Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065561.t1 | WP_139109277.1 | 100 | 82 | 0 | 0 | 1 | 82 | 59 | 140 | 6.60E-39 | 169.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065561.t1 | Q40519 | 84.1 | 82 | 13 | 0 | 1 | 82 | 55 | 136 | 1.2e-33 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065561.t1 | G7IJ44 | 97.6 | 82 | 2 | 0 | 1 | 82 | 55 | 136 | 1.2e-37 | 164.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene065561 | 0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene065561 | 0.910558 | 1.64E-82 | -1.69E-46 |
| MS.gene049173 | MS.gene065561 | 0.829609 | 4.68E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene065561 | 0.843695 | 1.20E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene065561 | 0.906236 | 1.84E-80 | -1.69E-46 |
| MS.gene049232 | MS.gene065561 | 0.868794 | 5.01E-66 | -1.69E-46 |
| MS.gene049285 | MS.gene065561 | 0.918931 | 8.46E-87 | -1.69E-46 |
| MS.gene049320 | MS.gene065561 | 0.92359 | 2.17E-89 | -1.69E-46 |
| MS.gene049609 | MS.gene065561 | 0.895401 | 9.93E-76 | -1.69E-46 |
| MS.gene049627 | MS.gene065561 | 0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene065561 | 0.890447 | 9.77E-74 | -1.69E-46 |
| MS.gene049805 | MS.gene065561 | 0.847157 | 1.38E-59 | -1.69E-46 |
| MS.gene049865 | MS.gene065561 | 0.80934 | 1.99E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene065561 | 0.890376 | 1.04E-73 | -1.69E-46 |
| MS.gene050163 | MS.gene065561 | 0.881714 | 1.91E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene065561 | 0.879979 | 8.01E-70 | -1.69E-46 |
| MS.gene050170 | MS.gene065561 | 0.883014 | 6.42E-71 | -1.69E-46 |
| MS.gene050216 | MS.gene065561 | 0.819811 | 9.55E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene065561 | 0.878186 | 3.44E-69 | -1.69E-46 |
| MS.gene050333 | MS.gene065561 | 0.872917 | 2.20E-67 | -1.69E-46 |
| MS.gene050381 | MS.gene065561 | -0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene065561 | 0.82458 | 7.47E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene065561 | 0.87413 | 8.59E-68 | -1.69E-46 |
| MS.gene050502 | MS.gene065561 | 0.806438 | 8.22E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene065561 | 0.909821 | 3.73E-82 | -1.69E-46 |
| MS.gene050518 | MS.gene065561 | 0.890553 | 8.88E-74 | -1.69E-46 |
| MS.gene050538 | MS.gene065561 | 0.870822 | 1.09E-66 | -1.69E-46 |
| MS.gene050577 | MS.gene065561 | 0.886648 | 2.85E-72 | -1.69E-46 |
| MS.gene050593 | MS.gene065561 | 0.851907 | 6.54E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene065561 | 0.909786 | 3.87E-82 | -1.69E-46 |
| MS.gene050647 | MS.gene065561 | -0.812988 | 3.21E-51 | -1.69E-46 |
| MS.gene050662 | MS.gene065561 | 0.809941 | 1.48E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene065561 | 0.879705 | 1.00E-69 | -1.69E-46 |
| MS.gene050699 | MS.gene065561 | 0.890742 | 7.48E-74 | -1.69E-46 |
| MS.gene050747 | MS.gene065561 | 0.900674 | 5.78E-78 | -1.69E-46 |
| MS.gene050772 | MS.gene065561 | 0.917116 | 7.85E-86 | -1.69E-46 |
| MS.gene05080 | MS.gene065561 | 0.894849 | 1.67E-75 | -1.69E-46 |
| MS.gene05081 | MS.gene065561 | 0.841924 | 3.54E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene065561 | 0.891837 | 2.76E-74 | -1.69E-46 |
| MS.gene050871 | MS.gene065561 | 0.889345 | 2.63E-73 | -1.69E-46 |
| MS.gene050876 | MS.gene065561 | 0.822063 | 2.89E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene065561 | 0.85804 | 1.08E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene065561 | 0.906974 | 8.35E-81 | -1.69E-46 |
| MS.gene050986 | MS.gene065561 | 0.897353 | 1.53E-76 | -1.69E-46 |
