AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143940 MtrunA17_Chr1g0160011 88.172 372 23 2 260 610 11 382 0.0 658
Msa0143940 MtrunA17_Chr1g0160011 75.850 294 31 2 4 257 89 382 1.58e-148 434
Msa0143940 MtrunA17_Chr1g0160031 81.283 374 50 1 260 613 11 384 0.0 622
Msa0143940 MtrunA17_Chr1g0160031 71.717 297 44 2 4 260 88 384 8.75e-142 417
Msa0143940 MtrunA17_Chr1g0159991 78.836 378 58 2 258 613 6 383 0.0 598
Msa0143940 MtrunA17_Chr1g0159991 80.936 299 15 2 4 260 85 383 3.78e-162 469
Msa0143940 MtrunA17_Chr1g0159981 73.657 391 75 3 251 613 3 393 0.0 568
Msa0143940 MtrunA17_Chr1g0159981 76.923 299 27 2 4 260 95 393 6.63e-157 456
Msa0143940 MtrunA17_Chr1g0159971 63.243 370 112 3 267 612 24 393 3.08e-167 482
Msa0143940 MtrunA17_Chr1g0159971 62.081 298 71 2 4 259 96 393 1.15e-124 374
Msa0143940 MtrunA17_Chr1g0160101 56.878 378 138 4 259 612 13 389 2.75e-145 426
Msa0143940 MtrunA17_Chr1g0160101 55.853 299 87 4 5 259 92 389 4.95e-103 317
Msa0143940 MtrunA17_Chr7g0254461 52.800 375 151 5 264 612 19 393 1.91e-134 398
Msa0143940 MtrunA17_Chr7g0254461 49.175 303 108 5 3 259 91 393 5.61e-91 286
Msa0143940 MtrunA17_Chr8g0381581 51.902 368 152 5 264 606 16 383 6.64e-129 384
Msa0143940 MtrunA17_Chr8g0381581 47.797 295 109 4 4 253 89 383 1.78e-86 275
Msa0143940 MtrunA17_Chr7g0226941 46.089 358 166 5 280 612 25 380 1.18e-101 313
Msa0143940 MtrunA17_Chr7g0226941 43.000 300 126 5 4 259 82 380 2.50e-71 234
Msa0143940 MtrunA17_Chr6g0450701 42.659 361 168 8 278 610 29 378 1.64e-86 274
Msa0143940 MtrunA17_Chr6g0450701 38.870 301 129 8 3 257 87 378 1.36e-55 192
Msa0143940 MtrunA17_Chr7g0273101 43.767 361 168 10 277 608 18 372 3.46e-84 268
Msa0143940 MtrunA17_Chr7g0273101 37.838 296 130 9 4 251 79 368 1.60e-47 171
Msa0143940 MtrunA17_Chr7g0226931 39.075 389 188 8 268 610 13 398 8.35e-81 260
Msa0143940 MtrunA17_Chr7g0226931 33.648 318 151 7 3 261 86 402 8.39e-50 177
Msa0143940 MtrunA17_Chr7g0275291 39.211 380 195 8 259 610 4 375 1.57e-80 259
Msa0143940 MtrunA17_Chr7g0275291 34.667 300 144 6 4 257 82 375 3.30e-46 167
Msa0143940 MtrunA17_Chr7g0226911 37.008 381 203 8 264 610 7 384 6.56e-80 257
Msa0143940 MtrunA17_Chr7g0226911 33.993 303 149 7 8 261 88 388 1.03e-48 174
Msa0143940 MtrunA17_Chr6g0450711 40.669 359 174 8 281 611 115 462 1.24e-75 248
Msa0143940 MtrunA17_Chr6g0450711 38.411 302 131 8 3 258 170 462 6.45e-54 191
Msa0143940 MtrunA17_Chr1g0191461 39.084 371 190 10 264 605 7 370 7.10e-74 241
Msa0143940 MtrunA17_Chr1g0191461 36.395 294 134 8 5 251 82 369 1.26e-44 162
Msa0143940 MtrunA17_Chr8g0352901 39.005 382 187 10 262 610 4 372 8.91e-74 241
Msa0143940 MtrunA17_Chr8g0352901 37.705 305 132 8 3 257 76 372 7.24e-52 182
Msa0143940 MtrunA17_Chr6g0450731 39.216 357 173 9 280 611 25 362 1.78e-73 239
Msa0143940 MtrunA17_Chr6g0450731 36.552 290 143 7 3 258 80 362 2.36e-55 191
Msa0143940 MtrunA17_Chr8g0347751 38.889 360 180 7 283 610 31 382 2.92e-73 240
Msa0143940 MtrunA17_Chr8g0347751 32.899 307 144 7 4 257 85 382 9.76e-42 155
Msa0143940 MtrunA17_Chr6g0450721 37.097 372 200 8 262 611 1 360 1.24e-71 234
Msa0143940 MtrunA17_Chr6g0450721 38.062 289 137 7 3 258 81 360 1.57e-55 192
Msa0143940 MtrunA17_Chr7g0271551 36.676 349 177 9 288 611 36 365 2.05e-65 218
Msa0143940 MtrunA17_Chr7g0271551 34.021 291 145 7 4 258 86 365 3.73e-41 153
Msa0143940 MtrunA17_Chr8g0339251 37.059 340 168 10 262 575 4 323 1.63e-54 188
Msa0143940 MtrunA17_Chr8g0339251 39.462 223 106 7 3 211 76 283 5.32e-36 137
Msa0143940 MtrunA17_Chr2g0283481 34.574 376 189 14 268 605 27 383 8.89e-45 164
Msa0143940 MtrunA17_Chr2g0283481 29.537 281 146 12 4 241 101 372 4.83e-17 83.6
Msa0143940 MtrunA17_Chr2g0283531 33.708 356 181 12 286 604 29 366 5.31e-41 153
Msa0143940 MtrunA17_Chr2g0283531 29.592 294 149 13 4 251 85 366 7.16e-18 85.9
Msa0143940 MtrunA17_Chr3g0104821 32.123 358 185 13 286 604 42 380 1.71e-39 149
Msa0143940 MtrunA17_Chr3g0104821 28.000 300 149 12 4 251 96 380 1.04e-17 85.5
Msa0143940 MtrunA17_Chr2g0283501 31.892 370 195 13 276 606 18 369 1.81e-39 149
Msa0143940 MtrunA17_Chr2g0283501 28.276 290 155 10 4 249 85 365 4.50e-18 86.7
Msa0143940 MtrunA17_Chr2g0317271 31.921 354 176 12 286 604 28 351 2.53e-39 147
Msa0143940 MtrunA17_Chr2g0317271 28.322 286 152 10 4 251 81 351 9.02e-19 88.6
Msa0143940 MtrunA17_Chr2g0317261 31.921 354 176 12 286 604 28 351 3.18e-39 147
Msa0143940 MtrunA17_Chr2g0317261 27.931 290 150 10 3 251 80 351 4.96e-19 89.4
Msa0143940 MtrunA17_Chr0c01g0489581 31.356 354 178 12 286 604 28 351 1.86e-38 145
Msa0143940 MtrunA17_Chr0c01g0489581 27.178 287 156 10 3 251 80 351 2.28e-17 84.3
Msa0143940 MtrunA17_Chr0c01g0489571 31.356 354 178 12 286 604 28 351 2.11e-38 145
Msa0143940 MtrunA17_Chr0c01g0489571 27.178 287 156 10 3 251 80 351 2.16e-17 84.3
Msa0143940 MtrunA17_Chr2g0283511 30.460 348 193 10 293 605 36 369 3.86e-36 139
Msa0143940 MtrunA17_Chr2g0283511 26.592 267 147 8 25 251 111 368 2.43e-17 84.3
Msa0143940 MtrunA17_Chr3g0112821 32.865 356 179 14 286 605 28 359 1.06e-35 137
Msa0143940 MtrunA17_Chr3g0112821 26.552 290 158 12 4 251 82 358 1.36e-12 69.7
Msa0143940 MtrunA17_Chr4g0057991 28.647 377 211 10 266 606 17 371 2.25e-35 137
Msa0143940 MtrunA17_Chr4g0057991 28.188 298 164 10 3 261 93 379 1.26e-19 91.3
Msa0143940 MtrunA17_Chr2g0301581 31.129 363 206 13 267 604 10 353 8.50e-35 135
Msa0143940 MtrunA17_Chr2g0301581 30.000 290 141 12 4 251 84 353 4.29e-16 80.5
Msa0143940 MtrunA17_Chr3g0093031 32.133 361 180 14 286 605 28 364 8.44e-34 132
Msa0143940 MtrunA17_Chr3g0096551 31.707 369 181 14 286 604 27 374 1.49e-33 132
Msa0143940 MtrunA17_Chr2g0301541 30.854 363 207 13 267 604 10 353 1.69e-33 131
Msa0143940 MtrunA17_Chr2g0301541 29.310 290 143 12 4 251 84 353 3.33e-15 77.8
Msa0143940 MtrunA17_Chr3g0112691 30.682 352 193 10 286 604 28 361 1.11e-32 129
Msa0143940 MtrunA17_Chr8g0344941 30.245 367 190 14 265 594 18 355 6.54e-30 121
Msa0143940 MtrunA17_Chr2g0330781 31.138 334 186 14 287 594 30 345 2.26e-29 119
Msa0143940 MtrunA17_Chr2g0330781 26.690 281 151 10 4 247 89 351 3.41e-16 80.5
Msa0143940 MtrunA17_Chr8g0349321 30.060 336 186 10 288 597 37 349 3.16e-29 119
Msa0143940 MtrunA17_Chr8g0341001 30.120 332 192 13 287 594 31 346 3.48e-27 113
Msa0143940 MtrunA17_Chr8g0341001 27.206 272 147 10 5 241 91 346 7.76e-16 79.3
Msa0143940 MtrunA17_Chr4g0027521 31.065 338 193 14 287 599 26 348 3.50e-27 113
Msa0143940 MtrunA17_Chr4g0027521 26.978 278 152 10 5 246 86 348 3.62e-14 74.3
Msa0143940 MtrunA17_Chr8g0349341 28.358 335 193 10 288 597 37 349 3.86e-27 113
Msa0143940 MtrunA17_Chr5g0438631 29.429 350 203 15 268 590 6 338 1.69e-26 111
Msa0143940 MtrunA17_Chr2g0301591 31.338 284 157 8 267 536 10 269 5.08e-26 108
Msa0143940 MtrunA17_Chr5g0396511 31.287 342 174 15 290 597 48 362 5.30e-26 110
Msa0143940 MtrunA17_Chr7g0274991 31.232 349 171 16 288 598 33 350 1.38e-25 108
Msa0143940 MtrunA17_Chr5g0432101 27.401 354 210 15 267 590 8 344 6.45e-25 106
Msa0143940 MtrunA17_Chr5g0432101 26.667 285 155 11 9 257 96 362 3.97e-14 74.3
Msa0143940 MtrunA17_Chr5g0438621 27.841 352 202 15 264 589 13 338 7.99e-25 106
Msa0143940 MtrunA17_Chr7g0275011 30.460 348 173 14 288 597 34 350 8.84e-25 106
Msa0143940 MtrunA17_Chr2g0294311 28.173 394 205 17 251 601 3 361 9.10e-25 106
Msa0143940 MtrunA17_Chr4g0068441 28.198 383 214 14 251 601 3 356 1.28e-24 105
Msa0143940 MtrunA17_Chr8g0374101 28.134 359 193 15 278 597 28 360 2.96e-24 105
Msa0143940 MtrunA17_Chr8g0374101 23.188 276 157 9 5 241 98 357 2.04e-11 66.2
Msa0143940 MtrunA17_Chr2g0294301 28.324 346 192 13 288 601 35 356 4.23e-24 104
Msa0143940 MtrunA17_Chr1g0156911 28.691 359 208 14 263 590 4 345 5.00e-24 103
Msa0143940 MtrunA17_Chr1g0182811 31.016 374 187 16 262 597 11 351 8.25e-24 103
Msa0143940 MtrunA17_Chr6g0457921 29.024 379 200 18 264 602 4 353 9.11e-24 103
Msa0143940 MtrunA17_Chr2g0301641 29.730 333 179 15 288 588 43 352 1.14e-23 103
Msa0143940 MtrunA17_Chr7g0275001 30.086 349 176 15 288 598 25 343 1.64e-23 102
Msa0143940 MtrunA17_Chr8g0371481 26.781 351 189 16 282 594 35 355 1.08e-22 100
Msa0143940 MtrunA17_Chr8g0371481 26.667 270 143 10 9 241 104 355 4.81e-11 64.7
Msa0143940 MtrunA17_Chr1g0156891 28.889 360 214 14 267 601 21 363 1.32e-22 100
Msa0143940 MtrunA17_Chr1g0156891 25.279 269 150 8 1 235 99 350 5.85e-13 70.9
Msa0143940 MtrunA17_Chr3g0120861 27.988 343 206 16 281 599 31 356 1.41e-22 99.8
Msa0143940 MtrunA17_Chr5g0438641 28.650 363 195 17 264 590 7 341 2.44e-22 99.0
Msa0143940 MtrunA17_Chr2g0320671 28.402 338 189 13 287 594 29 343 2.62e-22 99.0
Msa0143940 MtrunA17_Chr2g0320671 24.521 261 149 7 15 241 97 343 1.00e-11 67.0
Msa0143940 MtrunA17_Chr1g0189891 28.863 343 182 15 288 598 29 341 2.95e-22 99.0
Msa0143940 MtrunA17_Chr8g0380041 24.409 381 234 11 258 609 3 358 4.62e-22 98.2
Msa0143940 MtrunA17_Chr4g0008851 27.249 378 205 16 259 597 4 350 9.40e-22 97.4
Msa0143940 MtrunA17_Chr3g0099151 28.940 349 182 13 287 597 86 406 1.21e-21 97.8
Msa0143940 MtrunA17_Chr3g0086641 27.049 366 204 14 259 590 10 346 1.28e-21 97.1
Msa0143940 MtrunA17_Chr8g0349301 29.630 297 163 11 288 558 37 313 1.29e-21 96.3
Msa0143940 MtrunA17_Chr1g0156921 28.125 352 202 16 267 588 19 349 1.81e-21 96.7
Msa0143940 MtrunA17_Chr3g0131321 25.269 372 218 11 265 603 11 355 1.90e-21 96.7
Msa0143940 MtrunA17_Chr8g0344931 29.586 338 181 9 288 597 37 345 1.97e-21 96.3
Msa0143940 MtrunA17_Chr8g0349331 27.195 353 176 11 267 590 10 310 2.56e-21 95.5
Msa0143940 MtrunA17_Chr7g0275021 26.513 347 190 13 288 598 34 351 5.81e-21 95.1
Msa0143940 MtrunA17_Chr1g0156901 27.190 331 197 14 283 588 45 356 6.22e-21 95.1
Msa0143940 MtrunA17_Chr1g0156901 24.436 266 138 9 10 235 114 356 8.45e-11 64.3
Msa0143940 MtrunA17_Chr2g0285061 24.931 361 212 12 262 590 8 341 1.26e-20 94.0
Msa0143940 MtrunA17_Chr2g0285061 26.132 287 155 11 10 255 91 361 6.27e-11 64.7
Msa0143940 MtrunA17_Chr1g0156931 26.822 343 194 13 283 594 36 352 1.70e-20 93.6
Msa0143940 MtrunA17_Chr1g0156931 27.341 267 140 10 10 241 105 352 3.54e-12 68.2
Msa0143940 MtrunA17_Chr3g0142921 26.844 339 185 13 283 586 31 341 3.25e-20 92.8
Msa0143940 MtrunA17_Chr3g0142921 25.279 269 146 9 1 233 92 341 1.08e-11 67.0
Msa0143940 MtrunA17_Chr3g0105401 28.875 329 192 14 287 590 27 338 3.43e-20 92.4
Msa0143940 MtrunA17_Chr4g0046151 28.763 372 203 20 267 597 16 366 4.46e-20 92.4
Msa0143940 MtrunA17_Chr3g0077571 26.453 344 189 12 280 590 22 334 6.67e-20 91.7
Msa0143940 MtrunA17_Chr5g0420811 28.614 339 206 12 267 589 12 330 9.55e-20 91.3
Msa0143940 MtrunA17_Chr3g0104831 26.644 289 161 10 349 604 29 299 2.14e-19 89.4
Msa0143940 MtrunA17_Chr3g0104831 27.622 286 142 11 16 251 29 299 1.02e-15 78.6
Msa0143940 MtrunA17_Chr2g0301551 28.082 292 170 11 334 604 37 309 2.37e-19 89.4
Msa0143940 MtrunA17_Chr2g0301551 30.000 290 141 12 4 251 40 309 2.95e-16 80.1
Msa0143940 MtrunA17_Chr3g0099231 26.590 346 192 12 287 597 27 345 3.41e-19 90.1
Msa0143940 MtrunA17_Chr3g0085881 27.389 314 200 10 287 589 32 328 4.46e-19 89.4
Msa0143940 MtrunA17_Chr5g0444401 27.350 351 186 17 287 598 27 347 9.32e-19 88.6
Msa0143940 MtrunA17_Chr1g0189901 27.874 348 184 16 288 598 31 348 1.11e-18 88.2
Msa0143940 MtrunA17_Chr2g0284991 25.369 339 227 8 264 589 9 334 1.13e-18 88.6
Msa0143940 MtrunA17_Chr8g0371471 26.000 350 192 16 282 594 35 354 2.30e-18 87.4
Msa0143940 MtrunA17_Chr4g0017431 25.000 380 213 13 267 606 10 357 2.36e-18 87.0
Msa0143940 MtrunA17_Chr2g0284951 25.556 360 211 11 256 589 2 330 7.02e-18 85.9
Msa0143940 MtrunA17_Chr3g0077581 25.538 325 210 11 287 590 35 348 1.19e-17 85.1
Msa0143940 MtrunA17_Chr3g0142941 27.011 348 193 15 272 588 36 353 1.27e-17 85.1
Msa0143940 MtrunA17_Chr2g0301571 27.740 292 171 11 334 604 37 309 1.38e-17 84.3
Msa0143940 MtrunA17_Chr8g0380031 27.044 318 198 11 287 589 83 381 1.41e-17 85.5
Msa0143940 MtrunA17_Chr5g0434621 26.910 301 178 13 320 599 62 341 2.27e-17 84.0
Msa0143940 MtrunA17_Chr3g0085231 25.982 331 200 9 287 597 30 335 3.71e-17 83.6
Msa0143940 MtrunA17_Chr2g0285001 26.480 321 203 14 287 590 32 336 5.00e-17 83.2
Msa0143940 MtrunA17_Chr2g0284921 29.245 212 132 6 287 488 33 236 5.07e-17 83.2
Msa0143940 MtrunA17_Chr5g0405821 27.901 362 215 17 263 592 13 360 1.73e-16 81.6
Msa0143940 MtrunA17_Chr2g0283541 29.464 224 126 7 406 604 76 292 2.92e-16 80.1
Msa0143940 MtrunA17_Chr3g0092131 25.914 301 167 11 323 594 63 336 4.45e-16 80.5
Msa0143940 MtrunA17_Chr3g0104801 40.299 134 70 5 286 411 42 173 5.64e-16 76.3
Msa0143940 MtrunA17_Chr1g0157001 27.303 304 181 13 312 594 63 347 6.43e-16 80.1
Msa0143940 MtrunA17_Chr7g0266061 24.412 340 185 12 289 594 43 344 7.56e-15 76.6
Msa0143940 MtrunA17_Chr8g0370951 25.066 379 215 15 259 597 3 352 2.85e-14 74.7
Msa0143940 MtrunA17_Chr4g0027571 28.037 214 114 5 65 241 3 213 3.10e-14 72.4
