AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0060380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060380 MtrunA17_Chr1g0160011 88.172 372 23 2 215 565 11 382 0.0 657
Msa0060380 MtrunA17_Chr1g0160011 73.413 252 27 2 1 212 131 382 6.16e-120 359
Msa0060380 MtrunA17_Chr1g0160031 81.283 374 50 1 215 568 11 384 0.0 622
Msa0060380 MtrunA17_Chr1g0160031 70.079 254 36 2 2 215 131 384 2.13e-114 345
Msa0060380 MtrunA17_Chr1g0159991 78.836 378 58 2 213 568 6 383 0.0 597
Msa0060380 MtrunA17_Chr1g0159991 78.599 257 13 2 1 215 127 383 5.48e-132 390
Msa0060380 MtrunA17_Chr1g0159981 73.657 391 75 3 206 568 3 393 0.0 567
Msa0060380 MtrunA17_Chr1g0159981 75.486 257 21 2 1 215 137 393 1.24e-129 384
Msa0060380 MtrunA17_Chr1g0159971 63.243 370 112 3 222 567 24 393 1.08e-167 481
Msa0060380 MtrunA17_Chr1g0159971 60.784 255 58 2 2 214 139 393 1.01e-102 315
Msa0060380 MtrunA17_Chr1g0160101 56.878 378 138 4 214 567 13 389 7.60e-146 426
Msa0060380 MtrunA17_Chr1g0160101 55.118 254 72 2 3 214 136 389 1.38e-86 273
Msa0060380 MtrunA17_Chr7g0254461 52.800 375 151 5 219 567 19 393 5.50e-135 398
Msa0060380 MtrunA17_Chr7g0254461 48.450 258 88 4 2 214 136 393 9.79e-75 243
Msa0060380 MtrunA17_Chr8g0381581 51.902 368 152 5 219 561 16 383 2.25e-129 384
Msa0060380 MtrunA17_Chr8g0381581 46.032 252 91 4 2 208 132 383 3.16e-69 228
Msa0060380 MtrunA17_Chr7g0226941 46.089 358 166 5 235 567 25 380 6.05e-102 313
Msa0060380 MtrunA17_Chr7g0226941 40.625 256 107 5 3 214 126 380 1.78e-53 186
Msa0060380 MtrunA17_Chr6g0450701 42.659 361 168 8 233 565 29 378 7.71e-87 274
Msa0060380 MtrunA17_Chr6g0450701 36.965 257 114 6 2 212 124 378 2.44e-41 153
Msa0060380 MtrunA17_Chr7g0273101 43.767 361 168 10 232 563 18 372 1.24e-84 268
Msa0060380 MtrunA17_Chr7g0273101 36.800 250 109 6 4 206 121 368 1.92e-39 148
Msa0060380 MtrunA17_Chr7g0226931 39.075 389 188 8 223 565 13 398 3.72e-81 259
Msa0060380 MtrunA17_Chr7g0226931 31.868 273 127 6 3 216 130 402 3.70e-37 142
Msa0060380 MtrunA17_Chr7g0275291 39.211 380 195 8 214 565 4 375 6.28e-81 258
Msa0060380 MtrunA17_Chr7g0275291 32.812 256 120 6 3 212 126 375 1.45e-32 129
Msa0060380 MtrunA17_Chr7g0226911 37.008 381 203 8 219 565 7 384 2.89e-80 257
Msa0060380 MtrunA17_Chr7g0226911 32.319 263 128 6 3 216 127 388 1.93e-37 142
Msa0060380 MtrunA17_Chr6g0450711 40.669 359 174 8 236 566 115 462 6.12e-76 248
Msa0060380 MtrunA17_Chr6g0450711 36.434 258 116 6 2 213 207 462 2.65e-40 152
Msa0060380 MtrunA17_Chr1g0191461 39.084 371 190 10 219 560 7 370 2.00e-74 241
Msa0060380 MtrunA17_Chr1g0191461 34.000 250 117 5 3 206 122 369 2.63e-34 133
Msa0060380 MtrunA17_Chr8g0352901 39.005 382 187 10 217 565 4 372 5.74e-74 240
Msa0060380 MtrunA17_Chr8g0352901 36.328 256 114 6 6 212 117 372 9.66e-40 149
Msa0060380 MtrunA17_Chr6g0450731 39.216 357 173 9 235 566 25 362 6.28e-74 239
Msa0060380 MtrunA17_Chr6g0450731 34.959 246 125 6 2 213 118 362 9.91e-42 154
Msa0060380 MtrunA17_Chr8g0347751 38.997 359 179 7 239 565 32 382 7.51e-74 240
Msa0060380 MtrunA17_Chr8g0347751 29.924 264 123 7 2 212 128 382 2.01e-26 111
Msa0060380 MtrunA17_Chr6g0450721 37.097 372 200 8 217 566 1 360 5.25e-72 234
Msa0060380 MtrunA17_Chr6g0450721 35.950 242 120 5 5 213 121 360 1.25e-40 150
Msa0060380 MtrunA17_Chr7g0271551 36.676 349 177 9 243 566 36 365 8.75e-66 218
Msa0060380 MtrunA17_Chr7g0271551 32.653 245 127 4 4 213 124 365 8.17e-33 129
Msa0060380 MtrunA17_Chr8g0339251 37.059 340 168 10 217 530 4 323 1.14e-54 188
Msa0060380 MtrunA17_Chr8g0339251 37.931 174 86 4 7 166 118 283 1.38e-24 105
Msa0060380 MtrunA17_Chr2g0283481 34.574 376 189 14 223 560 27 383 6.83e-45 163
Msa0060380 MtrunA17_Chr2g0283481 28.947 228 117 8 5 196 154 372 6.55e-15 77.0
Msa0060380 MtrunA17_Chr2g0283531 33.708 356 181 12 241 559 29 366 3.86e-41 152
Msa0060380 MtrunA17_Chr2g0283501 31.892 370 195 13 231 561 18 369 1.02e-39 149
Msa0060380 MtrunA17_Chr3g0104821 32.123 358 185 13 241 559 42 380 1.15e-39 149
Msa0060380 MtrunA17_Chr2g0317261 31.921 354 176 12 241 559 28 351 1.82e-39 147
Msa0060380 MtrunA17_Chr2g0317261 28.889 225 106 9 27 206 136 351 8.48e-14 73.2
Msa0060380 MtrunA17_Chr2g0317271 31.921 354 176 12 241 559 28 351 1.98e-39 147
Msa0060380 MtrunA17_Chr2g0317271 29.279 222 109 9 27 206 136 351 1.46e-13 72.4
Msa0060380 MtrunA17_Chr0c01g0489571 31.356 354 178 12 241 559 28 351 1.46e-38 145
Msa0060380 MtrunA17_Chr0c01g0489571 27.928 222 112 9 27 206 136 351 3.34e-12 68.2
Msa0060380 MtrunA17_Chr0c01g0489581 31.356 354 178 12 241 559 28 351 1.58e-38 145
Msa0060380 MtrunA17_Chr0c01g0489581 27.928 222 112 9 27 206 136 351 3.40e-12 68.2
Msa0060380 MtrunA17_Chr2g0283511 30.460 348 193 10 248 560 36 369 3.40e-36 139
Msa0060380 MtrunA17_Chr2g0283511 28.866 194 102 5 49 206 175 368 3.71e-16 80.5
Msa0060380 MtrunA17_Chr3g0112821 32.958 355 178 14 241 559 28 358 9.90e-36 137
Msa0060380 MtrunA17_Chr4g0057991 29.443 377 208 11 221 561 17 371 1.80e-35 137
Msa0060380 MtrunA17_Chr4g0057991 25.600 250 139 9 3 216 141 379 2.12e-11 65.9
Msa0060380 MtrunA17_Chr2g0301581 31.129 363 206 13 222 559 10 353 7.06e-35 135
Msa0060380 MtrunA17_Chr2g0301581 29.461 241 113 10 3 206 133 353 2.62e-11 65.5
Msa0060380 MtrunA17_Chr3g0093031 32.222 360 179 14 241 559 28 363 7.60e-34 132
Msa0060380 MtrunA17_Chr2g0301541 30.854 363 207 13 222 559 10 353 1.21e-33 131
Msa0060380 MtrunA17_Chr3g0096551 31.707 369 181 14 241 559 27 374 1.42e-33 132
Msa0060380 MtrunA17_Chr3g0112691 30.682 352 193 10 241 559 28 361 8.97e-33 129
Msa0060380 MtrunA17_Chr8g0344941 30.245 367 190 14 220 549 18 355 6.22e-30 121
Msa0060380 MtrunA17_Chr2g0330781 31.138 334 186 14 242 549 30 345 1.47e-29 119
Msa0060380 MtrunA17_Chr2g0330781 25.424 236 125 8 4 202 130 351 6.65e-12 67.4
Msa0060380 MtrunA17_Chr8g0349321 30.060 336 186 10 243 552 37 349 2.75e-29 119
Msa0060380 MtrunA17_Chr4g0027521 31.065 338 193 14 242 554 26 348 2.46e-27 113
Msa0060380 MtrunA17_Chr4g0027521 26.695 236 128 8 2 201 122 348 2.71e-12 68.6
Msa0060380 MtrunA17_Chr8g0341001 30.120 332 192 13 242 549 31 346 2.93e-27 113
Msa0060380 MtrunA17_Chr8g0341001 25.877 228 122 8 4 196 131 346 4.84e-12 67.8
Msa0060380 MtrunA17_Chr8g0349341 28.358 335 193 10 243 552 37 349 3.34e-27 113
Msa0060380 MtrunA17_Chr5g0438631 29.429 350 203 15 223 545 6 338 1.29e-26 111
Msa0060380 MtrunA17_Chr5g0396511 31.287 342 174 15 245 552 48 362 4.75e-26 110
Msa0060380 MtrunA17_Chr2g0301591 31.338 284 157 8 222 491 10 269 4.83e-26 108
Msa0060380 MtrunA17_Chr7g0274991 31.232 349 171 16 243 553 33 350 1.24e-25 108
Msa0060380 MtrunA17_Chr5g0432101 27.401 354 210 15 222 545 8 344 6.13e-25 106
Msa0060380 MtrunA17_Chr5g0432101 26.230 244 130 8 5 212 133 362 2.57e-12 68.6
Msa0060380 MtrunA17_Chr5g0438621 27.841 352 202 15 219 544 13 338 8.48e-25 105
Msa0060380 MtrunA17_Chr7g0275011 30.460 348 173 14 243 552 34 350 8.65e-25 106
Msa0060380 MtrunA17_Chr2g0294311 28.173 394 205 17 206 556 3 361 9.07e-25 106
Msa0060380 MtrunA17_Chr4g0068441 28.448 348 195 12 240 556 32 356 1.22e-24 105
Msa0060380 MtrunA17_Chr8g0374101 28.134 359 193 15 233 552 28 360 3.11e-24 104
Msa0060380 MtrunA17_Chr2g0294301 28.324 346 192 13 243 556 35 356 3.81e-24 104
Msa0060380 MtrunA17_Chr1g0156911 28.691 359 208 14 218 545 4 345 4.65e-24 103
Msa0060380 MtrunA17_Chr1g0182811 30.458 371 193 16 217 552 11 351 7.30e-24 103
Msa0060380 MtrunA17_Chr6g0457921 29.459 370 210 18 219 557 4 353 9.48e-24 103
