067 | 1.596031e-49 | -8.615850e-47 |
| Msa1152100 | Msa1174910 | 0.800080 | 1.704785e-48 | -8.615850e-47 |
| Msa1154280 | Msa1174910 | 0.801974 | 6.989939e-49 | -8.615850e-47 |
| Msa1156020 | Msa1174910 | 0.800180 | 1.626238e-48 | -8.615850e-47 |
| Msa1174040 | Msa1174910 | 0.813787 | 2.144977e-51 | -8.615850e-47 |
| Msa1174910 | Msa1181910 | 0.810398 | 1.175624e-50 | -8.615850e-47 |
| Msa1174910 | Msa1184420 | 0.824374 | 8.358085e-54 | -8.615850e-47 |
| Msa1174910 | Msa1186950 | -0.807271 | 5.484389e-50 | -8.615850e-47 |
| Msa1174910 | Msa1188370 | 0.803306 | 3.712706e-49 | -8.615850e-47 |
| Msa1174910 | Msa1210020 | 0.804501 | 2.095726e-49 | -8.615850e-47 |
| Msa1174910 | Msa1213520 | 0.820684 | 6.023734e-53 | -8.615850e-47 |
| Msa1174910 | Msa1226660 | 0.803464 | 3.443808e-49 | -8.615850e-47 |
| Msa1174910 | Msa1227730 | 0.824304 | 8.679782e-54 | -8.615850e-47 |
| Msa1174910 | Msa1228590 | 0.805220 | 1.482847e-49 | -8.615850e-47 |
| Msa1174910 | Msa1232740 | 0.800799 | 1.216593e-48 | -8.615850e-47 |
| Msa1174910 | Msa1238930 | 0.803679 | 3.107221e-49 | -8.615850e-47 |
| Msa1174910 | Msa1246510 | 0.807814 | 4.206111e-50 | -8.615850e-47 |
| Msa1174910 | Msa1252140 | 0.803959 | 2.717893e-49 | -8.615850e-47 |
| Msa1174910 | Msa1260620 | 0.820543 | 6.488230e-53 | -8.615850e-47 |
| Msa1174910 | Msa1276600 | 0.801140 | 1.036335e-48 | -8.615850e-47 |
| Msa1174910 | Msa1276890 | 0.941221 | 6.064653e-101 | -8.615850e-47 |
| Msa1174910 | Msa1277660 | 0.800705 | 1.271269e-48 | -8.615850e-47 |
| Msa1174910 | Msa1284680 | 0.811638 | 6.333210e-51 | -8.615850e-47 |
| Msa1174910 | Msa1286800 | 0.837774 | 4.263235e-57 | -8.615850e-47 |
| Msa1174910 | Msa1287190 | 0.815589 | 8.554187e-52 | -8.615850e-47 |
| Msa1174910 | Msa1287460 | 0.828835 | 7.207390e-55 | -8.615850e-47 |
| Msa1174910 | Msa1298510 | 0.800763 | 1.237209e-48 | -8.615850e-47 |
| Msa1174910 | Msa1313320 | 0.803554 | 3.298059e-49 | -8.615850e-47 |
| Msa1174910 | Msa1327980 | 0.810616 | 1.055129e-50 | -8.615850e-47 |
| Msa1174910 | Msa1328040 | 0.823978 | 1.035235e-53 | -8.615850e-47 |
| Msa1174910 | Msa1346370 | 0.805762 | 1.141169e-49 | -8.615850e-47 |
| Msa1174910 | Msa1348890 | 0.813225 | 2.850588e-51 | -8.615850e-47 |
| Msa1174910 | Msa1353470 | 0.812691 | 3.732635e-51 | -8.615850e-47 |
| Msa1174910 | Msa1366810 | 0.803074 | 4.147111e-49 | -8.615850e-47 |
| Msa1174910 | Msa1370070 | -0.803925 | 2.761955e-49 | -8.615850e-47 |
| Msa1174910 | Msa1375380 | 0.813433 | 2.565414e-51 | -8.615850e-47 |
| Msa1174910 | Msa1395900 | 0.833916 | 4.051075e-56 | -8.615850e-47 |
| Msa1174910 | Msa1395910 | 0.802748 | 4.842070e-49 | -8.615850e-47 |
| Msa1174910 | Msa1397860 | 0.801072 | 1.069744e-48 | -8.615850e-47 |
| Msa1174910 | Msa1402730 | 0.819576 | 1.079975e-52 | -8.615850e-47 |
| Msa1174910 | Msa1404020 | 0.840344 | 9.202952e-58 | -8.615850e-47 |
| Msa1174910 | Msa1412530 | 0.812852 | 3.440676e-51 | -8.615850e-47 |
| Msa1174910 | Msa1412640 | 0.818795 | 1.626384e-52 | -8.615850e-47 |
| Msa1174910 | Msa1458750 | 0.804661 | 1.940725e-49 | -8.615850e-47 |
| Msa1174910 | Msa1461300 | 0.803054 | 4.186993e-49 | -8.615850e-47 |
| Msa1174910 | Msa1466540 | 0.814002 | 1.923086e-51 | -8.615850e-47 |
| Msa0498650 | Msa1174910 | 0.808115 | 3.628524e-50 | -8.615850e-47 |
| Msa0509900 | Msa1174910 | 0.816845 | 4.482267e-52 | -8.615850e-47 |
| Msa0512750 | Msa1174910 | 0.821752 | 3.417042e-53 | -8.615850e-47 |
| Msa0523940 | Msa1174910 | 0.814009 | 1.916577e-51 | -8.615850e-47 |
| Msa0529040 | Msa1174910 | 0.823504 | 1.336733e-53 | -8.615850e-47 |
| Msa0545700 | Msa1174910 | 0.836889 | 7.180208e-57 | -8.615850e-47 |
| Msa0548920 | Msa1174910 | 0.803702 | 3.072416e-49 | -8.615850e-47 |
| Msa0562440 | Msa1174910 | 0.806915 | 6.523496e-50 | -8.615850e-47 |
| Msa0569220 | Msa1174910 | 0.809212 | 2.116003e-50 | -8.615850e-47 |
| Msa0585230 | Msa1174910 | 0.804874 | 1.752123e-49 | -8.615850e-47 |
| Msa0598780 | Msa1174910 | 0.810109 | 1.357505e-50 | -8.615850e-47 |