| MS.gene05100 | MS.gene065561 | 0.853337 | 2.55E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene065561 | -0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene065561 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene065561 | -0.827448 | 1.56E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene065561 | -0.821279 | 4.39E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene065561 | 0.827721 | 1.34E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene065561 | 0.835751 | 1.40E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene065561 | 0.873805 | 1.11E-67 | -1.69E-46 |
| MS.gene051387 | MS.gene065561 | 0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene065561 | 0.877755 | 4.87E-69 | -1.69E-46 |
| MS.gene051617 | MS.gene065561 | 0.826255 | 3.00E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene065561 | -0.839531 | 1.50E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene065561 | 0.822367 | 2.46E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene065561 | 0.823307 | 1.49E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene065561 | 0.883873 | 3.10E-71 | -1.69E-46 |
| MS.gene051838 | MS.gene065561 | 0.851482 | 8.62E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene065561 | 0.837562 | 4.83E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene065561 | 0.822935 | 1.82E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene065561 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene065561 | 0.860555 | 1.90E-63 | -1.69E-46 |
| MS.gene052271 | MS.gene065561 | 0.831432 | 1.67E-55 | -1.69E-46 |
| MS.gene052379 | MS.gene065561 | 0.829949 | 3.87E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene065561 | 0.816864 | 4.44E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene065561 | 0.875722 | 2.46E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene065561 | 0.874264 | 7.74E-68 | -1.69E-46 |
| MS.gene052501 | MS.gene065561 | 0.817317 | 3.51E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene065561 | 0.862309 | 5.55E-64 | -1.69E-46 |
| MS.gene052504 | MS.gene065561 | 0.8042 | 2.42E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene065561 | 0.81774 | 2.82E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene065561 | 0.837434 | 5.21E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene065561 | 0.86959 | 2.76E-66 | -1.69E-46 |
| MS.gene052822 | MS.gene065561 | 0.853832 | 1.84E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene065561 | 0.860233 | 2.38E-63 | -1.69E-46 |
| MS.gene052825 | MS.gene065561 | 0.851772 | 7.14E-61 | -1.69E-46 |
| MS.gene052870 | MS.gene065561 | 0.857425 | 1.65E-62 | -1.69E-46 |
| MS.gene052872 | MS.gene065561 | 0.86577 | 4.64E-65 | -1.69E-46 |
| MS.gene052916 | MS.gene065561 | 0.83723 | 5.87E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene065561 | 0.859567 | 3.78E-63 | -1.69E-46 |
| MS.gene053009 | MS.gene065561 | 0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene065561 | 0.832935 | 7.11E-56 | -1.69E-46 |
| MS.gene053117 | MS.gene065561 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene065561 | 0.885122 | 1.07E-71 | -1.69E-46 |
| MS.gene053207 | MS.gene065561 | 0.84554 | 3.81E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene065561 | 0.906548 | 1.32E-80 | -1.69E-46 |
| MS.gene053286 | MS.gene065561 | 0.904975 | 6.99E-80 | -1.69E-46 |
| MS.gene053322 | MS.gene065561 | 0.825554 | 4.40E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene065561 | -0.83402 | 3.82E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene065561 | 0.863251 | 2.85E-64 | -1.69E-46 |
| MS.gene053479 | MS.gene065561 | 0.88982 | 1.72E-73 | -1.69E-46 |
| MS.gene053480 | MS.gene065561 | 0.848038 | 7.91E-60 | -1.69E-46 |
| MS.gene053561 | MS.gene065561 | -0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene065561 | 0.915465 | 5.70E-85 | -1.69E-46 |