Msa0060380 MtrunA17_Chr2g0301641 29.179 329 178 11 243 539 43 348 1.21e-23 103
Msa0060380 MtrunA17_Chr7g0275001 29.971 347 179 14 243 553 25 343 1.28e-23 102
Msa0060380 MtrunA17_Chr8g0371481 26.781 351 189 16 237 549 35 355 8.82e-23 100
Msa0060380 MtrunA17_Chr3g0120861 28.070 342 205 16 237 554 32 356 1.46e-22 99.8
Msa0060380 MtrunA17_Chr1g0156891 28.889 360 214 14 222 556 21 363 1.54e-22 99.8
Msa0060380 MtrunA17_Chr1g0156891 26.126 222 119 6 3 190 140 350 1.15e-11 66.6
Msa0060380 MtrunA17_Chr5g0438641 28.650 363 195 17 219 545 7 341 1.94e-22 99.0
Msa0060380 MtrunA17_Chr2g0320671 27.811 338 191 12 242 549 29 343 2.35e-22 99.0
Msa0060380 MtrunA17_Chr1g0189891 28.863 343 182 15 243 553 29 341 2.79e-22 98.6
Msa0060380 MtrunA17_Chr8g0380041 24.409 381 234 11 213 564 3 358 4.55e-22 98.2
Msa0060380 MtrunA17_Chr4g0008851 27.249 378 205 16 214 552 4 350 8.75e-22 97.4
Msa0060380 MtrunA17_Chr8g0349301 30.034 293 159 11 243 509 37 309 1.04e-21 96.3
Msa0060380 MtrunA17_Chr3g0086641 27.049 366 204 14 214 545 10 346 1.10e-21 97.1
Msa0060380 MtrunA17_Chr3g0099151 28.940 349 182 13 242 552 86 406 1.13e-21 97.8
Msa0060380 MtrunA17_Chr3g0131321 25.269 372 218 11 220 558 11 355 1.63e-21 96.7
Msa0060380 MtrunA17_Chr8g0344931 29.586 338 181 9 243 552 37 345 1.70e-21 96.3
Msa0060380 MtrunA17_Chr1g0156921 27.298 359 212 14 213 543 12 349 1.93e-21 96.3
Msa0060380 MtrunA17_Chr8g0349331 27.195 353 176 11 222 545 10 310 2.33e-21 95.5
Msa0060380 MtrunA17_Chr1g0156901 27.190 331 197 14 238 543 45 356 5.26e-21 95.1
Msa0060380 MtrunA17_Chr7g0275021 26.513 347 190 13 243 553 34 351 5.87e-21 95.1
Msa0060380 MtrunA17_Chr2g0285061 24.931 361 212 12 217 545 8 341 1.16e-20 94.0
Msa0060380 MtrunA17_Chr1g0156931 26.822 343 194 13 238 549 36 352 1.52e-20 93.6
Msa0060380 MtrunA17_Chr1g0156931 30.282 142 75 3 76 196 214 352 8.17e-12 67.0
Msa0060380 MtrunA17_Chr3g0105401 28.875 329 192 14 242 545 27 338 3.46e-20 92.4
Msa0060380 MtrunA17_Chr4g0046151 28.763 372 203 20 222 552 16 366 3.60e-20 92.4
Msa0060380 MtrunA17_Chr3g0142921 26.844 339 185 13 238 541 31 341 3.67e-20 92.4
Msa0060380 MtrunA17_Chr3g0077571 26.453 344 189 12 235 545 22 334 4.92e-20 92.0
Msa0060380 MtrunA17_Chr5g0420811 28.614 339 206 12 222 544 12 330 8.74e-20 91.3
Msa0060380 MtrunA17_Chr2g0301551 28.082 292 170 11 289 559 37 309 2.34e-19 89.4
Msa0060380 MtrunA17_Chr2g0301551 29.461 241 113 10 3 206 89 309 2.65e-11 65.1
Msa0060380 MtrunA17_Chr3g0104831 26.644 289 161 10 304 559 29 299 2.40e-19 89.0
Msa0060380 MtrunA17_Chr3g0099231 26.590 346 192 12 242 552 27 345 4.47e-19 89.4
Msa0060380 MtrunA17_Chr3g0085881 27.389 314 200 10 242 544 32 328 5.01e-19 89.0
Msa0060380 MtrunA17_Chr5g0444401 27.350 351 186 17 242 553 27 347 9.03e-19 88.2
Msa0060380 MtrunA17_Chr2g0284991 25.294 340 228 8 219 545 9 335 9.27e-19 88.6
Msa0060380 MtrunA17_Chr1g0189901 27.874 348 184 16 243 553 31 348 1.09e-18 88.2
Msa0060380 MtrunA17_Chr8g0371471 26.000 350 192 16 237 549 35 354 1.98e-18 87.4
Msa0060380 MtrunA17_Chr4g0017431 25.000 380 213 13 222 561 10 357 2.56e-18 87.0
Msa0060380 MtrunA17_Chr2g0284951 25.284 352 207 10 219 544 9 330 6.68e-18 85.9
Msa0060380 MtrunA17_Chr3g0077581 25.538 325 210 11 242 545 35 348 8.87e-18 85.5
Msa0060380 MtrunA17_Chr2g0301571 27.740 292 171 11 289 559 37 309 1.24e-17 84.3
Msa0060380 MtrunA17_Chr8g0380031 27.044 318 198 11 242 544 83 381 1.31e-17 85.1
Msa0060380 MtrunA17_Chr3g0142941 27.168 346 191 15 227 541 36 351 1.68e-17 84.3
Msa0060380 MtrunA17_Chr5g0434621 26.910 301 178 13 275 554 62 341 2.05e-17 84.0
Msa0060380 MtrunA17_Chr3g0085231 25.982 331 200 9 242 552 30 335 2.51e-17 83.6
Msa0060380 MtrunA17_Chr2g0284921 29.245 212 132 6 242 443 33 236 4.07e-17 83.2
Msa0060380 MtrunA17_Chr2g0285001 26.480 321 203 14 242 545 32 336 5.36e-17 83.2
Msa0060380 MtrunA17_Chr5g0405821 27.901 362 215 17 218 547 13 360 1.49e-16 81.6
Msa0060380 MtrunA17_Chr2g0283541 29.464 224 126 7 361 559 76 292 2.73e-16 79.7
Msa0060380 MtrunA17_Chr3g0092131 25.914 301 167 11 278 549 63 336 3.59e-16 80.5
Msa0060380 MtrunA17_Chr3g0104801 40.299 134 70 5 241 366 42 173 5.52e-16 76.3
Msa0060380 MtrunA17_Chr1g0157001 27.303 304 181 13 267 549 63 347 6.48e-16 79.7
Msa0060380 MtrunA17_Chr7g0266061 24.412 340 185 12 244 549 43 344 5.34e-15 76.6
Msa0060380 MtrunA17_Chr8g0370951 25.066 379 215 15 214 552 3 352 2.57e-14 74.7
Msa0060380 MtrunA17_Chr4g0027571 28.037 214 114 5 20 196 3 213 2.79e-14 72.4
Msa0060380 MtrunA17_Chr4g0027571 26.667 225 127 8 351 549 1 213 1.96e-12 67.0
Msa0060380 MtrunA17_Chr5g0437421 24.776 335 219 13 242 555 31 353 2.05e-13 72.0
Msa0060380 MtrunA17_Chr6g0459921 24.060 266 151 8 333 562 106 356 7.94e-13 70.1
Msa0060380 MtrunA17_Chr8g0370981 25.000 420 206 16 214 553 14 404 1.13e-12 70.1
Msa0060380 MtrunA17_Chr2g0301561 28.899 218 127 8 288 491 36 239 1.40e-12 68.2
Msa0060380 MtrunA17_Chr1g0178931 22.881 354 206 14 235 556 27 345 2.16e-12 68.6
Msa0060380 MtrunA17_Chr7g0229581 31.469 143 73 3 76 196 7 146 3.82e-12 64.7
Msa0060380 MtrunA17_Chr3g0106911 34.395 157 81 7 268 421 7 144 5.51e-12 65.9
Msa0060380 MtrunA17_Chr2g0284941 26.180 233 154 7 219 442 9 232 6.70e-12 67.4
Msa0060380 MtrunA17_Chr1g0198351 24.551 334 182 12 235 536 35 330 1.37e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060380 AT3G26430.1 48.285 379 171 4 214 567 2 380 5.53e-125 372
Msa0060380 AT3G26430.1 42.023 257 104 4 3 214 124 380 1.83e-62 210
Msa0060380 AT1G67830.1 48.315 356 151 6 238 568 25 372 1.57e-113 343
Msa0060380 AT1G67830.1 40.927 259 100 5 2 215 122 372 1.30e-60 205
Msa0060380 AT5G14450.1 45.968 372 174 5 222 568 20 389 7.08e-108 329
Msa0060380 AT5G14450.1 39.300 257 111 5 3 215 134 389 2.17e-52 184
Msa0060380 AT3G27950.1 43.548 372 175 7 220 565 8 370 9.46e-90 281
Msa0060380 AT3G27950.1 39.689 257 104 6 2 212 119 370 1.53e-44 162
Msa0060380 AT1G54790.3 39.247 372 192 10 220 563 10 375 1.66e-77 250
Msa0060380 AT1G54790.3 34.940 249 115 5 3 205 123 370 1.10e-37 144
Msa0060380 AT4G01130.1 40.267 375 188 9 221 565 12 380 3.74e-76 246
Msa0060380 AT4G01130.1 28.627 255 136 5 3 212 127 380 2.91e-23 102
Msa0060380 AT1G54790.1 37.669 369 197 9 223 563 11 374 7.14e-74 240
Msa0060380 AT1G54790.1 34.940 249 115 5 3 205 122 369 5.95e-38 144
Msa0060380 AT3G05180.1 38.352 352 184 8 240 563 33 379 1.21e-70 232
Msa0060380 AT3G05180.1 33.992 253 121 4 2 209 127 378 6.24e-34 133
Msa0060380 AT1G56670.1 38.032 376 190 9 217 567 16 373 7.32e-70 229
Msa0060380 AT1G56670.1 32.927 246 130 4 4 214 128 373 2.96e-33 131
Msa0060380 AT1G54790.2 35.190 395 197 9 223 563 11 400 1.47e-69 230
Msa0060380 AT1G54790.2 39.645 169 89 4 3 159 122 289 1.92e-27 115
Msa0060380 AT1G09390.1 36.968 376 195 9 216 565 9 368 1.78e-66 221
Msa0060380 AT1G09390.1 32.520 246 131 3 2 212 123 368 9.41e-33 129
Msa0060380 AT4G01130.2 44.203 276 141 7 221 489 12 281 6.78e-63 210
Msa0060380 AT4G01130.2 32.716 162 91 6 3 150 127 284 7.83e-17 82.4
Msa0060380 AT3G62280.1 38.202 356 157 14 242 562 35 362 1.36e-61 207
Msa0060380 AT3G62280.1 32.377 244 124 7 5 210 123 363 6.47e-25 107
Msa0060380 AT1G56670.2 40.727 275 151 5 217 489 16 280 8.16e-55 187
Msa0060380 AT1G56670.2 35.329 167 99 1 4 161 128 294 3.05e-25 106
Msa0060380 AT1G28600.1 34.896 384 188 14 221 567 14 372 3.99e-48 172
Msa0060380 AT1G28600.1 30.986 213 106 6 49 222 170 380 1.81e-18 88.2
Msa0060380 AT4G01130.3 36.667 300 154 9 296 565 1 294 4.10e-48 169
Msa0060380 AT4G01130.3 28.627 255 136 5 3 212 41 294 7.90e-24 102