| Msa0602390 | Msa1174910 | 0.817634 | 2.978712e-52 | -8.615850e-47 |
| Msa0844490 | Msa1174910 | 0.844751 | 6.225335e-59 | -8.615850e-47 |
| Msa0844570 | Msa1174910 | 0.804954 | 1.685776e-49 | -8.615850e-47 |
| Msa0849030 | Msa1174910 | 0.819127 | 1.367276e-52 | -8.615850e-47 |
| Msa0861130 | Msa1174910 | 0.805349 | 1.393761e-49 | -8.615850e-47 |
| Msa0877250 | Msa1174910 | 0.841304 | 5.153387e-58 | -8.615850e-47 |
| Msa0897330 | Msa1174910 | 0.828558 | 8.408364e-55 | -8.615850e-47 |
| Msa0899430 | Msa1174910 | 0.818415 | 1.984089e-52 | -8.615850e-47 |
| Msa0899450 | Msa1174910 | 0.801762 | 7.725823e-49 | -8.615850e-47 |
| Msa0907260 | Msa1174910 | 0.832710 | 8.091671e-56 | -8.615850e-47 |
| Msa0907950 | Msa1174910 | 0.834516 | 2.864368e-56 | -8.615850e-47 |
| Msa0907960 | Msa1174910 | 0.801610 | 8.300296e-49 | -8.615850e-47 |
| Msa0927380 | Msa1174910 | 0.835707 | 1.434397e-56 | -8.615850e-47 |
| Msa0935910 | Msa1174910 | 0.802935 | 4.430371e-49 | -8.615850e-47 |
| Msa0936300 | Msa1174910 | 0.818665 | 1.741423e-52 | -8.615850e-47 |
| Msa0942200 | Msa1174910 | 0.816092 | 6.606759e-52 | -8.615850e-47 |
| Msa0947660 | Msa1174910 | 0.834352 | 3.149616e-56 | -8.615850e-47 |
| Msa0953120 | Msa1174910 | 0.827518 | 1.496419e-54 | -8.615850e-47 |
| Msa0956270 | Msa1174910 | 0.816645 | 4.969659e-52 | -8.615850e-47 |
| Msa0958550 | Msa1174910 | 0.816415 | 5.595975e-52 | -8.615850e-47 |
| Msa0964900 | Msa1174910 | 0.821363 | 4.201409e-53 | -8.615850e-47 |
| Msa0969520 | Msa1174910 | 0.811477 | 6.864994e-51 | -8.615850e-47 |
| Msa0969810 | Msa1174910 | 0.811752 | 5.981556e-51 | -8.615850e-47 |
| Msa0973100 | Msa1174910 | 0.818587 | 1.813039e-52 | -8.615850e-47 |
| Msa0974080 | Msa1174910 | 0.825346 | 4.927407e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174910 | MtrunA17_Chr8g0344851 | 82.967 | 182 | 27 | 1 | 137 | 314 | 5 | 186 | 3.60e-103 | 300 |
| Msa1174910 | MtrunA17_Chr4g0061881 | 66.471 | 170 | 48 | 4 | 137 | 297 | 423 | 592 | 1.39e-55 | 191 |
| Msa1174910 | MtrunA17_Chr8g0344821 | 73.913 | 115 | 26 | 1 | 193 | 303 | 2 | 116 | 1.27e-52 | 168 |
| Msa1174910 | MtrunA17_Chr2g0307851 | 62.353 | 170 | 55 | 4 | 137 | 297 | 435 | 604 | 8.38e-51 | 178 |
| Msa1174910 | MtrunA17_Chr4g0064001 | 66.434 | 143 | 41 | 3 | 156 | 297 | 2 | 138 | 8.56e-49 | 162 |
| Msa1174910 | MtrunA17_Chr4g0061831 | 79.710 | 69 | 14 | 0 | 225 | 293 | 48 | 116 | 7.72e-32 | 115 |
| Msa1174910 | MtrunA17_Chr4g0073621 | 79.661 | 59 | 10 | 1 | 238 | 294 | 1 | 59 | 1.33e-25 | 97.4 |
| Msa1174910 | MtrunA17_Chr3g0143931 | 44.516 | 155 | 36 | 6 | 2 | 113 | 342 | 489 | 8.22e-25 | 105 |
| Msa1174910 | MtrunA17_Chr5g0437451 | 70.312 | 64 | 16 | 1 | 230 | 290 | 85 | 148 | 1.04e-22 | 92.4 |
| Msa1174910 | MtrunA17_Chr5g0408341 | 72.222 | 54 | 15 | 0 | 243 | 296 | 1 | 54 | 1.09e-19 | 83.6 |
| Msa1174910 | MtrunA17_Chr5g0437391 | 45.865 | 133 | 45 | 5 | 136 | 265 | 192 | 300 | 2.44e-19 | 87.0 |
| Msa1174910 | MtrunA17_Chr4g0069081 | 54.286 | 70 | 32 | 0 | 225 | 294 | 8 | 77 | 9.42e-19 | 80.1 |
| Msa1174910 | MtrunA17_Chr4g0076561 | 40.000 | 115 | 52 | 2 | 137 | 251 | 89 | 186 | 2.14e-16 | 75.9 |
| Msa1174910 | MtrunA17_Chr5g0448641 | 63.043 | 46 | 17 | 0 | 42 | 87 | 431 | 476 | 4.28e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174910 | AT1G73990.1 | 57.647 | 170 | 63 | 4 | 137 | 297 | 441 | 610 | 4.63e-45 | 162 |
| Msa1174910 | AT1G73990.2 | 47.788 | 113 | 50 | 4 | 137 | 240 | 441 | 553 | 1.06e-14 | 75.1 |
Find 71 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAAACAACAGGGTTCTTC+TGG | 0.189314 | 8_1:-6148394 | Msa1174910:CDS |
| AGGAATATTGGCCTTCAATT+TGG | 0.198279 | 8_1:+6148195 | None:intergenic |
| GCAGAAAACCTTACCTTAAC+TGG | 0.249629 | 8_1:-6148514 | Msa1174910:CDS |
| TTGAGTGGTGTATAATATTA+AGG | 0.252125 | 8_1:+6148648 | None:intergenic |
| AGGTTGCACAAGGGAGGATT+TGG | 0.320673 | 8_1:-6148288 | Msa1174910:CDS |
| GATGCACATCCAATATTTAC+AGG | 0.344035 | 8_1:-6150573 | Msa1174910:intron |