| MS.gene053579 | MS.gene065561 | 0.820667 | 6.08E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene065561 | 0.847552 | 1.08E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene065561 | 0.845412 | 4.13E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene065561 | 0.888559 | 5.30E-73 | -1.69E-46 |
| MS.gene053916 | MS.gene065561 | 0.847934 | 8.44E-60 | -1.69E-46 |
| MS.gene054003 | MS.gene065561 | 0.818375 | 2.03E-52 | -1.69E-46 |
| MS.gene054374 | MS.gene065561 | 0.844166 | 8.94E-59 | -1.69E-46 |
| MS.gene054408 | MS.gene065561 | 0.896146 | 4.88E-76 | -1.69E-46 |
| MS.gene054595 | MS.gene065561 | 0.873701 | 1.20E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene065561 | 0.880297 | 6.16E-70 | -1.69E-46 |
| MS.gene054616 | MS.gene065561 | -0.808448 | 3.08E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene065561 | 0.904735 | 8.99E-80 | -1.69E-46 |
| MS.gene054706 | MS.gene065561 | -0.827092 | 1.89E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene065561 | -0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene054708 | MS.gene065561 | -0.800237 | 1.58E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene065561 | 0.893701 | 4.92E-75 | -1.69E-46 |
| MS.gene054927 | MS.gene065561 | 0.837353 | 5.46E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene065561 | 0.825989 | 3.47E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene065561 | 0.906084 | 2.16E-80 | -1.69E-46 |
| MS.gene05505 | MS.gene065561 | 0.846031 | 2.80E-59 | -1.69E-46 |
| MS.gene055154 | MS.gene065561 | -0.841466 | 4.67E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene065561 | 0.843786 | 1.13E-58 | -1.69E-46 |
| MS.gene055212 | MS.gene065561 | 0.845246 | 4.58E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene065561 | 0.871505 | 6.49E-67 | -1.69E-46 |
| MS.gene055289 | MS.gene065561 | 0.853523 | 2.26E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene065561 | 0.911741 | 4.31E-83 | -1.69E-46 |
| MS.gene055502 | MS.gene065561 | 0.909122 | 8.07E-82 | -1.69E-46 |
| MS.gene055577 | MS.gene065561 | 0.887048 | 2.01E-72 | -1.69E-46 |
| MS.gene055722 | MS.gene065561 | 0.867158 | 1.68E-65 | -1.69E-46 |
| MS.gene055748 | MS.gene065561 | 0.902548 | 8.66E-79 | -1.69E-46 |
| MS.gene055750 | MS.gene065561 | 0.88908 | 3.34E-73 | -1.69E-46 |
| MS.gene055751 | MS.gene065561 | 0.901505 | 2.50E-78 | -1.69E-46 |
| MS.gene055776 | MS.gene065561 | 0.858113 | 1.03E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene065561 | 0.89796 | 8.46E-77 | -1.69E-46 |
| MS.gene05592 | MS.gene065561 | 0.841643 | 4.20E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene065561 | 0.857609 | 1.45E-62 | -1.69E-46 |
| MS.gene055956 | MS.gene065561 | -0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene065561 | 0.842574 | 2.38E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene065561 | 0.80867 | 2.76E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene065561 | 0.838525 | 2.73E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene065561 | 0.840905 | 6.56E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene065561 | 0.856978 | 2.23E-62 | -1.69E-46 |
| MS.gene056387 | MS.gene065561 | 0.811291 | 7.54E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene065561 | 0.805261 | 1.45E-49 | -1.69E-46 |
| MS.gene056446 | MS.gene065561 | 0.881608 | 2.08E-70 | -1.69E-46 |
| MS.gene056448 | MS.gene065561 | 0.806868 | 6.68E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene065561 | 0.806289 | 8.84E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene065561 | 0.90643 | 1.50E-80 | -1.69E-46 |
| MS.gene056510 | MS.gene065561 | 0.894882 | 1.62E-75 | -1.69E-46 |
| MS.gene056549 | MS.gene065561 | 0.803085 | 4.12E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene065561 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene065561 | 0.908068 | 2.56E-81 | -1.69E-46 |
