Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134400 | XP_013469748.1 | 91.011 | 178 | 14 | 1 | 21 | 196 | 20 | 197 | 1.25e-105 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134400 | sp|P11432|ELI_PEA | 79.695 | 197 | 38 | 2 | 1 | 196 | 1 | 196 | 2.23e-102 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134400 | A0A072VQ49 | 91.011 | 178 | 14 | 1 | 21 | 196 | 20 | 197 | 5.99e-106 | 311 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0134400 | 0.821592 | 3.719219e-53 | -8.615850e-47 |
| Msa0014970 | Msa0134400 | 0.825843 | 3.756902e-54 | -8.615850e-47 |
| Msa0021710 | Msa0134400 | 0.832460 | 9.334693e-56 | -8.615850e-47 |
| Msa0027030 | Msa0134400 | 0.813317 | 2.721169e-51 | -8.615850e-47 |
| Msa0032450 | Msa0134400 | 0.836971 | 6.841794e-57 | -8.615850e-47 |
| Msa0039920 | Msa0134400 | 0.913992 | 3.229730e-84 | -8.615850e-47 |
| Msa0040090 | Msa0134400 | 0.928271 | 3.656310e-92 | -8.615850e-47 |
| Msa0041780 | Msa0134400 | 0.816191 | 6.278884e-52 | -8.615850e-47 |
| Msa0046050 | Msa0134400 | 0.806064 | 9.862316e-50 | -8.615850e-47 |
| Msa0057740 | Msa0134400 | 0.811469 | 6.891597e-51 | -8.615850e-47 |
| Msa0080620 | Msa0134400 | 0.835113 | 2.026564e-56 | -8.615850e-47 |
| Msa0087130 | Msa0134400 | 0.830580 | 2.710318e-55 | -8.615850e-47 |
| Msa0087580 | Msa0134400 | 0.911727 | 4.383312e-83 | -8.615850e-47 |
| Msa0087780 | Msa0134400 | 0.951311 | 2.666763e-109 | -8.615850e-47 |
| Msa0087790 | Msa0134400 | 0.914197 | 2.541751e-84 | -8.615850e-47 |
| Msa0096020 | Msa0134400 | 0.820136 | 8.044068e-53 | -8.615850e-47 |
| Msa0096510 | Msa0134400 | 0.829957 | 3.847873e-55 | -8.615850e-47 |
| Msa0098800 | Msa0134400 | 0.824397 | 8.252880e-54 | -8.615850e-47 |
| Msa0103060 | Msa0134400 | 0.800210 | 1.603571e-48 | -8.615850e-47 |
| Msa0108500 | Msa0134400 | 0.823861 | 1.102630e-53 | -8.615850e-47 |
| Msa0116950 | Msa0134400 | 0.808587 | 2.878946e-50 | -8.615850e-47 |
| Msa0117300 | Msa0134400 | 0.809557 | 1.783635e-50 | -8.615850e-47 |
| Msa0120320 | Msa0134400 | 0.810971 | 8.839682e-51 | -8.615850e-47 |
| Msa0132920 | Msa0134400 | 0.809245 | 2.081570e-50 | -8.615850e-47 |
| Msa0133450 | Msa0134400 | 0.864657 | 1.038891e-64 | -8.615850e-47 |
| Msa0134300 | Msa0134400 | 0.912619 | 1.581834e-83 | -8.615850e-47 |
| Msa0134380 | Msa0134400 | 0.918538 | 1.377165e-86 | -8.615850e-47 |
| Msa0134390 | Msa0134400 | 0.938563 | 5.474333e-99 | -8.615850e-47 |
| Msa0134400 | Msa0134410 | 0.885267 | 9.421493e-72 | -8.615850e-47 |
| Msa0134400 | Msa0134420 | 0.924158 | 1.023541e-89 | -8.615850e-47 |
| Msa0134400 | Msa0137010 | 0.837587 | 4.761435e-57 | -8.615850e-47 |
| Msa0134400 | Msa0160470 | 0.818671 | 1.735644e-52 | -8.615850e-47 |
| Msa0134400 | Msa0160650 | 0.815036 | 1.135318e-51 | -8.615850e-47 |
| Msa0134400 | Msa0163530 | 0.804075 | 2.570881e-49 | -8.615850e-47 |
| Msa0134400 | Msa0167150 | 0.810307 | 1.230172e-50 | -8.615850e-47 |
| Msa0134400 | Msa0180590 | 0.918885 | 8.958719e-87 | -8.615850e-47 |
| Msa0134400 | Msa0180600 | 0.912846 | 1.219604e-83 | -8.615850e-47 |
| Msa0134400 | Msa0180780 | 0.906066 | 2.204877e-80 | -8.615850e-47 |
| Msa0134400 | Msa0186510 | 0.873060 | 1.969653e-67 | -8.615850e-47 |
| Msa0134400 | Msa0195140 | 0.808217 | 3.451979e-50 | -8.615850e-47 |
| Msa0134400 | Msa0197730 | 0.810067 | 1.386043e-50 | -8.615850e-47 |
| Msa0134400 | Msa0229750 | 0.829270 | 5.653737e-55 | -8.615850e-47 |
| Msa0134400 | Msa0230980 | 0.825401 | 4.783970e-54 | -8.615850e-47 |
| Msa0134400 | Msa0238960 | 0.837672 | 4.528327e-57 | -8.615850e-47 |
| Msa0134400 | Msa0243160 | 0.814346 | 1.614439e-51 | -8.615850e-47 |
| Msa0134400 | Msa0270460 | 0.832758 | 7.873482e-56 | -8.615850e-47 |
| Msa0134400 | Msa0276800 | 0.818738 | 1.675726e-52 | -8.615850e-47 |
| Msa0134400 | Msa0309060 | 0.813210 | 2.873018e-51 | -8.615850e-47 |
| Msa0134400 | Msa0316720 | 0.825922 | 3.599071e-54 | -8.615850e-47 |
| Msa0134400 | Msa0317360 | 0.830634 | 2.629659e-55 | -8.615850e-47 |
| Msa0134400 | Msa0335860 | 0.809647 | 1.706450e-50 | -8.615850e-47 |
| Msa0134400 | Msa0358720 | 0.816358 | 5.762105e-52 | -8.615850e-47 |
| Msa0134400 | Msa0371350 | 0.819731 | 9.958077e-53 | -8.615850e-47 |
| Msa0134400 | Msa0372990 | 0.822796 | 1.955951e-53 | -8.615850e-47 |
| Msa0134400 | Msa0375570 | 0.810924 | 9.049479e-51 | -8.615850e-47 |
| Msa0134400 | Msa0378670 | 0.840622 | 7.784317e-58 | -8.615850e-47 |
| Msa0134400 | Msa0378700 | 0.846961 | 1.563209e-59 | -8.615850e-47 |
| Msa0134400 | Msa0385770 | 0.865410 | 6.028202e-65 | -8.615850e-47 |