Msa0060380 AT3G62280.2 40.769 260 122 10 242 489 35 274 5.76e-47 166
Msa0060380 AT3G62280.2 34.783 161 90 4 5 153 123 280 3.13e-17 83.2
Msa0060380 AT1G28590.1 32.095 377 206 9 217 558 10 371 2.86e-44 162
Msa0060380 AT1G28590.1 26.531 196 105 5 49 205 176 371 6.38e-11 65.1
Msa0060380 AT1G31550.1 33.241 361 185 12 240 565 33 372 6.86e-44 161
Msa0060380 AT1G31550.1 26.943 193 105 6 49 205 175 367 4.21e-11 65.5
Msa0060380 AT1G31550.2 32.967 364 185 12 240 565 33 375 1.66e-43 160
Msa0060380 AT1G28580.1 31.606 386 208 11 219 565 9 377 2.40e-43 159
Msa0060380 AT1G28640.1 31.606 386 207 11 219 565 8 375 4.96e-43 158
Msa0060380 AT1G28570.1 31.186 388 209 12 217 565 6 374 6.78e-43 158
Msa0060380 AT1G28670.1 33.420 386 201 13 219 565 8 376 7.69e-43 158
Msa0060380 AT1G28610.2 33.245 376 196 12 219 557 7 364 2.40e-42 156
Msa0060380 AT2G27360.1 32.021 381 203 12 216 558 7 369 7.28e-42 155
Msa0060380 AT1G28660.2 32.041 387 203 14 219 565 8 374 2.97e-41 153
Msa0060380 AT1G28650.1 31.538 390 209 12 217 565 5 377 3.99e-41 153
Msa0060380 AT1G28660.1 32.216 388 202 15 219 565 8 375 2.24e-40 151
Msa0060380 AT5G45910.1 32.199 382 196 15 219 557 8 369 4.34e-39 147
Msa0060380 AT3G48460.1 28.796 382 206 10 220 560 15 371 5.24e-37 142
Msa0060380 AT5G40990.1 29.565 345 190 11 243 555 37 360 1.63e-27 114
Msa0060380 AT3G16370.1 30.793 328 187 14 242 545 29 340 3.70e-27 113
Msa0060380 AT1G28580.2 27.832 309 177 8 286 565 5 296 1.03e-26 110
Msa0060380 AT5G03820.1 27.697 343 187 14 242 549 32 348 7.86e-26 109
Msa0060380 AT4G26790.1 28.324 346 181 16 241 549 27 342 1.11e-25 108
Msa0060380 AT4G26790.2 28.324 346 181 16 241 549 27 342 1.11e-25 108
Msa0060380 AT5G03820.2 27.697 343 187 14 242 549 60 376 1.15e-25 109
Msa0060380 AT4G10950.2 28.530 347 191 14 242 556 70 391 3.76e-25 108
Msa0060380 AT1G20130.2 28.488 344 190 13 237 545 178 500 1.77e-23 104
Msa0060380 AT1G20130.1 28.488 344 190 13 237 545 198 520 1.77e-23 104
Msa0060380 AT2G42990.1 26.997 363 199 15 221 548 9 340 2.10e-23 102
Msa0060380 AT1G71120.1 27.042 355 197 12 230 552 18 342 4.16e-23 101
Msa0060380 AT5G03810.1 25.656 343 193 13 242 549 29 344 5.81e-23 100
Msa0060380 AT5G63170.1 31.541 279 155 11 219 482 4 261 6.03e-23 100
Msa0060380 AT3G14225.2 29.480 346 183 11 243 552 37 357 7.96e-23 100
Msa0060380 AT5G22810.1 29.326 341 185 14 242 549 33 350 8.45e-23 100
Msa0060380 AT1G53920.1 27.350 351 204 12 219 539 22 351 8.56e-23 100
Msa0060380 AT4G10950.1 28.242 347 188 15 242 556 70 387 1.28e-22 100
Msa0060380 AT3G14225.1 30.347 346 184 13 243 552 37 361 1.38e-22 100
Msa0060380 AT5G42170.1 27.778 342 191 13 238 549 45 360 2.45e-22 99.4
Msa0060380 AT1G59406.1 27.195 353 217 12 219 549 6 340 2.92e-22 99.0
Msa0060380 AT1G59030.1 27.195 353 217 12 219 549 6 340 2.92e-22 99.0
Msa0060380 AT1G58725.1 27.195 353 217 12 219 549 6 340 2.92e-22 99.0
Msa0060380 AT5G15720.1 26.611 357 198 12 242 561 29 358 2.99e-22 99.0
Msa0060380 AT3G04290.1 29.947 374 190 17 218 553 7 346 5.56e-22 98.2
Msa0060380 AT1G28600.2 37.379 206 104 8 221 416 14 204 6.41e-22 95.1
Msa0060380 AT2G23540.1 25.414 362 192 14 237 552 42 371 1.53e-21 97.4
Msa0060380 AT1G29670.1 25.496 353 227 12 214 545 2 339 1.78e-21 96.7
Msa0060380 AT1G58520.3 26.946 334 197 11 238 549 25 333 4.47e-21 95.1
Msa0060380 AT1G58525.1 26.946 334 197 11 238 549 25 333 4.47e-21 95.1
Msa0060380 AT1G75900.1 26.911 327 199 13 242 545 42 351 4.61e-21 95.5
Msa0060380 AT1G29670.2 26.087 345 219 12 222 545 78 407 4.61e-21 96.3
Msa0060380 AT1G71691.2 27.811 338 203 14 231 545 41 360 5.70e-21 95.5
Msa0060380 AT4G28780.1 27.954 347 185 15 243 553 31 348 5.87e-21 95.1
Msa0060380 AT5G45670.1 24.857 350 230 9 217 545 1 338 8.01e-21 94.7
Msa0060380 AT4G18970.1 25.231 325 208 9 242 545 27 337 8.21e-21 94.7
Msa0060380 AT4G18970.2 25.077 323 211 8 242 545 27 337 1.02e-20 95.1
Msa0060380 AT3G50400.1 26.404 356 189 16 241 552 32 358 1.11e-20 94.7
Msa0060380 AT5G08460.1 26.301 346 217 10 241 561 47 379 2.04e-20 94.0
Msa0060380 AT1G53940.2 28.406 345 194 12 243 555 39 362 2.09e-20 94.0
Msa0060380 AT3G43550.1 29.151 271 162 9 223 481 10 262 2.29e-20 92.0
Msa0060380 AT5G33370.1 27.429 350 183 15 243 553 30 347 2.31e-20 93.6
Msa0060380 AT3G53100.1 26.703 367 211 16 215 549 2 342 3.12e-20 92.8
Msa0060380 AT1G06990.1 26.647 334 187 14 241 541 35 343 3.14e-20 93.2
Msa0060380 AT1G73610.1 26.567 335 194 11 238 549 30 335 3.71e-20 92.4
Msa0060380 AT2G04570.1 25.272 368 215 14 219 554 7 346 4.23e-20 92.4
Msa0060380 AT2G30310.1 28.228 333 196 14 235 541 26 341 5.57e-20 92.4
Msa0060380 AT1G28610.1 36.058 208 113 7 219 416 7 204 6.70e-20 89.7
Msa0060380 AT1G33811.1 25.070 359 226 11 215 545 5 348 1.54e-19 91.3
Msa0060380 AT1G53990.1 28.161 348 186 14 243 558 35 350 1.92e-19 90.9
Msa0060380 AT1G54020.2 25.215 349 198 12 222 543 12 324 2.14e-19 90.9
Msa0060380 AT1G54030.1 28.276 290 162 10 267 542 80 337 2.91e-19 90.9
Msa0060380 AT5G45950.1 24.926 337 192 14 243 548 40 346 4.61e-19 89.4
Msa0060380 AT2G19060.1 27.164 335 203 13 242 557 29 341 6.14e-19 89.0
Msa0060380 AT1G71250.1 26.400 375 232 12 209 558 4 359 6.52e-19 89.4
Msa0060380 AT1G71691.3 28.044 271 166 10 231 489 41 294 7.58e-19 88.2
Msa0060380 AT2G30220.1 27.660 329 195 15 241 543 31 342 1.24e-18 88.2
Msa0060380 AT2G19010.1 25.697 323 197 10 242 545 29 327 1.77e-18 87.4
Msa0060380 AT2G19010.2 25.697 323 197 10 242 545 59 357 2.24e-18 87.8
Msa0060380 AT2G03980.2 26.748 329 194 15 240 542 40 347 4.71e-18 86.7
Msa0060380 AT2G03980.3 26.748 329 194 15 240 542 40 347 4.71e-18 86.7
Msa0060380 AT2G03980.1 26.748 329 194 15 240 542 40 347 4.71e-18 86.7
Msa0060380 AT2G03980.4 26.748 329 194 15 240 542 40 347 4.71e-18 86.7
Msa0060380 AT1G20120.1 28.090 356 196 15 236 556 71 401 5.83e-18 86.7
Msa0060380 AT2G24560.1 25.982 331 202 13 235 539 26 339 1.23e-17 85.1
Msa0060380 AT1G58430.1 27.134 328 190 14 241 539 33 340 1.37e-17 85.1
Msa0060380 AT5G15720.2 27.376 263 158 8 242 488 29 274 1.71e-17 84.0
Msa0060380 AT1G29660.1 25.000 352 230 11 213 545 4 340 2.17e-17 84.7
Msa0060380 AT1G28570.2 25.974 231 137 6 361 565 80 302 2.21e-17 84.0
Msa0060380 AT5G37690.1 26.536 358 218 13 217 549 1 338 3.00e-17 84.0
Msa0060380 AT1G28570.3 26.316 209 121 5 382 565 11 211 3.05e-17 81.6
Msa0060380 AT2G31540.1 26.074 349 212 14 235 554 27 358 4.43e-17 83.6
Msa0060380 AT1G23500.1 30.116 259 151 10 243 489 35 275 5.91e-17 82.8
Msa0060380 AT1G75930.1 26.374 273 172 9 213 474 2 256 6.17e-17 82.8
Msa0060380 AT2G24560.2 27.407 270 163 10 235 488 26 278 6.17e-17 82.4
Msa0060380 AT1G53940.1 29.893 281 162 9 221 481 7 272 7.35e-17 82.0
Msa0060380 AT1G75920.2 27.701 361 219 16 213 552 2 341 1.13e-16 82.0
Msa0060380 AT2G19050.1 25.449 334 208 9 242 557 30 340 1.63e-16 81.6
Msa0060380 AT2G19050.1 24.775 222 128 5 16 204 125 340 8.98e-11 64.3
Msa0060380 AT2G04020.1 29.004 231 139 8 240 459 40 256 2.08e-16 79.7
Msa0060380 AT1G20135.1 25.648 347 213 11 220 546 6 327 2.88e-16 80.5
Msa0060380 AT4G30140.1 27.273 330 201 10 242 557 32 336 3.96e-16 80.5
Msa0060380 AT2G40250.1 24.159 327 211 13 243 545 36 349 1.02e-15 79.3
Msa0060380 AT1G54030.2 29.412 221 118 7 267 481 80 268 1.25e-15 78.6
Msa0060380 AT2G04020.2 29.907 214 126 7 240 443 40 239 1.30e-15 78.6
Msa0060380 AT1G75880.2 25.698 358 218 14 222 549 26 365 2.22e-15 78.6
Msa0060380 AT2G19050.2 27.237 257 158 7 242 489 30 266 2.82e-15 77.0
Msa0060380 AT5G41890.1 26.571 350 192 16 245 552 33 359 3.08e-15 78.2