Msa0143940 MtrunA17_Chr4g0027571 26.667 225 127 8 396 594 1 213 2.18e-12 67.0
Msa0143940 MtrunA17_Chr5g0437421 24.776 335 219 13 287 600 31 353 2.13e-13 72.0
Msa0143940 MtrunA17_Chr8g0370981 25.000 420 206 16 259 598 14 404 1.08e-12 70.5
Msa0143940 MtrunA17_Chr2g0301561 29.545 220 121 9 334 536 37 239 1.27e-12 68.2
Msa0143940 MtrunA17_Chr1g0178931 22.881 354 206 14 280 601 27 345 2.32e-12 68.9
Msa0143940 MtrunA17_Chr7g0229581 31.469 143 73 3 121 241 7 146 4.20e-12 64.7
Msa0143940 MtrunA17_Chr3g0106911 34.395 157 81 7 313 466 7 144 5.11e-12 65.9
Msa0143940 MtrunA17_Chr2g0284941 26.180 233 154 7 264 487 9 232 8.67e-12 67.0
Msa0143940 MtrunA17_Chr1g0198351 24.551 334 182 12 280 581 35 330 1.54e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143940 AT3G26430.1 48.285 379 171 4 259 612 2 380 1.66e-124 373
Msa0143940 AT3G26430.1 43.854 301 124 4 4 259 80 380 1.15e-80 259
Msa0143940 AT1G67830.1 48.315 356 151 6 283 613 25 372 5.03e-113 343
Msa0143940 AT1G67830.1 42.904 303 120 5 3 260 78 372 5.92e-78 252
Msa0143940 AT5G14450.1 45.968 372 174 5 267 613 20 389 1.64e-107 329
Msa0143940 AT5G14450.1 42.525 301 128 5 4 260 90 389 3.12e-70 232
Msa0143940 AT3G27950.1 43.548 372 175 7 265 610 8 370 2.87e-89 281
Msa0143940 AT3G27950.1 41.060 302 120 8 3 257 80 370 3.11e-58 200
Msa0143940 AT1G54790.3 39.247 372 192 10 265 608 10 375 2.74e-77 251
Msa0143940 AT1G54790.3 37.931 290 128 9 8 250 86 370 7.07e-48 172
Msa0143940 AT4G01130.1 40.267 375 188 9 266 610 12 380 1.34e-75 246
Msa0143940 AT4G01130.1 31.773 299 158 5 4 257 83 380 6.89e-38 145
Msa0143940 AT1G54790.1 37.669 369 197 9 268 608 11 374 1.88e-73 241
Msa0143940 AT1G54790.1 37.931 290 128 9 8 250 85 369 4.42e-48 173
Msa0143940 AT3G05180.1 38.352 352 184 8 285 608 33 379 2.79e-70 232
Msa0143940 AT3G05180.1 34.932 292 139 6 9 254 92 378 2.40e-41 154
Msa0143940 AT1G56670.1 38.032 376 190 9 262 612 16 373 2.05e-69 229
Msa0143940 AT1G56670.1 34.589 292 147 7 4 259 90 373 3.54e-41 154
Msa0143940 AT1G54790.2 35.190 395 197 9 268 608 11 400 2.06e-69 231
Msa0143940 AT1G54790.2 42.857 210 102 8 8 204 85 289 2.92e-37 144
Msa0143940 AT1G09390.1 36.968 376 195 9 261 610 9 368 6.22e-66 220
Msa0143940 AT1G09390.1 34.138 290 147 6 4 257 87 368 6.71e-40 150
Msa0143940 AT4G01130.2 44.203 276 141 7 266 534 12 281 1.40e-62 210
Msa0143940 AT4G01130.2 36.408 206 113 6 4 195 83 284 1.51e-31 125
Msa0143940 AT3G62280.1 38.202 356 157 14 287 607 35 362 2.58e-61 208
Msa0143940 AT3G62280.1 33.793 290 142 10 4 255 86 363 6.46e-34 133
Msa0143940 AT1G56670.2 40.727 275 151 5 262 534 16 280 2.28e-54 187
Msa0143940 AT1G56670.2 37.089 213 116 4 4 206 90 294 4.40e-33 129
Msa0143940 AT1G28600.1 34.896 384 188 14 266 612 14 372 6.31e-48 172
Msa0143940 AT1G28600.1 30.132 302 158 9 8 267 90 380 6.59e-25 107
Msa0143940 AT4G01130.3 36.667 300 154 9 341 610 1 294 6.38e-48 170
Msa0143940 AT4G01130.3 31.864 295 155 5 8 257 1 294 3.10e-38 143
Msa0143940 AT3G62280.2 40.769 260 122 10 287 534 35 274 9.53e-47 167
Msa0143940 AT3G62280.2 36.232 207 108 7 4 198 86 280 3.99e-26 109
Msa0143940 AT1G28590.1 32.095 377 206 9 262 603 10 371 3.47e-44 162
Msa0143940 AT1G28590.1 25.874 286 160 8 8 250 95 371 4.83e-16 80.9
Msa0143940 AT1G31550.1 33.241 361 185 12 285 610 33 372 9.68e-44 161
Msa0143940 AT1G31550.1 27.660 282 156 9 8 250 95 367 5.33e-18 87.0
Msa0143940 AT1G28580.1 31.606 386 208 11 264 610 9 377 2.85e-43 160
Msa0143940 AT1G28580.1 25.784 287 159 8 8 250 96 372 3.94e-17 84.3
Msa0143940 AT1G31550.2 32.967 364 185 12 285 610 33 375 3.76e-43 159
Msa0143940 AT1G31550.2 27.178 287 154 9 8 250 95 370 1.60e-17 85.5
Msa0143940 AT1G28640.1 31.606 386 207 11 264 610 8 375 7.16e-43 159
Msa0143940 AT1G28640.1 26.042 288 155 7 8 249 94 369 3.44e-16 81.3
Msa0143940 AT1G28570.1 31.186 388 209 12 262 610 6 374 1.15e-42 158
Msa0143940 AT1G28570.1 25.260 289 158 10 8 250 93 369 4.28e-15 78.2
Msa0143940 AT1G28670.1 33.420 386 201 13 264 610 8 376 1.93e-42 157
Msa0143940 AT1G28670.1 26.056 284 161 7 8 249 94 370 1.17e-15 79.7
Msa0143940 AT1G28610.2 33.245 376 196 12 264 602 7 364 5.08e-42 156
Msa0143940 AT1G28610.2 26.667 285 156 8 8 249 90 364 1.87e-17 85.1
Msa0143940 AT2G27360.1 32.021 381 203 12 261 603 7 369 1.13e-41 155
Msa0143940 AT1G28660.2 32.041 387 203 14 264 610 8 374 4.33e-41 154
Msa0143940 AT1G28650.1 31.538 390 209 12 262 610 5 377 7.52e-41 153
Msa0143940 AT1G28650.1 26.689 296 143 8 8 249 96 371 1.41e-16 82.4
Msa0143940 AT1G28660.1 32.216 388 202 15 264 610 8 375 3.02e-40 151
Msa0143940 AT5G45910.1 32.199 382 196 15 264 602 8 369 5.79e-39 147
Msa0143940 AT5G45910.1 27.835 291 152 10 8 249 88 369 1.42e-16 82.4
Msa0143940 AT3G48460.1 28.796 382 206 10 265 605 15 371 7.23e-37 142
Msa0143940 AT3G48460.1 25.436 287 162 9 4 249 93 368 1.07e-15 79.7
Msa0143940 AT5G40990.1 29.565 345 190 11 288 600 37 360 1.99e-27 114
Msa0143940 AT3G16370.1 30.793 328 187 14 287 590 29 340 3.59e-27 113
Msa0143940 AT3G16370.1 25.275 273 153 9 10 247 94 350 2.00e-12 69.3
Msa0143940 AT1G28580.2 27.832 309 177 8 331 610 5 296 1.10e-26 111
Msa0143940 AT1G28580.2 25.784 287 159 8 8 250 15 291 1.47e-17 84.3
Msa0143940 AT5G03820.1 27.697 343 187 14 287 594 32 348 1.04e-25 109
Msa0143940 AT5G03820.1 25.275 273 152 9 5 241 92 348 7.41e-14 73.9
Msa0143940 AT4G26790.1 28.324 346 181 16 286 594 27 342 1.10e-25 109
Msa0143940 AT4G26790.2 28.324 346 181 16 286 594 27 342 1.10e-25 109
Msa0143940 AT5G03820.2 26.357 387 221 15 246 594 16 376 1.95e-25 108
Msa0143940 AT5G03820.2 24.910 277 156 9 5 245 120 380 1.51e-13 73.2
Msa0143940 AT4G10950.2 28.530 347 191 14 287 601 70 391 3.91e-25 108
Msa0143940 AT2G42990.1 26.997 363 199 15 266 593 9 340 1.75e-23 102
Msa0143940 AT1G20130.2 28.488 344 190 13 282 590 178 500 1.99e-23 104
Msa0143940 AT1G20130.1 28.488 344 190 13 282 590 198 520 2.63e-23 104
Msa0143940 AT1G71120.1 27.042 355 197 12 275 597 18 342 5.10e-23 101
Msa0143940 AT5G03810.1 25.656 343 193 13 287 594 29 344 6.29e-23 101
Msa0143940 AT5G03810.1 23.913 276 151 9 5 241 89 344 1.53e-12 69.7
Msa0143940 AT5G63170.1 31.541 279 155 11 264 527 4 261 6.87e-23 100
Msa0143940 AT1G53920.1 27.350 351 204 12 264 584 22 351 9.17e-23 101
Msa0143940 AT4G10950.1 28.242 347 188 15 287 601 70 387 1.03e-22 101
Msa0143940 AT3G14225.2 29.480 346 183 11 288 597 37 357 1.08e-22 100
Msa0143940 AT5G22810.1 29.326 341 185 14 287 594 33 350 1.11e-22 100
Msa0143940 AT3G14225.1 30.347 346 184 13 288 597 37 361 1.31e-22 100
Msa0143940 AT5G42170.1 27.778 342 191 13 283 594 45 360 2.60e-22 99.8
Msa0143940 AT1G59406.1 27.195 353 217 12 264 594 6 340 3.10e-22 99.0
Msa0143940 AT1G59030.1 27.195 353 217 12 264 594 6 340 3.10e-22 99.0
Msa0143940 AT1G58725.1 27.195 353 217 12 264 594 6 340 3.10e-22 99.0
Msa0143940 AT5G15720.1 26.471 340 187 11 287 590 29 341 3.67e-22 99.0
Msa0143940 AT5G15720.1 23.162 272 146 8 9 237 90 341 4.72e-12 68.6
Msa0143940 AT3G04290.1 29.947 374 190 17 263 598 7 346 5.26e-22 98.6
Msa0143940 AT1G28600.2 37.379 206 104 8 266 461 14 204 7.20e-22 95.1
Msa0143940 AT2G23540.1 25.562 356 187 14 288 597 48 371 1.74e-21 97.4
Msa0143940 AT2G23540.1 24.648 284 151 13 1 241 105 368 2.99e-12 69.3
Msa0143940 AT1G29670.1 25.496 353 227 12 259 590 2 339 1.98e-21 97.1
Msa0143940 AT1G29670.2 26.087 345 219 12 267 590 78 407 3.93e-21 97.1
Msa0143940 AT1G58520.3 26.946 334 197 11 283 594 25 333 4.52e-21 95.5
Msa0143940 AT1G58525.1 26.946 334 197 11 283 594 25 333 4.52e-21 95.5
Msa0143940 AT4G28780.1 27.954 347 185 15 288 598 31 348 5.30e-21 95.5
Msa0143940 AT1G75900.1 26.911 327 199 13 287 590 42 351 6.32e-21 95.5
Msa0143940 AT1G75900.1 24.723 271 153 9 1 237 98 351 7.52e-11 64.7
Msa0143940 AT1G71691.2 27.811 338 203 14 276 590 41 360 7.55e-21 95.5
Msa0143940 AT3G50400.1 26.404 356 189 16 286 597 32 358 1.00e-20 94.7
Msa0143940 AT3G50400.1 24.727 275 163 12 1 241 91 355 1.86e-13 72.8
Msa0143940 AT4G18970.1 25.077 323 211 8 287 590 27 337 1.03e-20 94.7
Msa0143940 AT5G45670.1 24.857 350 230 9 262 590 1 338 1.04e-20 94.7
Msa0143940 AT4G18970.2 25.077 323 211 8 287 590 27 337 1.08e-20 95.5
Msa0143940 AT5G08460.1 26.301 346 217 10 286 606 47 379 2.04e-20 94.0
Msa0143940 AT3G43550.1 29.304 273 159 10 268 526 10 262 2.41e-20 92.0
Msa0143940 AT1G53940.2 28.406 345 194 12 288 600 39 362 2.48e-20 93.6
Msa0143940 AT5G33370.1 27.429 350 183 15 288 598 30 347 3.41e-20 93.2
Msa0143940 AT3G53100.1 26.703 367 211 16 260 594 2 342 3.42e-20 92.8
Msa0143940 AT1G06990.1 26.331 338 191 14 286 590 35 347 3.52e-20 93.2
Msa0143940 AT2G04570.1 25.272 368 215 14 264 599 7 346 4.10e-20 92.8
Msa0143940 AT1G73610.1 26.866 335 193 11 283 594 30 335 4.57e-20 92.4
Msa0143940 AT2G30310.1 28.228 333 196 14 280 586 26 341 6.64e-20 92.0
Msa0143940 AT1G28610.1 36.058 208 113 7 264 461 7 204 9.31e-20 89.7
Msa0143940 AT1G33811.1 25.070 359 226 11 260 590 5 348 1.59e-19 91.3
Msa0143940 AT1G53990.1 28.161 348 186 14 288 603 35 350 1.95e-19 90.9
Msa0143940 AT1G54020.2 25.215 349 198 12 267 588 12 324 2.77e-19 90.5
Msa0143940 AT1G54030.1 28.276 290 162 10 312 587 80 337 3.66e-19 90.9
Msa0143940 AT1G54030.1 26.104 249 143 8 8 234 108 337 2.65e-11 66.6
Msa0143940 AT5G45950.1 24.926 337 192 14 288 593 40 346 4.38e-19 89.7
Msa0143940 AT2G19060.1 27.164 335 203 13 287 602 29 341 6.56e-19 89.0
Msa0143940 AT1G71691.3 28.044 271 166 10 276 534 41 294 7.87e-19 88.2
Msa0143940 AT1G71250.1 26.400 375 232 12 254 603 4 359 9.32e-19 89.0
Msa0143940 AT2G30220.1 27.660 329 195 15 286 588 31 342 1.30e-18 88.2
Msa0143940 AT2G19010.1 25.697 323 197 10 287 590 29 327 2.15e-18 87.4
Msa0143940 AT2G19010.2 25.697 323 197 10 287 590 59 357 2.97e-18 87.4
Msa0143940 AT2G03980.2 26.748 329 194 15 285 587 40 347 3.90e-18 87.0
Msa0143940 AT2G03980.3 26.748 329 194 15 285 587 40 347 3.90e-18 87.0
Msa0143940 AT2G03980.1 26.748 329 194 15 285 587 40 347 3.90e-18 87.0
Msa0143940 AT2G03980.4 26.748 329 194 15 285 587 40 347 3.90e-18 87.0
Msa0143940 AT1G20120.1 28.090 356 196 15 281 601 71 401 4.62e-18 87.0
Msa0143940 AT2G24560.1 25.982 331 202 13 280 584 26 339 9.02e-18 85.9
Msa0143940 AT1G58430.1 27.134 328 190 14 286 584 33 340 1.23e-17 85.5
Msa0143940 AT5G15720.2 27.376 263 158 8 287 533 29 274 1.44e-17 84.3
Msa0143940 AT1G28570.2 25.974 231 137 6 406 610 80 302 1.78e-17 84.3
Msa0143940 AT1G28570.3 26.316 209 121 5 427 610 11 211 2.83e-17 81.6
Msa0143940 AT1G29660.1 25.000 352 230 11 258 590 4 340 3.11e-17 84.3
Msa0143940 AT5G37690.1 26.536 358 218 13 262 594 1 338 3.74e-17 84.0
Msa0143940 AT2G31540.1 26.074 349 212 14 280 599 27 358 4.31e-17 84.0
Msa0143940 AT2G24560.2 27.407 270 163 10 280 533 26 278 5.66e-17 82.8
Msa0143940 AT1G23500.1 30.116 259 151 10 288 534 35 275 6.68e-17 82.8
Msa0143940 AT1G53940.1 29.893 281 162 9 266 526 7 272 7.51e-17 82.0
Msa0143940 AT1G75930.1 26.374 273 172 9 258 519 2 256 7.86e-17 82.8
Msa0143940 AT1G75920.2 27.701 361 219 16 258 597 2 341 1.43e-16 82.0
Msa0143940 AT2G04020.1 29.004 231 139 8 285 504 40 256 1.55e-16 80.5
Msa0143940 AT2G19050.1 25.449 334 208 9 287 602 30 340 2.08e-16 81.6
Msa0143940 AT1G20135.1 25.648 347 213 11 265 591 6 327 3.39e-16 80.5
Msa0143940 AT4G30140.1 27.273 330 201 10 287 602 32 336 3.73e-16 80.9
Msa0143940 AT2G40250.1 24.159 327 211 13 288 590 36 349 1.13e-15 79.3
Msa0143940 AT2G04020.2 29.907 214 126 7 285 488 40 239 1.14e-15 79.0
Msa0143940 AT1G54030.2 29.412 221 118 7 312 526 80 268 1.39e-15 78.6
Msa0143940 AT1G75880.2 25.698 358 218 14 267 594 26 365 2.34e-15 78.6
Msa0143940 AT2G19050.2 27.237 257 158 7 287 534 30 266 2.83e-15 77.0
Msa0143940 AT5G41890.1 26.571 350 192 16 290 597 33 359 3.02e-15 78.2
Msa0143940 AT5G45960.1 26.984 252 157 9 288 526 47 284 3.43e-15 78.2
Msa0143940 AT1G75880.1 25.824 364 211 16 267 594 26 366 4.14e-15 77.8
Msa0143940 AT5G03980.1 26.842 190 103 4 427 590 127 306 8.72e-15 76.3
Msa0143940 AT5G03980.1 28.022 182 91 6 94 237 127 306 6.68e-14 73.6
Msa0143940 AT4G16230.1 30.682 264 143 13 264 507 4 247 8.99e-15 75.1
Msa0143940 AT1G75890.2 26.000 350 214 14 269 590 25 357 9.99e-15 76.6
Msa0143940 AT1G54000.1 23.077 364 200 13 264 589 12 333 1.03e-14 77.0
Msa0143940 AT1G75890.3 26.000 350 214 14 269 590 54 386 1.11e-14 76.6
Msa0143940 AT5G15720.3 24.510 306 171 10 335 606 48 327 1.50e-14 75.9
Msa0143940 AT5G15720.3 23.162 272 146 8 9 237 59 310 3.39e-12 68.6
Msa0143940 AT1G54010.1 23.120 359 206 11 264 589 12 333 2.06e-14 75.9
Msa0143940 AT1G75890.1 25.414 362 214 16 269 590 25 370 1.66e-13 73.2
Msa0143940 AT1G71691.1 25.993 277 169 12 332 590 1 259 5.46e-13 70.5
Msa0143940 AT5G03600.1 24.324 333 187 14 287 591 13 308 7.32e-13 70.5
Msa0143940 AT5G03600.2 24.324 333 187 14 287 591 48 343 1.03e-12 70.5