| Msa0134400 | Msa0387740 | 0.828445 | 8.957269e-55 | -8.615850e-47 |
| Msa0134400 | Msa0393140 | 0.811476 | 6.870478e-51 | -8.615850e-47 |
| Msa0134400 | Msa0403720 | 0.803529 | 3.338549e-49 | -8.615850e-47 |
| Msa0134400 | Msa0404880 | 0.812467 | 4.178603e-51 | -8.615850e-47 |
| Msa0134400 | Msa0415200 | 0.810831 | 9.479668e-51 | -8.615850e-47 |
| Msa0134400 | Msa0419040 | 0.808101 | 3.654708e-50 | -8.615850e-47 |
| Msa0134400 | Msa0419420 | 0.822265 | 2.598862e-53 | -8.615850e-47 |
| Msa0134400 | Msa0424220 | 0.818482 | 1.915184e-52 | -8.615850e-47 |
| Msa0134400 | Msa0428330 | 0.856632 | 2.822286e-62 | -8.615850e-47 |
| Msa0134400 | Msa0430040 | 0.819455 | 1.151216e-52 | -8.615850e-47 |
| Msa0134400 | Msa0431940 | 0.841199 | 5.492982e-58 | -8.615850e-47 |
| Msa0134400 | Msa0433270 | 0.808865 | 2.510859e-50 | -8.615850e-47 |
| Msa0134400 | Msa0434090 | -0.807884 | 4.064178e-50 | -8.615850e-47 |
| Msa0134400 | Msa0436590 | 0.805185 | 1.508303e-49 | -8.615850e-47 |
| Msa0134400 | Msa0436600 | 0.819334 | 1.226384e-52 | -8.615850e-47 |
| Msa0134400 | Msa0436610 | 0.814807 | 1.276252e-51 | -8.615850e-47 |
| Msa0134400 | Msa0437790 | 0.811175 | 7.983742e-51 | -8.615850e-47 |
| Msa0134400 | Msa0443250 | 0.801079 | 1.066148e-48 | -8.615850e-47 |
| Msa0134400 | Msa0456480 | 0.821637 | 3.631750e-53 | -8.615850e-47 |
| Msa0134400 | Msa0460220 | 0.811488 | 6.828886e-51 | -8.615850e-47 |
| Msa0134400 | Msa0469770 | 0.808851 | 2.527178e-50 | -8.615850e-47 |
| Msa0134400 | Msa0469840 | 0.824850 | 6.453690e-54 | -8.615850e-47 |
| Msa0134400 | Msa0477900 | -0.817271 | 3.596234e-52 | -8.615850e-47 |
| Msa0134400 | Msa0481050 | 0.822946 | 1.803939e-53 | -8.615850e-47 |
| Msa0134400 | Msa0500490 | 0.825335 | 4.959031e-54 | -8.615850e-47 |
| Msa0134400 | Msa0501350 | 0.807045 | 6.122431e-50 | -8.615850e-47 |
| Msa0134400 | Msa0511600 | 0.859282 | 4.608366e-63 | -8.615850e-47 |
| Msa0134400 | Msa0515420 | 0.819669 | 1.028728e-52 | -8.615850e-47 |
| Msa0134400 | Msa0520810 | 0.823427 | 1.393228e-53 | -8.615850e-47 |
| Msa0134400 | Msa0521940 | -0.834119 | 3.603530e-56 | -8.615850e-47 |
| Msa0134400 | Msa0525180 | 0.806432 | 8.250429e-50 | -8.615850e-47 |
| Msa0134400 | Msa0530250 | 0.810735 | 9.942108e-51 | -8.615850e-47 |
| Msa0134400 | Msa0552660 | 0.806198 | 9.241644e-50 | -8.615850e-47 |
| Msa0134400 | Msa0555510 | 0.803427 | 3.504172e-49 | -8.615850e-47 |
| Msa0134400 | Msa0556450 | 0.801696 | 7.972353e-49 | -8.615850e-47 |
| Msa0134400 | Msa0566090 | 0.810097 | 1.365403e-50 | -8.615850e-47 |
| Msa0134400 | Msa0580540 | 0.849391 | 3.331926e-60 | -8.615850e-47 |
| Msa0134400 | Msa0598470 | 0.820439 | 6.856497e-53 | -8.615850e-47 |
| Msa0134400 | Msa0604640 | 0.804972 | 1.671202e-49 | -8.615850e-47 |
| Msa0134400 | Msa0607620 | 0.801035 | 1.088660e-48 | -8.615850e-47 |
| Msa0134400 | Msa0608940 | 0.834470 | 2.941711e-56 | -8.615850e-47 |
| Msa0134400 | Msa0615850 | 0.806028 | 1.003346e-49 | -8.615850e-47 |
| Msa0134400 | Msa0617120 | 0.813158 | 2.949409e-51 | -8.615850e-47 |
| Msa0134400 | Msa0621780 | 0.856752 | 2.600853e-62 | -8.615850e-47 |
| Msa0134400 | Msa0630850 | 0.829202 | 5.874257e-55 | -8.615850e-47 |
| Msa0134400 | Msa0651990 | 0.801276 | 9.716894e-49 | -8.615850e-47 |
| Msa0134400 | Msa0677250 | 0.829561 | 4.805219e-55 | -8.615850e-47 |
| Msa0134400 | Msa0691740 | 0.802486 | 5.483745e-49 | -8.615850e-47 |
| Msa0134400 | Msa0698900 | 0.810503 | 1.115987e-50 | -8.615850e-47 |
| Msa0134400 | Msa0701460 | 0.811173 | 7.993435e-51 | -8.615850e-47 |
| Msa0134400 | Msa0701530 | 0.813588 | 2.372903e-51 | -8.615850e-47 |
| Msa0134400 | Msa0702360 | 0.806902 | 6.564111e-50 | -8.615850e-47 |
| Msa0134400 | Msa0702560 | 0.812883 | 3.388717e-51 | -8.615850e-47 |
| Msa0134400 | Msa0704780 | 0.808507 | 2.994283e-50 | -8.615850e-47 |
| Msa0134400 | Msa0705050 | 0.800974 | 1.120300e-48 | -8.615850e-47 |
| Msa0134400 | Msa0705130 | 0.837078 | 6.426143e-57 | -8.615850e-47 |
| Msa0134400 | Msa0705810 | 0.826763 | 2.268751e-54 | -8.615850e-47 |
| Msa0134400 | Msa0712670 | 0.870134 | 1.835304e-66 | -8.615850e-47 |
| Msa0134400 | Msa0714060 | 0.833551 | 4.998321e-56 | -8.615850e-47 |
| Msa0134400 | Msa0714200 | 0.845892 | 3.057631e-59 | -8.615850e-47 |
| Msa0134400 | Msa0730250 | 0.801581 | 8.417886e-49 | -8.615850e-47 |
| Msa0134400 | Msa0734190 | 0.800686 | 1.282975e-48 | -8.615850e-47 |
| Msa0134400 | Msa0748980 | 0.843037 | 1.792898e-58 | -8.615850e-47 |
| Msa0134400 | Msa0752830 | 0.847659 | 1.005119e-59 | -8.615850e-47 |