Msa0060380 AT5G45960.1 26.984 252 157 9 243 481 47 284 3.56e-15 77.8
Msa0060380 AT1G75880.1 25.627 359 218 15 222 549 26 366 4.11e-15 77.8
Msa0060380 AT4G16230.1 30.682 264 143 13 219 462 4 247 9.46e-15 74.7
Msa0060380 AT1G54000.1 23.077 364 200 13 219 544 12 333 1.00e-14 76.6
Msa0060380 AT5G03980.1 26.842 190 103 4 382 545 127 306 1.02e-14 75.9
Msa0060380 AT5G03980.1 28.022 182 91 6 49 192 127 306 7.23e-14 73.2
Msa0060380 AT1G75890.2 26.000 350 214 14 224 545 25 357 1.05e-14 76.3
Msa0060380 AT1G75890.3 26.000 350 214 14 224 545 54 386 1.08e-14 76.6
Msa0060380 AT5G15720.3 24.510 306 171 10 290 561 48 327 1.23e-14 75.9
Msa0060380 AT1G54010.1 23.120 359 206 11 219 544 12 333 1.74e-14 75.9
Msa0060380 AT1G75890.1 25.414 362 214 16 224 545 25 370 1.43e-13 73.2
Msa0060380 AT1G71691.1 25.993 277 169 12 287 545 1 259 4.65e-13 70.5
Msa0060380 AT5G03600.1 24.324 333 187 14 242 546 13 308 7.94e-13 70.1
Msa0060380 AT5G03600.2 24.324 333 187 14 242 546 48 343 1.04e-12 70.1
Msa0060380 AT5G37690.2 25.419 358 214 14 217 549 1 330 1.87e-12 69.3
Msa0060380 AT1G74460.1 26.644 289 172 12 278 545 63 332 3.05e-12 68.9
Msa0060380 AT3G14220.1 23.615 343 194 15 242 552 31 337 2.36e-11 66.2

Find 138 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTATTGGTGGTTATTT+TGG 0.124216 1_2:-18068553 Msa0060380:CDS
CAATTCTTTGTAGCAAATAT+TGG 0.178924 1_2:+18069416 None:intergenic
TACCCAAAACAAAGTTTATT+AGG 0.181436 1_2:-18074662 Msa0060380:CDS
TGGATGTGTGCCTTTAATTT+TGG 0.224209 1_2:-18073644 Msa0060380:CDS
AACCATCTACTAGAATAATA+TGG 0.227325 1_2:-18073178 Msa0060380:CDS
ATCCCTAATAAACTTTGTTT+TGG 0.232433 1_2:+18074659 None:intergenic
ATTTAGGGGCTAGGTCATTT+TGG 0.232450 1_2:-18067691 Msa0060380:CDS
ACCTATATCAAATGTGTATA+AGG 0.246812 1_2:+18074461 None:intergenic
TGGTTGCACTCCTACGATTT+TGG 0.248180 1_2:-18067648 Msa0060380:CDS
TTTGGAATAATAATCTTCTT+TGG 0.255011 1_2:+18074485 None:intergenic
ATCTCTAATGAGATTTGTTT+TGG 0.255196 1_2:+18068771 None:intergenic
TATGAAATTGTTTACTATAT+CGG 0.256970 1_2:+18068495 None:intergenic
ATCTAGAATATATACAATTT+AGG 0.259358 1_2:-18067707 Msa0060380:intron
AATTAGGGGCCAGGTCATTT+TGG 0.264269 1_2:-18073687 Msa0060380:CDS
TACTGAATCTGAAGGGAAAA+TGG 0.272154 1_2:+18074705 None:intergenic
GGAAAATTGGCCAAAATTAA+AGG 0.273646 1_2:+18073634 None:intergenic
TATGAAATTCTTTACTATAT+CGG 0.274874 1_2:+18074374 None:intergenic
ATCTAGAATATATACAAATT+AGG 0.275565 1_2:-18073703 Msa0060380:intron
ACCAATATCAAATGTGTATA+AGG 0.276105 1_2:+18068582 None:intergenic
AATTCTTTGTAGCAAATATT+GGG 0.277876 1_2:+18069417 None:intergenic
TCTAGAATATATACAAATTA+GGG 0.278589 1_2:-18073702 Msa0060380:intron
CTTTATAGCAGATGGAAAAT+TGG 0.280511 1_2:+18073621 None:intergenic
TCTAGAATATATACAATTTA+GGG 0.282298 1_2:-18067706 Msa0060380:intron
CATGCCATATCTAGAGAAAT+AGG 0.282392 1_2:+18066990 None:intergenic
TACTGAATTTGAAGAGAAAA+TGG 0.283865 1_2:+18068817 None:intergenic
ATCCTCCCATTCCACTAAAT+AGG 0.284287 1_2:-18073085 Msa0060380:CDS
TTGGAATAATAATCTTCTTT+GGG 0.286703 1_2:+18074486 None:intergenic
TCCCATATTATTCTAGTAGA+TGG 0.294746 1_2:+18073176 None:intergenic
CGAATCATTATTGATTTCAT+AGG 0.296923 1_2:-18069260 Msa0060380:intron
GCCTTATACACATTTGATAT+TGG 0.302387 1_2:-18068583 Msa0060380:CDS
TCCCAAATGATTCTAGTAGA+TGG 0.307386 1_2:+18067086 None:intergenic
CCTAATAGTATTATACCTAA+TGG 0.308302 1_2:-18068850 Msa0060380:CDS
ATTAAGATATGGACTTAGAT+AGG 0.318215 1_2:+18068936 None:intergenic
ATTAAGATATGGACTTAGAT+AGG 0.318215 1_2:+18074824 None:intergenic
ACAAATCTCATTAGAGATAA+AGG 0.323654 1_2:-18068766 Msa0060380:intron
CCATTAGGTATAATGTTGTT+AGG 0.325094 1_2:+18074738 None:intergenic
GGAGAAATCATAAACATAAA+TGG 0.328429 1_2:-18073230 Msa0060380:CDS
ACCCAAAACAAAGTTTATTA+GGG 0.328879 1_2:-18074661 Msa0060380:CDS
GGAGCAACTATAAACATAAA+TGG 0.333844 1_2:-18067140 Msa0060380:CDS
TAATTTCCCATCTGCAATAA+AGG 0.336425 1_2:-18067624 Msa0060380:CDS
CCATTAGGTATAATACTATT+AGG 0.336828 1_2:+18068850 None:intergenic
ATTGGTCAAAATGATCTTAT+TGG 0.337079 1_2:-18068565 Msa0060380:CDS
AGTCCATATCTTAATTCTCT+TGG 0.339126 1_2:-18068928 Msa0060380:CDS
AGTCCATATCTTAATTCTCT+TGG 0.339126 1_2:-18074816 Msa0060380:five_prime_UTR
TTGTAACATGCCCTATTTAG+TGG 0.352126 1_2:+18073074 None:intergenic
ACCCATCTACTAGAATCATT+TGG 0.354951 1_2:-18067088 Msa0060380:CDS
GTCTTTGATCAAATCTCTAC+TGG 0.362400 1_2:-18067029 Msa0060380:CDS
ATGAAATTCTTTACTATATC+GGG 0.369299 1_2:+18074375 None:intergenic
TCCTCCCATTCCACTAAATA+GGG 0.373102 1_2:-18073084 Msa0060380:CDS
TCCTCCTATTTCTCTAGATA+TGG 0.373294 1_2:-18066994 Msa0060380:CDS
ATCAAATGTGTATAAGGCTT+TGG 0.374053 1_2:+18074467 None:intergenic
TTTCCTGCCATATTTAGCTT+TGG 0.374076 1_2:-18069389 Msa0060380:CDS
ATGAAATTGTTTACTATATC+GGG 0.374442 1_2:+18068496 None:intergenic
TGAAGCACCAAAGCTAAATA+TGG 0.376452 1_2:+18069382 None:intergenic
CCTAACAACATTATACCTAA+TGG 0.377474 1_2:-18074738 Msa0060380:five_prime_UTR
CCCATCTACTAGAATCATTT+GGG 0.387794 1_2:-18067087 Msa0060380:CDS
TTAAAACAAATTTAAATATG+AGG 0.391253 1_2:+18074959 None:intergenic
AAACGTTGACACTGGTGGTT+TGG 0.395539 1_2:-18069360 Msa0060380:CDS
AATTATTTCTATATTTATGA+AGG 0.400759 1_2:-18074894 Msa0060380:five_prime_UTR
GTCCATATCTTAATTCTCTT+GGG 0.407003 1_2:-18068927 Msa0060380:CDS
GACCCAAGAGAATTAAGATA+TGG 0.409299 1_2:+18074813 None:intergenic
ACAAAGTTTATTAGGGATCA+AGG 0.410667 1_2:-18074654 Msa0060380:intron
GTCCATATCTTAATTCTCTT+GGG 0.414439 1_2:-18074815 Msa0060380:five_prime_UTR
GTAATTTCAGCACAGAGCTT+TGG 0.415339 1_2:-18068964 Msa0060380:intron
AATGGACTAAATATCCCATT+AGG 0.416788 1_2:+18068835 None:intergenic
CTAATAGTATTATACCTAAT+GGG 0.423195 1_2:-18068849 Msa0060380:CDS
CAAGCACCACCTTCTCCATA+TGG 0.425672 1_2:-18069326 Msa0060380:CDS
TTGTATATGTTGAGCTTACA+TGG 0.426780 1_2:-18074932 Msa0060380:five_prime_UTR
ATACACAACACTGGACCAAT+TGG 0.429145 1_2:-18073664 Msa0060380:CDS
AATGGTACAAACATTGTTGT+TGG 0.431505 1_2:-18073212 Msa0060380:CDS
TGAAAATATGTCTCTCCATA+TGG 0.436936 1_2:+18069311 None:intergenic
TAACTATCCTTTATTGCAGA+TGG 0.441895 1_2:+18067617 None:intergenic
ACCATCTACTAGAATAATAT+GGG 0.442115 1_2:-18073177 Msa0060380:CDS
CATGGTGCAAACTTCGCAAC+AGG 0.459101 1_2:-18068892 Msa0060380:CDS
AATGGACTGAACATTCCATT+AGG 0.460673 1_2:+18074723 None:intergenic
GCCTTATACACATTTGATAT+AGG 0.463073 1_2:-18074462 Msa0060380:CDS
GACCCAAGAGAATTAAGATA+TGG 0.468859 1_2:+18068925 None:intergenic
TGGCTATCCTTTATAGCAGA+TGG 0.469012 1_2:+18073613 None:intergenic
CATGCCCTATTTAGTGGAAT+GGG 0.472312 1_2:+18073080 None:intergenic
ATATATACAATTTAGGGGCT+AGG 0.474694 1_2:-18067700 Msa0060380:CDS
GGTCAAAATGATCTTACTGC+TGG 0.478092 1_2:-18074441 Msa0060380:CDS
ATTAAAGGCACACATCCAAT+TGG 0.488389 1_2:+18073649 None:intergenic
ACATGCCCTATTTAGTGGAA+TGG 0.489175 1_2:+18073079 None:intergenic
CCCAAATGATTCTAGTAGAT+GGG 0.491642 1_2:+18067087 None:intergenic
GGTCAAAATGATCTTATTGG+TGG 0.492651 1_2:-18068562 Msa0060380:CDS
ATCAAATGTGTATAAGGCGT+TGG 0.500122 1_2:+18068588 None:intergenic
GATCGCTACGAAGTTGAGCT+AGG 0.500570 1_2:+18067534 None:intergenic
TGTATTGCTTTGCACAACCT+TGG 0.503056 1_2:+18073593 None:intergenic
TTAAGATATGGACTTAGATA+GGG 0.503696 1_2:+18068937 None:intergenic
TTAAGATATGGACTTAGATA+GGG 0.503696 1_2:+18074825 None:intergenic
TGGAGAAGGTGGTGCTTGAA+AGG 0.512450 1_2:+18069331 None:intergenic
GATCCACACGAAGTTGAGCT+AGG 0.516606 1_2:+18073530 None:intergenic
CACGTGGCATGTTGTGGCTA+TGG 0.516845 1_2:-18067191 Msa0060380:CDS
ATATATACAAATTAGGGGCC+AGG 0.517339 1_2:-18073696 Msa0060380:CDS