| MS.gene056692 | MS.gene065561 | 0.890568 | 8.76E-74 | -1.69E-46 |
| MS.gene056856 | MS.gene065561 | -0.80941 | 1.92E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene065561 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene065561 | 0.82757 | 1.45E-54 | -1.69E-46 |
| MS.gene056946 | MS.gene065561 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene056947 | MS.gene065561 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene065561 | 0.803444 | 3.48E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene065561 | 0.860307 | 2.26E-63 | -1.69E-46 |
| MS.gene057129 | MS.gene065561 | 0.819186 | 1.33E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene065561 | 0.879741 | 9.73E-70 | -1.69E-46 |
| MS.gene057332 | MS.gene065561 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene065561 | 0.877146 | 7.94E-69 | -1.69E-46 |
| MS.gene057658 | MS.gene065561 | 0.861201 | 1.21E-63 | -1.69E-46 |
| MS.gene057768 | MS.gene065561 | -0.814495 | 1.50E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene065561 | 0.874367 | 7.14E-68 | -1.69E-46 |
| MS.gene05787 | MS.gene065561 | 0.869417 | 3.15E-66 | -1.69E-46 |
| MS.gene058019 | MS.gene065561 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene058130 | MS.gene065561 | 0.887254 | 1.68E-72 | -1.69E-46 |
| MS.gene058157 | MS.gene065561 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene065561 | 0.837511 | 4.98E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene065561 | -0.83334 | 5.64E-56 | -1.69E-46 |
| MS.gene058335 | MS.gene065561 | 0.801522 | 8.66E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene065561 | 0.858987 | 5.65E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene065561 | 0.930236 | 2.20E-93 | -1.69E-46 |
| MS.gene058419 | MS.gene065561 | 0.919045 | 7.34E-87 | -1.69E-46 |
| MS.gene058544 | MS.gene065561 | 0.915631 | 4.68E-85 | -1.69E-46 |
| MS.gene058603 | MS.gene065561 | -0.808 | 3.84E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene065561 | 0.859107 | 5.20E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene065561 | 0.906335 | 1.66E-80 | -1.69E-46 |
| MS.gene058838 | MS.gene065561 | 0.871952 | 4.62E-67 | -1.69E-46 |
| MS.gene05883 | MS.gene065561 | 0.825032 | 5.85E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene065561 | 0.920197 | 1.74E-87 | -1.69E-46 |
| MS.gene059023 | MS.gene065561 | 0.916833 | 1.11E-85 | -1.69E-46 |
| MS.gene059029 | MS.gene065561 | 0.84521 | 4.68E-59 | -1.69E-46 |
| MS.gene059079 | MS.gene065561 | 0.804428 | 2.17E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene065561 | 0.855417 | 6.40E-62 | -1.69E-46 |
| MS.gene05914 | MS.gene065561 | 0.847225 | 1.32E-59 | -1.69E-46 |
| MS.gene059181 | MS.gene065561 | 0.818044 | 2.41E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene065561 | 0.829458 | 5.09E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene065561 | 0.843544 | 1.31E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene065561 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene065561 | 0.812803 | 3.53E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene065561 | 0.890102 | 1.33E-73 | -1.69E-46 |
| MS.gene059677 | MS.gene065561 | 0.91377 | 4.18E-84 | -1.69E-46 |
| MS.gene059718 | MS.gene065561 | 0.89295 | 9.89E-75 | -1.69E-46 |
| MS.gene059756 | MS.gene065561 | 0.857304 | 1.79E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene065561 | 0.823532 | 1.32E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene065561 | 0.843681 | 1.21E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene065561 | 0.910567 | 1.62E-82 | -1.69E-46 |