| Msa0134400 | Msa0754350 | 0.821754 | 3.412919e-53 | -8.615850e-47 |
| Msa0134400 | Msa0754790 | 0.816704 | 4.821368e-52 | -8.615850e-47 |
| Msa0134400 | Msa0754840 | 0.824599 | 7.396383e-54 | -8.615850e-47 |
| Msa0134400 | Msa0756440 | 0.864787 | 9.457511e-65 | -8.615850e-47 |
| Msa0134400 | Msa0770020 | 0.801071 | 1.070621e-48 | -8.615850e-47 |
| Msa0134400 | Msa0770540 | 0.815352 | 9.660736e-52 | -8.615850e-47 |
| Msa0134400 | Msa0775420 | 0.806660 | 7.384146e-50 | -8.615850e-47 |
| Msa0134400 | Msa0776290 | 0.802090 | 6.615351e-49 | -8.615850e-47 |
| Msa0134400 | Msa0776590 | 0.867128 | 1.719128e-65 | -8.615850e-47 |
| Msa0134400 | Msa0786330 | 0.800728 | 1.257491e-48 | -8.615850e-47 |
| Msa0134400 | Msa0790650 | 0.801195 | 1.009746e-48 | -8.615850e-47 |
| Msa0134400 | Msa0793100 | 0.801204 | 1.005294e-48 | -8.615850e-47 |
| Msa0134400 | Msa0795710 | 0.855468 | 6.181100e-62 | -8.615850e-47 |
| Msa0134400 | Msa0812800 | 0.803753 | 2.999062e-49 | -8.615850e-47 |
| Msa0134400 | Msa0813630 | 0.831319 | 1.785943e-55 | -8.615850e-47 |
| Msa0134400 | Msa0822800 | 0.815452 | 9.178852e-52 | -8.615850e-47 |
| Msa0134400 | Msa0825520 | 0.850979 | 1.196310e-60 | -8.615850e-47 |
| Msa0134400 | Msa0833450 | 0.833209 | 6.080445e-56 | -8.615850e-47 |
| Msa0134400 | Msa0833910 | 0.827164 | 1.819437e-54 | -8.615850e-47 |
| Msa0134400 | Msa0834160 | 0.819425 | 1.169086e-52 | -8.615850e-47 |
| Msa0134400 | Msa0835550 | 0.858165 | 9.934151e-63 | -8.615850e-47 |
| Msa0134400 | Msa0854190 | 0.802975 | 4.346553e-49 | -8.615850e-47 |
| Msa0134400 | Msa0864730 | 0.853694 | 2.017091e-61 | -8.615850e-47 |
| Msa0134400 | Msa0864750 | 0.850586 | 1.543510e-60 | -8.615850e-47 |
| Msa0134400 | Msa0866510 | 0.851078 | 1.121886e-60 | -8.615850e-47 |
| Msa0134400 | Msa0899080 | 0.848655 | 5.337592e-60 | -8.615850e-47 |
| Msa0134400 | Msa0899730 | 0.823473 | 1.359400e-53 | -8.615850e-47 |
| Msa0134400 | Msa0912110 | 0.828677 | 7.871769e-55 | -8.615850e-47 |
| Msa0134400 | Msa0913120 | 0.803285 | 3.750102e-49 | -8.615850e-47 |
| Msa0134400 | Msa0927890 | 0.838319 | 3.086266e-57 | -8.615850e-47 |
| Msa0134400 | Msa0961200 | 0.825987 | 3.473502e-54 | -8.615850e-47 |
| Msa0134400 | Msa0967250 | 0.813876 | 2.049624e-51 | -8.615850e-47 |
| Msa0134400 | Msa0967260 | 0.839586 | 1.450266e-57 | -8.615850e-47 |
| Msa0134400 | Msa0968240 | 0.805540 | 1.270824e-49 | -8.615850e-47 |
| Msa0134400 | Msa0968960 | 0.802867 | 4.576713e-49 | -8.615850e-47 |
| Msa0134400 | Msa0978290 | 0.820793 | 5.686257e-53 | -8.615850e-47 |
| Msa0134400 | Msa0986620 | 0.803091 | 4.112470e-49 | -8.615850e-47 |
| Msa0134400 | Msa0995660 | 0.824364 | 8.403654e-54 | -8.615850e-47 |
| Msa0134400 | Msa0998940 | 0.829183 | 5.935272e-55 | -8.615850e-47 |
| Msa0134400 | Msa0999480 | 0.820482 | 6.701881e-53 | -8.615850e-47 |
| Msa0134400 | Msa0999590 | 0.820114 | 8.136843e-53 | -8.615850e-47 |
| Msa0134400 | Msa1019370 | 0.838637 | 2.555581e-57 | -8.615850e-47 |
| Msa0134400 | Msa1036020 | -0.840970 | 6.306376e-58 | -8.615850e-47 |
| Msa0134400 | Msa1042130 | -0.830339 | 3.104254e-55 | -8.615850e-47 |
| Msa0134400 | Msa1069440 | 0.802021 | 6.837338e-49 | -8.615850e-47 |
| Msa0134400 | Msa1076280 | -0.835109 | 2.032233e-56 | -8.615850e-47 |
| Msa0134400 | Msa1083140 | 0.800987 | 1.113634e-48 | -8.615850e-47 |
| Msa0134400 | Msa1088740 | 0.839696 | 1.357968e-57 | -8.615850e-47 |
| Msa0134400 | Msa1101300 | 0.801850 | 7.410286e-49 | -8.615850e-47 |
| Msa0134400 | Msa1101610 | 0.829577 | 4.761835e-55 | -8.615850e-47 |
| Msa0134400 | Msa1122550 | -0.822324 | 2.518107e-53 | -8.615850e-47 |
| Msa0134400 | Msa1124880 | -0.822868 | 1.881673e-53 | -8.615850e-47 |
| Msa0134400 | Msa1133440 | 0.844288 | 8.293633e-59 | -8.615850e-47 |
| Msa0134400 | Msa1140480 | 0.811262 | 7.645709e-51 | -8.615850e-47 |
| Msa0134400 | Msa1143860 | 0.822918 | 1.831514e-53 | -8.615850e-47 |
| Msa0134400 | Msa1147870 | 0.818167 | 2.257440e-52 | -8.615850e-47 |
| Msa0134400 | Msa1150130 | 0.813108 | 3.024153e-51 | -8.615850e-47 |
| Msa0134400 | Msa1163340 | -0.807470 | 4.975055e-50 | -8.615850e-47 |
| Msa0134400 | Msa1167500 | -0.815930 | 7.181777e-52 | -8.615850e-47 |
| Msa0134400 | Msa1187810 | 0.816645 | 4.969519e-52 | -8.615850e-47 |
| Msa0134400 | Msa1190350 | 0.813182 | 2.913819e-51 | -8.615850e-47 |
| Msa0134400 | Msa1195860 | 0.800240 | 1.581436e-48 | -8.615850e-47 |
| Msa0134400 | Msa1203840 | 0.858575 | 7.500286e-63 | -8.615850e-47 |
| Msa0134400 | Msa1203860 | 0.869060 | 4.108762e-66 | -8.615850e-47 |