| CTTACCTTAACTGGTTCAAT+TGG | 0.346263 | 8_1:-6148505 | Msa1174910:CDS |
| ATTAGATACTGCATCTTTAC+CGG | 0.371656 | 8_1:+6148264 | None:intergenic |
| TATAAGCTCTGGGTGGGACT+TGG | 0.382520 | 8_1:-6150189 | Msa1174910:CDS |
| GGGCAGTCACCTGTAAATAT+TGG | 0.383979 | 8_1:+6150564 | None:intergenic |
| ACATGATCTGGAACTGTTGC+TGG | 0.385137 | 8_1:+6149380 | None:intergenic |
| TTGAAGATGCTTCACAAAAC+AGG | 0.397394 | 8_1:-6150635 | Msa1174910:CDS |
| GCTCCGTGCTGCTAAACAAC+AGG | 0.399282 | 8_1:-6148404 | Msa1174910:CDS |
| CACTCCAATTGAACCAGTTA+AGG | 0.399513 | 8_1:+6148501 | None:intergenic |
| AGCAGGTGGTATTTCTAATC+TGG | 0.402766 | 8_1:-6148623 | Msa1174910:CDS |
| TGGTTCAATTGGAGTGGACT+TGG | 0.406136 | 8_1:-6148494 | Msa1174910:CDS |
| CCAGCTACACTTATAAGCTC+TGG | 0.431707 | 8_1:-6150200 | Msa1174910:CDS |
| CTAAACAACAGGGTTCTTCT+GGG | 0.433656 | 8_1:-6148393 | Msa1174910:CDS |
| TACATACGACTCTTGGCAAA+TGG | 0.438498 | 8_1:+6148370 | None:intergenic |
| TATTGCTTCGATGTCTGATC+TGG | 0.439624 | 8_1:-6148584 | Msa1174910:CDS |
| TCGATGTCTGATCTGGCAAC+AGG | 0.445511 | 8_1:-6148577 | Msa1174910:CDS |
| GCAGGATACTACGTGGCAAC+AGG | 0.447978 | 8_1:-6148553 | Msa1174910:CDS |
| ATGTCAGTATTACTGCTAGA+TGG | 0.451288 | 8_1:+6149312 | None:intergenic |
| ACCTGTTCAATTCTGTAAAA+CGG | 0.459984 | 8_1:+6150120 | None:intergenic |
| GGTATTTCTAATCTGGCAAC+AGG | 0.465104 | 8_1:-6148616 | Msa1174910:CDS |
| TTGTTTATACATACGACTCT+TGG | 0.466487 | 8_1:+6148363 | None:intergenic |
| TTGTGATATCCACCATCATC+TGG | 0.467543 | 8_1:+6148427 | None:intergenic |
| AGATGCAGTATCTAATGGTT+TGG | 0.468066 | 8_1:-6148257 | Msa1174910:CDS |
| AAACTGAAGCCATTGCAATC+AGG | 0.468127 | 8_1:-6149272 | Msa1174910:intron |
| GGTAAAGATGCAGTATCTAA+TGG | 0.470828 | 8_1:-6148262 | Msa1174910:CDS |
| CTTGTCTACAGTCATTGATC+TGG | 0.472479 | 8_1:+6148318 | None:intergenic |
| GATGTACTATTTACATGATC+TGG | 0.474263 | 8_1:+6149368 | None:intergenic |
| ATAAGCTCTGGGTGGGACTT+GGG | 0.489703 | 8_1:-6150188 | Msa1174910:CDS |
| CCAGAGCTTATAAGTGTAGC+TGG | 0.500367 | 8_1:+6150200 | None:intergenic |
| TCTAATCTGGCAACAGGCGC+AGG | 0.506218 | 8_1:-6148610 | Msa1174910:CDS |
| ATCAATGACTGTAGACAAGT+TGG | 0.507353 | 8_1:-6148314 | Msa1174910:CDS |
| TATTGCTATAGCCAAATTGA+AGG | 0.515312 | 8_1:-6148206 | Msa1174910:CDS |
| CAATTGAACCAGTTAAGGTA+AGG | 0.517196 | 8_1:+6148506 | None:intergenic |
| TCTGATCTGGCAACAGGCGC+AGG | 0.521213 | 8_1:-6148571 | Msa1174910:CDS |
| CTTAACTGGTTCAATTGGAG+TGG | 0.529399 | 8_1:-6148500 | Msa1174910:CDS |
| TACAATAACCCTTAAAACCA+CGG | 0.534470 | 8_1:+6148131 | None:intergenic |
| TACTACGTGGCAACAGGCGC+AGG | 0.540589 | 8_1:-6148547 | Msa1174910:CDS |
| GGTTCAATTGGAGTGGACTT+GGG | 0.542242 | 8_1:-6148493 | Msa1174910:CDS |
| CAGCTACACTTATAAGCTCT+GGG | 0.549173 | 8_1:-6150199 | Msa1174910:CDS |
| GACTGTAGACAAGTTGGAAG+AGG | 0.555043 | 8_1:-6148308 | Msa1174910:CDS |
| AACCCTGTTGTTTAGCAGCA+CGG | 0.568819 | 8_1:+6148401 | None:intergenic |
| AATGGTTTGGTTGATGCTAT+CGG | 0.570525 | 8_1:-6148244 | Msa1174910:CDS |
| TTGAAAGAAAATCCAGATGA+TGG | 0.570725 | 8_1:-6148439 | Msa1174910:CDS |
| AAACAGACAGGTTACTATTG+TGG | 0.574519 | 8_1:-6148170 | Msa1174910:CDS |
| CAATATTCCTCAAAACAGAC+AGG | 0.577643 | 8_1:-6148182 | Msa1174910:CDS |
| CTTAAAACCACGGGAAGAGT+AGG | 0.580092 | 8_1:+6148141 | None:intergenic |
| ACAATAACCCTTAAAACCAC+GGG | 0.587325 | 8_1:+6148132 | None:intergenic |
| TACACTTATAAGCTCTGGGT+GGG | 0.595495 | 8_1:-6150195 | Msa1174910:CDS |
| TGGAAGAGGTTGCACAAGGG+AGG | 0.596294 | 8_1:-6148294 | Msa1174910:CDS |
| AAGTTGGAAGAGGTTGCACA+AGG | 0.604460 | 8_1:-6148298 | Msa1174910:CDS |
| TAAACAATTTCGAGATGATG+CGG | 0.607766 | 8_1:-6148347 | Msa1174910:CDS |
| GAGCTCTCCTACTCTTCCCG+TGG | 0.608108 | 8_1:-6148148 | Msa1174910:CDS |
| TTATACACCACTCAACAAGC+AGG | 0.627229 | 8_1:-6148640 | Msa1174910:CDS |
| CTCCGTGCTGCTAAACAACA+GGG | 0.630059 | 8_1:-6148403 | Msa1174910:CDS |
| TTGCATCAACCTGATTGCAA+TGG | 0.630090 | 8_1:+6149263 | None:intergenic |