| MS.gene059902 | MS.gene065561 | 0.835538 | 1.58E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene065561 | 0.811139 | 8.13E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene065561 | 0.863428 | 2.51E-64 | -1.69E-46 |
| MS.gene06027 | MS.gene065561 | 0.804589 | 2.01E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene065561 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene065561 | -0.814896 | 1.22E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene065561 | 0.859125 | 5.14E-63 | -1.69E-46 |
| MS.gene060728 | MS.gene065561 | 0.815331 | 9.77E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene065561 | 0.893463 | 6.14E-75 | -1.69E-46 |
| MS.gene060778 | MS.gene065561 | 0.854689 | 1.04E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene065561 | 0.915338 | 6.63E-85 | -1.69E-46 |
| MS.gene060804 | MS.gene065561 | 0.806461 | 8.13E-50 | -1.69E-46 |
| MS.gene060823 | MS.gene065561 | -0.818953 | 1.50E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene065561 | 0.841411 | 4.83E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene065561 | 0.90519 | 5.58E-80 | -1.69E-46 |
| MS.gene06097 | MS.gene065561 | 0.826488 | 2.64E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene065561 | 0.890825 | 6.94E-74 | -1.69E-46 |
| MS.gene061044 | MS.gene065561 | -0.816196 | 6.26E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene065561 | 0.892552 | 1.43E-74 | -1.69E-46 |
| MS.gene061200 | MS.gene065561 | 0.806387 | 8.43E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065561.t1 | MTR_2g064650 | 97.561 | 82 | 2 | 0 | 1 | 82 | 55 | 136 | 6.94e-53 | 161 |
| MS.gene065561.t1 | MTR_2g064650 | 98.077 | 52 | 1 | 0 | 1 | 52 | 55 | 106 | 2.69e-32 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065561.t1 | AT1G79040 | 79.268 | 82 | 17 | 0 | 1 | 82 | 59 | 140 | 1.69e-40 | 130 |
Find 29 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCGACTGGCTTGGCTATC+TGG | 0.093434 | 2.2:+22268237 | MS.gene065561:CDS |
| CAGTCCTTTGGGTCGTAGAT+AGG | 0.323072 | 2.2:-22267627 | None:intergenic |
| CCGGTTGGAGACCAGTCCTT+TGG | 0.338674 | 2.2:-22267639 | None:intergenic |
| CCAGATGGAAAAGATGCTTC+TGG | 0.381325 | 2.2:+22266286 | MS.gene065561:CDS |
| CGGTTGGAGACCAGTCCTTT+GGG | 0.408090 | 2.2:-22267638 | None:intergenic |
| CACCGTATTTGTCCACAAAC+TGG | 0.410816 | 2.2:-22267187 | None:intergenic |
| TCCGACTGGCTTGGCTATCT+GGG | 0.439109 | 2.2:+22268238 | MS.gene065561:CDS |
| AAAGGGTGTTTACCAGTTTG+TGG | 0.454085 | 2.2:+22267175 | MS.gene065561:CDS |
| GTGCTAATGTTGATGGATAC+AGG | 0.463270 | 2.2:+22267207 | MS.gene065561:CDS |
| AAATACGGTGCTAATGTTGA+TGG | 0.464376 | 2.2:+22267200 | MS.gene065561:CDS |
| TACCAGTTTGTGGACAAATA+CGG | 0.473942 | 2.2:+22267185 | MS.gene065561:CDS |
| TTATTAATTGCAGGTCCGAC+TGG | 0.479017 | 2.2:+22268224 | MS.gene065561:intron |
| ATCTGGGCAGTAACTCTAGC+TGG | 0.496777 | 2.2:+22268254 | MS.gene065561:CDS |
| CCAAAGGACTGGTCTCCAAC+CGG | 0.502102 | 2.2:+22267639 | MS.gene065561:CDS |
| ACTCTAGCTGGTCTTCTAGC+TGG | 0.504630 | 2.2:+22268266 | MS.gene065561:CDS |
| AGTCCTTTGGGTCGTAGATA+GGG | 0.509259 | 2.2:-22267626 | None:intergenic |
| AATTGCAGGTCCGACTGGCT+TGG | 0.514526 | 2.2:+22268229 | MS.gene065561:intron |
| TGCTTCTGGCAGGAAACAAA+AGG | 0.517286 | 2.2:+22266300 | MS.gene065561:CDS |
| ATGGAAAAGATGCTTCTGGC+AGG | 0.542571 | 2.2:+22266290 | MS.gene065561:CDS |
| CTAGCTGGTCTTCTAGCTGG+TGG | 0.579831 | 2.2:+22268269 | MS.gene065561:CDS |
| GGTGGCATGGCCTTGCCAGA+TGG | 0.588864 | 2.2:+22266271 | None:intergenic |
| CTATCTACGACCCAAAGGAC+TGG | 0.590400 | 2.2:+22267628 | MS.gene065561:CDS |
| ACCTCCAGTGTAGACATCAC+CGG | 0.624297 | 2.2:-22267658 | None:intergenic |
| CAGCCCTATCTACGACCCAA+AGG | 0.645785 | 2.2:+22267623 | MS.gene065561:intron |
| CCAACCGGTGATGTCTACAC+TGG | 0.647391 | 2.2:+22267654 | MS.gene065561:CDS |