Msa0143940 AT5G37690.2 25.419 358 214 14 262 594 1 330 1.91e-12 69.3
Msa0143940 AT1G74460.1 26.644 289 172 12 323 590 63 332 2.94e-12 68.9
Msa0143940 AT3G14220.1 23.615 343 194 15 287 597 31 337 1.82e-11 66.6

Find 134 sgRNAs with CRISPR-Local

Find 824 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTATTGGTGGTTATTT+TGG 0.124216 1_4:+3182008 Msa0143940:CDS
CAATTCTTTGTAGCAAATAT+TGG 0.178924 1_4:-3181145 None:intergenic
TACCCAAAACAAAGTTTATT+AGG 0.181436 1_4:+3175901 Msa0143940:CDS
TGGATGTGTGCCTTTAATTT+TGG 0.224209 1_4:+3176919 Msa0143940:CDS
AACCATCTACTAGAATAATA+TGG 0.227325 1_4:+3177385 Msa0143940:CDS
ATCCCTAATAAACTTTGTTT+TGG 0.232433 1_4:-3175904 None:intergenic
ATTTAGGGGCTAGGTCATTT+TGG 0.232450 1_4:+3182870 Msa0143940:CDS
ACCTATATCAAATGTGTATA+AGG 0.246812 1_4:-3176102 None:intergenic
TGGTTGCACTCCTACGATTT+TGG 0.248180 1_4:+3182913 Msa0143940:CDS
TTTGGAATAATAATCTTCTT+TGG 0.255011 1_4:-3176078 None:intergenic
ATCTCTAATGAGATTTGTTT+TGG 0.255196 1_4:-3181790 None:intergenic
TATGAAATTGTTTACTATAT+CGG 0.256970 1_4:-3182066 None:intergenic
ATCTAGAATATATACAATTT+AGG 0.259358 1_4:+3182854 Msa0143940:intron
AATTAGGGGCCAGGTCATTT+TGG 0.264269 1_4:+3176876 Msa0143940:CDS
TACTGAATCTGAAGGGAAAA+TGG 0.272154 1_4:-3175858 None:intergenic
GGAAAATTGGCCAAAATTAA+AGG 0.273646 1_4:-3176929 None:intergenic
TATGAAATTCTTTACTATAT+CGG 0.274874 1_4:-3176189 None:intergenic
ATCTAGAATATATACAAATT+AGG 0.275565 1_4:+3176860 Msa0143940:intron
ACCAATATCAAATGTGTATA+AGG 0.276105 1_4:-3181979 None:intergenic
AATTCTTTGTAGCAAATATT+GGG 0.277876 1_4:-3181144 None:intergenic
TCTAGAATATATACAAATTA+GGG 0.278589 1_4:+3176861 Msa0143940:intron
CTTTATAGCAGATGGAAAAT+TGG 0.280511 1_4:-3176942 None:intergenic
TCTAGAATATATACAATTTA+GGG 0.282298 1_4:+3182855 Msa0143940:intron
CATGCCATATCTAGAGAAAT+AGG 0.282392 1_4:-3183571 None:intergenic
TACTGAATTTGAAGAGAAAA+TGG 0.283865 1_4:-3181744 None:intergenic
ATCCTCCCATTCCACTAAAT+AGG 0.284287 1_4:+3177478 Msa0143940:CDS
TTGGAATAATAATCTTCTTT+GGG 0.286703 1_4:-3176077 None:intergenic
TCCCATATTATTCTAGTAGA+TGG 0.294746 1_4:-3177387 None:intergenic
CGAATCATTATTGATTTCAT+AGG 0.296923 1_4:+3181301 Msa0143940:CDS
GCCTTATACACATTTGATAT+TGG 0.302387 1_4:+3181978 Msa0143940:CDS
TCCCAAATGATTCTAGTAGA+TGG 0.307386 1_4:-3183475 None:intergenic
CCTAATAGTATTATACCTAA+TGG 0.308302 1_4:+3181711 Msa0143940:CDS
ATTAAGATATGGACTTAGAT+AGG 0.318215 1_4:-3175739 None:intergenic
ATTAAGATATGGACTTAGAT+AGG 0.318215 1_4:-3181625 None:intergenic
ACAAATCTCATTAGAGATAA+AGG 0.323654 1_4:+3181795 Msa0143940:CDS
CCATTAGGTATAATGTTGTT+AGG 0.325094 1_4:-3175825 None:intergenic
GGAGAAATCATAAACATAAA+TGG 0.328429 1_4:+3177333 Msa0143940:CDS
ACCCAAAACAAAGTTTATTA+GGG 0.328879 1_4:+3175902 Msa0143940:CDS
GGAGCAACTATAAACATAAA+TGG 0.333844 1_4:+3183421 Msa0143940:CDS
TAATTTCCCATCTGCAATAA+AGG 0.336425 1_4:+3182937 Msa0143940:CDS
CCATTAGGTATAATACTATT+AGG 0.336828 1_4:-3181711 None:intergenic
ATTGGTCAAAATGATCTTAT+TGG 0.337079 1_4:+3181996 Msa0143940:CDS
AGTCCATATCTTAATTCTCT+TGG 0.339126 1_4:+3175747 Msa0143940:CDS
AGTCCATATCTTAATTCTCT+TGG 0.339126 1_4:+3181633 Msa0143940:CDS
TTGTAACATGCCCTATTTAG+TGG 0.352126 1_4:-3177489 None:intergenic
ACCCATCTACTAGAATCATT+TGG 0.354951 1_4:+3183473 Msa0143940:CDS
GTCTTTGATCAAATCTCTAC+TGG 0.362400 1_4:+3183532 Msa0143940:CDS
ATGAAATTCTTTACTATATC+GGG 0.369299 1_4:-3176188 None:intergenic
TCCTCCCATTCCACTAAATA+GGG 0.373102 1_4:+3177479 Msa0143940:CDS
TCCTCCTATTTCTCTAGATA+TGG 0.373294 1_4:+3183567 Msa0143940:CDS
ATCAAATGTGTATAAGGCTT+TGG 0.374053 1_4:-3176096 None:intergenic
TTTCCTGCCATATTTAGCTT+TGG 0.374076 1_4:+3181172 Msa0143940:CDS
ATGAAATTGTTTACTATATC+GGG 0.374442 1_4:-3182065 None:intergenic
TGAAGCACCAAAGCTAAATA+TGG 0.376452 1_4:-3181179 None:intergenic
CCTAACAACATTATACCTAA+TGG 0.377474 1_4:+3175825 Msa0143940:CDS
CCCATCTACTAGAATCATTT+GGG 0.387794 1_4:+3183474 Msa0143940:CDS
AAACGTTGACACTGGTGGTT+TGG 0.395539 1_4:+3181201 Msa0143940:CDS
GTCCATATCTTAATTCTCTT+GGG 0.407003 1_4:+3181634 Msa0143940:CDS
GACCCAAGAGAATTAAGATA+TGG 0.409299 1_4:-3175750 None:intergenic
ACAAAGTTTATTAGGGATCA+AGG 0.410667 1_4:+3175909 Msa0143940:CDS
GTCCATATCTTAATTCTCTT+GGG 0.414439 1_4:+3175748 Msa0143940:CDS
GTAATTTCAGCACAGAGCTT+TGG 0.415339 1_4:+3181597 Msa0143940:intron
AATGGACTAAATATCCCATT+AGG 0.416788 1_4:-3181726 None:intergenic
CTAATAGTATTATACCTAAT+GGG 0.423195 1_4:+3181712 Msa0143940:CDS
CAAGCACCACCTTCTCCATA+TGG 0.425672 1_4:+3181235 Msa0143940:CDS
ATACACAACACTGGACCAAT+TGG 0.429145 1_4:+3176899 Msa0143940:CDS
AATGGTACAAACATTGTTGT+TGG 0.431505 1_4:+3177351 Msa0143940:CDS
TGAAAATATGTCTCTCCATA+TGG 0.436936 1_4:-3181250 None:intergenic
TAACTATCCTTTATTGCAGA+TGG 0.441895 1_4:-3182944 None:intergenic
ACCATCTACTAGAATAATAT+GGG 0.442115 1_4:+3177386 Msa0143940:CDS
CATGGTGCAAACTTCGCAAC+AGG 0.459101 1_4:+3181669 Msa0143940:CDS
AATGGACTGAACATTCCATT+AGG 0.460673 1_4:-3175840 None:intergenic
GCCTTATACACATTTGATAT+AGG 0.463073 1_4:+3176101 Msa0143940:CDS
GACCCAAGAGAATTAAGATA+TGG 0.468859 1_4:-3181636 None:intergenic
TGGCTATCCTTTATAGCAGA+TGG 0.469012 1_4:-3176950 None:intergenic
CATGCCCTATTTAGTGGAAT+GGG 0.472312 1_4:-3177483 None:intergenic
ATATATACAATTTAGGGGCT+AGG 0.474694 1_4:+3182861 Msa0143940:CDS
GGTCAAAATGATCTTACTGC+TGG 0.478092 1_4:+3176122 Msa0143940:CDS
ATTAAAGGCACACATCCAAT+TGG 0.488389 1_4:-3176914 None:intergenic
ACATGCCCTATTTAGTGGAA+TGG 0.489175 1_4:-3177484 None:intergenic
CCCAAATGATTCTAGTAGAT+GGG 0.491642 1_4:-3183474 None:intergenic
GGTCAAAATGATCTTATTGG+TGG 0.492651 1_4:+3181999 Msa0143940:CDS
ATCAAATGTGTATAAGGCGT+TGG 0.500122 1_4:-3181973 None:intergenic
GATCGCTACGAAGTTGAGCT+AGG 0.500570 1_4:-3183027 None:intergenic
TGTATTGCTTTGCACAACCT+TGG 0.503056 1_4:-3176970 None:intergenic
TTAAGATATGGACTTAGATA+GGG 0.503696 1_4:-3175738 None:intergenic
TTAAGATATGGACTTAGATA+GGG 0.503696 1_4:-3181624 None:intergenic
TGGAGAAGGTGGTGCTTGAA+AGG 0.512450 1_4:-3181230 None:intergenic
GATCCACACGAAGTTGAGCT+AGG 0.516606 1_4:-3177033 None:intergenic
CACGTGGCATGTTGTGGCTA+TGG 0.516845 1_4:+3183370 Msa0143940:CDS
ATATATACAAATTAGGGGCC+AGG 0.517339 1_4:+3176867 Msa0143940:CDS
TACAACATTCATGTTGGATG+TGG 0.534376 1_4:+3183400 Msa0143940:CDS
AACTATCCTTTATTGCAGAT+GGG 0.538312 1_4:-3182943 None:intergenic
TCTGCAATAAAGGATAGTTA+TGG 0.538464 1_4:+3182947 Msa0143940:CDS
ATTCTTTGTAGCAAATATTG+GGG 0.543366 1_4:-3181143 None:intergenic
CTTGGGTCTAACTTCACACA+TGG 0.547798 1_4:+3181651 Msa0143940:CDS
GTTAGCTGTCTCTGTGAAGT+GGG 0.552378 1_4:-3183503 None:intergenic
GGAAAGTACAACATTCATGT+TGG 0.552770 1_4:+3183394 Msa0143940:CDS
ATCGTAGGAGTGCAACCACT+TGG 0.554426 1_4:-3182908 None:intergenic
TGGAATAATAATCTTCTTTG+GGG 0.555591 1_4:-3176076 None:intergenic
ACATATGTGATTGCAGCTAG+TGG 0.560723 1_4:-3177058 None:intergenic
GGTGCAAACTTTGCAACAGC+AGG 0.564350 1_4:+3175786 Msa0143940:CDS
GCACCAAAGCTAAATATGGC+AGG 0.569703 1_4:-3181175 None:intergenic
GGTGCTTCAAACGTTGACAC+TGG 0.571755 1_4:+3181193 Msa0143940:CDS
CTTCCACACGTGGCATGTTG+TGG 0.572010 1_4:+3183364 Msa0143940:CDS
GTCTCTCCATATGGAGAAGG+TGG 0.572633 1_4:-3181241 None:intergenic
TCTACTAGAATCATTTGGGA+TGG 0.589271 1_4:+3183478 Msa0143940:CDS
AGCCCTAGCTCAACTTCGTG+TGG 0.589422 1_4:+3177030 Msa0143940:CDS
ATCGCTACGAAGTTGAGCTA+GGG 0.590736 1_4:-3183026 None:intergenic
TATGTCTCTCCATATGGAGA+AGG 0.594276 1_4:-3181244 None:intergenic
TGTTAGCTGTCTCTGTGAAG+TGG 0.596585 1_4:-3183504 None:intergenic
ACATATGCGATTGCAGCAAG+AGG 0.597236 1_4:-3183052 None:intergenic
GCCCTATTTAGTGGAATGGG+AGG 0.602436 1_4:-3177480 None:intergenic
ATCCACACGAAGTTGAGCTA+GGG 0.606515 1_4:-3177032 None:intergenic
AGGATTTGAGCTTCCACACG+TGG 0.609396 1_4:+3183354 Msa0143940:intron
CAATTTCATAGAGAGTATCA+AGG 0.612160 1_4:+3182079 Msa0143940:CDS
GGGAAATTAGCCAAAATCGT+AGG 0.621519 1_4:-3182923 None:intergenic
AGCACAATCAAAGACACAAG+TGG 0.622514 1_4:-3181103 None:intergenic
ATTGAATGTACTGAATCTGA+AGG 0.624133 1_4:-3175866 None:intergenic
GCTTCAAACGTTGACACTGG+TGG 0.626758 1_4:+3181196 Msa0143940:CDS
TCAACTGGAAGATACTCTGA+TGG 0.630816 1_4:+3181277 Msa0143940:CDS
TAGCCACAACATGCCACGTG+TGG 0.635122 1_4:-3183367 None:intergenic
TCTACTAGAATAATATGGGA+TGG 0.641361 1_4:+3177390 Msa0143940:CDS
TTCTTTGTAGCAAATATTGG+GGG 0.645637 1_4:-3181142 None:intergenic
GGTGCAAACTTCGCAACAGG+AGG 0.653307 1_4:+3181672 Msa0143940:CDS
GCCATATCTAGAGAAATAGG+AGG 0.655655 1_4:-3183568 None:intergenic
GTGGCATGTTGTGGCTATGG+AGG 0.666464 1_4:+3183373 Msa0143940:CDS
CTAGAATATATACAATTTAG+GGG 0.671423 1_4:+3182856 Msa0143940:intron
TTGAATGTACTGAATCTGAA+GGG 0.676543 1_4:-3175865 None:intergenic
TCTGCTATAAAGGATAGCCA+AGG 0.676832 1_4:+3176953 Msa0143940:CDS
CTAGAATATATACAAATTAG+GGG 0.698873 1_4:+3176862 Msa0143940:intron
ATACACAACACAGGGCCAAG+TGG 0.718066 1_4:+3182893 Msa0143940:CDS
GTTGTGTATCCAAAATGACC+TGG 0.720607 1_4:-3176885 None:intergenic
GGATGGTACACATTACACAG+AGG 0.801423 1_4:+3177407 Msa0143940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATAAAAAATAATA+AGG - chr1_4:3174957-3174976 None:intergenic 0.0%
!!! TATAAGAGTATTAATTAATT+TGG + chr1_4:3174015-3174034 Msa0143940:intron 10.0%
!!! TATATATTTTAACATAAGAA+GGG - chr1_4:3174161-3174180 None:intergenic 10.0%
!!! ACAAATTTATATTTTTTGAA+TGG - chr1_4:3174363-3174382 None:intergenic 10.0%
!!! CACATATTTTAATTTTATTT+TGG + chr1_4:3174502-3174521 Msa0143940:intron 10.0%
!!! TTGTTTCATATTTTATAATA+GGG + chr1_4:3174526-3174545 Msa0143940:intron 10.0%
!!! ATGATTTTGTATTTTTTTTT+TGG + chr1_4:3175416-3175435 Msa0143940:intron 10.0%
!!! ATCATTATTTTATTTTTTTG+AGG + chr1_4:3175477-3175496 Msa0143940:intron 10.0%
!!! TTTTACTTAACAAAAAAAAA+AGG - chr1_4:3175545-3175564 None:intergenic 10.0%
!! TTAAAACAAATTTAAATATG+AGG - chr1_4:3175607-3175626 None:intergenic 10.0%
!!! AATTATTTCTATATTTATGA+AGG + chr1_4:3175669-3175688 Msa0143940:intron 10.0%
!!! ATTATTTCTATATTTATGAA+GGG + chr1_4:3175670-3175689 Msa0143940:intron 10.0%
!! GAAATTAAAAAAGAAAAAAT+TGG - chr1_4:3176018-3176037 None:intergenic 10.0%
!!! ATATTTTAATTTAAAGTTGA+AGG + chr1_4:3177006-3177025 Msa0143940:CDS 10.0%
!! TAAAGAATAAAAAGAATTAA+TGG - chr1_4:3179746-3179765 None:intergenic 10.0%
!! AATTTAATTAAGGAAAATTT+AGG - chr1_4:3180375-3180394 None:intergenic 10.0%
!!! ATCTCATATTTTTTTATTTA+TGG + chr1_4:3180199-3180218 Msa0143940:intron 10.0%
!! AATTTAATTAAGGAAAATTT+AGG + chr1_4:3180375-3180394 Msa0143940:intron 10.0%
!! TCAAAAAAAAAAAAAAAAAC+AGG + chr1_4:3180420-3180439 Msa0143940:intron 10.0%
!! TATTAAACAATAAACATATT+CGG + chr1_4:3180966-3180985 Msa0143940:intron 10.0%
!! ATTAAAATAGAATATGTAAT+GGG - chr1_4:3181384-3181403 None:intergenic 10.0%
!!! TAATATTTTTTAAATCACAA+TGG + chr1_4:3183236-3183255 Msa0143940:intron 10.0%
!!! TATTACCTATTTTTTTGAAA+TGG - chr1_4:3172894-3172913 None:intergenic 15.0%
!!! TTGTGATTTTTAAGAAAATA+GGG - chr1_4:3173380-3173399 None:intergenic 15.0%
!! ACAATTCTTAAAAAACTAAA+AGG + chr1_4:3173479-3173498 Msa0143940:intron 15.0%
!! AAAAATTAATAGACTTAATG+TGG - chr1_4:3173655-3173674 None:intergenic 15.0%
!!! AGTCTATTAATTTTTTTCAA+AGG + chr1_4:3173660-3173679 Msa0143940:intron 15.0%
!!! GTATATATTTTAACATAAGA+AGG - chr1_4:3174162-3174181 None:intergenic 15.0%
!!! GTATAAATTTTACTTTTCAA+GGG - chr1_4:3174191-3174210 None:intergenic 15.0%
!!! AGTATAAATTTTACTTTTCA+AGG - chr1_4:3174192-3174211 None:intergenic 15.0%
!! TATTTAATTATTAAGGGATT+GGG - chr1_4:3174245-3174264 None:intergenic 15.0%
!! ATATTTAATTATTAAGGGAT+TGG - chr1_4:3174246-3174265 None:intergenic 15.0%
!! AATCCCTTAATAATTAAATA+TGG + chr1_4:3174245-3174264 Msa0143940:intron 15.0%
!! AGTCCATATTTAATTATTAA+GGG - chr1_4:3174251-3174270 None:intergenic 15.0%
!! TAGTCCATATTTAATTATTA+AGG - chr1_4:3174252-3174271 None:intergenic 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG + chr1_4:3174525-3174544 Msa0143940:intron 15.0%
!!! TATATTTTTGTTGAGATTTA+AGG - chr1_4:3175176-3175195 None:intergenic 15.0%
!!! CGTCTTTTTATTATTATATT+TGG - chr1_4:3175190-3175209 None:intergenic 15.0%
!!! AAAAAATTCTTATCTAAAAC+TGG + chr1_4:3175325-3175344 Msa0143940:intron 15.0%
!!! TCAATTGATTTTATCTTTAT+TGG - chr1_4:3175358-3175377 None:intergenic 15.0%
!!! GTAATTTTACTAAAATACTA+TGG + chr1_4:3175569-3175588 Msa0143940:intron 15.0%
!! TATGAAATTCTTTACTATAT+CGG - chr1_4:3176192-3176211 None:intergenic 15.0%
!! TAAACAAAATGATTTATGTT+TGG + chr1_4:3176374-3176393 Msa0143940:intron 15.0%
!! ATAATTACTAAAATAGACAT+AGG + chr1_4:3176427-3176446 Msa0143940:intron 15.0%
!! ATTAATAAAATGCAACTTAA+TGG + chr1_4:3176835-3176854 Msa0143940:intron 15.0%
!!! ATCTAGAATATATACAAATT+AGG + chr1_4:3176860-3176879 Msa0143940:intron 15.0%
!!! TCTAGAATATATACAAATTA+GGG + chr1_4:3176861-3176880 Msa0143940:intron 15.0%
!! TTAAATCTTCATTAATATGT+AGG + chr1_4:3177240-3177259 Msa0143940:intron 15.0%