| AAAGAAAATCCAGATGATGG+TGG | 0.630987 | 8_1:-6148436 | Msa1174910:CDS |
| GCACAAGGGAGGATTTGGAC+CGG | 0.632737 | 8_1:-6148283 | Msa1174910:CDS |
| GGTTTGGTTGATGCTATCGG+TGG | 0.655797 | 8_1:-6148241 | Msa1174910:CDS |
| ATACAACTATCAGTTGTGCA+AGG | 0.660458 | 8_1:-6150606 | Msa1174910:CDS |
| AATACCACCTGCTTGTTGAG+TGG | 0.671018 | 8_1:+6148633 | None:intergenic |
| TCGTTGAATATAATAACTAG+AGG | 0.680638 | 8_1:-6148096 | None:intergenic |
| TACACCACTCAACAAGCAGG+TGG | 0.691418 | 8_1:-6148637 | Msa1174910:CDS |
| CTACACTTATAAGCTCTGGG+TGG | 0.694587 | 8_1:-6150196 | Msa1174910:CDS |
| AGTTGGAAGAGGTTGCACAA+GGG | 0.695276 | 8_1:-6148297 | Msa1174910:CDS |
| AGTTGTGCAAGGATACACAT+CGG | 0.736237 | 8_1:-6150595 | Msa1174910:CDS |
| AACAGGCGCAGGATACTACG+TGG | 0.781709 | 8_1:-6148560 | Msa1174910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTTTATGGATTTAATA+AGG | - | chr8_1:6148347-6148366 | Msa1174910:CDS | 15.0% |
| !! | AATAAAATGAGAAATTCATA+AGG | + | chr8_1:6148726-6148745 | None:intergenic | 15.0% |
| !!! | TAATTTAATGATTTTCCTTA+AGG | - | chr8_1:6148879-6148898 | Msa1174910:intron | 15.0% |
| !!! | AATTTAATGATTTTCCTTAA+GGG | - | chr8_1:6148880-6148899 | Msa1174910:intron | 15.0% |
| !! | GGTAAATCATTAAATTAAAA+GGG | + | chr8_1:6149082-6149101 | None:intergenic | 15.0% |
| !! | AGGTAAATCATTAAATTAAA+AGG | + | chr8_1:6149083-6149102 | None:intergenic | 15.0% |
| !!! | CTTTTTTTAATTTCAATTCT+TGG | + | chr8_1:6149400-6149419 | None:intergenic | 15.0% |
| !! | CAAGAATTGAAATTAAAAAA+AGG | - | chr8_1:6149398-6149417 | Msa1174910:intron | 15.0% |
| !!! | CTTTTGTACTTATCATTTTA+TGG | - | chr8_1:6148336-6148355 | Msa1174910:CDS | 20.0% |
| !!! | ATTTTATGGATTTAATAAGG+TGG | - | chr8_1:6148350-6148369 | Msa1174910:CDS | 20.0% |
| !!! | GTATTTGAGTTTAAGATTTA+TGG | + | chr8_1:6148389-6148408 | None:intergenic | 20.0% |
| !! | AAATACACTACAAAAATTCA+TGG | - | chr8_1:6148403-6148422 | Msa1174910:CDS | 20.0% |
| !!! | TATTTCTATGCATAATTACA+TGG | - | chr8_1:6148793-6148812 | Msa1174910:intron | 20.0% |
| !!! | ATTTAATGATTTTCCTTAAG+GGG | - | chr8_1:6148881-6148900 | Msa1174910:intron | 20.0% |
| !! | AATAAGCAAATATAACAATC+GGG | + | chr8_1:6149922-6149941 | None:intergenic | 20.0% |
| !! | GAATAAGCAAATATAACAAT+CGG | + | chr8_1:6149923-6149942 | None:intergenic | 20.0% |
| !! | ATTGTTATATTTGCTTATTC+AGG | - | chr8_1:6149923-6149942 | Msa1174910:intron | 20.0% |
| !! | TATTGTATTTCGGTTATATT+AGG | - | chr8_1:6150044-6150063 | Msa1174910:intron | 20.0% |
| !! | AGTTTAAGATTTATGGTTCA+TGG | + | chr8_1:6148382-6148401 | None:intergenic | 25.0% |
| ! | CTATAGTCAAATATAGAACA+AGG | + | chr8_1:6148503-6148522 | None:intergenic | 25.0% |
| !! | TTTATCTTTTACGAAGATTG+GGG | + | chr8_1:6148675-6148694 | None:intergenic | 25.0% |
| !! | GTTTATCTTTTACGAAGATT+GGG | + | chr8_1:6148676-6148695 | None:intergenic | 25.0% |
| !! | AGTTTATCTTTTACGAAGAT+TGG | + | chr8_1:6148677-6148696 | None:intergenic | 25.0% |
| !!! | ATAATTACATGGTTTTTCAG+AGG | - | chr8_1:6148804-6148823 | Msa1174910:intron | 25.0% |
| !! | TTTAATGATTTTCCTTAAGG+GGG | - | chr8_1:6148882-6148901 | Msa1174910:intron | 25.0% |
| ! | ATTTATCTTGTTAATTGACG+CGG | - | chr8_1:6149317-6149336 | Msa1174910:CDS | 25.0% |
| ! | AAAAAATAACTATACCTGCA+GGG | + | chr8_1:6149588-6149607 | None:intergenic | 25.0% |
| !! | ATGTAGGGAAAATGAATTTT+CGG | + | chr8_1:6149723-6149742 | None:intergenic | 25.0% |
| ! | TTACGGTGACTTAAAAAAAA+AGG | - | chr8_1:6149977-6149996 | Msa1174910:intron | 25.0% |
| ! | TACGGTGACTTAAAAAAAAA+GGG | - | chr8_1:6149978-6149997 | Msa1174910:intron | 25.0% |
| ! | TTGAGTGGTGTATAATATTA+AGG | + | chr8_1:6150096-6150115 | None:intergenic | 25.0% |
| !! | AAATCAATCTTTTCATTCTC+AGG | + | chr8_1:6150284-6150303 | None:intergenic | 25.0% |
| CAAAAATTCATGGACAAAGA+AGG | - | chr8_1:6148413-6148432 | Msa1174910:CDS | 30.0% | |
| CTGTTATTGTTATGCTTTAG+TGG | - | chr8_1:6148448-6148467 | Msa1174910:CDS | 30.0% | |
| ACCTGTTCAATTCTGTAAAA+CGG | + | chr8_1:6148624-6148643 | None:intergenic | 30.0% | |