| Msa0134400 | Msa1209240 | 0.817468 | 3.246433e-52 | -8.615850e-47 |
| Msa0134400 | Msa1209800 | 0.813879 | 2.046562e-51 | -8.615850e-47 |
| Msa0134400 | Msa1219060 | 0.850091 | 2.124627e-60 | -8.615850e-47 |
| Msa0134400 | Msa1222400 | -0.804550 | 2.047517e-49 | -8.615850e-47 |
| Msa0134400 | Msa1224820 | 0.810821 | 9.524744e-51 | -8.615850e-47 |
| Msa0134400 | Msa1225140 | 0.820883 | 5.418982e-53 | -8.615850e-47 |
| Msa0134400 | Msa1228280 | 0.806754 | 7.053598e-50 | -8.615850e-47 |
| Msa0134400 | Msa1228330 | 0.807933 | 3.967363e-50 | -8.615850e-47 |
| Msa0134400 | Msa1236860 | 0.809795 | 1.585603e-50 | -8.615850e-47 |
| Msa0134400 | Msa1242990 | 0.812379 | 4.368087e-51 | -8.615850e-47 |
| Msa0134400 | Msa1243630 | 0.845007 | 5.309672e-59 | -8.615850e-47 |
| Msa0134400 | Msa1244220 | 0.846637 | 1.916295e-59 | -8.615850e-47 |
| Msa0134400 | Msa1270860 | 0.812833 | 3.475378e-51 | -8.615850e-47 |
| Msa0134400 | Msa1277830 | 0.800213 | 1.601380e-48 | -8.615850e-47 |
| Msa0134400 | Msa1283120 | 0.832160 | 1.107753e-55 | -8.615850e-47 |
| Msa0134400 | Msa1295220 | 0.810479 | 1.129560e-50 | -8.615850e-47 |
| Msa0134400 | Msa1296270 | 0.847058 | 1.469839e-59 | -8.615850e-47 |
| Msa0134400 | Msa1297220 | 0.805053 | 1.607137e-49 | -8.615850e-47 |
| Msa0134400 | Msa1308010 | 0.815592 | 8.541806e-52 | -8.615850e-47 |
| Msa0134400 | Msa1317240 | 0.819640 | 1.044659e-52 | -8.615850e-47 |
| Msa0134400 | Msa1320660 | 0.802435 | 5.617359e-49 | -8.615850e-47 |
| Msa0134400 | Msa1330910 | 0.865752 | 4.701281e-65 | -8.615850e-47 |
| Msa0134400 | Msa1332690 | 0.841494 | 4.592374e-58 | -8.615850e-47 |
| Msa0134400 | Msa1335210 | 0.821130 | 4.755512e-53 | -8.615850e-47 |
| Msa0134400 | Msa1342400 | 0.805077 | 1.588617e-49 | -8.615850e-47 |
| Msa0134400 | Msa1346220 | 0.818162 | 2.263057e-52 | -8.615850e-47 |
| Msa0134400 | Msa1346340 | 0.807166 | 5.771897e-50 | -8.615850e-47 |
| Msa0134400 | Msa1348330 | -0.844097 | 9.335944e-59 | -8.615850e-47 |
| Msa0134400 | Msa1349640 | 0.830418 | 2.969602e-55 | -8.615850e-47 |
| Msa0134400 | Msa1349850 | 0.806176 | 9.342607e-50 | -8.615850e-47 |
| Msa0134400 | Msa1356730 | 0.835510 | 1.609027e-56 | -8.615850e-47 |
| Msa0134400 | Msa1364520 | 0.804609 | 1.989721e-49 | -8.615850e-47 |
| Msa0134400 | Msa1364850 | 0.847669 | 9.991617e-60 | -8.615850e-47 |
| Msa0134400 | Msa1368660 | 0.837217 | 5.919376e-57 | -8.615850e-47 |
| Msa0134400 | Msa1369180 | 0.810221 | 1.283713e-50 | -8.615850e-47 |
| Msa0134400 | Msa1369390 | 0.818493 | 1.904678e-52 | -8.615850e-47 |
| Msa0134400 | Msa1373390 | 0.805106 | 1.566622e-49 | -8.615850e-47 |
| Msa0134400 | Msa1376010 | 0.820249 | 7.577634e-53 | -8.615850e-47 |
| Msa0134400 | Msa1382750 | 0.811922 | 5.493230e-51 | -8.615850e-47 |
| Msa0134400 | Msa1384620 | 0.851203 | 1.033985e-60 | -8.615850e-47 |
| Msa0134400 | Msa1388070 | 0.829843 | 4.103401e-55 | -8.615850e-47 |
| Msa0134400 | Msa1388270 | 0.843628 | 1.246940e-58 | -8.615850e-47 |
| Msa0134400 | Msa1388520 | 0.802948 | 4.403558e-49 | -8.615850e-47 |
| Msa0134400 | Msa1392570 | 0.800614 | 1.326968e-48 | -8.615850e-47 |
| Msa0134400 | Msa1403950 | 0.839677 | 1.373247e-57 | -8.615850e-47 |
| Msa0134400 | Msa1413900 | 0.805184 | 1.508763e-49 | -8.615850e-47 |
| Msa0134400 | Msa1414000 | 0.819219 | 1.302529e-52 | -8.615850e-47 |
| Msa0134400 | Msa1418840 | 0.818282 | 2.125951e-52 | -8.615850e-47 |
| Msa0134400 | Msa1420600 | 0.805734 | 1.156910e-49 | -8.615850e-47 |
| Msa0134400 | Msa1430630 | 0.840355 | 9.138994e-58 | -8.615850e-47 |
| Msa0134400 | Msa1431240 | 0.819604 | 1.064605e-52 | -8.615850e-47 |
| Msa0134400 | Msa1435690 | 0.847727 | 9.630551e-60 | -8.615850e-47 |
| Msa0134400 | Msa1436660 | 0.821294 | 4.358634e-53 | -8.615850e-47 |
| Msa0134400 | Msa1446220 | 0.827266 | 1.719936e-54 | -8.615850e-47 |
| Msa0134400 | Msa1451690 | 0.885261 | 9.468182e-72 | -8.615850e-47 |
| Msa0134400 | Msa1452200 | 0.804416 | 2.182696e-49 | -8.615850e-47 |
| Msa0134400 | Msa1459630 | 0.819200 | 1.315803e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134400 | MtrunA17_Chr1g0204681 | 91.011 | 178 | 14 | 1 | 21 | 196 | 20 | 197 | 1.15e-109 | 311 |
| Msa0134400 | MtrunA17_Chr1g0204521 | 89.899 | 198 | 18 | 1 | 1 | 196 | 1 | 198 | 2.69e-108 | 308 |
| Msa0134400 | MtrunA17_Chr1g0204671 | 90.000 | 200 | 16 | 1 | 1 | 196 | 1 | 200 | 4.45e-105 | 300 |
| Msa0134400 | MtrunA17_Chr1g0204721 | 80.203 | 197 | 27 | 2 | 1 | 196 | 1 | 186 | 7.45e-98 | 281 |