!! TTCTTTATATTAGACATATA+TGG + chr1_4:3177588-3177607 Msa0143940:intron 15.0%
!! TATATTTACAACAAGTTTAT+TGG + chr1_4:3177645-3177664 Msa0143940:intron 15.0%
!! ACTTATTAAAATCAAACTTA+AGG + chr1_4:3178434-3178453 Msa0143940:intron 15.0%
!! CTTATTAAAATCAAACTTAA+GGG + chr1_4:3178435-3178454 Msa0143940:intron 15.0%
!!! ATTACTAATTTGTTTCAAAA+TGG - chr1_4:3178668-3178687 None:intergenic 15.0%
!! AAATTAGTAATTTCTATGAA+TGG + chr1_4:3178677-3178696 Msa0143940:intron 15.0%
!!! TAAACAAAATTTCACTTTTT+AGG - chr1_4:3179267-3179286 None:intergenic 15.0%
!!! TTCAACACATATTTTTTTAT+TGG + chr1_4:3179465-3179484 Msa0143940:intron 15.0%
!!! TTAATTCTTTAATCCTTTTA+AGG + chr1_4:3179790-3179809 Msa0143940:intron 15.0%
!! ATTATGTTTAATTCCTTAAA+AGG - chr1_4:3179806-3179825 None:intergenic 15.0%
!!! TTTTATTGAATCATCATTTT+AGG - chr1_4:3179917-3179936 None:intergenic 15.0%
!!! GTTTTATTTGTACAAAAAAA+AGG - chr1_4:3180108-3180127 None:intergenic 15.0%
!!! TTTTTTTAAGAATAGAAAAG+TGG - chr1_4:3180130-3180149 None:intergenic 15.0%
!! ATTGAATATGTAGTAATTAT+AGG + chr1_4:3180176-3180195 Msa0143940:intron 15.0%
!!! ATTTAGGTTTAAAGAATTAA+TGG + chr1_4:3180391-3180410 Msa0143940:intron 15.0%
!!! GACATTTTATCAAAAAAAAT+TGG - chr1_4:3180775-3180794 None:intergenic 15.0%
!! GATTAAAATAGAATATGTAA+TGG - chr1_4:3181385-3181404 None:intergenic 15.0%
!!! TATTTCAAAATTTTCTTATC+AGG + chr1_4:3181909-3181928 Msa0143940:intron 15.0%
!! TATGAAATTGTTTACTATAT+CGG - chr1_4:3182069-3182088 None:intergenic 15.0%
!! AAAAAAAAACATTATAGTTG+AGG + chr1_4:3182307-3182326 Msa0143940:intron 15.0%
!!! ATCTAGAATATATACAATTT+AGG + chr1_4:3182854-3182873 Msa0143940:intron 15.0%
!!! TCTAGAATATATACAATTTA+GGG + chr1_4:3182855-3182874 Msa0143940:intron 15.0%
!!! GTATTTTAATTTAAAGTTGA+AGG + chr1_4:3183000-3183019 Msa0143940:CDS 15.0%
!!! TTTTTTTGGATTTTGAAAAA+GGG - chr1_4:3183101-3183120 None:intergenic 15.0%
!!! ATTTTTTTGGATTTTGAAAA+AGG - chr1_4:3183102-3183121 None:intergenic 15.0%
!! TTTCAAAATCCAAAAAAATA+TGG + chr1_4:3183103-3183122 Msa0143940:intron 15.0%
!!! TATATGTTATTGATTTGATT+TGG + chr1_4:3183314-3183333 Msa0143940:intron 15.0%
!! ATTTCTATAAGCTATTGTAA+GGG - chr1_4:3170753-3170772 None:intergenic 20.0%
!!! AGAAATGATAAGGTTTTTAA+TGG + chr1_4:3172206-3172225 Msa0143940:intron 20.0%
!!! TTTTAGTCCTTTTGTTTATT+GGG + chr1_4:3172740-3172759 Msa0143940:intron 20.0%
!! AGAAAAAAAATTACAACAAG+GGG - chr1_4:3172818-3172837 None:intergenic 20.0%
!! GAGAAAAAAAATTACAACAA+GGG - chr1_4:3172819-3172838 None:intergenic 20.0%
!!! ATTTGCCATTTCAAAAAAAT+AGG + chr1_4:3172886-3172905 Msa0143940:intron 20.0%
!!! GTTTTATCGTAGAAATATTA+TGG + chr1_4:3173288-3173307 Msa0143940:intron 20.0%
!!! TGTGATTTTTAAGAAAATAG+GGG - chr1_4:3173379-3173398 None:intergenic 20.0%
!!! CTTGTGATTTTTAAGAAAAT+AGG - chr1_4:3173381-3173400 None:intergenic 20.0%
!!! TGAGTTATTATTTTTTTCGT+TGG + chr1_4:3173434-3173453 Msa0143940:intron 20.0%
!! TCTTAAAAAACTAAAAGGTT+TGG + chr1_4:3173484-3173503 Msa0143940:intron 20.0%
!! CAGATAATATCATATGTAAT+AGG - chr1_4:3173611-3173630 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTGAGA+CGG - chr1_4:3173703-3173722 None:intergenic 20.0%
!! CTCAAAATATAAGCAAAAAT+AGG + chr1_4:3173704-3173723 Msa0143940:intron 20.0%
!!! GTTTTTTCGTATAAATATGA+GGG - chr1_4:3173833-3173852 None:intergenic 20.0%
!!! TGTTTTTTCGTATAAATATG+AGG - chr1_4:3173834-3173853 None:intergenic 20.0%
!!! TTCATAATGTTTTTTTTTGC+TGG + chr1_4:3174056-3174075 Msa0143940:intron 20.0%
!!! TCATAATGTTTTTTTTTGCT+GGG + chr1_4:3174057-3174076 Msa0143940:intron 20.0%
!! GATTTACTCTAATATATACA+AGG - chr1_4:3174097-3174116 None:intergenic 20.0%
!! CTTCTTGTCAAAAAAAAATA+TGG + chr1_4:3174274-3174293 Msa0143940:intron 20.0%
!! AGAAATAAAAAAAATTACCG+AGG + chr1_4:3174683-3174702 Msa0143940:intron 20.0%
!! GAAATAAAAAAAATTACCGA+GGG + chr1_4:3174684-3174703 Msa0143940:intron 20.0%
!!! AACGTATATTTTAACATAAG+AGG + chr1_4:3174712-3174731 Msa0143940:intron 20.0%
!!! ACGTATATTTTAACATAAGA+GGG + chr1_4:3174713-3174732 Msa0143940:intron 20.0%
!! CTATTATGATTATTATTAGG+CGG - chr1_4:3175117-3175136 None:intergenic 20.0%
!! CACCTATTATGATTATTATT+AGG - chr1_4:3175120-3175139 None:intergenic 20.0%
!!! TAGAATAGAAAATCTCATTT+TGG - chr1_4:3175447-3175466 None:intergenic 20.0%
!! TTGGAATAATAATCTTCTTT+GGG - chr1_4:3176080-3176099 None:intergenic 20.0%
!!! TTTGGAATAATAATCTTCTT+TGG - chr1_4:3176081-3176100 None:intergenic 20.0%
!! ATGAAATTCTTTACTATATC+GGG - chr1_4:3176191-3176210 None:intergenic 20.0%
!! TAAAGAATGAGAATTGATAA+AGG + chr1_4:3176464-3176483 Msa0143940:intron 20.0%
!! GATTATGTAATTGTATTGTT+TGG - chr1_4:3176725-3176744 None:intergenic 20.0%
!! CTAGAATATATACAAATTAG+GGG + chr1_4:3176862-3176881 Msa0143940:intron 20.0%
!! TCCAAAATCCAAAAAAAATA+CGG + chr1_4:3177110-3177129 Msa0143940:intron 20.0%
!!! ATCGATCATATTTTTTAGTT+AGG + chr1_4:3177146-3177165 Msa0143940:intron 20.0%
!!! TCGATCATATTTTTTAGTTA+GGG + chr1_4:3177147-3177166 Msa0143940:intron 20.0%
!!! TTTTTTAGTTAGGGTATATT+TGG + chr1_4:3177156-3177175 Msa0143940:intron 20.0%
!!! TTTCATTGATAATTCCAAAA+AGG - chr1_4:3177625-3177644 None:intergenic 20.0%
!! TATGTTTACATCAAGAATAT+TGG + chr1_4:3177713-3177732 Msa0143940:intron 20.0%
!! ATTTGTAATGATCTAATGAA+GGG - chr1_4:3178037-3178056 None:intergenic 20.0%
!! TCTATAAATAAAACACACTA+GGG - chr1_4:3178307-3178326 None:intergenic 20.0%
!! ATTATGAAATTAAAGAAACC+CGG - chr1_4:3178398-3178417 None:intergenic 20.0%
!! CATGATAAAATCAAACTTAA+GGG + chr1_4:3178478-3178497 Msa0143940:intron 20.0%
!!! CTAATGAAAAGTATAACTAA+GGG - chr1_4:3178521-3178540 None:intergenic 20.0%
!!! CTTAGTTATACTTTTCATTA+GGG + chr1_4:3178520-3178539 Msa0143940:intron 20.0%
!! GTAAAAAAGAACAATAATAG+TGG + chr1_4:3178546-3178565 Msa0143940:intron 20.0%
!! AAACCAAACTGTTAATTTAA+TGG + chr1_4:3178574-3178593 Msa0143940:intron 20.0%
!!! TATGAATGGATTCTTTAAAT+AGG + chr1_4:3178691-3178710 Msa0143940:intron 20.0%
!! TTTAATTCATAAAATGTCGT+TGG + chr1_4:3178798-3178817 Msa0143940:intron 20.0%
!!! TTTTGTATGGTTTCTTAAAT+TGG - chr1_4:3178873-3178892 None:intergenic 20.0%
!!! AGCAATTTTCGTTATTTTTT+TGG - chr1_4:3179529-3179548 None:intergenic 20.0%
!! AAAAAGAATCGTGTATTTAA+TGG + chr1_4:3180257-3180276 Msa0143940:intron 20.0%
!! AAATCCATATTTCTTCATTA+TGG + chr1_4:3180285-3180304 Msa0143940:intron 20.0%
!! AAAAAAAAAAAACAGGTTTG+AGG + chr1_4:3180427-3180446 Msa0143940:intron 20.0%
!! TTTACTGAGTAAATTTATGT+TGG - chr1_4:3180641-3180660 None:intergenic 20.0%
!! ATGTTTGTATCACTAAAATT+TGG + chr1_4:3180687-3180706 Msa0143940:intron 20.0%
!! ACTAAATACAATTACTAGAA+AGG + chr1_4:3180862-3180881 Msa0143940:intron 20.0%
!! TATTAAGTAGAAGAAAACTT+GGG - chr1_4:3180890-3180909 None:intergenic 20.0%
!!! TATTATTCTTTTGTTTAGTG+AGG - chr1_4:3180926-3180945 None:intergenic 20.0%
!! AATTCTTTGTAGCAAATATT+GGG - chr1_4:3181147-3181166 None:intergenic 20.0%
!! CTAATAGTATTATACCTAAT+GGG + chr1_4:3181712-3181731 Msa0143940:CDS 20.0%
!! GAAATAAAGAAAGAAAAAAG+AGG - chr1_4:3181895-3181914 None:intergenic 20.0%
!! ATGAAATTGTTTACTATATC+GGG - chr1_4:3182068-3182087 None:intergenic 20.0%
!! ATCTAATAGTTGAAATCTAT+TGG - chr1_4:3182196-3182215 None:intergenic 20.0%
!! TACTATACTATTTATCAAAG+TGG - chr1_4:3182352-3182371 None:intergenic 20.0%
!! TGTCAATTCAACAAAAATAA+AGG + chr1_4:3182508-3182527 Msa0143940:intron 20.0%
!! TGTATGAATTATATGTATTG+AGG + chr1_4:3182537-3182556 Msa0143940:intron 20.0%
!!! TTCCTATGTTCTTTTTTAAA+TGG + chr1_4:3182574-3182593 Msa0143940:intron 20.0%
!! ATCCATTTAAAAAAGAACAT+AGG - chr1_4:3182579-3182598 None:intergenic 20.0%
!! ATATCATGAGAATCTATTAT+AGG - chr1_4:3182750-3182769 None:intergenic 20.0%
!! CTAGAATATATACAATTTAG+GGG + chr1_4:3182856-3182875 Msa0143940:intron 20.0%
!!! TTTAGCTTACCATATTTTTT+TGG - chr1_4:3183115-3183134 None:intergenic 20.0%
! CATTTCTATAAGCTATTGTA+AGG - chr1_4:3170754-3170773 None:intergenic 25.0%
! TAGATTTCTCTGACTTTAAA+TGG + chr1_4:3170913-3170932 Msa0143940:intron 25.0%
! AGATTTCTCTGACTTTAAAT+GGG + chr1_4:3170914-3170933 Msa0143940:intron 25.0%
! NNNNTGGAAAGAAGATTAGT+TGG + chr1_4:3171171-3171190 Msa0143940:intron 25.0%
!! NNNTGGAAAGAAGATTAGTT+GGG + chr1_4:3171172-3171191 Msa0143940:intron 25.0%
! TGTGTCAAAGTAAATGTAAT+GGG + chr1_4:3171210-3171229 Msa0143940:intron 25.0%
! TTACTCTATTTCAACTCAAA+AGG + chr1_4:3171562-3171581 Msa0143940:intron 25.0%
! TTCACAATGAATAAAAAGGT+GGG - chr1_4:3172016-3172035 None:intergenic 25.0%
! ACACTTCACAATGAATAAAA+AGG - chr1_4:3172020-3172039 None:intergenic 25.0%
! AGGAACAAAAATGTGTTAAA+AGG + chr1_4:3172137-3172156 Msa0143940:intron 25.0%
! CAAAAATGTGTTAAAAGGTT+TGG + chr1_4:3172142-3172161 Msa0143940:intron 25.0%
!! ATCATTTCTAATTTTCCACA+AGG - chr1_4:3172195-3172214 None:intergenic 25.0%
! GTGGAAAATTAGAAATGATA+AGG + chr1_4:3172196-3172215 Msa0143940:intron 25.0%
!!! TTTGTATTTTGAATGGTGTT+GGG + chr1_4:3172316-3172335 Msa0143940:intron 25.0%
! AAACAAAAGGACTAAAACAA+AGG - chr1_4:3172737-3172756 None:intergenic 25.0%
!!! GTTTTAGTCCTTTTGTTTAT+TGG + chr1_4:3172739-3172758 Msa0143940:intron 25.0%
! GGAGAAAAAAAATTACAACA+AGG - chr1_4:3172820-3172839 None:intergenic 25.0%
!!! TAATCACTTTTGAAATCAAC+TGG + chr1_4:3172968-3172987 Msa0143940:intron 25.0%
!!! TGATAATCACTTTTGAAAAG+TGG + chr1_4:3173152-3173171 Msa0143940:intron 25.0%
! GTGGTTTAACTAAAAAACAA+TGG - chr1_4:3173636-3173655 None:intergenic 25.0%
!! ACGAATTTTTCCTTGTATTT+TGG + chr1_4:3173783-3173802 Msa0143940:intron 25.0%
!! CGAATTTTTCCTTGTATTTT+GGG + chr1_4:3173784-3173803 Msa0143940:intron 25.0%
!! TTAGAGAACTTAAGTTGTAT+GGG - chr1_4:3173893-3173912 None:intergenic 25.0%
!! ATTAGAGAACTTAAGTTGTA+TGG - chr1_4:3173894-3173913 None:intergenic 25.0%
! AGAAACATATTTCTCTCATT+AGG - chr1_4:3173963-3173982 None:intergenic 25.0%
!!! CATAATGTTTTTTTTTGCTG+GGG + chr1_4:3174058-3174077 Msa0143940:intron 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG - chr1_4:3174188-3174207 None:intergenic 25.0%
! GTAATTCAAGCATCTTATAA+GGG - chr1_4:3174220-3174239 None:intergenic 25.0%
! TGTAATTCAAGCATCTTATA+AGG - chr1_4:3174221-3174240 None:intergenic 25.0%
! TTACTAAAGTCGATTAAGTA+TGG - chr1_4:3174477-3174496 None:intergenic 25.0%
! TTCAAAGAAAAATATCACTG+CGG - chr1_4:3174633-3174652 None:intergenic 25.0%
!!! CGTATATTTTAACATAAGAG+GGG + chr1_4:3174714-3174733 Msa0143940:intron 25.0%
!!! TCTAAGATGTTTTGTATAAG+AGG + chr1_4:3174776-3174795 Msa0143940:intron 25.0%
!! CTAAGATGTTTTGTATAAGA+GGG + chr1_4:3174777-3174796 Msa0143940:intron 25.0%
! AGTGTATATTTGAACATAAG+AGG + chr1_4:3174806-3174825 Msa0143940:intron 25.0%
! GTGTATATTTGAACATAAGA+GGG + chr1_4:3174807-3174826 Msa0143940:intron 25.0%
! TGTATATTTGAACATAAGAG+GGG + chr1_4:3174808-3174827 Msa0143940:intron 25.0%
! CGCCTAATAATAATCATAAT+AGG + chr1_4:3175115-3175134 Msa0143940:intron 25.0%
! TTAAGATATGGACTTAGATA+GGG - chr1_4:3175741-3175760 None:intergenic 25.0%
! ATTAAGATATGGACTTAGAT+AGG - chr1_4:3175742-3175761 None:intergenic 25.0%
! TACCCAAAACAAAGTTTATT+AGG + chr1_4:3175901-3175920 Msa0143940:CDS 25.0%
! ACCCAAAACAAAGTTTATTA+GGG + chr1_4:3175902-3175921 Msa0143940:CDS 25.0%
!!! TCCCTAATAAACTTTGTTTT+GGG - chr1_4:3175906-3175925 None:intergenic 25.0%
!!! ATCCCTAATAAACTTTGTTT+TGG - chr1_4:3175907-3175926 None:intergenic 25.0%
!! GAAATCTTTTAGTGATTTTG+AGG + chr1_4:3175971-3175990 Msa0143940:intron 25.0%
!!! AGTGATTTTGAGGTTAATTA+AGG + chr1_4:3175981-3176000 Msa0143940:intron 25.0%
!! AATTTCAAAATTTTCTTGCC+AGG + chr1_4:3176032-3176051 Msa0143940:intron 25.0%
! TGGAATAATAATCTTCTTTG+GGG - chr1_4:3176079-3176098 None:intergenic 25.0%
! ACCTATATCAAATGTGTATA+AGG - chr1_4:3176105-3176124 None:intergenic 25.0%
! GAATTTCATAGAGAATATCA+AGG + chr1_4:3176202-3176221 Msa0143940:intron 25.0%
!! TGAGAGAATTGATTTATGTT+TGG + chr1_4:3176330-3176349 Msa0143940:intron 25.0%
! ACTAAAATAGACATAGGTAA+AGG + chr1_4:3176433-3176452 Msa0143940:intron 25.0%
! TGTAATTGTATTGTTTGGTT+TGG - chr1_4:3176720-3176739 None:intergenic 25.0%
!!! ACCGTATTTTTTTTGGATTT+TGG - chr1_4:3177114-3177133 None:intergenic 25.0%
! GGAGAAATCATAAACATAAA+TGG + chr1_4:3177333-3177352 Msa0143940:CDS 25.0%
! AACCATCTACTAGAATAATA+TGG + chr1_4:3177385-3177404 Msa0143940:CDS 25.0%
! ACCATCTACTAGAATAATAT+GGG + chr1_4:3177386-3177405 Msa0143940:CDS 25.0%
! AGAACAACTTTACATTCTAA+AGG + chr1_4:3177837-3177856 Msa0143940:intron 25.0%
! AACAAGAATAATTCTCTGAA+AGG + chr1_4:3177926-3177945 Msa0143940:intron 25.0%
!! AATCAATTTTCCCTTCATTT+TGG - chr1_4:3177974-3177993 None:intergenic 25.0%
! CATTTGTAATGATCTAATGA+AGG - chr1_4:3178038-3178057 None:intergenic 25.0%
!! TGAGAGAAATTTTGTTCATT+TGG - chr1_4:3178189-3178208 None:intergenic 25.0%
! GTCTATAAATAAAACACACT+AGG - chr1_4:3178308-3178327 None:intergenic 25.0%
!!! CCTTAAGTTTGATTTTATCA+TGG - chr1_4:3178480-3178499 None:intergenic 25.0%
! CCATGATAAAATCAAACTTA+AGG + chr1_4:3178477-3178496 Msa0143940:intron 25.0%