| AATGAGAAATTCATAAGGCA+AGG | + | chr8_1:6148721-6148740 | None:intergenic | 30.0% | |
| TTCCTTGTCTAGTGTAAAAA+AGG | - | chr8_1:6148757-6148776 | Msa1174910:intron | 30.0% | |
| TCCTTGTCTAGTGTAAAAAA+GGG | - | chr8_1:6148758-6148777 | Msa1174910:intron | 30.0% | |
| CTACAAACAAGTTTGTCAAT+AGG | + | chr8_1:6148840-6148859 | None:intergenic | 30.0% | |
| ! | TTTTGGCAAAGAATGCATTA+AGG | + | chr8_1:6149103-6149122 | None:intergenic | 30.0% |
| TTGACTCATGTTGCATAATA+CGG | + | chr8_1:6149260-6149279 | None:intergenic | 30.0% | |
| GATGTACTATTTACATGATC+TGG | + | chr8_1:6149376-6149395 | None:intergenic | 30.0% | |
| GTGGTTTAATATAGATGTCT+TGG | + | chr8_1:6149538-6149557 | None:intergenic | 30.0% | |
| CAAAAAATAACTATACCTGC+AGG | + | chr8_1:6149589-6149608 | None:intergenic | 30.0% | |
| !!! | CTGCAGGTATAGTTATTTTT+TGG | - | chr8_1:6149587-6149606 | Msa1174910:intron | 30.0% |
| GAGAACTTGAATTCATTTCA+TGG | - | chr8_1:6149612-6149631 | Msa1174910:intron | 30.0% | |
| AATTGTGTCTTCCTAATTGA+CGG | - | chr8_1:6149681-6149700 | Msa1174910:intron | 30.0% | |
| ! | TGTAGGGAAAATGAATTTTC+GGG | + | chr8_1:6149722-6149741 | None:intergenic | 30.0% |
| AACATCATCAGAGATATGTA+GGG | + | chr8_1:6149738-6149757 | None:intergenic | 30.0% | |
| !! | GCTTATTCAGGTTTTATGTT+AGG | - | chr8_1:6149935-6149954 | Msa1174910:intron | 30.0% |
| !! | TCAGGTTTTATGTTAGGAAT+CGG | - | chr8_1:6149941-6149960 | Msa1174910:intron | 30.0% |
| CTGACTTTGGTATTGTATTT+CGG | - | chr8_1:6150034-6150053 | Msa1174910:intron | 30.0% | |
| TTGAAAGAAAATCCAGATGA+TGG | - | chr8_1:6150302-6150321 | Msa1174910:intron | 30.0% | |
| TTGTTTATACATACGACTCT+TGG | + | chr8_1:6150381-6150400 | None:intergenic | 30.0% | |
| TAAACAATTTCGAGATGATG+CGG | - | chr8_1:6150394-6150413 | Msa1174910:intron | 30.0% | |
| ATTAGATACTGCATCTTTAC+CGG | + | chr8_1:6150480-6150499 | None:intergenic | 30.0% | |
| TATTGCTATAGCCAAATTGA+AGG | - | chr8_1:6150535-6150554 | Msa1174910:intron | 30.0% | |
| TACAATAACCCTTAAAACCA+CGG | + | chr8_1:6150613-6150632 | None:intergenic | 30.0% | |
| TTGAAGATGCTTCACAAAAC+AGG | - | chr8_1:6148106-6148125 | Msa1174910:CDS | 35.0% | |
| ATACAACTATCAGTTGTGCA+AGG | - | chr8_1:6148135-6148154 | Msa1174910:CDS | 35.0% | |
| GATGCACATCCAATATTTAC+AGG | - | chr8_1:6148168-6148187 | Msa1174910:CDS | 35.0% | |
| ATAGCTATTCTACTTTGTCC+AGG | - | chr8_1:6148233-6148252 | Msa1174910:CDS | 35.0% | |
| TCCAGGTCTAATCAGAATAA+AGG | - | chr8_1:6148250-6148269 | Msa1174910:CDS | 35.0% | |
| ACCTTTATTCTGATTAGACC+TGG | + | chr8_1:6148254-6148273 | None:intergenic | 35.0% | |
| TCAGAATAAAGGTTGAGACT+CGG | - | chr8_1:6148261-6148280 | Msa1174910:CDS | 35.0% | |
| ! | AAGCTATGTGATACCTTTTC+AGG | + | chr8_1:6148287-6148306 | None:intergenic | 35.0% |
| GTTATGCTTTAGTGGTTACA+CGG | - | chr8_1:6148456-6148475 | Msa1174910:CDS | 35.0% | |
| ! | TCCGTTTTACAGAATTGAAC+AGG | - | chr8_1:6148620-6148639 | Msa1174910:CDS | 35.0% |
| !!! | TCCCTTTTTTACACTAGACA+AGG | + | chr8_1:6148762-6148781 | None:intergenic | 35.0% |
| !!! | CATACCCTGTTTTTTTACAC+AGG | + | chr8_1:6148979-6148998 | None:intergenic | 35.0% |
| CTGTGTAAAAAAACAGGGTA+TGG | - | chr8_1:6148977-6148996 | Msa1174910:intron | 35.0% | |
| GGAGCTTAATTATAATGCAC+CGG | - | chr8_1:6149052-6149071 | Msa1174910:intron | 35.0% | |
| GAGCTTAATTATAATGCACC+GGG | - | chr8_1:6149053-6149072 | Msa1174910:intron | 35.0% | |
| ATTAAATTAAAAGGGCAGCC+CGG | + | chr8_1:6149074-6149093 | None:intergenic | 35.0% | |
| ACAAGACTCAAGACTGTTTA+GGG | + | chr8_1:6149176-6149195 | None:intergenic | 35.0% | |
| ATGTCAGTATTACTGCTAGA+TGG | + | chr8_1:6149432-6149451 | None:intergenic | 35.0% | |
| CAAGCCAGAATAATTAGCAT+GGG | + | chr8_1:6149504-6149523 | None:intergenic | 35.0% | |
| TCAAGCCAGAATAATTAGCA+TGG | + | chr8_1:6149505-6149524 | None:intergenic | 35.0% | |
| !! | TGCTAATTATTCTGGCTTGA+TGG | - | chr8_1:6149505-6149524 | Msa1174910:intron | 35.0% |
| !! | ACTTTGAAGTACCGTCAATT+AGG | + | chr8_1:6149695-6149714 | None:intergenic | 35.0% |