| Msa0134400 | MtrunA17_Chr1g0204691 | 77.778 | 180 | 28 | 2 | 18 | 196 | 14 | 182 | 1.08e-97 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134400 | AT3G22840.1 | 55.172 | 174 | 56 | 2 | 35 | 196 | 32 | 195 | 2.42e-60 | 187 |
| Msa0134400 | AT4G14690.1 | 57.895 | 171 | 69 | 2 | 29 | 196 | 23 | 193 | 9.26e-59 | 183 |
Find 48 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGGAGTCCCATGGTTCT+TGG | 0.283070 | 1_3:+65912084 | Msa0134400:CDS |
| GGTGGAGTCCCATGGTTCTT+GGG | 0.285032 | 1_3:+65912085 | Msa0134400:CDS |
| GGTGATGATGATGGTGTAAT+TGG | 0.299898 | 1_3:-65911752 | None:intergenic |
| CCAGCACCTGAGAGAATTAA+TGG | 0.300603 | 1_3:+65911980 | Msa0134400:CDS |
| GGTTTGTTTGATCAAATATC+TGG | 0.314167 | 1_3:+65912061 | Msa0134400:CDS |
| TATGTTGGGTTTGATTGCTT+TGG | 0.357312 | 1_3:+65912225 | Msa0134400:CDS |
| ATTGGGTCTACAGGCACCTT+TGG | 0.360861 | 1_3:-65911734 | None:intergenic |
| AATGGAAGGTTGGCTATGAT+TGG | 0.383969 | 1_3:+65911998 | Msa0134400:CDS |
| CCATTAATTCTCTCAGGTGC+TGG | 0.425775 | 1_3:-65911980 | None:intergenic |
| GAATGGAAGAATAGCTATGT+TGG | 0.436992 | 1_3:+65912210 | Msa0134400:CDS |
| AGCTCTAGCCCTGCTAGAAA+TGG | 0.446558 | 1_3:-65911464 | None:intergenic |
| TGTGGTGTTGGTGATGATGA+TGG | 0.453563 | 1_3:-65911761 | None:intergenic |
| AACCTTCCATTAATTCTCTC+AGG | 0.456054 | 1_3:-65911986 | None:intergenic |
| GTGATGATGATGGTGTAATT+GGG | 0.461935 | 1_3:-65911751 | None:intergenic |
| CATTGAGCACCATTTCTAGC+AGG | 0.478291 | 1_3:+65911455 | Msa0134400:CDS |
| TGTCCTCAGATGCTGAGTTA+TGG | 0.479277 | 1_3:+65912188 | Msa0134400:CDS |
| GTGGAGTCCCATGGTTCTTG+GGG | 0.481099 | 1_3:+65912086 | Msa0134400:CDS |
| AATGGAAGAATAGCTATGTT+GGG | 0.501527 | 1_3:+65912211 | Msa0134400:CDS |
| GTGTAGGCTGGTTGTGGTGT+TGG | 0.503331 | 1_3:-65911773 | None:intergenic |
| AGTGTGGAGTCTAAGTCAAA+AGG | 0.525000 | 1_3:+65912160 | Msa0134400:CDS |
| AACCTTATTTACCTCAGCCA+TGG | 0.525798 | 1_3:-65911557 | None:intergenic |
| CTAGCATTCCTTCTGAAGCT+AGG | 0.532093 | 1_3:-65911520 | None:intergenic |
| TTTGGTGAGCGAGTGTAGGC+TGG | 0.536506 | 1_3:-65911785 | None:intergenic |
| CACTTGTCCCCAAGAACCAT+GGG | 0.536973 | 1_3:-65912093 | None:intergenic |
| GGTGGAAATAGCAAATGGAC+AGG | 0.544893 | 1_3:+65912039 | Msa0134400:CDS |
| GAGCGAGTGTAGGCTGGTTG+TGG | 0.550985 | 1_3:-65911779 | None:intergenic |
| TTTGATCAAATATCTGGTGG+TGG | 0.551757 | 1_3:+65912067 | Msa0134400:CDS |
| TGAGAGAATTAATGGAAGGT+TGG | 0.551924 | 1_3:+65911988 | Msa0134400:CDS |
| GATGGTGTAATTGGGTCTAC+AGG | 0.568013 | 1_3:-65911743 | None:intergenic |
| TCAGATGCTGAGTTATGGAA+TGG | 0.568279 | 1_3:+65912193 | Msa0134400:CDS |
| TTGTTTGATCAAATATCTGG+TGG | 0.570609 | 1_3:+65912064 | Msa0134400:CDS |
| AAGCTAGGCATGTACACAGA+AGG | 0.579754 | 1_3:-65911505 | None:intergenic |
| ATTCCATAACTCAGCATCTG+AGG | 0.591329 | 1_3:-65912191 | None:intergenic |
| CTATAGAACTCTATTACACA+AGG | 0.596246 | 1_3:-65912276 | None:intergenic |
| TAGACTCCACACTAACACCT+TGG | 0.597870 | 1_3:-65912150 | None:intergenic |
| ATTGAGCACCATTTCTAGCA+GGG | 0.604034 | 1_3:+65911456 | Msa0134400:CDS |
| TAGCTTGAAAGTTCGATCCA+TGG | 0.604578 | 1_3:+65911540 | Msa0134400:CDS |
| ACACTTGTCCCCAAGAACCA+TGG | 0.606138 | 1_3:-65912094 | None:intergenic |
| AGAGCAGAAAGAGCAACCAA+AGG | 0.611218 | 1_3:+65911718 | Msa0134400:CDS |
| AGCCTACACTCGCTCACCAA+AGG | 0.611565 | 1_3:+65911787 | Msa0134400:CDS |
| AGCTAGGCATGTACACAGAA+GGG | 0.614155 | 1_3:-65911504 | None:intergenic |
| GAAAGTTCGATCCATGGCTG+AGG | 0.622095 | 1_3:+65911546 | Msa0134400:CDS |
| TGTACATGCCTAGCTTCAGA+AGG | 0.622254 | 1_3:+65911512 | Msa0134400:CDS |
| CACCTGAGAGAATTAATGGA+AGG | 0.651384 | 1_3:+65911984 | Msa0134400:CDS |
| TATCTGGTGGTGGAGTCCCA+TGG | 0.653372 | 1_3:+65912077 | Msa0134400:CDS |
| TACCTTTGGTGAGCGAGTGT+AGG | 0.653559 | 1_3:-65911789 | None:intergenic |
| GTGGAAATAGCAAATGGACA+GGG | 0.661963 | 1_3:+65912040 | Msa0134400:CDS |
| TATAGAACTCTATTACACAA+GGG | 0.699610 | 1_3:-65912275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAGATAAACAAAATTTA+AGG | + | chr1_3:65911580-65911599 | Msa0134400:intron | 10.0% |
| !! | ATAATATGTTTATGATTTAT+TGG | + | chr1_3:65911670-65911689 | Msa0134400:intron | 10.0% |
| !! | CATCATTATTATTTATTAAA+AGG | - | chr1_3:65911909-65911928 | None:intergenic | 10.0% |
| !! | AAATAATAATGATGAAAATA+TGG | + | chr1_3:65911915-65911934 | Msa0134400:intron | 10.0% |
| !! | TATAAGATAAACAAAATTTA+AGG | + | chr1_3:65911580-65911599 | Msa0134400:intron | 10.0% |
| !! | ATAATATGTTTATGATTTAT+TGG | + | chr1_3:65911670-65911689 | Msa0134400:intron | 10.0% |
| !! | CATCATTATTATTTATTAAA+AGG | - | chr1_3:65911909-65911928 | None:intergenic | 10.0% |