!! CCTAATGAAAAGTATAACTA+AGG - chr1_4:3178522-3178541 None:intergenic 25.0%
!! CCTTAGTTATACTTTTCATT+AGG + chr1_4:3178519-3178538 Msa0143940:intron 25.0%
!! TAGTCTGGTTTAATTCAAAA+CGG - chr1_4:3178622-3178641 None:intergenic 25.0%
! GTTTCAAAATGGTTCATTAA+CGG - chr1_4:3178657-3178676 None:intergenic 25.0%
!! TTAAATCGAACTCTATTTTC+TGG - chr1_4:3178921-3178940 None:intergenic 25.0%
!!! TCGATTTAAAATGTCGATTT+AGG + chr1_4:3178932-3178951 Msa0143940:intron 25.0%
!!! TTAAAATGTCGATTTAGGTT+TGG + chr1_4:3178937-3178956 Msa0143940:intron 25.0%
!!! TAAAATGTCGATTTAGGTTT+GGG + chr1_4:3178938-3178957 Msa0143940:intron 25.0%
! AAATTGGACAATATTGTTTG+TGG - chr1_4:3179030-3179049 None:intergenic 25.0%
!!! TTTGGTTTTCTTCCAAAAAT+TGG + chr1_4:3179074-3179093 Msa0143940:intron 25.0%
! TCGTTCATTAAATGAAAAGT+AGG - chr1_4:3179111-3179130 None:intergenic 25.0%
!!! ATTGAACAGTTGATGTATTT+TGG - chr1_4:3179241-3179260 None:intergenic 25.0%
!! GGTTTTTGTCAAAAAAAAAC+AGG - chr1_4:3179725-3179744 None:intergenic 25.0%
! ACGTTTCTTAGTTAAAAAGA+GGG - chr1_4:3180155-3180174 None:intergenic 25.0%
! TTTGTATCACTAAAATTTGG+TGG + chr1_4:3180690-3180709 Msa0143940:intron 25.0%
! CAAAAAAAATTGGACACATA+TGG - chr1_4:3180765-3180784 None:intergenic 25.0%
! TGTATTTAGTTAATCACCTT+TGG - chr1_4:3180852-3180871 None:intergenic 25.0%
! GTATTAAGTAGAAGAAAACT+TGG - chr1_4:3180891-3180910 None:intergenic 25.0%
! ATTCTTTGTAGCAAATATTG+GGG - chr1_4:3181146-3181165 None:intergenic 25.0%
! CAATTCTTTGTAGCAAATAT+TGG - chr1_4:3181148-3181167 None:intergenic 25.0%
!! ACATATTTTCATAGATCAAC+TGG + chr1_4:3181262-3181281 Msa0143940:CDS 25.0%
!!! CGAATCATTATTGATTTCAT+AGG + chr1_4:3181301-3181320 Msa0143940:CDS 25.0%
! TTAAGATATGGACTTAGATA+GGG - chr1_4:3175741-3175760 None:intergenic 25.0%
! ATTAAGATATGGACTTAGAT+AGG - chr1_4:3175742-3175761 None:intergenic 25.0%
! CCATTAGGTATAATACTATT+AGG - chr1_4:3181714-3181733 None:intergenic 25.0%
! CCTAATAGTATTATACCTAA+TGG + chr1_4:3181711-3181730 Msa0143940:CDS 25.0%
! TACTGAATTTGAAGAGAAAA+TGG - chr1_4:3181747-3181766 None:intergenic 25.0%
!!! ATCTCTAATGAGATTTGTTT+TGG - chr1_4:3181793-3181812 None:intergenic 25.0%
! ACAAATCTCATTAGAGATAA+AGG + chr1_4:3181795-3181814 Msa0143940:CDS 25.0%
!! TTCAAAATTTTCTTATCAGG+AGG + chr1_4:3181912-3181931 Msa0143940:intron 25.0%
! TTGGAAAAATAGTCTTCTTT+GGG - chr1_4:3181957-3181976 None:intergenic 25.0%
! ACCAATATCAAATGTGTATA+AGG - chr1_4:3181982-3182001 None:intergenic 25.0%
! ATTGGTCAAAATGATCTTAT+TGG + chr1_4:3181996-3182015 Msa0143940:CDS 25.0%
! CTAGAAATTACTCATGATAT+CGG - chr1_4:3182661-3182680 None:intergenic 25.0%
!!! TTTGAGATATTTTCAAGTGT+TGG + chr1_4:3182683-3182702 Msa0143940:intron 25.0%
!!! TTACTGTTTGTTTTGATTGA+CGG + chr1_4:3183156-3183175 Msa0143940:intron 25.0%
! AAATGGTACAAAAATTGTTG+CGG + chr1_4:3183438-3183457 Msa0143940:CDS 25.0%
AGTTGTTTACTATACTCACT+TGG + chr1_4:3170839-3170858 Msa0143940:intron 30.0%
GTTGTTTACTATACTCACTT+GGG + chr1_4:3170840-3170859 Msa0143940:intron 30.0%
GTGTGTCAAAGTAAATGTAA+TGG + chr1_4:3171209-3171228 Msa0143940:intron 30.0%
GTGTCAAAGTAAATGTAATG+GGG + chr1_4:3171211-3171230 Msa0143940:intron 30.0%
TGTCAAAGTAAATGTAATGG+GGG + chr1_4:3171212-3171231 Msa0143940:intron 30.0%
! AAGGAATTTTTGCCAACTTA+TGG + chr1_4:3171840-3171859 Msa0143940:intron 30.0%
CTTCACAATGAATAAAAAGG+TGG - chr1_4:3172017-3172036 None:intergenic 30.0%
AATGAACAAAAAGATTGGGA+GGG - chr1_4:3172095-3172114 None:intergenic 30.0%
! TCCCAATCTTTTTGTTCATT+GGG + chr1_4:3172095-3172114 Msa0143940:intron 30.0%
AAATGTGTTAAAAGGTTTGG+AGG + chr1_4:3172145-3172164 Msa0143940:intron 30.0%
!! TGATTTGGTTAGCTACTATT+TGG + chr1_4:3172168-3172187 Msa0143940:intron 30.0%
CATTCAAAATACAAACAAGC+CGG - chr1_4:3172311-3172330 None:intergenic 30.0%
!! GTTTGTATTTTGAATGGTGT+TGG + chr1_4:3172315-3172334 Msa0143940:intron 30.0%
AAAACCACCCAATAAACAAA+AGG - chr1_4:3172750-3172769 None:intergenic 30.0%
! TTTATTGGGTGGTTTTTGAA+GGG + chr1_4:3172754-3172773 Msa0143940:intron 30.0%
AAATTACAACAAGGGGAAAT+CGG - chr1_4:3172811-3172830 None:intergenic 30.0%
CGAATCATTCTTGATTTCAT+AGG + chr1_4:3173007-3173026 Msa0143940:intron 30.0%
!! GTGATAATCACTGATTTCAT+AGG + chr1_4:3173085-3173104 Msa0143940:intron 30.0%
TTAGAGAATCCAAGTTGTAT+AGG + chr1_4:3173242-3173261 Msa0143940:intron 30.0%
!! TTTTTAAGAAAATAGGGGTG+AGG - chr1_4:3173374-3173393 None:intergenic 30.0%
!! GTTTGATGATGTATCTTCTA+CGG - chr1_4:3173545-3173564 None:intergenic 30.0%
! CTAGTATTCGTGTATTGATA+AGG - chr1_4:3173576-3173595 None:intergenic 30.0%
!! TTTTTCCTTGTATTTTGGGA+CGG + chr1_4:3173788-3173807 Msa0143940:intron 30.0%
ATACTCTTATAGTAGATGCA+CGG - chr1_4:3174006-3174025 None:intergenic 30.0%
ACTCTAATATATACAAGGTC+CGG - chr1_4:3174092-3174111 None:intergenic 30.0%
TGTAATTCAAGCATCTTTGA+GGG - chr1_4:3174837-3174856 None:intergenic 30.0%
TCAAAGAAAAATATCACTGC+GGG - chr1_4:3174632-3174651 None:intergenic 30.0%
!! AAATATACGTTTTAGTCCCT+CGG - chr1_4:3174703-3174722 None:intergenic 30.0%
!!! TATTTTAACATAAGAGGGGA+TGG + chr1_4:3174718-3174737 Msa0143940:intron 30.0%
! ATGTTTTGTATAAGAGGGAA+GGG + chr1_4:3174782-3174801 Msa0143940:intron 30.0%
TGTAATTCAAGCATCTTTGA+GGG + chr1_4:3174837-3174856 Msa0143940:intron 30.0%
TTGTATATGTTGAGCTTACA+TGG + chr1_4:3175631-3175650 Msa0143940:intron 30.0%
AGTCCATATCTTAATTCTCT+TGG + chr1_4:3175747-3175766 Msa0143940:CDS 30.0%
GTCCATATCTTAATTCTCTT+GGG + chr1_4:3175748-3175767 Msa0143940:CDS 30.0%
CCATTAGGTATAATGTTGTT+AGG - chr1_4:3175828-3175847 None:intergenic 30.0%
CCTAACAACATTATACCTAA+TGG + chr1_4:3175825-3175844 Msa0143940:CDS 30.0%
TTGAATGTACTGAATCTGAA+GGG - chr1_4:3175868-3175887 None:intergenic 30.0%
ATTGAATGTACTGAATCTGA+AGG - chr1_4:3175869-3175888 None:intergenic 30.0%
ACAAAGTTTATTAGGGATCA+AGG + chr1_4:3175909-3175928 Msa0143940:CDS 30.0%
ATCAAATGTGTATAAGGCTT+TGG - chr1_4:3176099-3176118 None:intergenic 30.0%
GCCTTATACACATTTGATAT+AGG + chr1_4:3176101-3176120 Msa0143940:CDS 30.0%
ATATTCAAAGCTGAACCAAA+CGG - chr1_4:3176256-3176275 None:intergenic 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG + chr1_4:3176651-3176670 Msa0143940:intron 30.0%
!! CACTGTAGAGAATTGATTTT+GGG + chr1_4:3176674-3176693 Msa0143940:intron 30.0%
GGAAAATTGGCCAAAATTAA+AGG - chr1_4:3176932-3176951 None:intergenic 30.0%
CTTTATAGCAGATGGAAAAT+TGG - chr1_4:3176945-3176964 None:intergenic 30.0%
! CAATTTTCCATCTGCTATAA+AGG + chr1_4:3176943-3176962 Msa0143940:CDS 30.0%
!!! TTTTGGAAAAGAGAGTACTT+AGG - chr1_4:3177097-3177116 None:intergenic 30.0%
!!! TTGTCTCACCGTATTTTTTT+TGG - chr1_4:3177121-3177140 None:intergenic 30.0%
AATGGTACAAACATTGTTGT+TGG + chr1_4:3177351-3177370 Msa0143940:CDS 30.0%
TCCCATATTATTCTAGTAGA+TGG - chr1_4:3177390-3177409 None:intergenic 30.0%
TCTACTAGAATAATATGGGA+TGG + chr1_4:3177390-3177409 Msa0143940:CDS 30.0%
CAAGTTTATTGGAACAATCA+TGG + chr1_4:3177656-3177675 Msa0143940:intron 30.0%
TTTATTGGAACAATCATGGA+AGG + chr1_4:3177660-3177679 Msa0143940:intron 30.0%
!!! TGGCAACTTTAGTTTTTACT+TGG + chr1_4:3177733-3177752 Msa0143940:intron 30.0%
!!! TTTAGTTTTTACTTGGCCTT+GGG + chr1_4:3177740-3177759 Msa0143940:intron 30.0%
TCATCAAAACCAAAAACTAG+AGG - chr1_4:3177803-3177822 None:intergenic 30.0%
!! TAGAATCGATTTGACTACAA+TGG - chr1_4:3178104-3178123 None:intergenic 30.0%
AACAAAATTTCTCTCATGAC+CGG + chr1_4:3178193-3178212 Msa0143940:intron 30.0%
! AGCATGCACATCATATTTTA+TGG + chr1_4:3178331-3178350 Msa0143940:intron 30.0%
CTTAAATACACAGTTCCTTA+CGG + chr1_4:3178368-3178387 Msa0143940:intron 30.0%
CGACCATTAAATTAACAGTT+TGG - chr1_4:3178580-3178599 None:intergenic 30.0%
! AATTCAAAACGGTTTGTTCA+TGG - chr1_4:3178611-3178630 None:intergenic 30.0%
!!! CTCAGTTGTGTTTTTTTGTA+TGG - chr1_4:3178886-3178905 None:intergenic 30.0%
!! AAAATGTCGATTTAGGTTTG+GGG + chr1_4:3178939-3178958 Msa0143940:intron 30.0%
CTGAATCATAAACTCTTGTT+CGG + chr1_4:3178988-3179007 Msa0143940:intron 30.0%
GACAATATTGTTTGTGGTTT+AGG - chr1_4:3179024-3179043 None:intergenic 30.0%
ATTAAATGAAAAGTAGGCCT+GGG - chr1_4:3179105-3179124 None:intergenic 30.0%
TTGTTTATGATTGAGACCAA+AGG + chr1_4:3179280-3179299 Msa0143940:intron 30.0%
TGTTTATGATTGAGACCAAA+GGG + chr1_4:3179281-3179300 Msa0143940:intron 30.0%
ATCAATCAACTTTCCATTGA+CGG - chr1_4:3179326-3179345 None:intergenic 30.0%
TGTCTTTCAATCGATTAAGA+AGG + chr1_4:3179371-3179390 Msa0143940:intron 30.0%
GTCAAAAAAAAACAGGTTTG+AGG - chr1_4:3179718-3179737 None:intergenic 30.0%
CTCTCGTATTTCTTCATTTA+TGG - chr1_4:3179862-3179881 None:intergenic 30.0%
TATCTGCAATCAGTAGTTAA+TGG + chr1_4:3179890-3179909 Msa0143940:intron 30.0%
CACGTTTCTTAGTTAAAAAG+AGG - chr1_4:3180156-3180175 None:intergenic 30.0%
GTTGCCATAATGAAGAAATA+TGG - chr1_4:3180292-3180311 None:intergenic 30.0%
TAACTGCCGAATTATAAAAC+CGG - chr1_4:3180534-3180553 None:intergenic 30.0%
! TATCACTAAAATTTGGTGGA+AGG + chr1_4:3180694-3180713 Msa0143940:intron 30.0%
TTAATCACCTTTGGTTGAAA+AGG - chr1_4:3180843-3180862 None:intergenic 30.0%
GATCATATCATATAGTCCAT+AGG + chr1_4:3181027-3181046 Msa0143940:intron 30.0%
ATGAATTTCATGAAGCACAA+AGG - chr1_4:3181055-3181074 None:intergenic 30.0%
TTTGTGCTTCATGAAATTCA+TGG + chr1_4:3181054-3181073 Msa0143940:intron 30.0%
TTCTTTGTAGCAAATATTGG+GGG - chr1_4:3181145-3181164 None:intergenic 30.0%
TGAAAATATGTCTCTCCATA+TGG - chr1_4:3181253-3181272 None:intergenic 30.0%
TAGAACTCTCAAATAGAGTT+TGG - chr1_4:3181351-3181370 None:intergenic 30.0%
GTCTACTTGGAGAAAAATAA+TGG - chr1_4:3181423-3181442 None:intergenic 30.0%
GTATGTATTCTATGGAAGTT+TGG - chr1_4:3181466-3181485 None:intergenic 30.0%
TGTTATCGGTATGTATTCTA+TGG - chr1_4:3181474-3181493 None:intergenic 30.0%
TCACAGTATTACAATACTGA+AGG + chr1_4:3181527-3181546 Msa0143940:intron 30.0%
AGTCCATATCTTAATTCTCT+TGG + chr1_4:3175747-3175766 Msa0143940:CDS 30.0%
GTCCATATCTTAATTCTCTT+GGG + chr1_4:3175748-3175767 Msa0143940:CDS 30.0%
!! AATGGACTAAATATCCCATT+AGG - chr1_4:3181729-3181748 None:intergenic 30.0%
AAAGATATCAACGAGAACAA+CGG - chr1_4:3181837-3181856 None:intergenic 30.0%
! TTGTTCTCGTTGATATCTTT+TGG + chr1_4:3181837-3181856 Msa0143940:intron 30.0%
!! GGTGATTTCGAGTTTAATTA+AGG + chr1_4:3181858-3181877 Msa0143940:intron 30.0%
TGGAAAAATAGTCTTCTTTG+GGG - chr1_4:3181956-3181975 None:intergenic 30.0%
GTTGGAAAAATAGTCTTCTT+TGG - chr1_4:3181958-3181977 None:intergenic 30.0%
GCCTTATACACATTTGATAT+TGG + chr1_4:3176101-3176120 Msa0143940:CDS 30.0%
!! GATCTTATTGGTGGTTATTT+TGG + chr1_4:3182008-3182027 Msa0143940:CDS 30.0%
!! CAATTTCATAGAGAGTATCA+AGG + chr1_4:3182079-3182098 Msa0143940:CDS 30.0%
TTATTTAGACACTATAGTCG+AGG + chr1_4:3182260-3182279 Msa0143940:intron 30.0%
ACTGATGAAATGAAACTTGT+TGG + chr1_4:3182829-3182848 Msa0143940:intron 30.0%
ATATATACAATTTAGGGGCT+AGG + chr1_4:3182861-3182880 Msa0143940:CDS 30.0%
TAATTTCCCATCTGCAATAA+AGG + chr1_4:3182937-3182956 Msa0143940:CDS 30.0%
AACTATCCTTTATTGCAGAT+GGG - chr1_4:3182946-3182965 None:intergenic 30.0%
TAACTATCCTTTATTGCAGA+TGG - chr1_4:3182947-3182966 None:intergenic 30.0%
TCTGCAATAAAGGATAGTTA+TGG + chr1_4:3182947-3182966 Msa0143940:CDS 30.0%
!!! TTTTGAAAAAGGGAGTACTT+AGG - chr1_4:3183091-3183110 None:intergenic 30.0%
GGAGCAACTATAAACATAAA+TGG + chr1_4:3183421-3183440 Msa0143940:CDS 30.0%
AATGGTACAAAAATTGTTGC+GGG + chr1_4:3183439-3183458 Msa0143940:CDS 30.0%
TACAACCCAAGTGAAAATGA+GGG - chr1_4:3170804-3170823 None:intergenic 35.0%
TTTACTATACTCACTTGGGT+TGG + chr1_4:3170844-3170863 Msa0143940:intron 35.0%
! TATTGGAACCTAGGATTAGT+CGG + chr1_4:3170946-3170965 Msa0143940:intron 35.0%
! AGAAGATTAGTTGGGTGAAA+TGG + chr1_4:3171180-3171199 Msa0143940:intron 35.0%
! GAAGATTAGTTGGGTGAAAT+GGG + chr1_4:3171181-3171200 Msa0143940:intron 35.0%
! AAGTAAATGTAATGGGGGTT+TGG + chr1_4:3171217-3171236 Msa0143940:intron 35.0%
! AGTAAATGTAATGGGGGTTT+GGG + chr1_4:3171218-3171237 Msa0143940:intron 35.0%
!! ATGTGTGCCTTTTAGCTAAA+TGG + chr1_4:3171264-3171283 Msa0143940:intron 35.0%
! TTGTTGGTAGGTGATAATGT+GGG + chr1_4:3171365-3171384 Msa0143940:intron 35.0%
!!! ATGGTCTTACTTCTAGCTTT+TGG + chr1_4:3171489-3171508 Msa0143940:intron 35.0%
AAAGCCTTGGATATTTACTC+CGG - chr1_4:3171544-3171563 None:intergenic 35.0%
GTTGAAATAGAGTAAAGCCT+TGG - chr1_4:3171557-3171576 None:intergenic 35.0%
CTCTATTTCAACTCAAAAGG+AGG + chr1_4:3171565-3171584 Msa0143940:intron 35.0%
GATGAGGTTGAATGATCAAA+TGG + chr1_4:3171709-3171728 Msa0143940:intron 35.0%
AGGTTGAATGATCAAATGGA+TGG + chr1_4:3171713-3171732 Msa0143940:intron 35.0%
TGAATGATCAAATGGATGGT+TGG + chr1_4:3171717-3171736 Msa0143940:intron 35.0%
CACACTCTCCAACTTATTAT+AGG - chr1_4:3171786-3171805 None:intergenic 35.0%
AATGAATAAAAAGGTGGGAG+TGG - chr1_4:3172011-3172030 None:intergenic 35.0%
TGTTAATGAGGTGGTTAGAT+AGG + chr1_4:3172058-3172077 Msa0143940:intron 35.0%
ATGAACAAAAAGATTGGGAG+GGG - chr1_4:3172094-3172113 None:intergenic 35.0%
CAATGAACAAAAAGATTGGG+AGG - chr1_4:3172096-3172115 None:intergenic 35.0%