TACAACATTCATGTTGGATG+TGG 0.534376 1_2:-18067161 Msa0060380:CDS
AACTATCCTTTATTGCAGAT+GGG 0.538312 1_2:+18067618 None:intergenic
TCTGCAATAAAGGATAGTTA+TGG 0.538464 1_2:-18067614 Msa0060380:CDS
ATTCTTTGTAGCAAATATTG+GGG 0.543366 1_2:+18069418 None:intergenic
ATTATTTCTATATTTATGAA+GGG 0.546660 1_2:-18074893 Msa0060380:five_prime_UTR
CTTGGGTCTAACTTCACACA+TGG 0.547798 1_2:-18068910 Msa0060380:CDS
GTTAGCTGTCTCTGTGAAGT+GGG 0.552378 1_2:+18067058 None:intergenic
GGAAAGTACAACATTCATGT+TGG 0.552770 1_2:-18067167 Msa0060380:CDS
ATCGTAGGAGTGCAACCACT+TGG 0.554426 1_2:+18067653 None:intergenic
TGGAATAATAATCTTCTTTG+GGG 0.555591 1_2:+18074487 None:intergenic
ACATATGTGATTGCAGCTAG+TGG 0.560723 1_2:+18073505 None:intergenic
GGTGCAAACTTTGCAACAGC+AGG 0.564350 1_2:-18074777 Msa0060380:five_prime_UTR
GCACCAAAGCTAAATATGGC+AGG 0.569703 1_2:+18069386 None:intergenic
GGTGCTTCAAACGTTGACAC+TGG 0.571755 1_2:-18069368 Msa0060380:CDS
CTTCCACACGTGGCATGTTG+TGG 0.572010 1_2:-18067197 Msa0060380:CDS
GTCTCTCCATATGGAGAAGG+TGG 0.572633 1_2:+18069320 None:intergenic
TCTACTAGAATCATTTGGGA+TGG 0.589271 1_2:-18067083 Msa0060380:CDS
AGCCCTAGCTCAACTTCGTG+TGG 0.589422 1_2:-18073533 Msa0060380:CDS
ATCGCTACGAAGTTGAGCTA+GGG 0.590736 1_2:+18067535 None:intergenic
TATGTCTCTCCATATGGAGA+AGG 0.594276 1_2:+18069317 None:intergenic
TGTTAGCTGTCTCTGTGAAG+TGG 0.596585 1_2:+18067057 None:intergenic
ACATATGCGATTGCAGCAAG+AGG 0.597236 1_2:+18067509 None:intergenic
GCCCTATTTAGTGGAATGGG+AGG 0.602436 1_2:+18073083 None:intergenic
ATCCACACGAAGTTGAGCTA+GGG 0.606515 1_2:+18073531 None:intergenic
AGGATTTGAGCTTCCACACG+TGG 0.609396 1_2:-18067207 Msa0060380:intron
CAATTTCATAGAGAGTATCA+AGG 0.612160 1_2:-18068482 Msa0060380:intron
GGGAAATTAGCCAAAATCGT+AGG 0.621519 1_2:+18067638 None:intergenic
AGCACAATCAAAGACACAAG+TGG 0.622514 1_2:+18069458 None:intergenic
ATTGAATGTACTGAATCTGA+AGG 0.624133 1_2:+18074697 None:intergenic
GCTTCAAACGTTGACACTGG+TGG 0.626758 1_2:-18069365 Msa0060380:CDS
TCAACTGGAAGATACTCTGA+TGG 0.630816 1_2:-18069284 Msa0060380:CDS
TAGCCACAACATGCCACGTG+TGG 0.635122 1_2:+18067194 None:intergenic
TCTACTAGAATAATATGGGA+TGG 0.641361 1_2:-18073173 Msa0060380:CDS
TTCTTTGTAGCAAATATTGG+GGG 0.645637 1_2:+18069419 None:intergenic
GGTGCAAACTTCGCAACAGG+AGG 0.653307 1_2:-18068889 Msa0060380:CDS
GCCATATCTAGAGAAATAGG+AGG 0.655655 1_2:+18066993 None:intergenic
GTGGCATGTTGTGGCTATGG+AGG 0.666464 1_2:-18067188 Msa0060380:CDS
CTAGAATATATACAATTTAG+GGG 0.671423 1_2:-18067705 Msa0060380:intron
TTGAATGTACTGAATCTGAA+GGG 0.676543 1_2:+18074698 None:intergenic
TCTGCTATAAAGGATAGCCA+AGG 0.676832 1_2:-18073610 Msa0060380:CDS
CTAGAATATATACAAATTAG+GGG 0.698873 1_2:-18073701 Msa0060380:intron
ATACACAACACAGGGCCAAG+TGG 0.718066 1_2:-18067668 Msa0060380:CDS
GTTGTGTATCCAAAATGACC+TGG 0.720607 1_2:+18073678 None:intergenic
GGATGGTACACATTACACAG+AGG 0.801423 1_2:-18073156 Msa0060380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTATTTTATTTTTTTG+AGG - chr1_2:18067005-18067024 Msa0060380:CDS 10.0%
!!! TTTTACTTAACAAAAAAAAA+AGG + chr1_2:18067073-18067092 None:intergenic 10.0%
!! TTAAAACAAATTTAAATATG+AGG + chr1_2:18067135-18067154 None:intergenic 10.0%
!!! AATTATTTCTATATTTATGA+AGG - chr1_2:18067197-18067216 Msa0060380:CDS 10.0%
!!! ATTATTTCTATATTTATGAA+GGG - chr1_2:18067198-18067217 Msa0060380:CDS 10.0%
!! GAAATTAAAAAAGAAAAAAT+TGG + chr1_2:18067546-18067565 None:intergenic 10.0%
!!! ATATTTTAATTTAAAGTTGA+AGG - chr1_2:18068534-18068553 Msa0060380:CDS 10.0%
!! TAAAGAATAAAAAGAATTAA+TGG + chr1_2:18071276-18071295 None:intergenic 10.0%
!! AATTTAATTAAGGAAAATTT+AGG + chr1_2:18071905-18071924 None:intergenic 10.0%
!!! ATCTCATATTTTTTTATTTA+TGG - chr1_2:18071729-18071748 Msa0060380:intron 10.0%
!! AATTTAATTAAGGAAAATTT+AGG - chr1_2:18071905-18071924 Msa0060380:intron 10.0%
!! TATTAAACAATAAACATATT+CGG - chr1_2:18072495-18072514 Msa0060380:intron 10.0%
!! ATTAAAATAGAATATGTAAT+GGG + chr1_2:18072914-18072933 None:intergenic 10.0%
!!! TAATATTTTTTAAATCACAA+TGG - chr1_2:18074766-18074785 Msa0060380:five_prime_UTR 10.0%
!!! GTAATTTTACTAAAATACTA+TGG - chr1_2:18067097-18067116 Msa0060380:CDS 15.0%
!! TATGAAATTCTTTACTATAT+CGG + chr1_2:18067720-18067739 None:intergenic 15.0%
!! TAAACAAAATGATTTATGTT+TGG - chr1_2:18067902-18067921 Msa0060380:intron 15.0%
!! ATAATTACTAAAATAGACAT+AGG - chr1_2:18067955-18067974 Msa0060380:intron 15.0%
!! ATTAATAAAATGCAACTTAA+TGG - chr1_2:18068363-18068382 Msa0060380:intron 15.0%
!!! ATCTAGAATATATACAAATT+AGG - chr1_2:18068388-18068407 Msa0060380:intron 15.0%
!!! TCTAGAATATATACAAATTA+GGG - chr1_2:18068389-18068408 Msa0060380:intron 15.0%
!! TTAAATCTTCATTAATATGT+AGG - chr1_2:18068768-18068787 Msa0060380:CDS 15.0%
!! TTCTTTATATTAGACATATA+TGG - chr1_2:18069116-18069135 Msa0060380:intron 15.0%
!! TATATTTACAACAAGTTTAT+TGG - chr1_2:18069173-18069192 Msa0060380:intron 15.0%
!! ACTTATTAAAATCAAACTTA+AGG - chr1_2:18069964-18069983 Msa0060380:intron 15.0%
!! CTTATTAAAATCAAACTTAA+GGG - chr1_2:18069965-18069984 Msa0060380:intron 15.0%
!!! ATTACTAATTTGTTTCAAAA+TGG + chr1_2:18070198-18070217 None:intergenic 15.0%
!! AAATTAGTAATTTCTATGAA+TGG - chr1_2:18070207-18070226 Msa0060380:intron 15.0%
!!! TAAACAAAATTTCACTTTTT+AGG + chr1_2:18070797-18070816 None:intergenic 15.0%
!!! TTCAACACATATTTTTTTAT+TGG - chr1_2:18070995-18071014 Msa0060380:intron 15.0%
!!! TTAATTCTTTAATCCTTTTA+AGG - chr1_2:18071320-18071339 Msa0060380:intron 15.0%
!! ATTATGTTTAATTCCTTAAA+AGG + chr1_2:18071336-18071355 None:intergenic 15.0%
!!! TTTTATTGAATCATCATTTT+AGG + chr1_2:18071447-18071466 None:intergenic 15.0%
!!! GTTTTATTTGTACAAAAAAA+AGG + chr1_2:18071638-18071657 None:intergenic 15.0%
!!! TTTTTTTAAGAATAGAAAAG+TGG + chr1_2:18071660-18071679 None:intergenic 15.0%
!! ATTGAATATGTAGTAATTAT+AGG - chr1_2:18071706-18071725 Msa0060380:intron 15.0%
!!! ATTTAGGTTTAAAGAATTAA+TGG - chr1_2:18071921-18071940 Msa0060380:intron 15.0%
!! GTCAAAAAAAAAAAAAAAAC+AGG - chr1_2:18071949-18071968 Msa0060380:intron 15.0%
!!! GACATTTTATCAAAAAAAAT+TGG + chr1_2:18072304-18072323 None:intergenic 15.0%
!! GATTAAAATAGAATATGTAA+TGG + chr1_2:18072915-18072934 None:intergenic 15.0%
!!! TATTTCAAAATTTTCTTATC+AGG - chr1_2:18073439-18073458 Msa0060380:intron 15.0%
!! TATGAAATTGTTTACTATAT+CGG + chr1_2:18073599-18073618 None:intergenic 15.0%
!! AAAAAAAAACATTATAGTTG+AGG - chr1_2:18073837-18073856 Msa0060380:intron 15.0%
!!! ATCTAGAATATATACAATTT+AGG - chr1_2:18074384-18074403 Msa0060380:intron 15.0%
!!! TCTAGAATATATACAATTTA+GGG - chr1_2:18074385-18074404 Msa0060380:intron 15.0%
!!! GTATTTTAATTTAAAGTTGA+AGG - chr1_2:18074530-18074549 Msa0060380:intron 15.0%
!!! TTTTTTTGGATTTTGAAAAA+GGG + chr1_2:18074631-18074650 None:intergenic 15.0%
!!! ATTTTTTTGGATTTTGAAAA+AGG + chr1_2:18074632-18074651 None:intergenic 15.0%
!! TTTCAAAATCCAAAAAAATA+TGG - chr1_2:18074633-18074652 Msa0060380:intron 15.0%
!!! TATATGTTATTGATTTGATT+TGG - chr1_2:18074844-18074863 Msa0060380:five_prime_UTR 15.0%
!! TTGGAATAATAATCTTCTTT+GGG + chr1_2:18067608-18067627 None:intergenic 20.0%
!!! TTTGGAATAATAATCTTCTT+TGG + chr1_2:18067609-18067628 None:intergenic 20.0%
!! ATGAAATTCTTTACTATATC+GGG + chr1_2:18067719-18067738 None:intergenic 20.0%
!! TAAAGAATGAGAATTGATAA+AGG - chr1_2:18067992-18068011 Msa0060380:intron 20.0%
!! GATTATGTAATTGTATTGTT+TGG + chr1_2:18068253-18068272 None:intergenic 20.0%
!! CTAGAATATATACAAATTAG+GGG - chr1_2:18068390-18068409 Msa0060380:intron 20.0%
!! TCCAAAATCCAAAAAAAATA+CGG - chr1_2:18068638-18068657 Msa0060380:intron 20.0%