| TAATTGACGGTACTTCAAAG+TGG | - | chr8_1:6149694-6149713 | Msa1174910:intron | 35.0% | |
| CAACATCATCAGAGATATGT+AGG | + | chr8_1:6149739-6149758 | None:intergenic | 35.0% | |
| ! | GCTCAACAATTTTCTTGTGT+GGG | - | chr8_1:6149820-6149839 | Msa1174910:intron | 35.0% |
| ! | CTCAACAATTTTCTTGTGTG+GGG | - | chr8_1:6149821-6149840 | Msa1174910:intron | 35.0% |
| CTTAAAAAAAAAGGGCAGTC+CGG | - | chr8_1:6149986-6150005 | Msa1174910:intron | 35.0% | |
| AAGTCAGATATTACACACTC+TGG | + | chr8_1:6150021-6150040 | None:intergenic | 35.0% | |
| GAGTGTGTAATATCTGACTT+TGG | - | chr8_1:6150021-6150040 | Msa1174910:intron | 35.0% | |
| CAATTGAACCAGTTAAGGTA+AGG | + | chr8_1:6150238-6150257 | None:intergenic | 35.0% | |
| ! | CTTACCTTAACTGGTTCAAT+TGG | - | chr8_1:6150236-6150255 | Msa1174910:intron | 35.0% |
| ! | AAAGAAAATCCAGATGATGG+TGG | - | chr8_1:6150305-6150324 | Msa1174910:intron | 35.0% |
| ATCAATGACTGTAGACAAGT+TGG | - | chr8_1:6150427-6150446 | Msa1174910:intron | 35.0% | |
| GGTAAAGATGCAGTATCTAA+TGG | - | chr8_1:6150479-6150498 | Msa1174910:intron | 35.0% | |
| AGATGCAGTATCTAATGGTT+TGG | - | chr8_1:6150484-6150503 | Msa1174910:intron | 35.0% | |
| !! | AATGGTTTGGTTGATGCTAT+CGG | - | chr8_1:6150497-6150516 | Msa1174910:intron | 35.0% |
| !! | AGGAATATTGGCCTTCAATT+TGG | + | chr8_1:6150549-6150568 | None:intergenic | 35.0% |
| !!! | CTGTCTGTTTTGAGGAATAT+TGG | + | chr8_1:6150561-6150580 | None:intergenic | 35.0% |
| CAATATTCCTCAAAACAGAC+AGG | - | chr8_1:6150559-6150578 | Msa1174910:intron | 35.0% | |
| ! | ATAGTAACCTGTCTGTTTTG+AGG | + | chr8_1:6150569-6150588 | None:intergenic | 35.0% |
| AAACAGACAGGTTACTATTG+TGG | - | chr8_1:6150571-6150590 | Msa1174910:intron | 35.0% | |
| ACAATAACCCTTAAAACCAC+GGG | + | chr8_1:6150612-6150631 | None:intergenic | 35.0% | |
| AGTTGTGCAAGGATACACAT+CGG | - | chr8_1:6148146-6148165 | Msa1174910:CDS | 40.0% | |
| AATATTTACAGGTGACTGCC+CGG | - | chr8_1:6148179-6148198 | Msa1174910:CDS | 40.0% | |
| ! | TATGGTCTTGGCTTCATCTT+TGG | - | chr8_1:6148208-6148227 | Msa1174910:CDS | 40.0% |
| CAGCTACACTTATAAGCTCT+GGG | - | chr8_1:6148542-6148561 | Msa1174910:CDS | 40.0% | |
| !! | TACACTTATAAGCTCTGGGT+GGG | - | chr8_1:6148546-6148565 | Msa1174910:CDS | 40.0% |
| ! | AATGATTTTCCTTAAGGGGG+AGG | - | chr8_1:6148885-6148904 | Msa1174910:intron | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr8_1:6148925-6148944 | Msa1174910:intron | 40.0% | |
| AGCCTCCTGTGTAAAAAAAC+AGG | - | chr8_1:6148971-6148990 | Msa1174910:intron | 40.0% | |
| GCCTCCTGTGTAAAAAAACA+GGG | - | chr8_1:6148972-6148991 | Msa1174910:intron | 40.0% | |
| !!! | ACCCTGTTTTTTTACACAGG+AGG | + | chr8_1:6148976-6148995 | None:intergenic | 40.0% |
| ! | TTCGTCGCTTCATGTCTTTT+TGG | + | chr8_1:6149120-6149139 | None:intergenic | 40.0% |
| GACAAGACTCAAGACTGTTT+AGG | + | chr8_1:6149177-6149196 | None:intergenic | 40.0% | |
| !! | CGGAATAGTGTTGACTTGTT+GGG | + | chr8_1:6149240-6149259 | None:intergenic | 40.0% |
| !! | ACGGAATAGTGTTGACTTGT+TGG | + | chr8_1:6149241-6149260 | None:intergenic | 40.0% |
| AAACTGAAGCCATTGCAATC+AGG | - | chr8_1:6149469-6149488 | Msa1174910:intron | 40.0% | |
| TTGCATCAACCTGATTGCAA+TGG | + | chr8_1:6149481-6149500 | None:intergenic | 40.0% | |
| GCAACCCATGCTAATTATTC+TGG | - | chr8_1:6149497-6149516 | Msa1174910:intron | 40.0% | |
| GCAGCACAATATTTGTCTAG+TGG | + | chr8_1:6149557-6149576 | None:intergenic | 40.0% | |
| ! | GGCTCAACAATTTTCTTGTG+TGG | - | chr8_1:6149819-6149838 | Msa1174910:intron | 40.0% |
| !! | GGGTATATCCAGAAGCATTT+GGG | - | chr8_1:6149841-6149860 | Msa1174910:intron | 40.0% |
| TCGGACATCGTATCTGTTTA+CGG | - | chr8_1:6149960-6149979 | Msa1174910:intron | 40.0% | |
| !! | CACACTCTGGAACTTAAAAC+CGG | + | chr8_1:6150008-6150027 | None:intergenic | 40.0% |
| TTATACACCACTCAACAAGC+AGG | - | chr8_1:6150101-6150120 | Msa1174910:intron | 40.0% | |
| ! | AGCAGGTGGTATTTCTAATC+TGG | - | chr8_1:6150118-6150137 | Msa1174910:intron | 40.0% |
| ! | GGTATTTCTAATCTGGCAAC+AGG | - | chr8_1:6150125-6150144 | Msa1174910:CDS | 40.0% |