! CTCCCAATCTTTTTGTTCAT+TGG + chr1_4:3172094-3172113 Msa0143940:intron 35.0%
GCCCAATGAACAAAAAGATT+GGG - chr1_4:3172099-3172118 None:intergenic 35.0%
AGCCCAATGAACAAAAAGAT+TGG - chr1_4:3172100-3172119 None:intergenic 35.0%
! TTTTTGTTCATTGGGCTTGT+TGG + chr1_4:3172103-3172122 Msa0143940:intron 35.0%
TAAAAGGTTTGGAGGTGATT+TGG + chr1_4:3172153-3172172 Msa0143940:intron 35.0%
!! TTTTAATGGTACTAGCTCTC+AGG + chr1_4:3172220-3172239 Msa0143940:intron 35.0%
!! CGGCTTGTTTGTATTTTGAA+TGG + chr1_4:3172309-3172328 Msa0143940:intron 35.0%
!! ATCCTATTTGGTGTTTGTGT+AGG + chr1_4:3172339-3172358 Msa0143940:intron 35.0%
!! TAGTCCTTTTGTTTATTGGG+TGG + chr1_4:3172743-3172762 Msa0143940:intron 35.0%
! GTTTATTGGGTGGTTTTTGA+AGG + chr1_4:3172753-3172772 Msa0143940:intron 35.0%
!! TTATTGGGTGGTTTTTGAAG+GGG + chr1_4:3172755-3172774 Msa0143940:intron 35.0%
! TCAACTGGAAGATTTTCTGA+TGG + chr1_4:3172983-3173002 Msa0143940:intron 35.0%
!!! GAGAATGTTTTTTGACACCA+TGG + chr1_4:3173180-3173199 Msa0143940:intron 35.0%
TCTAAATCTAACAGTCTCCA+TGG - chr1_4:3173200-3173219 None:intergenic 35.0%
GACTTGAAACCTATACAACT+TGG - chr1_4:3173254-3173273 None:intergenic 35.0%
GTGCGTGCAACTATAATATT+TGG + chr1_4:3173859-3173878 Msa0143940:intron 35.0%
TCTAATATATACAAGGTCCG+GGG - chr1_4:3174090-3174109 None:intergenic 35.0%
CTCTAATATATACAAGGTCC+GGG - chr1_4:3174091-3174110 None:intergenic 35.0%
GTAATTCAAGCATCTTTGAG+GGG - chr1_4:3174838-3174857 None:intergenic 35.0%
GTGTAATTCAAGCATCTTTG+AGG - chr1_4:3174836-3174855 None:intergenic 35.0%
TTCAAGCATCTTATAAGGGA+GGG - chr1_4:3174216-3174235 None:intergenic 35.0%
ATTCAAGCATCTTATAAGGG+AGG - chr1_4:3174217-3174236 None:intergenic 35.0%
! GATGTTTTGTATAAGAGGGA+AGG + chr1_4:3174781-3174800 Msa0143940:intron 35.0%
ATATTTGAACATAAGAGGGG+AGG + chr1_4:3174811-3174830 Msa0143940:intron 35.0%
TATTTGAACATAAGAGGGGA+GGG + chr1_4:3174812-3174831 Msa0143940:intron 35.0%
GTGTAATTCAAGCATCTTTG+AGG + chr1_4:3174836-3174855 Msa0143940:intron 35.0%
GTAATTCAAGCATCTTTGAG+GGG + chr1_4:3174838-3174857 Msa0143940:intron 35.0%
CACAACGACTCATTCATAAA+TGG + chr1_4:3174918-3174937 Msa0143940:intron 35.0%
GACCCAAGAGAATTAAGATA+TGG - chr1_4:3175753-3175772 None:intergenic 35.0%
! CTTGGGTCAAATTTTACACA+TGG + chr1_4:3175765-3175784 Msa0143940:CDS 35.0%
!! AATGGACTGAACATTCCATT+AGG - chr1_4:3175843-3175862 None:intergenic 35.0%
TACTGAATCTGAAGGGAAAA+TGG - chr1_4:3175861-3175880 None:intergenic 35.0%
! TTCAAAATTTTCTTGCCAGG+AGG + chr1_4:3176035-3176054 Msa0143940:intron 35.0%
! GATCTTACTGCTGGATTTTT+CGG + chr1_4:3176131-3176150 Msa0143940:CDS 35.0%
TATTCAAAGCTGAACCAAAC+GGG - chr1_4:3176255-3176274 None:intergenic 35.0%
AAACCTATACACGTTGTTCA+AGG + chr1_4:3176527-3176546 Msa0143940:intron 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG + chr1_4:3176558-3176577 Msa0143940:intron 35.0%
!! TGAACCAAACACGTTGTTTT+TGG + chr1_4:3176635-3176654 Msa0143940:intron 35.0%
!! GCACTGTAGAGAATTGATTT+TGG + chr1_4:3176673-3176692 Msa0143940:intron 35.0%
ATATATACAAATTAGGGGCC+AGG + chr1_4:3176867-3176886 Msa0143940:CDS 35.0%
! TCATTTTGGATACACAACAC+TGG + chr1_4:3176890-3176909 Msa0143940:CDS 35.0%
! ATTAAAGGCACACATCCAAT+TGG - chr1_4:3176917-3176936 None:intergenic 35.0%
!! TGGATGTGTGCCTTTAATTT+TGG + chr1_4:3176919-3176938 Msa0143940:CDS 35.0%
GTTAGGGTATATTTGGATTG+CGG + chr1_4:3177163-3177182 Msa0143940:intron 35.0%
TATAACATTCGTGCTAGATG+TGG + chr1_4:3177312-3177331 Msa0143940:intron 35.0%
TTGTAACATGCCCTATTTAG+TGG - chr1_4:3177492-3177511 None:intergenic 35.0%
!!! TGGTTTTGTAGCAACCTTTT+TGG + chr1_4:3177608-3177627 Msa0143940:intron 35.0%
TCTAGAAGTTGGCAAATATG+CGG - chr1_4:3177691-3177710 None:intergenic 35.0%
!! GTAAACATAGCTCTAGAAGT+TGG - chr1_4:3177702-3177721 None:intergenic 35.0%
!!! CTTTAGTTTTTACTTGGCCT+TGG + chr1_4:3177739-3177758 Msa0143940:intron 35.0%
CATTGTTCTTCAAACCACTT+TGG - chr1_4:3177779-3177798 None:intergenic 35.0%
!!! GAACAATGACCTCTAGTTTT+TGG + chr1_4:3177791-3177810 Msa0143940:intron 35.0%
!! CTCTGAAAGGTTTTTACAGA+AGG + chr1_4:3177939-3177958 Msa0143940:intron 35.0%
! GAAAGGTTTTTACAGAAGGA+AGG + chr1_4:3177943-3177962 Msa0143940:intron 35.0%
ATGAGATTCAAAGAGTAGCT+AGG + chr1_4:3178248-3178267 Msa0143940:intron 35.0%
TGAGATTCAAAGAGTAGCTA+GGG + chr1_4:3178249-3178268 Msa0143940:intron 35.0%
! TCCAATTTTCCTGAACCATT+AGG + chr1_4:3179042-3179061 Msa0143940:intron 35.0%
TCCTAATGGTTCAGGAAAAT+TGG - chr1_4:3179046-3179065 None:intergenic 35.0%
! ATTTTCCTGAACCATTAGGA+TGG + chr1_4:3179046-3179065 Msa0143940:intron 35.0%
CATTAAATGAAAAGTAGGCC+TGG - chr1_4:3179106-3179125 None:intergenic 35.0%
TGAACGATTTCAAAGTCAAC+AGG + chr1_4:3179124-3179143 Msa0143940:intron 35.0%
!! ACCAAAGGGAGTATTAAAGA+TGG + chr1_4:3179295-3179314 Msa0143940:intron 35.0%
TCCATCTTTAATACTCCCTT+TGG - chr1_4:3179299-3179318 None:intergenic 35.0%
GAAGGACTTTCACAAGAATT+TGG + chr1_4:3179389-3179408 Msa0143940:intron 35.0%
CTAAACTGTGAGATACACAA+TGG - chr1_4:3179497-3179516 None:intergenic 35.0%
! AAAGACGTTTTTACCCCTTT+CGG + chr1_4:3179584-3179603 Msa0143940:intron 35.0%
TAACTGCCGAATTATGAAAC+CGG + chr1_4:3179611-3179630 Msa0143940:intron 35.0%
TTAACTACCGAGGAAAACTT+CGG + chr1_4:3179640-3179659 Msa0143940:intron 35.0%
CTGAGGAAATCTGAAAACTT+CGG + chr1_4:3179673-3179692 Msa0143940:intron 35.0%
CCGAGGAAAATTGAAAACTT+CGG - chr1_4:3180472-3180491 None:intergenic 35.0%
! CCGAAGTTTTCAATTTTCCT+CGG + chr1_4:3180469-3180488 Msa0143940:intron 35.0%
TTAACTACCGAGGAAAACTT+CGG - chr1_4:3179640-3179659 None:intergenic 35.0%
! AAAAGACGTTTTTACCCCTT+CGG - chr1_4:3179583-3179602 None:intergenic 35.0%
! TGTTTGACCTTTTCAACCAA+AGG + chr1_4:3180833-3180852 Msa0143940:intron 35.0%
TGGCAAAATTTGAGCTTCTT+AGG + chr1_4:3181074-3181093 Msa0143940:intron 35.0%
! TTTCCTGCCATATTTAGCTT+TGG + chr1_4:3181172-3181191 Msa0143940:CDS 35.0%
! TGAAGCACCAAAGCTAAATA+TGG - chr1_4:3181182-3181201 None:intergenic 35.0%
!! GATGTGTTGAGGTTTGTTAT+CGG - chr1_4:3181488-3181507 None:intergenic 35.0%
AAGCTATATGTGATGTGTTG+AGG - chr1_4:3181499-3181518 None:intergenic 35.0%
GACCCAAGAGAATTAAGATA+TGG - chr1_4:3175753-3175772 None:intergenic 35.0%
ATCAAATGTGTATAAGGCGT+TGG - chr1_4:3181976-3181995 None:intergenic 35.0%
GGTCAAAATGATCTTATTGG+TGG + chr1_4:3181999-3182018 Msa0143940:CDS 35.0%
CATAAGAACGATGATGATTG+TGG - chr1_4:3182442-3182461 None:intergenic 35.0%
CGTTCTTATGAGTAAGATTG+TGG + chr1_4:3182452-3182471 Msa0143940:intron 35.0%
TCGTTAACCACTCATTAAAG+TGG + chr1_4:3182710-3182729 Msa0143940:intron 35.0%
CGTTAACCACTCATTAAAGT+GGG + chr1_4:3182711-3182730 Msa0143940:intron 35.0%
! TCATTTTGGATACACAACAC+AGG + chr1_4:3176890-3176909 Msa0143940:CDS 35.0%
! CATTTTGGATACACAACACA+GGG + chr1_4:3182885-3182904 Msa0143940:CDS 35.0%
TGGAAGCTTGATTAACATGT+AGG + chr1_4:3183334-3183353 Msa0143940:intron 35.0%
! GGAAAGTACAACATTCATGT+TGG + chr1_4:3183394-3183413 Msa0143940:CDS 35.0%
TACAACATTCATGTTGGATG+TGG + chr1_4:3183400-3183419 Msa0143940:CDS 35.0%
ACCCATCTACTAGAATCATT+TGG + chr1_4:3183473-3183492 Msa0143940:CDS 35.0%
CCCAAATGATTCTAGTAGAT+GGG - chr1_4:3183477-3183496 None:intergenic 35.0%
CCCATCTACTAGAATCATTT+GGG + chr1_4:3183474-3183493 Msa0143940:CDS 35.0%
TCCCAAATGATTCTAGTAGA+TGG - chr1_4:3183478-3183497 None:intergenic 35.0%
TCTACTAGAATCATTTGGGA+TGG + chr1_4:3183478-3183497 Msa0143940:CDS 35.0%
GTCTTTGATCAAATCTCTAC+TGG + chr1_4:3177444-3177463 Msa0143940:CDS 35.0%
! TCCTCCTATTTCTCTAGATA+TGG + chr1_4:3183567-3183586 Msa0143940:CDS 35.0%
CATGCCATATCTAGAGAAAT+AGG - chr1_4:3183574-3183593 None:intergenic 35.0%
! AGTATGCCCTCATTTTCACT+TGG + chr1_4:3170795-3170814 Msa0143940:intron 40.0%
! GTATGCCCTCATTTTCACTT+GGG + chr1_4:3170796-3170815 Msa0143940:intron 40.0%
CTACAACCCAAGTGAAAATG+AGG - chr1_4:3170805-3170824 None:intergenic 40.0%
CTCTGACTTTAAATGGGAGA+CGG + chr1_4:3170920-3170939 Msa0143940:intron 40.0%
TCCAACGCCATTTAGCTAAA+AGG - chr1_4:3171274-3171293 None:intergenic 40.0%
!! TTTTAGCTAAATGGCGTTGG+AGG + chr1_4:3171273-3171292 Msa0143940:intron 40.0%
! GTTATGGAAAGAGGCTTTGA+GGG + chr1_4:3171316-3171335 Msa0143940:intron 40.0%
! CTCATGTGTGGATAACTTGT+TGG + chr1_4:3171349-3171368 Msa0143940:intron 40.0%
!! TGTGTGGATAACTTGTTGGT+AGG + chr1_4:3171353-3171372 Msa0143940:intron 40.0%
! CTTGTTGGTAGGTGATAATG+TGG + chr1_4:3171364-3171383 Msa0143940:intron 40.0%
! TGTTGGTAGGTGATAATGTG+GGG + chr1_4:3171366-3171385 Msa0143940:intron 40.0%
! TGCTCCTAATTGGTTCAACA+CGG + chr1_4:3171445-3171464 Msa0143940:intron 40.0%
!!! CTAGCTTTTGGAGTGATACT+TGG + chr1_4:3171501-3171520 Msa0143940:intron 40.0%
!!! TTTTGGAGTGATACTTGGAG+AGG + chr1_4:3171506-3171525 Msa0143940:intron 40.0%
! TTTGGAGTGATACTTGGAGA+GGG + chr1_4:3171507-3171526 Msa0143940:intron 40.0%
GCATAGTGTGGAATCTTACT+TGG + chr1_4:3171624-3171643 Msa0143940:intron 40.0%
TGTGGAATCTTACTTGGAGA+AGG + chr1_4:3171630-3171649 Msa0143940:intron 40.0%
!!! GAGAAGGCACCTTTTTATGT+GGG + chr1_4:3171646-3171665 Msa0143940:intron 40.0%
AATCCTCCAAGAGGCTTAAA+AGG - chr1_4:3171682-3171701 None:intergenic 40.0%
ATGATCAAATGGATGGTTGG+TGG + chr1_4:3171720-3171739 Msa0143940:intron 40.0%
!! AGTGTGTTTTTGTGTGAGGT+GGG + chr1_4:3171800-3171819 Msa0143940:intron 40.0%
!! TGCCAACTTATGGAAGTGTT+TGG + chr1_4:3171850-3171869 Msa0143940:intron 40.0%
! CTAGCAAGATTGACTCTAGT+AGG - chr1_4:3171926-3171945 None:intergenic 40.0%
CTACTAGAGTCAATCTTGCT+AGG + chr1_4:3171924-3171943 Msa0143940:intron 40.0%
! ACACACATGGAGTTTGTTTC+CGG - chr1_4:3171965-3171984 None:intergenic 40.0%
CCTAGTACACAAAACACACA+TGG - chr1_4:3171978-3171997 None:intergenic 40.0%
! CCATGTGTGTTTTGTGTACT+AGG + chr1_4:3171975-3171994 Msa0143940:intron 40.0%
! TGTGTGTTTTGTGTACTAGG+TGG + chr1_4:3171978-3171997 Msa0143940:intron 40.0%
! GTGTGTTTTGTGTACTAGGT+GGG + chr1_4:3171979-3171998 Msa0143940:intron 40.0%
!! TCATTGTGAAGTGTCGAGTA+AGG + chr1_4:3172026-3172045 Msa0143940:intron 40.0%
AGGTGTGGCTTATGTTAATG+AGG + chr1_4:3172046-3172065 Msa0143940:intron 40.0%
TGTGGCTTATGTTAATGAGG+TGG + chr1_4:3172049-3172068 Msa0143940:intron 40.0%
TAGCTACTATTTGGACCTTG+TGG + chr1_4:3172177-3172196 Msa0143940:intron 40.0%
!!! AAGAGGTGAAAGTTTTGGCT+TGG + chr1_4:3172258-3172277 Msa0143940:intron 40.0%
! AATGGTGTTGGGATCCTATT+TGG + chr1_4:3172327-3172346 Msa0143940:intron 40.0%
GTCCTACACAAACACCAAAT+AGG - chr1_4:3172344-3172363 None:intergenic 40.0%
TACCTCTCAGCTGTGTTAAT+TGG + chr1_4:3172364-3172383 Msa0143940:intron 40.0%
TCAGCTGTGTTAATTGGAGA+GGG + chr1_4:3172370-3172389 Msa0143940:intron 40.0%
TGTGTTAATTGGAGAGGGTT+GGG + chr1_4:3172375-3172394 Msa0143940:intron 40.0%
!! TGTTCGAGTCATCGCTTTTA+TGG + chr1_4:3172782-3172801 Msa0143940:intron 40.0%
CAAGATGCACTAATAAGCTC+GGG - chr1_4:3172844-3172863 None:intergenic 40.0%
GCAAGATGCACTAATAAGCT+CGG - chr1_4:3172845-3172864 None:intergenic 40.0%
GCTTATTAGTGCATCTTGCA+CGG + chr1_4:3172846-3172865 Msa0143940:intron 40.0%
CTTATTAGTGCATCTTGCAC+GGG + chr1_4:3172847-3172866 Msa0143940:intron 40.0%
GATAAAACATGATCGTGTGC+GGG - chr1_4:3173276-3173295 None:intergenic 40.0%
CGATAAAACATGATCGTGTG+CGG - chr1_4:3173277-3173296 None:intergenic 40.0%
TCAATCCGTCCCAAAATACA+AGG - chr1_4:3173796-3173815 None:intergenic 40.0%
TCAAGCATCTTATAAGGGAG+GGG - chr1_4:3174215-3174234 None:intergenic 40.0%
!! TGAGCTTAGCTAAGTTGGTA+GGG - chr1_4:3174900-3174919 None:intergenic 40.0%
! ATAATAGGTGCCATATCAGC+AGG + chr1_4:3175130-3175149 Msa0143940:intron 40.0%
TTGTGACTATCCTGCTGATA+TGG - chr1_4:3175143-3175162 None:intergenic 40.0%
AATGTTGCAAATACACCTCC+TGG - chr1_4:3176053-3176072 None:intergenic 40.0%
GGTCAAAATGATCTTACTGC+TGG + chr1_4:3176122-3176141 Msa0143940:CDS 40.0%
AACGGGCACATAGCAAAAAT+GGG - chr1_4:3176238-3176257 None:intergenic 40.0%
AAACGGGCACATAGCAAAAA+TGG - chr1_4:3176239-3176258 None:intergenic 40.0%
!! ATTTTTGCTATGTGCCCGTT+TGG + chr1_4:3176238-3176257 Msa0143940:intron 40.0%
TCTCCTTGAACAACGTGTAT+AGG - chr1_4:3176533-3176552 None:intergenic 40.0%
AGCTAGGATTTGTAGCTTCA+TGG + chr1_4:3176574-3176593 Msa0143940:intron 40.0%
! GCTTCATGGAGAATTGCTTT+TGG + chr1_4:3176588-3176607 Msa0143940:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG + chr1_4:3176591-3176610 Msa0143940:intron 40.0%
CTAGCCAAAAACAACGTGTT+TGG - chr1_4:3176642-3176661 None:intergenic 40.0%
GTTGTGTATCCAAAATGACC+TGG - chr1_4:3176888-3176907 None:intergenic 40.0%
ATACACAACACTGGACCAAT+TGG + chr1_4:3176899-3176918 Msa0143940:CDS 40.0%
TGGCTATCCTTTATAGCAGA+TGG - chr1_4:3176953-3176972 None:intergenic 40.0%
TCTGCTATAAAGGATAGCCA+AGG + chr1_4:3176953-3176972 Msa0143940:CDS 40.0%
TGTATTGCTTTGCACAACCT+TGG - chr1_4:3176973-3176992 None:intergenic 40.0%
ACATATGTGATTGCAGCTAG+TGG - chr1_4:3177061-3177080 None:intergenic 40.0%
ATCCTCCCATTCCACTAAAT+AGG + chr1_4:3177478-3177497 Msa0143940:CDS 40.0%
TCCTCCCATTCCACTAAATA+GGG + chr1_4:3177479-3177498 Msa0143940:CDS 40.0%