!!! ATCGATCATATTTTTTAGTT+AGG - chr1_2:18068674-18068693 Msa0060380:intron 20.0%
!!! TCGATCATATTTTTTAGTTA+GGG - chr1_2:18068675-18068694 Msa0060380:intron 20.0%
!!! TTTTTTAGTTAGGGTATATT+TGG - chr1_2:18068684-18068703 Msa0060380:intron 20.0%
!!! TTTCATTGATAATTCCAAAA+AGG + chr1_2:18069153-18069172 None:intergenic 20.0%
!! TATGTTTACATCAAGAATAT+TGG - chr1_2:18069241-18069260 Msa0060380:intron 20.0%
!! ATTTGTAATGATCTAATGAA+GGG + chr1_2:18069565-18069584 None:intergenic 20.0%
!! TCTATAAATAAAACACACTA+GGG + chr1_2:18069837-18069856 None:intergenic 20.0%
!! ATTATGAAATTAAAGAAACC+CGG + chr1_2:18069928-18069947 None:intergenic 20.0%
!! CATGATAAAATCAAACTTAA+GGG - chr1_2:18070008-18070027 Msa0060380:intron 20.0%
!!! CTAATGAAAAGTATAACTAA+GGG + chr1_2:18070051-18070070 None:intergenic 20.0%
!!! CTTAGTTATACTTTTCATTA+GGG - chr1_2:18070050-18070069 Msa0060380:intron 20.0%
!! GTAAAAAAGAACAATAATAG+TGG - chr1_2:18070076-18070095 Msa0060380:intron 20.0%
!! AAACCAAACTGTTAATTTAA+TGG - chr1_2:18070104-18070123 Msa0060380:intron 20.0%
!!! TATGAATGGATTCTTTAAAT+AGG - chr1_2:18070221-18070240 Msa0060380:intron 20.0%
!! TTTAATTCATAAAATGTCGT+TGG - chr1_2:18070328-18070347 Msa0060380:intron 20.0%
!!! TTTTGTATGGTTTCTTAAAT+TGG + chr1_2:18070403-18070422 None:intergenic 20.0%
!!! AGCAATTTTCGTTATTTTTT+TGG + chr1_2:18071059-18071078 None:intergenic 20.0%
!! AAAAAGAATCGTGTATTTAA+TGG - chr1_2:18071787-18071806 Msa0060380:intron 20.0%
!! AAATCCATATTTCTTCATTA+TGG - chr1_2:18071815-18071834 Msa0060380:intron 20.0%
!! AAAAAAAAAAAACAGGTTTG+AGG - chr1_2:18071956-18071975 Msa0060380:intron 20.0%
!! TTTACTGAGTAAATTTATGT+TGG + chr1_2:18072170-18072189 None:intergenic 20.0%
!! ATGTTTGTATCACTAAAATT+TGG - chr1_2:18072216-18072235 Msa0060380:intron 20.0%
!! ACTAAATACAATTACTAGAA+AGG - chr1_2:18072391-18072410 Msa0060380:intron 20.0%
!! TATTAAGTAGAAGAAAACTT+GGG + chr1_2:18072419-18072438 None:intergenic 20.0%
!!! TATTATTCTTTTGTTTAGTG+AGG + chr1_2:18072455-18072474 None:intergenic 20.0%
!! AATTCTTTGTAGCAAATATT+GGG + chr1_2:18072677-18072696 None:intergenic 20.0%
!! CTAATAGTATTATACCTAAT+GGG - chr1_2:18073242-18073261 Msa0060380:intron 20.0%
!! GAAATAAAGAAAGAAAAAAG+AGG + chr1_2:18073425-18073444 None:intergenic 20.0%
!! ATGAAATTGTTTACTATATC+GGG + chr1_2:18073598-18073617 None:intergenic 20.0%
!! ATCTAATAGTTGAAATCTAT+TGG + chr1_2:18073726-18073745 None:intergenic 20.0%
!! TACTATACTATTTATCAAAG+TGG + chr1_2:18073882-18073901 None:intergenic 20.0%
!! TGTCAATTCAACAAAAATAA+AGG - chr1_2:18074038-18074057 Msa0060380:intron 20.0%
!! TGTATGAATTATATGTATTG+AGG - chr1_2:18074067-18074086 Msa0060380:intron 20.0%
!!! TTCCTATGTTCTTTTTTAAA+TGG - chr1_2:18074104-18074123 Msa0060380:intron 20.0%
!! ATCCATTTAAAAAAGAACAT+AGG + chr1_2:18074109-18074128 None:intergenic 20.0%
!! ATATCATGAGAATCTATTAT+AGG + chr1_2:18074280-18074299 None:intergenic 20.0%
!! CTAGAATATATACAATTTAG+GGG - chr1_2:18074386-18074405 Msa0060380:intron 20.0%
!!! TTTAGCTTACCATATTTTTT+TGG + chr1_2:18074645-18074664 None:intergenic 20.0%
! TTAAGATATGGACTTAGATA+GGG + chr1_2:18067269-18067288 None:intergenic 25.0%
! ATTAAGATATGGACTTAGAT+AGG + chr1_2:18067270-18067289 None:intergenic 25.0%
! TACCCAAAACAAAGTTTATT+AGG - chr1_2:18067429-18067448 Msa0060380:intron 25.0%
! ACCCAAAACAAAGTTTATTA+GGG - chr1_2:18067430-18067449 Msa0060380:intron 25.0%
!!! TCCCTAATAAACTTTGTTTT+GGG + chr1_2:18067434-18067453 None:intergenic 25.0%
!!! ATCCCTAATAAACTTTGTTT+TGG + chr1_2:18067435-18067454 None:intergenic 25.0%
!! GAAATCTTTTAGTGATTTTG+AGG - chr1_2:18067499-18067518 Msa0060380:intron 25.0%
!!! AGTGATTTTGAGGTTAATTA+AGG - chr1_2:18067509-18067528 Msa0060380:intron 25.0%
!! AATTTCAAAATTTTCTTGCC+AGG - chr1_2:18067560-18067579 Msa0060380:CDS 25.0%
! TGGAATAATAATCTTCTTTG+GGG + chr1_2:18067607-18067626 None:intergenic 25.0%
! ACCTATATCAAATGTGTATA+AGG + chr1_2:18067633-18067652 None:intergenic 25.0%
! GAATTTCATAGAGAATATCA+AGG - chr1_2:18067730-18067749 Msa0060380:intron 25.0%
!! TGAGAGAATTGATTTATGTT+TGG - chr1_2:18067858-18067877 Msa0060380:intron 25.0%
! ACTAAAATAGACATAGGTAA+AGG - chr1_2:18067961-18067980 Msa0060380:intron 25.0%
! TGTAATTGTATTGTTTGGTT+TGG + chr1_2:18068248-18068267 None:intergenic 25.0%
!!! ACCGTATTTTTTTTGGATTT+TGG + chr1_2:18068642-18068661 None:intergenic 25.0%
! GGAGAAATCATAAACATAAA+TGG - chr1_2:18068861-18068880 Msa0060380:CDS 25.0%
! AACCATCTACTAGAATAATA+TGG - chr1_2:18068913-18068932 Msa0060380:CDS 25.0%
! ACCATCTACTAGAATAATAT+GGG - chr1_2:18068914-18068933 Msa0060380:CDS 25.0%
! AGAACAACTTTACATTCTAA+AGG - chr1_2:18069365-18069384 Msa0060380:CDS 25.0%
! AACAAGAATAATTCTCTGAA+AGG - chr1_2:18069454-18069473 Msa0060380:CDS 25.0%
!! AATCAATTTTCCCTTCATTT+TGG + chr1_2:18069502-18069521 None:intergenic 25.0%
! CATTTGTAATGATCTAATGA+AGG + chr1_2:18069566-18069585 None:intergenic 25.0%
!! TGAGAGAAATTTTGTTCATT+TGG + chr1_2:18069719-18069738 None:intergenic 25.0%
! GTCTATAAATAAAACACACT+AGG + chr1_2:18069838-18069857 None:intergenic 25.0%
!!! CCTTAAGTTTGATTTTATCA+TGG + chr1_2:18070010-18070029 None:intergenic 25.0%
! CCATGATAAAATCAAACTTA+AGG - chr1_2:18070007-18070026 Msa0060380:intron 25.0%
!! CCTAATGAAAAGTATAACTA+AGG + chr1_2:18070052-18070071 None:intergenic 25.0%
!! CCTTAGTTATACTTTTCATT+AGG - chr1_2:18070049-18070068 Msa0060380:intron 25.0%
!! TAGTCTGGTTTAATTCAAAA+CGG + chr1_2:18070152-18070171 None:intergenic 25.0%
! GTTTCAAAATGGTTCATTAA+CGG + chr1_2:18070187-18070206 None:intergenic 25.0%
!! TTAAATCGAACTCTATTTTC+TGG + chr1_2:18070451-18070470 None:intergenic 25.0%
!!! TCGATTTAAAATGTCGATTT+AGG - chr1_2:18070462-18070481 Msa0060380:intron 25.0%
!!! TTAAAATGTCGATTTAGGTT+TGG - chr1_2:18070467-18070486 Msa0060380:intron 25.0%
!!! TAAAATGTCGATTTAGGTTT+GGG - chr1_2:18070468-18070487 Msa0060380:intron 25.0%
! AAATTGGACAATATTGTTTG+TGG + chr1_2:18070560-18070579 None:intergenic 25.0%
!!! TTTGGTTTTCTTCCAAAAAT+TGG - chr1_2:18070604-18070623 Msa0060380:intron 25.0%
! TCGTTCATTAAATGAAAAGT+AGG + chr1_2:18070641-18070660 None:intergenic 25.0%
!!! ATTGAACAGTTGATGTATTT+TGG + chr1_2:18070771-18070790 None:intergenic 25.0%
!! GGTTTTTGTCAAAAAAAAAC+AGG + chr1_2:18071255-18071274 None:intergenic 25.0%
! ACGTTTCTTAGTTAAAAAGA+GGG + chr1_2:18071685-18071704 None:intergenic 25.0%
! TTTGTATCACTAAAATTTGG+TGG - chr1_2:18072219-18072238 Msa0060380:intron 25.0%
! CAAAAAAAATTGGACACATA+TGG + chr1_2:18072294-18072313 None:intergenic 25.0%
! TGTATTTAGTTAATCACCTT+TGG + chr1_2:18072381-18072400 None:intergenic 25.0%
! GTATTAAGTAGAAGAAAACT+TGG + chr1_2:18072420-18072439 None:intergenic 25.0%
! ATTCTTTGTAGCAAATATTG+GGG + chr1_2:18072676-18072695 None:intergenic 25.0%
! CAATTCTTTGTAGCAAATAT+TGG + chr1_2:18072678-18072697 None:intergenic 25.0%
!! ACATATTTTCATAGATCAAC+TGG - chr1_2:18072792-18072811 Msa0060380:intron 25.0%
!!! CGAATCATTATTGATTTCAT+AGG - chr1_2:18072831-18072850 Msa0060380:intron 25.0%
! TTAAGATATGGACTTAGATA+GGG + chr1_2:18067269-18067288 None:intergenic 25.0%
! ATTAAGATATGGACTTAGAT+AGG + chr1_2:18067270-18067289 None:intergenic 25.0%
! CCATTAGGTATAATACTATT+AGG + chr1_2:18073244-18073263 None:intergenic 25.0%
! CCTAATAGTATTATACCTAA+TGG - chr1_2:18073241-18073260 Msa0060380:intron 25.0%
! TACTGAATTTGAAGAGAAAA+TGG + chr1_2:18073277-18073296 None:intergenic 25.0%
!!! ATCTCTAATGAGATTTGTTT+TGG + chr1_2:18073323-18073342 None:intergenic 25.0%
! ACAAATCTCATTAGAGATAA+AGG - chr1_2:18073325-18073344 Msa0060380:intron 25.0%