| !! | AAATAATAATGATGAAAATA+TGG | + | chr1_3:65911915-65911934 | Msa0134400:intron | 10.0% |
| !! | AAATCATAAACATATTATGT+TGG | - | chr1_3:65911668-65911687 | None:intergenic | 15.0% |
| !! | AAATCATAAACATATTATGT+TGG | - | chr1_3:65911668-65911687 | None:intergenic | 15.0% |
| !!! | ATTTTGCTAAGTACTAAATT+AGG | + | chr1_3:65911868-65911887 | Msa0134400:intron | 20.0% |
| !!! | ATTTTGCTAAGTACTAAATT+AGG | + | chr1_3:65911868-65911887 | Msa0134400:intron | 20.0% |
| !! | TATTATGTTGGTGATGATGA+AGG | - | chr1_3:65911656-65911675 | None:intergenic | 30.0% |
| TTTGTTACTATGCATACCTT+TGG | - | chr1_3:65911806-65911825 | None:intergenic | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | + | chr1_3:65912061-65912080 | Msa0134400:CDS | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | + | chr1_3:65912064-65912083 | Msa0134400:CDS | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | + | chr1_3:65912133-65912152 | Msa0134400:CDS | 30.0% |
| AATGGAAGAATAGCTATGTT+GGG | + | chr1_3:65912211-65912230 | Msa0134400:CDS | 30.0% | |
| ! | GCTTTTACAGAGTATGTTAA+GGG | + | chr1_3:65912247-65912266 | Msa0134400:CDS | 30.0% |
| !! | TATTATGTTGGTGATGATGA+AGG | - | chr1_3:65911656-65911675 | None:intergenic | 30.0% |
| TTTGTTACTATGCATACCTT+TGG | - | chr1_3:65911806-65911825 | None:intergenic | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | + | chr1_3:65912061-65912080 | Msa0134400:CDS | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | + | chr1_3:65912064-65912083 | Msa0134400:CDS | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | + | chr1_3:65912133-65912152 | Msa0134400:CDS | 30.0% |
| AATGGAAGAATAGCTATGTT+GGG | + | chr1_3:65912211-65912230 | Msa0134400:CDS | 30.0% | |
| ! | GCTTTTACAGAGTATGTTAA+GGG | + | chr1_3:65912247-65912266 | Msa0134400:CDS | 30.0% |
| GATTGCGTGTTACATTATTC+AGG | + | chr1_3:65911694-65911713 | Msa0134400:intron | 35.0% | |
| !! | GTGATGATGATGGTGTAATT+GGG | - | chr1_3:65911754-65911773 | None:intergenic | 35.0% |
| ! | CACAAAGTTTTCGGATTTGA+TGG | + | chr1_3:65911946-65911965 | Msa0134400:CDS | 35.0% |
| !! | TTTTCGGATTTGATGGCTTT+TGG | + | chr1_3:65911953-65911972 | Msa0134400:CDS | 35.0% |
| AACCTTCCATTAATTCTCTC+AGG | - | chr1_3:65911989-65912008 | None:intergenic | 35.0% | |
| TGAGAGAATTAATGGAAGGT+TGG | + | chr1_3:65911988-65912007 | Msa0134400:CDS | 35.0% | |
| !!! | ATTGGTTTTGTAGCTGCAAT+GGG | + | chr1_3:65912016-65912035 | Msa0134400:CDS | 35.0% |
| TTTGATCAAATATCTGGTGG+TGG | + | chr1_3:65912067-65912086 | Msa0134400:CDS | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | - | chr1_3:65912145-65912164 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | + | chr1_3:65912144-65912163 | Msa0134400:CDS | 35.0% |
| GAATGGAAGAATAGCTATGT+TGG | + | chr1_3:65912210-65912229 | Msa0134400:CDS | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | + | chr1_3:65912225-65912244 | Msa0134400:CDS | 35.0% | |
| ! | GGCTTTTACAGAGTATGTTA+AGG | + | chr1_3:65912246-65912265 | Msa0134400:CDS | 35.0% |
| GATTGCGTGTTACATTATTC+AGG | + | chr1_3:65911694-65911713 | Msa0134400:intron | 35.0% | |
| !! | GTGATGATGATGGTGTAATT+GGG | - | chr1_3:65911754-65911773 | None:intergenic | 35.0% |
| ! | CACAAAGTTTTCGGATTTGA+TGG | + | chr1_3:65911946-65911965 | Msa0134400:CDS | 35.0% |
| !! | TTTTCGGATTTGATGGCTTT+TGG | + | chr1_3:65911953-65911972 | Msa0134400:CDS | 35.0% |
| AACCTTCCATTAATTCTCTC+AGG | - | chr1_3:65911989-65912008 | None:intergenic | 35.0% | |
| TGAGAGAATTAATGGAAGGT+TGG | + | chr1_3:65911988-65912007 | Msa0134400:CDS | 35.0% | |
| !!! | ATTGGTTTTGTAGCTGCAAT+GGG | + | chr1_3:65912016-65912035 | Msa0134400:CDS | 35.0% |
| TTTGATCAAATATCTGGTGG+TGG | + | chr1_3:65912067-65912086 | Msa0134400:CDS | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | - | chr1_3:65912145-65912164 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | + | chr1_3:65912144-65912163 | Msa0134400:CDS | 35.0% |
| GAATGGAAGAATAGCTATGT+TGG | + | chr1_3:65912210-65912229 | Msa0134400:CDS | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | + | chr1_3:65912225-65912244 | Msa0134400:CDS | 35.0% | |
| ! | GGCTTTTACAGAGTATGTTA+AGG | + | chr1_3:65912246-65912265 | Msa0134400:CDS | 35.0% |
| !! | ATTGAGCACCATTTCTAGCA+GGG | + | chr1_3:65911456-65911475 | Msa0134400:CDS | 40.0% |
| TAGCTTGAAAGTTCGATCCA+TGG | + | chr1_3:65911540-65911559 | Msa0134400:CDS | 40.0% | |
| ATCCATGGCTGAGGTAAATA+AGG | + | chr1_3:65911555-65911574 | Msa0134400:intron | 40.0% | |
| ! | AACCTTATTTACCTCAGCCA+TGG | - | chr1_3:65911560-65911579 | None:intergenic | 40.0% |
| ! | GGTGATGATGAAGGTGTAAT+CGG | - | chr1_3:65911647-65911666 | None:intergenic | 40.0% |