CATGCCCTATTTAGTGGAAT+GGG - chr1_4:3177486-3177505 None:intergenic 40.0%
ACATGCCCTATTTAGTGGAA+TGG - chr1_4:3177487-3177506 None:intergenic 40.0%
TTGGAACAATCATGGAAGGT+AGG + chr1_4:3177664-3177683 Msa0143940:intron 40.0%
CTAGAAGTTGGCAAATATGC+GGG - chr1_4:3177690-3177709 None:intergenic 40.0%
GAAGGTGAGACCAAAATGAA+GGG + chr1_4:3177961-3177980 Msa0143940:intron 40.0%
!! CTTTGAAGCTCCATTCGATT+TGG - chr1_4:3178225-3178244 None:intergenic 40.0%
CGGTTCGACTAAAAATAGTC+TGG - chr1_4:3178637-3178656 None:intergenic 40.0%
AACACAACTGAGTTCGCAAA+AGG + chr1_4:3178894-3178913 Msa0143940:intron 40.0%
ATCAACTTTCCATTGACGGT+CGG - chr1_4:3179322-3179341 None:intergenic 40.0%
! TGCTGTTGACACATTAGCTT+TGG + chr1_4:3179545-3179564 Msa0143940:intron 40.0%
!! TTGACACATTAGCTTTGGCT+AGG + chr1_4:3179550-3179569 Msa0143940:intron 40.0%
! TTAACTGCCGAAGTTTTCCT+CGG - chr1_4:3179650-3179669 None:intergenic 40.0%
! AAACAGGTTTGAGGTTTCCT+CGG - chr1_4:3180436-3180455 None:intergenic 40.0%
! AAACAGGTTTGAGGTTTCCT+CGG + chr1_4:3180436-3180455 Msa0143940:intron 40.0%
! TTTACTGCCGAAGTTTTCCT+CGG + chr1_4:3180495-3180514 Msa0143940:intron 40.0%
!! CTGCAGCCGGTTTTATAATT+CGG + chr1_4:3180525-3180544 Msa0143940:intron 40.0%
!! TTGACACATTAGCTTTGGCT+AGG - chr1_4:3179550-3179569 None:intergenic 40.0%
! TGCTGTTGACACATTAGCTT+TGG - chr1_4:3179545-3179564 None:intergenic 40.0%
ATGAAGCACAAAGGAACCTA+TGG - chr1_4:3181046-3181065 None:intergenic 40.0%
AGCACAATCAAAGACACAAG+TGG - chr1_4:3181106-3181125 None:intergenic 40.0%
TATGTCTCTCCATATGGAGA+AGG - chr1_4:3181247-3181266 None:intergenic 40.0%
TCAACTGGAAGATACTCTGA+TGG + chr1_4:3181277-3181296 Msa0143940:CDS 40.0%
AAGTACTTGAGAGGTCTACT+TGG - chr1_4:3181436-3181455 None:intergenic 40.0%
GGATCTTCTAAGTACTTGAG+AGG - chr1_4:3181445-3181464 None:intergenic 40.0%
GTAATTTCAGCACAGAGCTT+TGG + chr1_4:3181597-3181616 Msa0143940:intron 40.0%
! TGGGTATTGTGAGTTGTCAT+TGG - chr1_4:3182403-3182422 None:intergenic 40.0%
! ATTTAGGGGCTAGGTCATTT+TGG + chr1_4:3182870-3182889 Msa0143940:CDS 40.0%
GGGAAATTAGCCAAAATCGT+AGG - chr1_4:3182926-3182945 None:intergenic 40.0%
GCCATATCTAGAGAAATAGG+AGG - chr1_4:3183571-3183590 None:intergenic 40.0%
!! ATACTCACTTGGGTTGGTAG+TGG + chr1_4:3170850-3170869 Msa0143940:intron 45.0%
TGACTTTAAATGGGAGACGG+CGG + chr1_4:3170923-3170942 Msa0143940:intron 45.0%
TCGAATGACCGACTAATCCT+AGG - chr1_4:3170957-3170976 None:intergenic 45.0%
!! GGATTAGTCGGTCATTCGAT+CGG + chr1_4:3170958-3170977 Msa0143940:intron 45.0%
TAGTTGGGTGAAATGGGAGA+CGG + chr1_4:3171187-3171206 Msa0143940:intron 45.0%
!! GCCTTTTAGCTAAATGGCGT+TGG + chr1_4:3171270-3171289 Msa0143940:intron 45.0%
! TAAATGGCGTTGGAGGTTGT+TGG + chr1_4:3171280-3171299 Msa0143940:intron 45.0%
CGTTATGGAAAGAGGCTTTG+AGG + chr1_4:3171315-3171334 Msa0143940:intron 45.0%
TAATGTGGGGTTGCCAAGAT+TGG + chr1_4:3171379-3171398 Msa0143940:intron 45.0%
!! TGCCAAGATTGGCTTCATCT+TGG + chr1_4:3171390-3171409 Msa0143940:intron 45.0%
CACCAAGATGAAGCCAATCT+TGG - chr1_4:3171395-3171414 None:intergenic 45.0%
!! CAAGATTGGCTTCATCTTGG+TGG + chr1_4:3171393-3171412 Msa0143940:intron 45.0%
! ATTGGCTTCATCTTGGTGGA+AGG + chr1_4:3171397-3171416 Msa0143940:intron 45.0%
ATCCGTAAGGTAGGAGACTT+TGG + chr1_4:3171422-3171441 Msa0143940:intron 45.0%
CACCAAAGTCTCCTACCTTA+CGG - chr1_4:3171427-3171446 None:intergenic 45.0%
!! GAGACTTTGGTGCTCCTAAT+TGG + chr1_4:3171435-3171454 Msa0143940:intron 45.0%
! TCCTAATTGGTTCAACACGG+AGG + chr1_4:3171448-3171467 Msa0143940:intron 45.0%
ACCTCCGTGTTGAACCAATT+AGG - chr1_4:3171452-3171471 None:intergenic 45.0%
! TAATTGGTTCAACACGGAGG+TGG + chr1_4:3171451-3171470 Msa0143940:intron 45.0%
TTGGAGTGATACTTGGAGAG+GGG + chr1_4:3171508-3171527 Msa0143940:intron 45.0%
GCTTCCGGAGTAAATATCCA+AGG + chr1_4:3171537-3171556 Msa0143940:intron 45.0%
TTCAACTCAAAAGGAGGCCT+TGG + chr1_4:3171571-3171590 Msa0143940:intron 45.0%
!!! GGAGAAGGCACCTTTTTATG+TGG + chr1_4:3171645-3171664 Msa0143940:intron 45.0%
! GCACCTTTTTATGTGGGAAG+AGG + chr1_4:3171652-3171671 Msa0143940:intron 45.0%
CCTCCTCTTCCCACATAAAA+AGG - chr1_4:3171658-3171677 None:intergenic 45.0%
! CCTTTTTATGTGGGAAGAGG+AGG + chr1_4:3171655-3171674 Msa0143940:intron 45.0%
AAGCCTCTTGGAGGATTTAG+AGG + chr1_4:3171685-3171704 Msa0143940:intron 45.0%
AGCCTCTTGGAGGATTTAGA+GGG + chr1_4:3171686-3171705 Msa0143940:intron 45.0%
!! ATCAAATGGATGGTTGGTGG+TGG + chr1_4:3171723-3171742 Msa0143940:intron 45.0%
! TGGTGGCGTTTAGAAGAGAA+AGG + chr1_4:3171740-3171759 Msa0143940:intron 45.0%
GGTGGCGTTTAGAAGAGAAA+GGG + chr1_4:3171741-3171760 Msa0143940:intron 45.0%
GTGGCGTTTAGAAGAGAAAG+GGG + chr1_4:3171742-3171761 Msa0143940:intron 45.0%
AGAAGAGAAAGGGGAGTTCT+CGG + chr1_4:3171751-3171770 Msa0143940:intron 45.0%
GAGGTCGGCCTATAATAAGT+TGG + chr1_4:3171775-3171794 Msa0143940:intron 45.0%
!! GGAGAGTGTGTTTTTGTGTG+AGG + chr1_4:3171796-3171815 Msa0143940:intron 45.0%
!! GAGTGTGTTTTTGTGTGAGG+TGG + chr1_4:3171799-3171818 Msa0143940:intron 45.0%
!! TGTTTTTGTGTGAGGTGGGT+TGG + chr1_4:3171804-3171823 Msa0143940:intron 45.0%
CGCCAAACACTTCCATAAGT+TGG - chr1_4:3171855-3171874 None:intergenic 45.0%
CTTGCTAGGCGTAATGTTCT+TGG + chr1_4:3171938-3171957 Msa0143940:intron 45.0%
! CACACATGGAGTTTGTTTCC+GGG - chr1_4:3171964-3171983 None:intergenic 45.0%
! TGTTTTGTGTACTAGGTGGG+AGG + chr1_4:3171982-3172001 Msa0143940:intron 45.0%
!! TTCATTGGGCTTGTTGGCTT+AGG + chr1_4:3172109-3172128 Msa0143940:intron 45.0%
!! TCATTGGGCTTGTTGGCTTA+GGG + chr1_4:3172110-3172129 Msa0143940:intron 45.0%
! TAATGGTACTAGCTCTCAGG+TGG + chr1_4:3172223-3172242 Msa0143940:intron 45.0%
AACTTTCACCTCTTCCACCA+CGG - chr1_4:3172252-3172271 None:intergenic 45.0%
! GGTGGAAGAGGTGAAAGTTT+TGG + chr1_4:3172253-3172272 Msa0143940:intron 45.0%
!!! AGGTGAAAGTTTTGGCTTGG+AGG + chr1_4:3172261-3172280 Msa0143940:intron 45.0%
!!! TGAAAGTTTTGGCTTGGAGG+TGG + chr1_4:3172264-3172283 Msa0143940:intron 45.0%
!!! GAAAGTTTTGGCTTGGAGGT+GGG + chr1_4:3172265-3172284 Msa0143940:intron 45.0%
CTCCAATTAACACAGCTGAG+AGG - chr1_4:3172369-3172388 None:intergenic 45.0%
CTCAGCTGTGTTAATTGGAG+AGG + chr1_4:3172369-3172388 Msa0143940:intron 45.0%
CTGTGTTAATTGGAGAGGGT+TGG + chr1_4:3172374-3172393 Msa0143940:intron 45.0%
!!! GGGTTGGGTTTTTTCTGTGT+TGG + chr1_4:3172390-3172409 Msa0143940:intron 45.0%
TGTGCTGGGAAATCTTGTAG+AGG + chr1_4:3172420-3172439 Msa0143940:intron 45.0%
CTGGGAAATCTTGTAGAGGT+AGG + chr1_4:3172424-3172443 Msa0143940:intron 45.0%
! TCTTGTAGAGGTAGGCCTTT+TGG + chr1_4:3172432-3172451 Msa0143940:intron 45.0%
CTCCACCAAAAAACCAGCAA+CGG - chr1_4:3172461-3172480 None:intergenic 45.0%
! GCTTTTGTGCTTCTGCAACA+TGG + chr1_4:3172561-3172580 Msa0143940:intron 45.0%
GTATGCTTGTCTTTAGCGCT+TGG + chr1_4:3172691-3172710 Msa0143940:intron 45.0%
GGGTGAGGATTGCATAAAAG+TGG - chr1_4:3173359-3173378 None:intergenic 45.0%
GATGCTCAGTGCAACAATTG+TGG - chr1_4:3173938-3173957 None:intergenic 45.0%
! TTCAAGCATCTTTGAGGGGA+GGG - chr1_4:3174842-3174861 None:intergenic 45.0%
! ATTCAAGCATCTTTGAGGGG+AGG - chr1_4:3174841-3174860 None:intergenic 45.0%
!! GTGAGCTTAGCTAAGTTGGT+AGG - chr1_4:3174901-3174920 None:intergenic 45.0%
CGTTGTGAGCTTAGCTAAGT+TGG - chr1_4:3174905-3174924 None:intergenic 45.0%
! AATTAGGGGCCAGGTCATTT+TGG + chr1_4:3176876-3176895 Msa0143940:CDS 45.0%
ATCCACACGAAGTTGAGCTA+GGG - chr1_4:3177035-3177054 None:intergenic 45.0%
AGGATTTGAGCTACCACATG+TGG + chr1_4:3177260-3177279 Msa0143940:intron 45.0%
GGATGGTACACATTACACAG+AGG + chr1_4:3177407-3177426 Msa0143940:CDS 45.0%
GCGTTACTGTTGAACCAAAG+TGG + chr1_4:3177762-3177781 Msa0143940:intron 45.0%
GGAAGGTGAGACCAAAATGA+AGG + chr1_4:3177960-3177979 Msa0143940:intron 45.0%
!! CCATTCGATTTGGCTAACAC+CGG - chr1_4:3178215-3178234 None:intergenic 45.0%
CCTGAACCATTAGGATGGTT+CGG + chr1_4:3179051-3179070 Msa0143940:intron 45.0%
!! ACCATTAGGATGGTTCGGTT+TGG + chr1_4:3179056-3179075 Msa0143940:intron 45.0%
ACCAAACCGAACCATCCTAA+TGG - chr1_4:3179060-3179079 None:intergenic 45.0%
AACAGGCGTATTACTCTCTC+TGG + chr1_4:3179141-3179160 Msa0143940:intron 45.0%
TCGGCAGTTAACTACCGAAA+GGG - chr1_4:3179601-3179620 None:intergenic 45.0%
TTCGGCAGTTAACTACCGAA+AGG - chr1_4:3180543-3180562 None:intergenic 45.0%
! CTGCAGCCGGTTTCATAATT+CGG - chr1_4:3179620-3179639 None:intergenic 45.0%
ATTCGGCAGTTAACTACCGA+AGG + chr1_4:3180542-3180561 Msa0143940:intron 45.0%
TTCGGCAGTTAACTACCGAA+GGG + chr1_4:3180543-3180562 Msa0143940:intron 45.0%
GCACCAAAGCTAAATATGGC+AGG - chr1_4:3181178-3181197 None:intergenic 45.0%
AAACGTTGACACTGGTGGTT+TGG + chr1_4:3181201-3181220 Msa0143940:CDS 45.0%
CTTGGGTCTAACTTCACACA+TGG + chr1_4:3181651-3181670 Msa0143940:CDS 45.0%
TGACAACTCACAATACCCAC+TGG + chr1_4:3182404-3182423 Msa0143940:intron 45.0%
GACAACTCACAATACCCACT+GGG + chr1_4:3182405-3182424 Msa0143940:intron 45.0%
TGGATTTCTACACTCCCAGT+GGG - chr1_4:3182422-3182441 None:intergenic 45.0%
CTACTGCCCACTTTAATGAG+TGG - chr1_4:3182720-3182739 None:intergenic 45.0%
! TGGTTGCACTCCTACGATTT+TGG + chr1_4:3182913-3182932 Msa0143940:CDS 45.0%
ATCGCTACGAAGTTGAGCTA+GGG - chr1_4:3183029-3183048 None:intergenic 45.0%
ACATATGCGATTGCAGCAAG+AGG - chr1_4:3183055-3183074 None:intergenic 45.0%
GTTAGCTGTCTCTGTGAAGT+GGG - chr1_4:3183506-3183525 None:intergenic 45.0%
TGTTAGCTGTCTCTGTGAAG+TGG - chr1_4:3183507-3183526 None:intergenic 45.0%
!!! ACATATTTTAATTTTATTTT+GGG + chr1_4:3174503-3174522 Msa0143940:intron 5.0%
!! TTTATTAATATATATAACAA+GGG - chr1_4:3176824-3176843 None:intergenic 5.0%
!!! TTTTATTAATATATATAACA+AGG - chr1_4:3176825-3176844 None:intergenic 5.0%
!! TAAAGAATTAAATTTAATTA+AGG - chr1_4:3180365-3180384 None:intergenic 5.0%
!!! TTAATTCTTTAATTATTTTA+TGG - chr1_4:3180356-3180375 None:intergenic 5.0%
!! TAAAGAATTAAATTTAATTA+AGG + chr1_4:3180365-3180384 Msa0143940:intron 5.0%
CTTGAGAGTAGCACGTTCCA+AGG - chr1_4:3170889-3170908 None:intergenic 50.0%
! CTTGGAACGTGCTACTCTCA+AGG + chr1_4:3170887-3170906 Msa0143940:intron 50.0%
TAAATGGGAGACGGCGGTAT+TGG + chr1_4:3170929-3170948 Msa0143940:intron 50.0%
TAATGGGGGTTTGGGTGTCA+AGG + chr1_4:3171226-3171245 Msa0143940:intron 50.0%
!! GAGGCTTTGAGGGCGAAATA+TGG + chr1_4:3171326-3171345 Msa0143940:intron 50.0%
GGCGAAATATGGCTCATGTG+TGG + chr1_4:3171337-3171356 Msa0143940:intron 50.0%
TTGGTGGAAGGAGATCCGTA+AGG + chr1_4:3171409-3171428 Msa0143940:intron 50.0%
TGGAAGGAGATCCGTAAGGT+AGG + chr1_4:3171413-3171432 Msa0143940:intron 50.0%
GTGGAACGCAAGGTAGGTAA+TGG + chr1_4:3171470-3171489 Msa0143940:intron 50.0%
TGGAGTGATACTTGGAGAGG+GGG + chr1_4:3171509-3171528 Msa0143940:intron 50.0%
AACTCAAAAGGAGGCCTTGG+TGG + chr1_4:3171574-3171593 Msa0143940:intron 50.0%
ACTCAAAAGGAGGCCTTGGT+GGG + chr1_4:3171575-3171594 Msa0143940:intron 50.0%
TCGTGGATCTTCGCATAGTG+TGG + chr1_4:3171612-3171631 Msa0143940:intron 50.0%
! GGAGGTCCTTTTAAGCCTCT+TGG + chr1_4:3171673-3171692 Msa0143940:intron 50.0%
! GGTCCTTTTAAGCCTCTTGG+AGG + chr1_4:3171676-3171695 Msa0143940:intron 50.0%
GCCTCTTGGAGGATTTAGAG+GGG + chr1_4:3171687-3171706 Msa0143940:intron 50.0%
TCCCCTCTAAATCCTCCAAG+AGG - chr1_4:3171691-3171710 None:intergenic 50.0%
TGGAGGATTTAGAGGGGATG+AGG + chr1_4:3171693-3171712 Msa0143940:intron 50.0%
! GAAGTGTTTGGCGCCTTCAA+AGG + chr1_4:3171862-3171881 Msa0143940:intron 50.0%
GTGAAAGCCACCACCTTTGA+AGG - chr1_4:3171878-3171897 None:intergenic 50.0%
! CAAAGGTGGTGGCTTTCACT+TGG + chr1_4:3171879-3171898 Msa0143940:intron 50.0%
TAGGCGTAATGTTCTTGGCC+CGG + chr1_4:3171943-3171962 Msa0143940:intron 50.0%
!! GTGAAGTGTCGAGTAAGGTG+TGG + chr1_4:3172031-3172050 Msa0143940:intron 50.0%
!! CATTGGGCTTGTTGGCTTAG+GGG + chr1_4:3172111-3172130 Msa0143940:intron 50.0%
!! ATTGGGCTTGTTGGCTTAGG+GGG + chr1_4:3172112-3172131 Msa0143940:intron 50.0%
GTTGGGTAGGATTCGCATTC+CGG + chr1_4:3172289-3172308 Msa0143940:intron 50.0%
!! TGTGTTGGTGCTGTTTGTGC+TGG + chr1_4:3172405-3172424 Msa0143940:intron 50.0%
!! GTGTTGGTGCTGTTTGTGCT+GGG + chr1_4:3172406-3172425 Msa0143940:intron 50.0%
AACCAGCAACGGACACCAAA+AGG - chr1_4:3172450-3172469 None:intergenic 50.0%
!!! GGTGTCCGTTGCTGGTTTTT+TGG + chr1_4:3172453-3172472 Msa0143940:intron 50.0%
!!! GTCCGTTGCTGGTTTTTTGG+TGG + chr1_4:3172456-3172475 Msa0143940:intron 50.0%
! AGCTGTCTAGACTGCGGTTT+TGG + chr1_4:3172479-3172498 Msa0143940:intron 50.0%
!! TGCGGCTGTTTCTGTTGGTT+GGG + chr1_4:3172533-3172552 Msa0143940:intron 50.0%
! TGTTTCTGTTGGTTGGGCAG+CGG + chr1_4:3172539-3172558 Msa0143940:intron 50.0%
!! TGAGTTGGTACCGGTGCATT+GGG + chr1_4:3172641-3172660 Msa0143940:intron 50.0%
! TGCATTGGGGGTTGGGTTTT+TGG + chr1_4:3172655-3172674 Msa0143940:intron 50.0%
!! ATTGGGGGTTGGGTTTTTGG+TGG + chr1_4:3172658-3172677 Msa0143940:intron 50.0%
GATGCACTAATAAGCTCGGG+TGG - chr1_4:3172841-3172860 None:intergenic 50.0%
GATGCACGGTGCAACAATTG+TGG - chr1_4:3173992-3174011 None:intergenic 50.0%
! TTTTGCTGGGGTTTGAACCC+CGG + chr1_4:3174070-3174089 Msa0143940:intron 50.0%