| AAGCACTTGTGTTGTAGACA+AGG | 0.648013 | 2.2:-22268298 | None:intergenic |
| GCCCAGATAGCCAAGCCAGT+CGG | 0.648776 | 2.2:-22268239 | None:intergenic |
| ACCGGTGATGTCTACACTGG+AGG | 0.649993 | 2.2:+22267657 | MS.gene065561:CDS |
| CCAGTGTAGACATCACCGGT+TGG | 0.671824 | 2.2:-22267654 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTTATTTTATTT+TGG | + | chr2.2:22266328-22266347 | MS.gene065561:intron | 0.0% |
| !!! | TAGTTTTAGATTATTTATTT+TGG | + | chr2.2:22266357-22266376 | MS.gene065561:intron | 10.0% |
| !!! | AAATTACATTTTGAATAAGT+AGG | - | chr2.2:22267588-22267607 | None:intergenic | 15.0% |
| !!! | AACTTAATAAACTTTTTTTG+AGG | + | chr2.2:22266426-22266445 | MS.gene065561:intron | 15.0% |
| !!! | CAATTTTTTTTTGTATAAAG+TGG | + | chr2.2:22267976-22267995 | MS.gene065561:intron | 15.0% |
| !!! | CTTAATTTCAATTTTATTCA+GGG | + | chr2.2:22267152-22267171 | MS.gene065561:intron | 15.0% |
| !!! | TAACAAATTTTATTAATTGC+AGG | + | chr2.2:22268215-22268234 | MS.gene065561:intron | 15.0% |
| !!! | TCTTAATTTCAATTTTATTC+AGG | + | chr2.2:22267151-22267170 | MS.gene065561:intron | 15.0% |
| !!! | TTTTAGATTATTTATTTTGG+TGG | + | chr2.2:22266360-22266379 | MS.gene065561:intron | 15.0% |
| !! | AATAATAGATAACTATGTTC+TGG | - | chr2.2:22267059-22267078 | None:intergenic | 20.0% |
| !! | ACATGTTTAATAACATAGTT+AGG | + | chr2.2:22267274-22267293 | MS.gene065561:intron | 20.0% |
| !! | ATTAAACATGTAAACAAAAC+TGG | - | chr2.2:22267265-22267284 | None:intergenic | 20.0% |
| !! | ATTATCAAGATTTATTTCCA+TGG | + | chr2.2:22266532-22266551 | MS.gene065561:intron | 20.0% |
| !! | GATCTAATGAAATACATTAA+AGG | + | chr2.2:22266955-22266974 | MS.gene065561:intron | 20.0% |
| !! | TGAAATAATTATGTCATTAG+AGG | + | chr2.2:22267297-22267316 | MS.gene065561:intron | 20.0% |
| !! | TTATCAAGATTTATTTCCAT+GGG | + | chr2.2:22266533-22266552 | MS.gene065561:intron | 20.0% |
| !!! | ATTTATTCAACTTTTAGCTT+TGG | + | chr2.2:22266600-22266619 | MS.gene065561:intron | 20.0% |
| !!! | ATTTTTTTGTTTTAATCCTC+TGG | - | chr2.2:22266563-22266582 | None:intergenic | 20.0% |
| !!! | TAAAGCAATGTTTTAAAAAC+TGG | + | chr2.2:22267769-22267788 | MS.gene065561:intron | 20.0% |
| !!! | TTTCATTTTTTCTGAATTCT+AGG | + | chr2.2:22267238-22267257 | MS.gene065561:intron | 20.0% |
| !!! | TTTTTAAAACATTGCTTTAG+AGG | - | chr2.2:22267768-22267787 | None:intergenic | 20.0% |
| ! | AAAAACAATCATGACATAAG+TGG | + | chr2.2:22267334-22267353 | MS.gene065561:intron | 25.0% |
| ! | ATAAAATAGCATGAACTGTA+GGG | + | chr2.2:22267733-22267752 | MS.gene065561:intron | 25.0% |
| ! | ATGTAGAAAGTGATTCTTAA+GGG | + | chr2.2:22266772-22266791 | MS.gene065561:intron | 25.0% |
| ! | GATAACTAAAATCTGACTTA+TGG | - | chr2.2:22266495-22266514 | None:intergenic | 25.0% |
| ! | TAGGTCAAAGTCTATATAAT+TGG | - | chr2.2:22267569-22267588 | None:intergenic | 25.0% |
| ! | TATGTAGAAAGTGATTCTTA+AGG | + | chr2.2:22266771-22266790 | MS.gene065561:intron | 25.0% |
| !! | GGAATTTTATGTAGTAACAT+AGG | + | chr2.2:22266381-22266400 | MS.gene065561:intron | 25.0% |
| !! | TTCAATTTTATTCAGGGAAA+GGG | + | chr2.2:22267158-22267177 | MS.gene065561:intron | 25.0% |
| !! | TTTCAATTTTATTCAGGGAA+AGG | + | chr2.2:22267157-22267176 | MS.gene065561:intron | 25.0% |
| !! | TTTGTTATCATACTATTGCT+AGG | - | chr2.2:22268202-22268221 | None:intergenic | 25.0% |
| !!! | AAGTAAGGTGGATTTTATAT+AGG | + | chr2.2:22266933-22266952 | MS.gene065561:intron | 25.0% |
| !!! | AGGTAAGAAACTTCTTTTTT+TGG | + | chr2.2:22267677-22267696 | MS.gene065561:intron | 25.0% |
| !!! | GGTAAGAAACTTCTTTTTTT+GGG | + | chr2.2:22267678-22267697 | MS.gene065561:intron | 25.0% |
| AAATCTTTGTATAGCCAACA+CGG | - | chr2.2:22268142-22268161 | None:intergenic | 30.0% | |
| AACATCAAGTCATCAACAAT+AGG | - | chr2.2:22267898-22267917 | None:intergenic | 30.0% | |