| !! | GGTGATGATGATGGTGTAAT+TGG | - | chr1_3:65911755-65911774 | None:intergenic | 40.0% |
| ! | GCAGATGAGCACAAAGTTTT+CGG | + | chr1_3:65911937-65911956 | Msa0134400:intron | 40.0% |
| CACCTGAGAGAATTAATGGA+AGG | + | chr1_3:65911984-65912003 | Msa0134400:CDS | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | + | chr1_3:65911998-65912017 | Msa0134400:CDS | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCAA+TGG | + | chr1_3:65912015-65912034 | Msa0134400:CDS | 40.0% |
| !!! | TTGGTTTTGTAGCTGCAATG+GGG | + | chr1_3:65912017-65912036 | Msa0134400:CDS | 40.0% |
| GTGGAAATAGCAAATGGACA+GGG | + | chr1_3:65912040-65912059 | Msa0134400:CDS | 40.0% | |
| AGTGTGGAGTCTAAGTCAAA+AGG | + | chr1_3:65912160-65912179 | Msa0134400:CDS | 40.0% | |
| ATTCCATAACTCAGCATCTG+AGG | - | chr1_3:65912194-65912213 | None:intergenic | 40.0% | |
| TCAGATGCTGAGTTATGGAA+TGG | + | chr1_3:65912193-65912212 | Msa0134400:CDS | 40.0% | |
| !! | ATTGAGCACCATTTCTAGCA+GGG | + | chr1_3:65911456-65911475 | Msa0134400:CDS | 40.0% |
| TAGCTTGAAAGTTCGATCCA+TGG | + | chr1_3:65911540-65911559 | Msa0134400:CDS | 40.0% | |
| ATCCATGGCTGAGGTAAATA+AGG | + | chr1_3:65911555-65911574 | Msa0134400:intron | 40.0% | |
| ! | AACCTTATTTACCTCAGCCA+TGG | - | chr1_3:65911560-65911579 | None:intergenic | 40.0% |
| ! | GGTGATGATGAAGGTGTAAT+CGG | - | chr1_3:65911647-65911666 | None:intergenic | 40.0% |
| !! | GGTGATGATGATGGTGTAAT+TGG | - | chr1_3:65911755-65911774 | None:intergenic | 40.0% |
| ! | GCAGATGAGCACAAAGTTTT+CGG | + | chr1_3:65911937-65911956 | Msa0134400:intron | 40.0% |
| CACCTGAGAGAATTAATGGA+AGG | + | chr1_3:65911984-65912003 | Msa0134400:CDS | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | + | chr1_3:65911998-65912017 | Msa0134400:CDS | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCAA+TGG | + | chr1_3:65912015-65912034 | Msa0134400:CDS | 40.0% |
| !!! | TTGGTTTTGTAGCTGCAATG+GGG | + | chr1_3:65912017-65912036 | Msa0134400:CDS | 40.0% |
| GTGGAAATAGCAAATGGACA+GGG | + | chr1_3:65912040-65912059 | Msa0134400:CDS | 40.0% | |
| AGTGTGGAGTCTAAGTCAAA+AGG | + | chr1_3:65912160-65912179 | Msa0134400:CDS | 40.0% | |
| ATTCCATAACTCAGCATCTG+AGG | - | chr1_3:65912194-65912213 | None:intergenic | 40.0% | |
| TCAGATGCTGAGTTATGGAA+TGG | + | chr1_3:65912193-65912212 | Msa0134400:CDS | 40.0% | |
| !! | CATTGAGCACCATTTCTAGC+AGG | + | chr1_3:65911455-65911474 | Msa0134400:CDS | 45.0% |
| AGCTAGGCATGTACACAGAA+GGG | - | chr1_3:65911507-65911526 | None:intergenic | 45.0% | |
| AAGCTAGGCATGTACACAGA+AGG | - | chr1_3:65911508-65911527 | None:intergenic | 45.0% | |
| TGTACATGCCTAGCTTCAGA+AGG | + | chr1_3:65911512-65911531 | Msa0134400:CDS | 45.0% | |
| !! | CTAGCATTCCTTCTGAAGCT+AGG | - | chr1_3:65911523-65911542 | None:intergenic | 45.0% |
| AGAGCAGAAAGAGCAACCAA+AGG | + | chr1_3:65911718-65911737 | Msa0134400:CDS | 45.0% | |
| GATGGTGTAATTGGGTCTAC+AGG | - | chr1_3:65911746-65911765 | None:intergenic | 45.0% | |
| !! | TGTGGTGTTGGTGATGATGA+TGG | - | chr1_3:65911764-65911783 | None:intergenic | 45.0% |
| !! | TCGGATTTGATGGCTTTTGG+TGG | + | chr1_3:65911956-65911975 | Msa0134400:CDS | 45.0% |
| !! | CGGATTTGATGGCTTTTGGT+GGG | + | chr1_3:65911957-65911976 | Msa0134400:CDS | 45.0% |
| CCATTAATTCTCTCAGGTGC+TGG | - | chr1_3:65911983-65912002 | None:intergenic | 45.0% | |
| CCAGCACCTGAGAGAATTAA+TGG | + | chr1_3:65911980-65911999 | Msa0134400:CDS | 45.0% | |
| !!! | TGGTTTTGTAGCTGCAATGG+GGG | + | chr1_3:65912018-65912037 | Msa0134400:CDS | 45.0% |
| ATGGGGGTGGAAATAGCAAA+TGG | + | chr1_3:65912034-65912053 | Msa0134400:CDS | 45.0% | |
| GGTGGAAATAGCAAATGGAC+AGG | + | chr1_3:65912039-65912058 | Msa0134400:CDS | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | - | chr1_3:65912153-65912172 | None:intergenic | 45.0% | |
| TGTCCTCAGATGCTGAGTTA+TGG | + | chr1_3:65912188-65912207 | Msa0134400:CDS | 45.0% | |
| !! | CATTGAGCACCATTTCTAGC+AGG | + | chr1_3:65911455-65911474 | Msa0134400:CDS | 45.0% |
| AGCTAGGCATGTACACAGAA+GGG | - | chr1_3:65911507-65911526 | None:intergenic | 45.0% | |
| AAGCTAGGCATGTACACAGA+AGG | - | chr1_3:65911508-65911527 | None:intergenic | 45.0% | |
| TGTACATGCCTAGCTTCAGA+AGG | + | chr1_3:65911512-65911531 | Msa0134400:CDS | 45.0% | |
| !! | CTAGCATTCCTTCTGAAGCT+AGG | - | chr1_3:65911523-65911542 | None:intergenic | 45.0% |
| AGAGCAGAAAGAGCAACCAA+AGG | + | chr1_3:65911718-65911737 | Msa0134400:CDS | 45.0% | |
| GATGGTGTAATTGGGTCTAC+AGG | - | chr1_3:65911746-65911765 | None:intergenic | 45.0% | |