!! TTCAAAATTTTCTTATCAGG+AGG - chr1_2:18073442-18073461 Msa0060380:intron 25.0%
! TTGGAAAAATAGTCTTCTTT+GGG + chr1_2:18073487-18073506 None:intergenic 25.0%
! ACCAATATCAAATGTGTATA+AGG + chr1_2:18073512-18073531 None:intergenic 25.0%
! ATTGGTCAAAATGATCTTAT+TGG - chr1_2:18073526-18073545 Msa0060380:CDS 25.0%
! CTAGAAATTACTCATGATAT+CGG + chr1_2:18074191-18074210 None:intergenic 25.0%
!!! TTTGAGATATTTTCAAGTGT+TGG - chr1_2:18074213-18074232 Msa0060380:intron 25.0%
!!! TTACTGTTTGTTTTGATTGA+CGG - chr1_2:18074686-18074705 Msa0060380:CDS 25.0%
! AAATGGTACAAAAATTGTTG+CGG - chr1_2:18074968-18074987 Msa0060380:five_prime_UTR 25.0%
TTGTATATGTTGAGCTTACA+TGG - chr1_2:18067159-18067178 Msa0060380:CDS 30.0%
AGTCCATATCTTAATTCTCT+TGG - chr1_2:18067275-18067294 Msa0060380:intron 30.0%
GTCCATATCTTAATTCTCTT+GGG - chr1_2:18067276-18067295 Msa0060380:intron 30.0%
CCATTAGGTATAATGTTGTT+AGG + chr1_2:18067356-18067375 None:intergenic 30.0%
CCTAACAACATTATACCTAA+TGG - chr1_2:18067353-18067372 Msa0060380:intron 30.0%
TTGAATGTACTGAATCTGAA+GGG + chr1_2:18067396-18067415 None:intergenic 30.0%
ATTGAATGTACTGAATCTGA+AGG + chr1_2:18067397-18067416 None:intergenic 30.0%
ACAAAGTTTATTAGGGATCA+AGG - chr1_2:18067437-18067456 Msa0060380:intron 30.0%
ATCAAATGTGTATAAGGCTT+TGG + chr1_2:18067627-18067646 None:intergenic 30.0%
GCCTTATACACATTTGATAT+AGG - chr1_2:18067629-18067648 Msa0060380:CDS 30.0%
ATATTCAAAGCTGAACCAAA+CGG + chr1_2:18067784-18067803 None:intergenic 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG - chr1_2:18068179-18068198 Msa0060380:intron 30.0%
!! CACTGTAGAGAATTGATTTT+GGG - chr1_2:18068202-18068221 Msa0060380:intron 30.0%
GGAAAATTGGCCAAAATTAA+AGG + chr1_2:18068460-18068479 None:intergenic 30.0%
CTTTATAGCAGATGGAAAAT+TGG + chr1_2:18068473-18068492 None:intergenic 30.0%
! CAATTTTCCATCTGCTATAA+AGG - chr1_2:18068471-18068490 Msa0060380:intron 30.0%
!!! TTTTGGAAAAGAGAGTACTT+AGG + chr1_2:18068625-18068644 None:intergenic 30.0%
!!! TTGTCTCACCGTATTTTTTT+TGG + chr1_2:18068649-18068668 None:intergenic 30.0%
AATGGTACAAACATTGTTGT+TGG - chr1_2:18068879-18068898 Msa0060380:CDS 30.0%
TCCCATATTATTCTAGTAGA+TGG + chr1_2:18068918-18068937 None:intergenic 30.0%
TCTACTAGAATAATATGGGA+TGG - chr1_2:18068918-18068937 Msa0060380:CDS 30.0%
CAAGTTTATTGGAACAATCA+TGG - chr1_2:18069184-18069203 Msa0060380:intron 30.0%
TTTATTGGAACAATCATGGA+AGG - chr1_2:18069188-18069207 Msa0060380:intron 30.0%
!!! TGGCAACTTTAGTTTTTACT+TGG - chr1_2:18069261-18069280 Msa0060380:CDS 30.0%
!!! TTTAGTTTTTACTTGGCCTT+GGG - chr1_2:18069268-18069287 Msa0060380:CDS 30.0%
TCATCAAAACCAAAAACTAG+AGG + chr1_2:18069331-18069350 None:intergenic 30.0%
!! TAGAATCGATTTGACTACAA+TGG + chr1_2:18069632-18069651 None:intergenic 30.0%
AACAAAATTTCTCTCATGAC+CGG - chr1_2:18069723-18069742 Msa0060380:intron 30.0%
! AGCATGCACATCATATTTTA+TGG - chr1_2:18069861-18069880 Msa0060380:intron 30.0%
CTTAAATACACAGTTCCTTA+CGG - chr1_2:18069898-18069917 Msa0060380:intron 30.0%
CGACCATTAAATTAACAGTT+TGG + chr1_2:18070110-18070129 None:intergenic 30.0%
! AATTCAAAACGGTTTGTTCA+TGG + chr1_2:18070141-18070160 None:intergenic 30.0%
!!! CTCAGTTGTGTTTTTTTGTA+TGG + chr1_2:18070416-18070435 None:intergenic 30.0%
!! AAAATGTCGATTTAGGTTTG+GGG - chr1_2:18070469-18070488 Msa0060380:intron 30.0%
CTGAATCATAAACTCTTGTT+CGG - chr1_2:18070518-18070537 Msa0060380:intron 30.0%
GACAATATTGTTTGTGGTTT+AGG + chr1_2:18070554-18070573 None:intergenic 30.0%
ATTAAATGAAAAGTAGGCCT+GGG + chr1_2:18070635-18070654 None:intergenic 30.0%
TTGTTTATGATTGAGACCAA+AGG - chr1_2:18070810-18070829 Msa0060380:intron 30.0%
TGTTTATGATTGAGACCAAA+GGG - chr1_2:18070811-18070830 Msa0060380:intron 30.0%
ATCAATCAACTTTCCATTGA+CGG + chr1_2:18070856-18070875 None:intergenic 30.0%
TGTCTTTCAATCGATTAAGA+AGG - chr1_2:18070901-18070920 Msa0060380:intron 30.0%
GTCAAAAAAAAACAGGTTTG+AGG + chr1_2:18071248-18071267 None:intergenic 30.0%
CTCTCGTATTTCTTCATTTA+TGG + chr1_2:18071392-18071411 None:intergenic 30.0%
TATCTGCAATCAGTAGTTAA+TGG - chr1_2:18071420-18071439 Msa0060380:intron 30.0%
CACGTTTCTTAGTTAAAAAG+AGG + chr1_2:18071686-18071705 None:intergenic 30.0%
GTTGCCATAATGAAGAAATA+TGG + chr1_2:18071822-18071841 None:intergenic 30.0%
TAACTGCCGAATTATAAAAC+CGG + chr1_2:18072063-18072082 None:intergenic 30.0%
! TATCACTAAAATTTGGTGGA+AGG - chr1_2:18072223-18072242 Msa0060380:intron 30.0%
TTAATCACCTTTGGTTGAAA+AGG + chr1_2:18072372-18072391 None:intergenic 30.0%
GATCATATCATATAGTCCAT+AGG - chr1_2:18072557-18072576 Msa0060380:intron 30.0%
ATGAATTTCATGAAGCACAA+AGG + chr1_2:18072585-18072604 None:intergenic 30.0%
TTTGTGCTTCATGAAATTCA+TGG - chr1_2:18072584-18072603 Msa0060380:intron 30.0%
TTCTTTGTAGCAAATATTGG+GGG + chr1_2:18072675-18072694 None:intergenic 30.0%
TGAAAATATGTCTCTCCATA+TGG + chr1_2:18072783-18072802 None:intergenic 30.0%
TAGAACTCTCAAATAGAGTT+TGG + chr1_2:18072881-18072900 None:intergenic 30.0%
GTCTACTTGGAGAAAAATAA+TGG + chr1_2:18072953-18072972 None:intergenic 30.0%
GTATGTATTCTATGGAAGTT+TGG + chr1_2:18072996-18073015 None:intergenic 30.0%
TGTTATCGGTATGTATTCTA+TGG + chr1_2:18073004-18073023 None:intergenic 30.0%
TCACAGTATTACAATACTGA+AGG - chr1_2:18073057-18073076 Msa0060380:intron 30.0%
AGTCCATATCTTAATTCTCT+TGG - chr1_2:18067275-18067294 Msa0060380:intron 30.0%
GTCCATATCTTAATTCTCTT+GGG - chr1_2:18067276-18067295 Msa0060380:intron 30.0%
!! AATGGACTAAATATCCCATT+AGG + chr1_2:18073259-18073278 None:intergenic 30.0%
AAAGATATCAACGAGAACAA+CGG + chr1_2:18073367-18073386 None:intergenic 30.0%
! TTGTTCTCGTTGATATCTTT+TGG - chr1_2:18073367-18073386 Msa0060380:intron 30.0%
!! GGTGATTTCGAGTTTAATTA+AGG - chr1_2:18073388-18073407 Msa0060380:intron 30.0%
TGGAAAAATAGTCTTCTTTG+GGG + chr1_2:18073486-18073505 None:intergenic 30.0%
GTTGGAAAAATAGTCTTCTT+TGG + chr1_2:18073488-18073507 None:intergenic 30.0%
GCCTTATACACATTTGATAT+TGG - chr1_2:18067629-18067648 Msa0060380:CDS 30.0%
!! GATCTTATTGGTGGTTATTT+TGG - chr1_2:18073538-18073557 Msa0060380:CDS 30.0%
!! CAATTTCATAGAGAGTATCA+AGG - chr1_2:18073609-18073628 Msa0060380:CDS 30.0%
TTATTTAGACACTATAGTCG+AGG - chr1_2:18073790-18073809 Msa0060380:intron 30.0%
ACTGATGAAATGAAACTTGT+TGG - chr1_2:18074359-18074378 Msa0060380:intron 30.0%
ATATATACAATTTAGGGGCT+AGG - chr1_2:18074391-18074410 Msa0060380:CDS 30.0%
TAATTTCCCATCTGCAATAA+AGG - chr1_2:18074467-18074486 Msa0060380:CDS 30.0%
AACTATCCTTTATTGCAGAT+GGG + chr1_2:18074476-18074495 None:intergenic 30.0%
TAACTATCCTTTATTGCAGA+TGG + chr1_2:18074477-18074496 None:intergenic 30.0%
TCTGCAATAAAGGATAGTTA+TGG - chr1_2:18074477-18074496 Msa0060380:CDS 30.0%
!!! TTTTGAAAAAGGGAGTACTT+AGG + chr1_2:18074621-18074640 None:intergenic 30.0%
GGAGCAACTATAAACATAAA+TGG - chr1_2:18074951-18074970 Msa0060380:five_prime_UTR 30.0%
AATGGTACAAAAATTGTTGC+GGG - chr1_2:18074969-18074988 Msa0060380:five_prime_UTR 30.0%
GACCCAAGAGAATTAAGATA+TGG + chr1_2:18067281-18067300 None:intergenic 35.0%
! CTTGGGTCAAATTTTACACA+TGG - chr1_2:18067293-18067312 Msa0060380:intron 35.0%
!! AATGGACTGAACATTCCATT+AGG + chr1_2:18067371-18067390 None:intergenic 35.0%
TACTGAATCTGAAGGGAAAA+TGG + chr1_2:18067389-18067408 None:intergenic 35.0%
! TTCAAAATTTTCTTGCCAGG+AGG - chr1_2:18067563-18067582 Msa0060380:CDS 35.0%
! GATCTTACTGCTGGATTTTT+CGG - chr1_2:18067659-18067678 Msa0060380:CDS 35.0%
TATTCAAAGCTGAACCAAAC+GGG + chr1_2:18067783-18067802 None:intergenic 35.0%
AAACCTATACACGTTGTTCA+AGG - chr1_2:18068055-18068074 Msa0060380:intron 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG - chr1_2:18068086-18068105 Msa0060380:intron 35.0%