! TCAAGCATCTTTGAGGGGAG+GGG - chr1_4:3174125-3174144 None:intergenic 50.0%
GGTGCAAACTTTGCAACAGC+AGG + chr1_4:3175786-3175805 Msa0143940:CDS 50.0%
GATCCACACGAAGTTGAGCT+AGG - chr1_4:3177036-3177055 None:intergenic 50.0%
CTACCACATGTGGCATGTTG+TGG + chr1_4:3177270-3177289 Msa0143940:intron 50.0%
TAGCCACAACATGCCACATG+TGG - chr1_4:3177276-3177295 None:intergenic 50.0%
CATGTGGCATGTTGTGGCTA+TGG + chr1_4:3177276-3177295 Msa0143940:intron 50.0%
GCCCTATTTAGTGGAATGGG+AGG - chr1_4:3177483-3177502 None:intergenic 50.0%
TGGTTCAACAGTAACGCCCA+AGG - chr1_4:3177759-3177778 None:intergenic 50.0%
! CCGGTGTTAGCCAAATCGAA+TGG + chr1_4:3178212-3178231 Msa0143940:intron 50.0%
CACAGTTCCTTACGGTGTAC+CGG + chr1_4:3178376-3178395 Msa0143940:intron 50.0%
ACAGTTCCTTACGGTGTACC+GGG + chr1_4:3178377-3178396 Msa0143940:intron 50.0%
AAGAAACCCGGTACACCGTA+AGG - chr1_4:3178386-3178405 None:intergenic 50.0%
CCGAACCATCCTAATGGTTC+AGG - chr1_4:3179054-3179073 None:intergenic 50.0%
TCCAAAAATTGGACCAGCCC+AGG + chr1_4:3179085-3179104 Msa0143940:intron 50.0%
AATGAAAAGTAGGCCTGGGC+TGG - chr1_4:3179101-3179120 None:intergenic 50.0%
AAAGATGGACCGACCGTCAA+TGG + chr1_4:3179310-3179329 Msa0143940:intron 50.0%
CGGCAGTTAACTACCGAAAG+GGG - chr1_4:3179600-3179619 None:intergenic 50.0%
ACTTCGGCAGTTAACTGCTG+AGG + chr1_4:3179656-3179675 Msa0143940:intron 50.0%
ACTTCGGCAATTAACTGCCG+AGG + chr1_4:3179689-3179708 Msa0143940:intron 50.0%
ACTTCGGCAATTAACTGCCG+AGG - chr1_4:3179689-3179708 None:intergenic 50.0%
ACTTCGGCAGTAAACTACCG+AGG - chr1_4:3180489-3180508 None:intergenic 50.0%
TCGGCAGTTAACTACCGAAG+GGG + chr1_4:3180544-3180563 Msa0143940:intron 50.0%
GGCACGCTTGATACACATCA+TGG + chr1_4:3180739-3180758 Msa0143940:intron 50.0%
GGTGCTTCAAACGTTGACAC+TGG + chr1_4:3181193-3181212 Msa0143940:CDS 50.0%
GCTTCAAACGTTGACACTGG+TGG + chr1_4:3181196-3181215 Msa0143940:CDS 50.0%
TGGAGAAGGTGGTGCTTGAA+AGG - chr1_4:3181233-3181252 None:intergenic 50.0%
CAAGCACCACCTTCTCCATA+TGG + chr1_4:3181235-3181254 Msa0143940:CDS 50.0%
GTCTCTCCATATGGAGAAGG+TGG - chr1_4:3181244-3181263 None:intergenic 50.0%
CATGGTGCAAACTTCGCAAC+AGG + chr1_4:3181669-3181688 Msa0143940:CDS 50.0%
GTGGATTTCTACACTCCCAG+TGG - chr1_4:3182423-3182442 None:intergenic 50.0%
ATACACAACACAGGGCCAAG+TGG + chr1_4:3182893-3182912 Msa0143940:CDS 50.0%
! ATCGTAGGAGTGCAACCACT+TGG - chr1_4:3182911-3182930 None:intergenic 50.0%
GATCGCTACGAAGTTGAGCT+AGG - chr1_4:3183030-3183049 None:intergenic 50.0%
AGGATTTGAGCTTCCACACG+TGG + chr1_4:3183354-3183373 Msa0143940:intron 50.0%
!! ACTTGGGTTGGTAGTGGCGT+TGG + chr1_4:3170856-3170875 Msa0143940:intron 55.0%
!! GTGGCGTTGGCTTGATACCT+TGG + chr1_4:3170869-3170888 Msa0143940:intron 55.0%
! AGACGGCGGTATTGGAACCT+AGG + chr1_4:3170937-3170956 Msa0143940:intron 55.0%
! ATGGCGTTGGAGGTTGTTGG+AGG + chr1_4:3171283-3171302 Msa0143940:intron 55.0%
CGTTGGAGGTTGTTGGAGGA+GGG + chr1_4:3171287-3171306 Msa0143940:intron 55.0%
GAGGTTGTTGGAGGAGGGTA+CGG + chr1_4:3171292-3171311 Msa0143940:intron 55.0%
GGGTACGGCGTTATGGAAAG+AGG + chr1_4:3171307-3171326 Msa0143940:intron 55.0%
CTCAAAAGGAGGCCTTGGTG+GGG + chr1_4:3171576-3171595 Msa0143940:intron 55.0%
TCAAAAGGAGGCCTTGGTGG+GGG + chr1_4:3171577-3171596 Msa0143940:intron 55.0%
AGAAAGGGGAGTTCTCGGTG+AGG + chr1_4:3171756-3171775 Msa0143940:intron 55.0%
GGTTGGAGTGAGGAGGAGAA+AGG + chr1_4:3171821-3171840 Msa0143940:intron 55.0%
GTGTTTGGCGCCTTCAAAGG+TGG + chr1_4:3171865-3171884 Msa0143940:intron 55.0%
TTTGGCGCCTTCAAAGGTGG+TGG + chr1_4:3171868-3171887 Msa0143940:intron 55.0%
! GGTGGTGGCTTTCACTTGGA+AGG + chr1_4:3171883-3171902 Msa0143940:intron 55.0%
!! GCTTGTTGGCTTAGGGGGAA+AGG + chr1_4:3172117-3172136 Msa0143940:intron 55.0%
!! TTTGGCTTGGAGGTGGGTGT+TGG + chr1_4:3172271-3172290 Msa0143940:intron 55.0%
!! TTGGCTTGGAGGTGGGTGTT+GGG + chr1_4:3172272-3172291 Msa0143940:intron 55.0%
TGGTGGAGCTGTCTAGACTG+CGG + chr1_4:3172473-3172492 Msa0143940:intron 55.0%
TCTGTTCCTGTTGCCTGCTG+CGG + chr1_4:3172515-3172534 Msa0143940:intron 55.0%
!! CTGCGGCTGTTTCTGTTGGT+TGG + chr1_4:3172532-3172551 Msa0143940:intron 55.0%
CAGCAGCCTGTGCTCTTTCT+GGG + chr1_4:3172586-3172605 Msa0143940:intron 55.0%
!! CTGAGTTGGTACCGGTGCAT+TGG + chr1_4:3172640-3172659 Msa0143940:intron 55.0%
!! GAGTTGGTACCGGTGCATTG+GGG + chr1_4:3172642-3172661 Msa0143940:intron 55.0%
!! AGTTGGTACCGGTGCATTGG+GGG + chr1_4:3172643-3172662 Msa0143940:intron 55.0%
AAACCCAACCCCCAATGCAC+CGG - chr1_4:3172654-3172673 None:intergenic 55.0%
AGCCCTAGCTCAACTTCGTG+TGG + chr1_4:3177030-3177049 Msa0143940:CDS 55.0%
GTGGCATGTTGTGGCTATGG+AGG + chr1_4:3177279-3177298 Msa0143940:intron 55.0%
!!! GCCTGGGCTGGTCCAATTTT+TGG - chr1_4:3179089-3179108 None:intergenic 55.0%
CCTCGGTAGTTAACTGCAGC+CGG - chr1_4:3180512-3180531 None:intergenic 55.0%
CCTCGGTAGTTAACTGCAGC+CGG + chr1_4:3180512-3180531 Msa0143940:intron 55.0%
GGTGCAAACTTCGCAACAGG+AGG + chr1_4:3181672-3181691 Msa0143940:CDS 55.0%
CTTCCACACGTGGCATGTTG+TGG + chr1_4:3183364-3183383 Msa0143940:CDS 55.0%
TAGCCACAACATGCCACGTG+TGG - chr1_4:3183370-3183389 None:intergenic 55.0%
CACGTGGCATGTTGTGGCTA+TGG + chr1_4:3183370-3183389 Msa0143940:CDS 55.0%
GTGGCATGTTGTGGCTATGG+AGG + chr1_4:3177279-3177298 Msa0143940:intron 55.0%
GCGTTGGAGGTTGTTGGAGG+AGG + chr1_4:3171286-3171305 Msa0143940:intron 60.0%
! TGGAGGAGGGTACGGCGTTA+TGG + chr1_4:3171300-3171319 Msa0143940:intron 60.0%
CAACACGGAGGTGGAACGCA+AGG + chr1_4:3171460-3171479 Msa0143940:intron 60.0%
ACGGAGGTGGAACGCAAGGT+AGG + chr1_4:3171464-3171483 Msa0143940:intron 60.0%
!! GGAGAGGGGGTACTTGCTTC+CGG + chr1_4:3171522-3171541 Msa0143940:intron 60.0%
AGGGGAGTTCTCGGTGAGGT+CGG + chr1_4:3171760-3171779 Msa0143940:intron 60.0%
!! GTGTGAGGTGGGTTGGAGTG+AGG + chr1_4:3171811-3171830 Msa0143940:intron 60.0%
!! TGAGGTGGGTTGGAGTGAGG+AGG + chr1_4:3171814-3171833 Msa0143940:intron 60.0%
!! CTTGGAGGTGGGTGTTGGGT+AGG + chr1_4:3172276-3172295 Msa0143940:intron 60.0%
!!! GGCCTTTTGGTGTCCGTTGC+TGG + chr1_4:3172445-3172464 Msa0143940:intron 60.0%
AAACAGCCGCAGCAGGCAAC+AGG - chr1_4:3172524-3172543 None:intergenic 60.0%
CCAACAGAAACAGCCGCAGC+AGG - chr1_4:3172531-3172550 None:intergenic 60.0%
!! CCTGCTGCGGCTGTTTCTGT+TGG + chr1_4:3172528-3172547 Msa0143940:intron 60.0%
GCAGCAGCCTGTGCTCTTTC+TGG + chr1_4:3172585-3172604 Msa0143940:intron 60.0%
CCTGTGCTCTTTCTGGGCTG+CGG + chr1_4:3172592-3172611 Msa0143940:intron 60.0%
CTGTGCTCTTTCTGGGCTGC+GGG + chr1_4:3172593-3172612 Msa0143940:intron 60.0%
GGGTGCTTCTGTTTGGCTGC+AGG + chr1_4:3172613-3172632 Msa0143940:intron 60.0%
!! CAGGCCAGCTGAGTTGGTAC+CGG + chr1_4:3172632-3172651 Msa0143940:intron 60.0%
! TGCACCGGTACCAACTCAGC+TGG - chr1_4:3172639-3172658 None:intergenic 60.0%
! GTACCGGTGCATTGGGGGTT+GGG + chr1_4:3172648-3172667 Msa0143940:intron 60.0%
TGCATCTTGCACGGGCTCGT+TGG + chr1_4:3172855-3172874 Msa0143940:intron 60.0%
CCGGCTGCAGTTAACTACCG+AGG + chr1_4:3179630-3179649 Msa0143940:intron 60.0%
CCGGCTGCAGTTAACTACCG+AGG - chr1_4:3179630-3179649 None:intergenic 60.0%
AAAGGAGGCCTTGGTGGGGG+AGG + chr1_4:3171580-3171599 Msa0143940:intron 65.0%
TAGCTCTCAGGTGGACGCCG+TGG + chr1_4:3172232-3172251 Msa0143940:intron 65.0%
! CCGCAGCCCAGAAAGAGCAC+AGG - chr1_4:3172595-3172614 None:intergenic 65.0%
GGGCTGCGGGTGCTTCTGTT+TGG + chr1_4:3172606-3172625 Msa0143940:intron 65.0%
TGGCTGCAGGCCAGCTGAGT+TGG + chr1_4:3172626-3172645 Msa0143940:intron 65.0%
!! GGTACCGGTGCATTGGGGGT+TGG + chr1_4:3172647-3172666 Msa0143940:intron 65.0%
GAGGCCTTGGTGGGGGAGGT+GGG + chr1_4:3171584-3171603 Msa0143940:intron 70.0%
AGGCCTTGGTGGGGGAGGTG+GGG + chr1_4:3171585-3171604 Msa0143940:intron 70.0%
CTCTCAGGTGGACGCCGTGG+TGG + chr1_4:3172235-3172254 Msa0143940:intron 70.0%
! GGTGGACGCCGTGGTGGAAG+AGG + chr1_4:3172241-3172260 Msa0143940:intron 70.0%
GGAGGCCTTGGTGGGGGAGG+TGG + chr1_4:3171583-3171602 Msa0143940:intron 75.0%
GGCCTTGGTGGGGGAGGTGG+GGG + chr1_4:3171586-3171605 Msa0143940:intron 75.0%
CTCCCCCACCTCCCCCACCA+AGG - chr1_4:3171591-3171610 None:intergenic 75.0%
CTTGGTGGGGGAGGTGGGGG+AGG + chr1_4:3171589-3171608 Msa0143940:intron 75.0%
! GGGGGAGGTGGGGGAGGTCG+TGG + chr1_4:3171595-3171614 Msa0143940:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 3170734 3183606 3170734 ID=Msa0143940;Name=Msa0143940
chr1_4 mRNA 3170734 3183606 3170734 ID=Msa0143940-mRNA-1;Parent=Msa0143940;Name=Msa0143940-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.44|0.2|0.9|0.77|0.6|10|0|613
chr1_4 exon 3170734 3170740 3170734 ID=Msa0143940-mRNA-1:exon:1322;Parent=Msa0143940-mRNA-1
chr1_4 exon 3175721 3175930 3175721 ID=Msa0143940-mRNA-1:exon:1323;Parent=Msa0143940-mRNA-1
chr1_4 exon 3176054 3176196 3176054 ID=Msa0143940-mRNA-1:exon:1324;Parent=Msa0143940-mRNA-1
chr1_4 exon 3176866 3177098 3176866 ID=Msa0143940-mRNA-1:exon:1325;Parent=Msa0143940-mRNA-1
chr1_4 exon 3177329 3177514 3177329 ID=Msa0143940-mRNA-1:exon:1326;Parent=Msa0143940-mRNA-1
chr1_4 exon 3181096 3181322 3181096 ID=Msa0143940-mRNA-1:exon:1327;Parent=Msa0143940-mRNA-1
chr1_4 exon 3181607 3181816 3181607 ID=Msa0143940-mRNA-1:exon:1328;Parent=Msa0143940-mRNA-1
chr1_4 exon 3181931 3182100 3181931 ID=Msa0143940-mRNA-1:exon:1329;Parent=Msa0143940-mRNA-1
chr1_4 exon 3182860 3183072 3182860 ID=Msa0143940-mRNA-1:exon:1330;Parent=Msa0143940-mRNA-1
chr1_4 exon 3183364 3183606 3183364 ID=Msa0143940-mRNA-1:exon:1331;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3170734 3170740 3170734 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3175721 3175930 3175721 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3176054 3176196 3176054 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3176866 3177098 3176866 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3177329 3177514 3177329 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3181096 3181322 3181096 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3181607 3181816 3181607 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3181931 3182100 3181931 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3182860 3183072 3182860 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
chr1_4 CDS 3183364 3183606 3183364 ID=Msa0143940-mRNA-1:cds;Parent=Msa0143940-mRNA-1
Gene Sequence

>Msa0143940

ATGTCAACACAAAGCTTTCGACTTCCCTATCTAAGTCCATATCTTAATTCTCTTGGGTCAAATTTTACACATGGTGCAAACTTTGCAACAGCAGGATCAACAATCAAAATTCCTAACAACATTATACCTAATGGAATGTTCAGTCCATTTTCCCTTCAGATTCAGTACATTCAATTCAAAGATTTCATACCCAAAACAAAGTTTATTAGGGATCAAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTATTCCAAAGCCTTATACACATTTGATATAGGTCAAAATGATCTTACTGCTGGATTTTTCGGTAATAAGACTATACAACAAGTCAACGCTACTGTGCCCGATATAAATATATACAAATTAGGGGCCAGGTCATTTTGGATACACAACACTGGACCAATTGGATGTGTGCCTTTAATTTTGGCCAATTTTCCATCTGCTATAAAGGATAGCCAAGGTTGTGCAAAGCAATACAATGAAGTATCTCAATATTTTAATTTAAAGTTGAAGGAAGCCCTAGCTCAACTTCGTGTGGATCTTCCACTAGCTGCAATCACATATGTTGATATCTACTCTCCTAAATGTGGAGAAATCATAAACATAAATGGTACAAACATTGTTGTTGGTTCATGTAAAAAACCATCTACTAGAATAATATGGGATGGTACACATTACACAGAGGCAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGAAGCTTTTACAAATCCTCCCATTCCACTAAATAGGGCATGTTACAAAAAGCACATGCCACTTGTGTCTTTGATTGTGCTTATTTTATGTTCTACACCCCCAATATTTGCTACAAAGAATTGTGATTTTCCTGCCATATTTAGCTTTGGTGCTTCAAACGTTGACACTGGTGGTTTGGCTGCTGCCTTTCAAGCACCACCTTCTCCATATGGAGAGACATATTTTCATAGATCAACTGGAAGATACTCTGATGGTCGAATCATTATTGATTTCATAGCACAGAGCTTTGGACTTCCCTATCTAAGTCCATATCTTAATTCTCTTGGGTCTAACTTCACACATGGTGCAAACTTCGCAACAGGAGGATCAACAATCAATATTCCTAATAGTATTATACCTAATGGGATATTTAGTCCATTTTCTCTTCAAATTCAGTACATTCAATTCAAAGATTTCATATCCAAAACAAATCTCATTAGAGATAAAGGAGGTGTATTTGCAACGTTGATCCCCAAAGAAGACTATTTTTCCAACGCCTTATACACATTTGATATTGGTCAAAATGATCTTATTGGTGGTTATTTTGGTAATGCGACTATAAAACAAGTCAATGCTACTGTACCCGATATAGTAAACAATTTCATAGAGAGTATCAAGAATATATACAATTTAGGGGCTAGGTCATTTTGGATACACAACACAGGGCCAAGTGGTTGCACTCCTACGATTTTGGCTAATTTCCCATCTGCAATAAAGGATAGTTATGGTTGTGCAAAGCAACACAATGAAGTATCTCAGTATTTTAATTTAAAGTTGAAGGAAGCCCTAGCTCAACTTCGTAGCGATCTTCCTCTTGCTGCAATCGCATATCTTCCACACGTGGCATGTTGTGGCTATGGAGGAAAGTACAACATTCATGTTGGATGTGGAGCAACTATAAACATAAATGGTACAAAAATTGTTGCGGGTTCATGTAAAAACCCATCTACTAGAATCATTTGGGATGGTTCCCACTTCACAGAGACAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGGAGCTTTCAATGATCCTCCTATTTCTCTAGATATGGCATGTTATAGAAAGTGA
Protein sequence

>Msa0143940

MSTQSFRLPYLSPYLNSLGSNFTHGANFATAGSTIKIPNNIIPNGMFSPFSLQIQYIQFKDFIPKTKFIRDQGGVFATLIPKEDYYSKALYTFDIGQNDLTAGFFGNKTIQQVNATVPDINIYKLGARSFWIHNTGPIGCVPLILANFPSAIKDSQGCAKQYNEVSQYFNLKLKEALAQLRVDLPLAAITYVDIYSPKCGEIININGTNIVVGSCKKPSTRIIWDGTHYTEAANKIVFDQISTEAFTNPPIPLNRACYKKHMPLVSLIVLILCSTPPIFATKNCDFPAIFSFGASNVDTGGLAAAFQAPPSPYGETYFHRSTGRYSDGRIIIDFIAQSFGLPYLSPYLNSLGSNFTHGANFATGGSTINIPNSIIPNGIFSPFSLQIQYIQFKDFISKTNLIRDKGGVFATLIPKEDYFSNALYTFDIGQNDLIGGYFGNATIKQVNATVPDIVNNFIESIKNIYNLGARSFWIHNTGPSGCTPTILANFPSAIKDSYGCAKQHNEVSQYFNLKLKEALAQLRSDLPLAAIAYLPHVACCGYGGKYNIHVGCGATININGTKIVAGSCKNPSTRIIWDGSHFTETANKIVFDQISTGAFNDPPISLDMACYRK*