| !! | TGTGGTGTTGGTGATGATGA+TGG | - | chr1_3:65911764-65911783 | None:intergenic | 45.0% |
| !! | TCGGATTTGATGGCTTTTGG+TGG | + | chr1_3:65911956-65911975 | Msa0134400:CDS | 45.0% |
| !! | CGGATTTGATGGCTTTTGGT+GGG | + | chr1_3:65911957-65911976 | Msa0134400:CDS | 45.0% |
| CCATTAATTCTCTCAGGTGC+TGG | - | chr1_3:65911983-65912002 | None:intergenic | 45.0% | |
| CCAGCACCTGAGAGAATTAA+TGG | + | chr1_3:65911980-65911999 | Msa0134400:CDS | 45.0% | |
| !!! | TGGTTTTGTAGCTGCAATGG+GGG | + | chr1_3:65912018-65912037 | Msa0134400:CDS | 45.0% |
| ATGGGGGTGGAAATAGCAAA+TGG | + | chr1_3:65912034-65912053 | Msa0134400:CDS | 45.0% | |
| GGTGGAAATAGCAAATGGAC+AGG | + | chr1_3:65912039-65912058 | Msa0134400:CDS | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | - | chr1_3:65912153-65912172 | None:intergenic | 45.0% | |
| TGTCCTCAGATGCTGAGTTA+TGG | + | chr1_3:65912188-65912207 | Msa0134400:CDS | 45.0% | |
| ! | AGCTCTAGCCCTGCTAGAAA+TGG | - | chr1_3:65911467-65911486 | None:intergenic | 50.0% |
| GAAAGTTCGATCCATGGCTG+AGG | + | chr1_3:65911546-65911565 | Msa0134400:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | - | chr1_3:65911737-65911756 | None:intergenic | 50.0% | |
| TACCTTTGGTGAGCGAGTGT+AGG | - | chr1_3:65911792-65911811 | None:intergenic | 50.0% | |
| ! | TTTTGTAGCTGCAATGGGGG+TGG | + | chr1_3:65912021-65912040 | Msa0134400:CDS | 50.0% |
| CACTTGTCCCCAAGAACCAT+GGG | - | chr1_3:65912096-65912115 | None:intergenic | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | - | chr1_3:65912097-65912116 | None:intergenic | 50.0% | |
| ! | AGCTCTAGCCCTGCTAGAAA+TGG | - | chr1_3:65911467-65911486 | None:intergenic | 50.0% |
| GAAAGTTCGATCCATGGCTG+AGG | + | chr1_3:65911546-65911565 | Msa0134400:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | - | chr1_3:65911737-65911756 | None:intergenic | 50.0% | |
| TACCTTTGGTGAGCGAGTGT+AGG | - | chr1_3:65911792-65911811 | None:intergenic | 50.0% | |
| ! | TTTTGTAGCTGCAATGGGGG+TGG | + | chr1_3:65912021-65912040 | Msa0134400:CDS | 50.0% |
| CACTTGTCCCCAAGAACCAT+GGG | - | chr1_3:65912096-65912115 | None:intergenic | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | - | chr1_3:65912097-65912116 | None:intergenic | 50.0% | |
| ! | GTGTAGGCTGGTTGTGGTGT+TGG | - | chr1_3:65911776-65911795 | None:intergenic | 55.0% |
| TTTGGTGAGCGAGTGTAGGC+TGG | - | chr1_3:65911788-65911807 | None:intergenic | 55.0% | |
| AGCCTACACTCGCTCACCAA+AGG | + | chr1_3:65911787-65911806 | Msa0134400:CDS | 55.0% | |
| !! | TATCTGGTGGTGGAGTCCCA+TGG | + | chr1_3:65912077-65912096 | Msa0134400:CDS | 55.0% |
| TGGTGGAGTCCCATGGTTCT+TGG | + | chr1_3:65912084-65912103 | Msa0134400:CDS | 55.0% | |
| GGTGGAGTCCCATGGTTCTT+GGG | + | chr1_3:65912085-65912104 | Msa0134400:CDS | 55.0% | |
| GTGGAGTCCCATGGTTCTTG+GGG | + | chr1_3:65912086-65912105 | Msa0134400:CDS | 55.0% | |
| ! | GTGTAGGCTGGTTGTGGTGT+TGG | - | chr1_3:65911776-65911795 | None:intergenic | 55.0% |
| TTTGGTGAGCGAGTGTAGGC+TGG | - | chr1_3:65911788-65911807 | None:intergenic | 55.0% | |
| AGCCTACACTCGCTCACCAA+AGG | + | chr1_3:65911787-65911806 | Msa0134400:CDS | 55.0% | |
| !! | TATCTGGTGGTGGAGTCCCA+TGG | + | chr1_3:65912077-65912096 | Msa0134400:CDS | 55.0% |
| TGGTGGAGTCCCATGGTTCT+TGG | + | chr1_3:65912084-65912103 | Msa0134400:CDS | 55.0% | |
| GGTGGAGTCCCATGGTTCTT+GGG | + | chr1_3:65912085-65912104 | Msa0134400:CDS | 55.0% | |
| GTGGAGTCCCATGGTTCTTG+GGG | + | chr1_3:65912086-65912105 | Msa0134400:CDS | 55.0% | |
| ! | GAGCGAGTGTAGGCTGGTTG+TGG | - | chr1_3:65911782-65911801 | None:intergenic | 60.0% |
| ! | GAGCGAGTGTAGGCTGGTTG+TGG | - | chr1_3:65911782-65911801 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 65911415 | 65912285 | 65911415 | ID=Msa0134400;Name=Msa0134400 |
| chr1_3 | mRNA | 65911415 | 65912285 | 65911415 | ID=Msa0134400-mRNA-1;Parent=Msa0134400;Name=Msa0134400-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|1|1|3|0|196 |
| chr1_3 | exon | 65911415 | 65911567 | 65911415 | ID=Msa0134400-mRNA-1:exon:22442;Parent=Msa0134400-mRNA-1 |
| chr1_3 | exon | 65911716 | 65911808 | 65911716 | ID=Msa0134400-mRNA-1:exon:22443;Parent=Msa0134400-mRNA-1 |
| chr1_3 | exon | 65911941 | 65912285 | 65911941 | ID=Msa0134400-mRNA-1:exon:22444;Parent=Msa0134400-mRNA-1 |
| chr1_3 | CDS | 65911415 | 65911567 | 65911415 | ID=Msa0134400-mRNA-1:cds;Parent=Msa0134400-mRNA-1 |
| chr1_3 | CDS | 65911716 | 65911808 | 65911716 | ID=Msa0134400-mRNA-1:cds;Parent=Msa0134400-mRNA-1 |
| chr1_3 | CDS | 65911941 | 65912285 | 65911941 | ID=Msa0134400-mRNA-1:cds;Parent=Msa0134400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