| TATTGCTTCGATGTCTGATC+TGG | - | chr8_1:6150157-6150176 | Msa1174910:CDS | 40.0% | |
| GCAGAAAACCTTACCTTAAC+TGG | - | chr8_1:6150227-6150246 | Msa1174910:intron | 40.0% | |
| CACTCCAATTGAACCAGTTA+AGG | + | chr8_1:6150243-6150262 | None:intergenic | 40.0% | |
| ! | CTTAACTGGTTCAATTGGAG+TGG | - | chr8_1:6150241-6150260 | Msa1174910:intron | 40.0% |
| TTGTGATATCCACCATCATC+TGG | + | chr8_1:6150317-6150336 | None:intergenic | 40.0% | |
| CTAAACAACAGGGTTCTTCT+GGG | - | chr8_1:6150348-6150367 | Msa1174910:intron | 40.0% | |
| TACATACGACTCTTGGCAAA+TGG | + | chr8_1:6150374-6150393 | None:intergenic | 40.0% | |
| CTTGTCTACAGTCATTGATC+TGG | + | chr8_1:6150426-6150445 | None:intergenic | 40.0% | |
| !!! | TACTCTTCCCGTGGTTTTAA+GGG | - | chr8_1:6150602-6150621 | Msa1174910:CDS | 40.0% |
| GGGCAGTCACCTGTAAATAT+TGG | + | chr8_1:6148180-6148199 | None:intergenic | 45.0% | |
| ATATTTACAGGTGACTGCCC+GGG | - | chr8_1:6148180-6148199 | Msa1174910:CDS | 45.0% | |
| AGCCAAGACCATAATTGACC+CGG | + | chr8_1:6148201-6148220 | None:intergenic | 45.0% | |
| ACATAGCTTCGATGCTGAGA+AGG | - | chr8_1:6148298-6148317 | Msa1174910:CDS | 45.0% | |
| CCAGAGCTTATAAGTGTAGC+TGG | + | chr8_1:6148544-6148563 | None:intergenic | 45.0% | |
| CCAGCTACACTTATAAGCTC+TGG | - | chr8_1:6148541-6148560 | Msa1174910:CDS | 45.0% | |
| !! | CTACACTTATAAGCTCTGGG+TGG | - | chr8_1:6148545-6148564 | Msa1174910:CDS | 45.0% |
| ! | TTTTCCTTAAGGGGGAGGAT+TGG | - | chr8_1:6148890-6148909 | Msa1174910:intron | 45.0% |
| CGTACGATACACCAAATGGT+GGG | - | chr8_1:6149003-6149022 | Msa1174910:intron | 45.0% | |
| ! | AGACTGTTTAGGGTGGATAC+TGG | + | chr8_1:6149166-6149185 | None:intergenic | 45.0% |
| AGACTCAAGACTGTTTAGGG+TGG | + | chr8_1:6149173-6149192 | None:intergenic | 45.0% | |
| ! | ACATGATCTGGAACTGTTGC+TGG | + | chr8_1:6149364-6149383 | None:intergenic | 45.0% |
| GTCTGCTTTAACGATGTGCA+AGG | + | chr8_1:6149770-6149789 | None:intergenic | 45.0% | |
| !! | GGGGTATATCCAGAAGCATT+TGG | - | chr8_1:6149840-6149859 | Msa1174910:intron | 45.0% |
| ! | AATACCACCTGCTTGTTGAG+TGG | + | chr8_1:6150111-6150130 | None:intergenic | 45.0% |
| ! | TGGTTCAATTGGAGTGGACT+TGG | - | chr8_1:6150247-6150266 | Msa1174910:intron | 45.0% |
| ! | GGTTCAATTGGAGTGGACTT+GGG | - | chr8_1:6150248-6150267 | Msa1174910:intron | 45.0% |
| ! | AACCCTGTTGTTTAGCAGCA+CGG | + | chr8_1:6150343-6150362 | None:intergenic | 45.0% |
| GCTAAACAACAGGGTTCTTC+TGG | - | chr8_1:6150347-6150366 | Msa1174910:intron | 45.0% | |
| ! | GACTGTAGACAAGTTGGAAG+AGG | - | chr8_1:6150433-6150452 | Msa1174910:intron | 45.0% |
| AAGTTGGAAGAGGTTGCACA+AGG | - | chr8_1:6150443-6150462 | Msa1174910:intron | 45.0% | |
| AGTTGGAAGAGGTTGCACAA+GGG | - | chr8_1:6150444-6150463 | Msa1174910:intron | 45.0% | |
| CTTAAAACCACGGGAAGAGT+AGG | + | chr8_1:6150603-6150622 | None:intergenic | 45.0% | |
| !! | CTACTCTTCCCGTGGTTTTA+AGG | - | chr8_1:6150601-6150620 | Msa1174910:CDS | 45.0% |
| GCCAAGACCATAATTGACCC+GGG | + | chr8_1:6148200-6148219 | None:intergenic | 50.0% | |
| !! | TATAAGCTCTGGGTGGGACT+TGG | - | chr8_1:6148552-6148571 | Msa1174910:CDS | 50.0% |
| !! | ATAAGCTCTGGGTGGGACTT+GGG | - | chr8_1:6148553-6148572 | Msa1174910:CDS | 50.0% |
| AAGGTCACGTGTTCAAGTCC+TGG | - | chr8_1:6148944-6148963 | Msa1174910:intron | 50.0% | |
| ! | TTACACAGGAGGCTGTTTCC+AGG | + | chr8_1:6148965-6148984 | None:intergenic | 50.0% |
| GCTGCGTACGATACACCAAA+TGG | - | chr8_1:6148999-6149018 | Msa1174910:intron | 50.0% | |
| GCGTACGATACACCAAATGG+TGG | - | chr8_1:6149002-6149021 | Msa1174910:intron | 50.0% | |
| TTGCCAAACCAGCTGCTTCT+TGG | - | chr8_1:6149798-6149817 | Msa1174910:intron | 50.0% | |
| TTGTTGAGCCAAGAAGCAGC+TGG | + | chr8_1:6149809-6149828 | None:intergenic | 50.0% | |
| !! | ATCCAGAAGCATTTGGGTGC+TGG | - | chr8_1:6149847-6149866 | Msa1174910:intron | 50.0% |
| TACACCACTCAACAAGCAGG+TGG | - | chr8_1:6150104-6150123 | Msa1174910:intron | 50.0% | |
| TCGATGTCTGATCTGGCAAC+AGG | - | chr8_1:6150164-6150183 | Msa1174910:CDS | 50.0% | |