| AACCACATATGCTAATTGAA+AGG | + | chr2.2:22266728-22266747 | MS.gene065561:intron | 30.0% | |
| ATCCTTTCAATTAGCATATG+TGG | - | chr2.2:22266733-22266752 | None:intergenic | 30.0% | |
| ATGTTTATTTACTTCAGAGG+AGG | + | chr2.2:22267999-22268018 | MS.gene065561:intron | 30.0% | |
| CAGAAAGCCCAAAAATATAA+GGG | - | chr2.2:22267089-22267108 | None:intergenic | 30.0% | |
| GAATAAATAGTAGACCAAAG+AGG | - | chr2.2:22266626-22266645 | None:intergenic | 30.0% | |
| GATAAAATAGCATGAACTGT+AGG | + | chr2.2:22267732-22267751 | MS.gene065561:intron | 30.0% | |
| GCTGGTACATATAAAAAAGT+TGG | + | chr2.2:22267451-22267470 | MS.gene065561:intron | 30.0% | |
| GTTTCTCACAAGATAAAGTA+AGG | + | chr2.2:22266918-22266937 | MS.gene065561:intron | 30.0% | |
| TACCAAGTGTTTCATATAAG+AGG | - | chr2.2:22266662-22266681 | None:intergenic | 30.0% | |
| TCAGAAAGCCCAAAAATATA+AGG | - | chr2.2:22267090-22267109 | None:intergenic | 30.0% | |
| TGGATGTTTATTTACTTCAG+AGG | + | chr2.2:22267996-22268015 | MS.gene065561:intron | 30.0% | |
| TGTTTATTTACTTCAGAGGA+GGG | + | chr2.2:22268000-22268019 | MS.gene065561:intron | 30.0% | |
| ! | TGAGTGTCCCTTATATTTTT+GGG | + | chr2.2:22267079-22267098 | MS.gene065561:intron | 30.0% |
| ! | TTGAGTGTCCCTTATATTTT+TGG | + | chr2.2:22267078-22267097 | MS.gene065561:intron | 30.0% |
| ! | TTGATAATTCGTAGTTCGAT+CGG | - | chr2.2:22266520-22266539 | None:intergenic | 30.0% |
| !! | TAGAGAGTAGTGTTTAGTTT+TGG | + | chr2.2:22268035-22268054 | MS.gene065561:intron | 30.0% |
| AGTGTTTCATATAAGAGGAG+AGG | - | chr2.2:22266657-22266676 | None:intergenic | 35.0% | |
| ATAAGTTCAACTGGTCGAAT+TGG | + | chr2.2:22267801-22267820 | MS.gene065561:intron | 35.0% | |
| ATAGGGCTGCATAATAAAAC+AGG | - | chr2.2:22267612-22267631 | None:intergenic | 35.0% | |
| CAAGACTAATGTCTCATGTT+TGG | + | chr2.2:22267416-22267435 | MS.gene065561:intron | 35.0% | |
| CATATGTGGTTGAGATGTTA+AGG | - | chr2.2:22266719-22266738 | None:intergenic | 35.0% | |
| CTCCTCTTATATGAAACACT+TGG | + | chr2.2:22266657-22266676 | MS.gene065561:intron | 35.0% | |
| GTGTTTCATATAAGAGGAGA+GGG | - | chr2.2:22266656-22266675 | None:intergenic | 35.0% | |
| TAAGTTCAACTGGTCGAATT+GGG | + | chr2.2:22267802-22267821 | MS.gene065561:intron | 35.0% | |
| TACCAGTTTGTGGACAAATA+CGG | + | chr2.2:22267185-22267204 | MS.gene065561:CDS | 35.0% | |
| TATGTAGTAACATAGGCTTG+TGG | + | chr2.2:22266388-22266407 | MS.gene065561:intron | 35.0% | |
| TCTCACAAGATAAAGTAAGG+TGG | + | chr2.2:22266921-22266940 | MS.gene065561:intron | 35.0% | |
| ! | AAATACGGTGCTAATGTTGA+TGG | + | chr2.2:22267200-22267219 | MS.gene065561:CDS | 35.0% |
| ! | CATGAGCGAAGATAGTTTTT+AGG | - | chr2.2:22268066-22268085 | None:intergenic | 35.0% |
| ! | GAAACACTTGGTAGTTTCTA+AGG | + | chr2.2:22266669-22266688 | MS.gene065561:intron | 35.0% |
| !! | CTTGGTAGTTTCTAAGGTAT+TGG | + | chr2.2:22266675-22266694 | MS.gene065561:intron | 35.0% |
| AAGCACTTGTGTTGTAGACA+AGG | - | chr2.2:22268301-22268320 | None:intergenic | 40.0% | |
| AATTGGGAATCGTCTATCAC+TGG | + | chr2.2:22267818-22267837 | MS.gene065561:intron | 40.0% | |
| ATCCAAAACATGAGAGACGT+TGG | - | chr2.2:22267520-22267539 | None:intergenic | 40.0% | |
| ATCGAGCTGATAAGTTCAAC+TGG | + | chr2.2:22267792-22267811 | MS.gene065561:intron | 40.0% | |
| CAACTATTTCAAGACCGTGT+TGG | + | chr2.2:22268125-22268144 | MS.gene065561:intron | 40.0% | |
| GCATGAACTGTAGGGATTTA+TGG | + | chr2.2:22267741-22267760 | MS.gene065561:intron | 40.0% | |
| GTTTGGATTGATACTCTAGC+TGG | + | chr2.2:22267433-22267452 | MS.gene065561:intron | 40.0% | |
| TTATTAATTGCAGGTCCGAC+TGG | + | chr2.2:22268224-22268243 | MS.gene065561:intron | 40.0% | |
| ! | GTGCTAATGTTGATGGATAC+AGG | + | chr2.2:22267207-22267226 | MS.gene065561:CDS | 40.0% |
| !! | AAAGGGTGTTTACCAGTTTG+TGG | + | chr2.2:22267175-22267194 | MS.gene065561:CDS | 40.0% |