| ! | CTCCGTGCTGCTAAACAACA+GGG | - | chr8_1:6150338-6150357 | Msa1174910:intron | 50.0% |
| AGGTTGCACAAGGGAGGATT+TGG | - | chr8_1:6150453-6150472 | Msa1174910:intron | 50.0% | |
| ! | GGTTTGGTTGATGCTATCGG+TGG | - | chr8_1:6150500-6150519 | Msa1174910:intron | 50.0% |
| GTGACTGCCCGGGTCAATTA+TGG | - | chr8_1:6148190-6148209 | Msa1174910:CDS | 55.0% | |
| GCCCGGGTCAATTATGGTCT+TGG | - | chr8_1:6148196-6148215 | Msa1174910:CDS | 55.0% | |
| GGTTGAGACTCGGCCTGAAA+AGG | - | chr8_1:6148271-6148290 | Msa1174910:CDS | 55.0% | |
| CATATGCAGAGTCCGGGAAG+GGG | + | chr8_1:6149030-6149049 | None:intergenic | 55.0% | |
| GCATATGCAGAGTCCGGGAA+GGG | + | chr8_1:6149031-6149050 | None:intergenic | 55.0% | |
| CTTCCCGGACTCTGCATATG+CGG | - | chr8_1:6149030-6149049 | Msa1174910:intron | 55.0% | |
| TTCCCGGACTCTGCATATGC+GGG | - | chr8_1:6149031-6149050 | Msa1174910:intron | 55.0% | |
| GAGCCAAGAAGCAGCTGGTT+TGG | + | chr8_1:6149804-6149823 | None:intergenic | 55.0% | |
| CACCAGCACCCAAATGCTTC+TGG | + | chr8_1:6149852-6149871 | None:intergenic | 55.0% | |
| !! | CAGAAGCATTTGGGTGCTGG+TGG | - | chr8_1:6149850-6149869 | Msa1174910:intron | 55.0% |
| TCTAATCTGGCAACAGGCGC+AGG | - | chr8_1:6150131-6150150 | Msa1174910:CDS | 55.0% | |
| AACAGGCGCAGGATACTACG+TGG | - | chr8_1:6150181-6150200 | Msa1174910:CDS | 55.0% | |
| GCAGGATACTACGTGGCAAC+AGG | - | chr8_1:6150188-6150207 | Msa1174910:CDS | 55.0% | |
| ! | GCTCCGTGCTGCTAAACAAC+AGG | - | chr8_1:6150337-6150356 | Msa1174910:intron | 55.0% |
| TGGAAGAGGTTGCACAAGGG+AGG | - | chr8_1:6150447-6150466 | Msa1174910:intron | 55.0% | |
| GCACAAGGGAGGATTTGGAC+CGG | - | chr8_1:6150458-6150477 | Msa1174910:intron | 55.0% | |
| TGCGCCAATCCTCCCCCTTA+AGG | + | chr8_1:6148897-6148916 | None:intergenic | 60.0% | |
| ! | AAGGGGGAGGATTGGCGCAT+CGG | - | chr8_1:6148898-6148917 | Msa1174910:intron | 60.0% |
| !! | CAAATGGTGGGTCCCCTTCC+CGG | - | chr8_1:6149015-6149034 | Msa1174910:intron | 60.0% |
| CGCATATGCAGAGTCCGGGA+AGG | + | chr8_1:6149032-6149051 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAGAGTCC+GGG | + | chr8_1:6149036-6149055 | None:intergenic | 60.0% | |
| GCTCCCGCATATGCAGAGTC+CGG | + | chr8_1:6149037-6149056 | None:intergenic | 60.0% | |
| !! | GCATTTGGGTGCTGGTGGTC+AGG | - | chr8_1:6149855-6149874 | Msa1174910:intron | 60.0% |
| TCTGATCTGGCAACAGGCGC+AGG | - | chr8_1:6150170-6150189 | Msa1174910:CDS | 60.0% | |
| TACTACGTGGCAACAGGCGC+AGG | - | chr8_1:6150194-6150213 | Msa1174910:CDS | 60.0% | |
| GAGCTCTCCTACTCTTCCCG+TGG | - | chr8_1:6150593-6150612 | Msa1174910:CDS | 60.0% | |
| CGGGAAGGGGACCCACCATT+TGG | + | chr8_1:6149017-6149036 | None:intergenic | 65.0% | |
| ! | TGCTGCTCAAAGCGCCCTGC+AGG | - | chr8_1:6149571-6149590 | Msa1174910:intron | 65.0% |
| !! | TGGGTGCTGGTGGTCAGGTC+TGG | - | chr8_1:6149860-6149879 | Msa1174910:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 6148099 | 6150664 | 6148099 | ID=Msa1174910;Name=Msa1174910 |
| chr8_1 | mRNA | 6148099 | 6150664 | 6148099 | ID=Msa1174910-mRNA-1;Parent=Msa1174910;Name=Msa1174910-mRNA-1;_AED=0.29;_eAED=0.31;_QI=0|0.33|0.25|1|1|1|4|0|314 |
| chr8_1 | exon | 6150574 | 6150664 | 6150574 | ID=Msa1174910-mRNA-1:exon:2142;Parent=Msa1174910-mRNA-1 |
| chr8_1 | exon | 6150122 | 6150240 | 6150122 | ID=Msa1174910-mRNA-1:exon:2141;Parent=Msa1174910-mRNA-1 |
| chr8_1 | exon | 6149273 | 6149408 | 6149273 | ID=Msa1174910-mRNA-1:exon:2140;Parent=Msa1174910-mRNA-1 |
| chr8_1 | exon | 6148099 | 6148697 | 6148099 | ID=Msa1174910-mRNA-1:exon:2139;Parent=Msa1174910-mRNA-1 |
| chr8_1 | CDS | 6150574 | 6150664 | 6150574 | ID=Msa1174910-mRNA-1:cds;Parent=Msa1174910-mRNA-1 |
| chr8_1 | CDS | 6150122 | 6150240 | 6150122 | ID=Msa1174910-mRNA-1:cds;Parent=Msa1174910-mRNA-1 |
| chr8_1 | CDS | 6149273 | 6149408 | 6149273 | ID=Msa1174910-mRNA-1:cds;Parent=Msa1174910-mRNA-1 |
| chr8_1 | CDS | 6148099 | 6148697 | 6148099 | ID=Msa1174910-mRNA-1:cds;Parent=Msa1174910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