| !!! | ACTTTTAGCTTTGGCCTCTT+TGG | + | chr2.2:22266609-22266628 | MS.gene065561:intron | 40.0% |
| AGTCCTTTGGGTCGTAGATA+GGG | - | chr2.2:22267629-22267648 | None:intergenic | 45.0% | |
| ATGGAAAAGATGCTTCTGGC+AGG | + | chr2.2:22266290-22266309 | MS.gene065561:CDS | 45.0% | |
| CACCGTATTTGTCCACAAAC+TGG | - | chr2.2:22267190-22267209 | None:intergenic | 45.0% | |
| CCAGATGGAAAAGATGCTTC+TGG | + | chr2.2:22266286-22266305 | MS.gene065561:CDS | 45.0% | |
| TATTTCCATGGGAACACCAG+AGG | + | chr2.2:22266544-22266563 | MS.gene065561:intron | 45.0% | |
| TGCTTCTGGCAGGAAACAAA+AGG | + | chr2.2:22266300-22266319 | MS.gene065561:CDS | 45.0% | |
| TTAATCCTCTGGTGTTCCCA+TGG | - | chr2.2:22266552-22266571 | None:intergenic | 45.0% | |
| ! | AGCATCTTTTCCATCTGGCA+AGG | - | chr2.2:22266284-22266303 | None:intergenic | 45.0% |
| ! | GACCAACGTCTCTCATGTTT+TGG | + | chr2.2:22267515-22267534 | MS.gene065561:intron | 45.0% |
| ! | GGAATCGTCTATCACTGGTT+CGG | + | chr2.2:22267823-22267842 | MS.gene065561:intron | 45.0% |
| !!! | CCAGAAGCATCTTTTCCATC+TGG | - | chr2.2:22266289-22266308 | None:intergenic | 45.0% |
| ACCTCCAGTGTAGACATCAC+CGG | - | chr2.2:22267661-22267680 | None:intergenic | 50.0% | |
| ATCTGGGCAGTAACTCTAGC+TGG | + | chr2.2:22268254-22268273 | MS.gene065561:CDS | 50.0% | |
| CAGTCCTTTGGGTCGTAGAT+AGG | - | chr2.2:22267630-22267649 | None:intergenic | 50.0% | |
| CTATCTACGACCCAAAGGAC+TGG | + | chr2.2:22267628-22267647 | MS.gene065561:CDS | 50.0% | |
| !! | ACTCTAGCTGGTCTTCTAGC+TGG | + | chr2.2:22268266-22268285 | MS.gene065561:CDS | 50.0% |
| ACCGGTGATGTCTACACTGG+AGG | + | chr2.2:22267657-22267676 | MS.gene065561:CDS | 55.0% | |
| CAGCCCTATCTACGACCCAA+AGG | + | chr2.2:22267623-22267642 | MS.gene065561:intron | 55.0% | |
| CCAACCGGTGATGTCTACAC+TGG | + | chr2.2:22267654-22267673 | MS.gene065561:CDS | 55.0% | |
| CCAGTGTAGACATCACCGGT+TGG | - | chr2.2:22267657-22267676 | None:intergenic | 55.0% | |
| CGGTTGGAGACCAGTCCTTT+GGG | - | chr2.2:22267641-22267660 | None:intergenic | 55.0% | |
| ! | AATTGCAGGTCCGACTGGCT+TGG | + | chr2.2:22268229-22268248 | MS.gene065561:intron | 55.0% |
| !! | CCAAAGGACTGGTCTCCAAC+CGG | + | chr2.2:22267639-22267658 | MS.gene065561:CDS | 55.0% |
| !! | CTAGCTGGTCTTCTAGCTGG+TGG | + | chr2.2:22268269-22268288 | MS.gene065561:CDS | 55.0% |
| !! | TCCGACTGGCTTGGCTATCT+GGG | + | chr2.2:22268238-22268257 | MS.gene065561:CDS | 55.0% |
| CCGGTTGGAGACCAGTCCTT+TGG | - | chr2.2:22267642-22267661 | None:intergenic | 60.0% | |
| GCCCAGATAGCCAAGCCAGT+CGG | - | chr2.2:22268242-22268261 | None:intergenic | 60.0% | |
| !! | GTCCGACTGGCTTGGCTATC+TGG | + | chr2.2:22268237-22268256 | MS.gene065561:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 22266277 | 22268331 | 22266277 | ID=MS.gene065561 |
| chr2.2 | mRNA | 22266277 | 22268331 | 22266277 | ID=MS.gene065561.t1;Parent=MS.gene065561 |
| chr2.2 | exon | 22266277 | 22266321 | 22266277 | ID=MS.gene065561.t1.exon1;Parent=MS.gene065561.t1 |
| chr2.2 | CDS | 22266277 | 22266321 | 22266277 | ID=cds.MS.gene065561.t1;Parent=MS.gene065561.t1 |
| chr2.2 | exon | 22267173 | 22267228 | 22267173 | ID=MS.gene065561.t1.exon2;Parent=MS.gene065561.t1 |
| chr2.2 | CDS | 22267173 | 22267228 | 22267173 | ID=cds.MS.gene065561.t1;Parent=MS.gene065561.t1 |
| chr2.2 | exon | 22267626 | 22267678 | 22267626 | ID=MS.gene065561.t1.exon3;Parent=MS.gene065561.t1 |
| chr2.2 | CDS | 22267626 | 22267678 | 22267626 | ID=cds.MS.gene065561.t1;Parent=MS.gene065561.t1 |
| chr2.2 | exon | 22268237 | 22268331 | 22268237 | ID=MS.gene065561.t1.exon4;Parent=MS.gene065561.t1 |
| chr2.2 | CDS | 22268237 | 22268331 | 22268237 | ID=cds.MS.gene065561.t1;Parent=MS.gene065561.t1 |
| Gene Sequence |
| Protein sequence |