!! TGAACCAAACACGTTGTTTT+TGG - chr1_2:18068163-18068182 Msa0060380:intron 35.0%
!! GCACTGTAGAGAATTGATTT+TGG - chr1_2:18068201-18068220 Msa0060380:intron 35.0%
ATATATACAAATTAGGGGCC+AGG - chr1_2:18068395-18068414 Msa0060380:intron 35.0%
! TCATTTTGGATACACAACAC+TGG - chr1_2:18068418-18068437 Msa0060380:intron 35.0%
! ATTAAAGGCACACATCCAAT+TGG + chr1_2:18068445-18068464 None:intergenic 35.0%
!! TGGATGTGTGCCTTTAATTT+TGG - chr1_2:18068447-18068466 Msa0060380:intron 35.0%
GTTAGGGTATATTTGGATTG+CGG - chr1_2:18068691-18068710 Msa0060380:intron 35.0%
TATAACATTCGTGCTAGATG+TGG - chr1_2:18068840-18068859 Msa0060380:CDS 35.0%
TTGTAACATGCCCTATTTAG+TGG + chr1_2:18069020-18069039 None:intergenic 35.0%
!!! TGGTTTTGTAGCAACCTTTT+TGG - chr1_2:18069136-18069155 Msa0060380:intron 35.0%
TCTAGAAGTTGGCAAATATG+CGG + chr1_2:18069219-18069238 None:intergenic 35.0%
!! GTAAACATAGCTCTAGAAGT+TGG + chr1_2:18069230-18069249 None:intergenic 35.0%
!!! CTTTAGTTTTTACTTGGCCT+TGG - chr1_2:18069267-18069286 Msa0060380:CDS 35.0%
CATTGTTCTTCAAACCACTT+TGG + chr1_2:18069307-18069326 None:intergenic 35.0%
!!! GAACAATGACCTCTAGTTTT+TGG - chr1_2:18069319-18069338 Msa0060380:CDS 35.0%
!! CTCTGAAAGGTTTTTACAGA+AGG - chr1_2:18069467-18069486 Msa0060380:CDS 35.0%
! GAAAGGTTTTTACAGAAGGA+AGG - chr1_2:18069471-18069490 Msa0060380:intron 35.0%
ATGAGATTCAAAGAGTAGCT+AGG - chr1_2:18069778-18069797 Msa0060380:intron 35.0%
TGAGATTCAAAGAGTAGCTA+GGG - chr1_2:18069779-18069798 Msa0060380:intron 35.0%
! TCCAATTTTCCTGAACCATT+AGG - chr1_2:18070572-18070591 Msa0060380:intron 35.0%
TCCTAATGGTTCAGGAAAAT+TGG + chr1_2:18070576-18070595 None:intergenic 35.0%
! ATTTTCCTGAACCATTAGGA+TGG - chr1_2:18070576-18070595 Msa0060380:intron 35.0%
CATTAAATGAAAAGTAGGCC+TGG + chr1_2:18070636-18070655 None:intergenic 35.0%
TGAACGATTTCAAAGTCAAC+AGG - chr1_2:18070654-18070673 Msa0060380:intron 35.0%
!! ACCAAAGGGAGTATTAAAGA+TGG - chr1_2:18070825-18070844 Msa0060380:intron 35.0%
TCCATCTTTAATACTCCCTT+TGG + chr1_2:18070829-18070848 None:intergenic 35.0%
GAAGGACTTTCACAAGAATT+TGG - chr1_2:18070919-18070938 Msa0060380:intron 35.0%
CTAAACTGTGAGATACACAA+TGG + chr1_2:18071027-18071046 None:intergenic 35.0%
! AAAGACGTTTTTACCCCTTT+CGG - chr1_2:18071114-18071133 Msa0060380:intron 35.0%
TAACTGCCGAATTATGAAAC+CGG - chr1_2:18071141-18071160 Msa0060380:intron 35.0%
TTAACTACCGAGGAAAACTT+CGG - chr1_2:18071170-18071189 Msa0060380:intron 35.0%
CTGAGGAAATCTGAAAACTT+CGG - chr1_2:18071203-18071222 Msa0060380:intron 35.0%
CCGAGGAAAATTGAAAACTT+CGG + chr1_2:18072001-18072020 None:intergenic 35.0%
! CCGAAGTTTTCAATTTTCCT+CGG - chr1_2:18071998-18072017 Msa0060380:intron 35.0%
TTAACTACCGAGGAAAACTT+CGG + chr1_2:18071170-18071189 None:intergenic 35.0%
! AAAAGACGTTTTTACCCCTT+CGG + chr1_2:18071113-18071132 None:intergenic 35.0%
! TGTTTGACCTTTTCAACCAA+AGG - chr1_2:18072362-18072381 Msa0060380:intron 35.0%
TGGCAAAATTTGAGCTTCTT+AGG - chr1_2:18072604-18072623 Msa0060380:intron 35.0%
! TTTCCTGCCATATTTAGCTT+TGG - chr1_2:18072702-18072721 Msa0060380:intron 35.0%
! TGAAGCACCAAAGCTAAATA+TGG + chr1_2:18072712-18072731 None:intergenic 35.0%
!! GATGTGTTGAGGTTTGTTAT+CGG + chr1_2:18073018-18073037 None:intergenic 35.0%
AAGCTATATGTGATGTGTTG+AGG + chr1_2:18073029-18073048 None:intergenic 35.0%
GACCCAAGAGAATTAAGATA+TGG + chr1_2:18067281-18067300 None:intergenic 35.0%
ATCAAATGTGTATAAGGCGT+TGG + chr1_2:18073506-18073525 None:intergenic 35.0%
GGTCAAAATGATCTTATTGG+TGG - chr1_2:18073529-18073548 Msa0060380:CDS 35.0%
CATAAGAACGATGATGATTG+TGG + chr1_2:18073972-18073991 None:intergenic 35.0%
CGTTCTTATGAGTAAGATTG+TGG - chr1_2:18073982-18074001 Msa0060380:intron 35.0%
TCGTTAACCACTCATTAAAG+TGG - chr1_2:18074240-18074259 Msa0060380:intron 35.0%
CGTTAACCACTCATTAAAGT+GGG - chr1_2:18074241-18074260 Msa0060380:intron 35.0%
! TCATTTTGGATACACAACAC+AGG - chr1_2:18068418-18068437 Msa0060380:intron 35.0%
! CATTTTGGATACACAACACA+GGG - chr1_2:18074415-18074434 Msa0060380:CDS 35.0%
TGGAAGCTTGATTAACATGT+AGG - chr1_2:18074864-18074883 Msa0060380:five_prime_UTR 35.0%
! GGAAAGTACAACATTCATGT+TGG - chr1_2:18074924-18074943 Msa0060380:five_prime_UTR 35.0%
TACAACATTCATGTTGGATG+TGG - chr1_2:18074930-18074949 Msa0060380:five_prime_UTR 35.0%
ACCCATCTACTAGAATCATT+TGG - chr1_2:18075003-18075022 Msa0060380:five_prime_UTR 35.0%
CCCAAATGATTCTAGTAGAT+GGG + chr1_2:18075007-18075026 None:intergenic 35.0%
CCCATCTACTAGAATCATTT+GGG - chr1_2:18075004-18075023 Msa0060380:five_prime_UTR 35.0%
TCCCAAATGATTCTAGTAGA+TGG + chr1_2:18075008-18075027 None:intergenic 35.0%
TCTACTAGAATCATTTGGGA+TGG - chr1_2:18075008-18075027 Msa0060380:five_prime_UTR 35.0%
GTCTTTGATCAAATCTCTAC+TGG - chr1_2:18068972-18068991 Msa0060380:intron 35.0%
! TCCTCCTATTTCTCTAGATA+TGG - chr1_2:18075097-18075116 Msa0060380:five_prime_UTR 35.0%
CATGCCATATCTAGAGAAAT+AGG + chr1_2:18075104-18075123 None:intergenic 35.0%
AATGTTGCAAATACACCTCC+TGG + chr1_2:18067581-18067600 None:intergenic 40.0%
GGTCAAAATGATCTTACTGC+TGG - chr1_2:18067650-18067669 Msa0060380:CDS 40.0%
AACGGGCACATAGCAAAAAT+GGG + chr1_2:18067766-18067785 None:intergenic 40.0%
AAACGGGCACATAGCAAAAA+TGG + chr1_2:18067767-18067786 None:intergenic 40.0%
!! ATTTTTGCTATGTGCCCGTT+TGG - chr1_2:18067766-18067785 Msa0060380:intron 40.0%
TCTCCTTGAACAACGTGTAT+AGG + chr1_2:18068061-18068080 None:intergenic 40.0%
AGCTAGGATTTGTAGCTTCA+TGG - chr1_2:18068102-18068121 Msa0060380:intron 40.0%
! GCTTCATGGAGAATTGCTTT+TGG - chr1_2:18068116-18068135 Msa0060380:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG - chr1_2:18068119-18068138 Msa0060380:intron 40.0%
CTAGCCAAAAACAACGTGTT+TGG + chr1_2:18068170-18068189 None:intergenic 40.0%
GTTGTGTATCCAAAATGACC+TGG + chr1_2:18068416-18068435 None:intergenic 40.0%
ATACACAACACTGGACCAAT+TGG - chr1_2:18068427-18068446 Msa0060380:intron 40.0%
TGGCTATCCTTTATAGCAGA+TGG + chr1_2:18068481-18068500 None:intergenic 40.0%
TCTGCTATAAAGGATAGCCA+AGG - chr1_2:18068481-18068500 Msa0060380:intron 40.0%
TGTATTGCTTTGCACAACCT+TGG + chr1_2:18068501-18068520 None:intergenic 40.0%
ACATATGTGATTGCAGCTAG+TGG + chr1_2:18068589-18068608 None:intergenic 40.0%
ATCCTCCCATTCCACTAAAT+AGG - chr1_2:18069006-18069025 Msa0060380:intron 40.0%
TCCTCCCATTCCACTAAATA+GGG - chr1_2:18069007-18069026 Msa0060380:intron 40.0%
CATGCCCTATTTAGTGGAAT+GGG + chr1_2:18069014-18069033 None:intergenic 40.0%
ACATGCCCTATTTAGTGGAA+TGG + chr1_2:18069015-18069034 None:intergenic 40.0%
TTGGAACAATCATGGAAGGT+AGG - chr1_2:18069192-18069211 Msa0060380:intron 40.0%
CTAGAAGTTGGCAAATATGC+GGG + chr1_2:18069218-18069237 None:intergenic 40.0%
GAAGGTGAGACCAAAATGAA+GGG - chr1_2:18069489-18069508 Msa0060380:intron 40.0%
!! CTTTGAAGCTCCATTCGATT+TGG + chr1_2:18069755-18069774 None:intergenic 40.0%
CGGTTCGACTAAAAATAGTC+TGG + chr1_2:18070167-18070186 None:intergenic 40.0%
AACACAACTGAGTTCGCAAA+AGG - chr1_2:18070424-18070443 Msa0060380:intron 40.0%
ATCAACTTTCCATTGACGGT+CGG + chr1_2:18070852-18070871 None:intergenic 40.0%
! TGCTGTTGACACATTAGCTT+TGG - chr1_2:18071075-18071094 Msa0060380:intron 40.0%
!! TTGACACATTAGCTTTGGCT+AGG - chr1_2:18071080-18071099 Msa0060380:intron 40.0%
! TTAACTGCCGAAGTTTTCCT+CGG + chr1_2:18071180-18071199 None:intergenic 40.0%
! AAACAGGTTTGAGGTTTCCT+CGG + chr1_2:18071965-18071984 None:intergenic 40.0%
! TTTACTGCCGAAGTTTTCCT+CGG - chr1_2:18072024-18072043 Msa0060380:intron 40.0%
!! CTGCAGCCGGTTTTATAATT+CGG - chr1_2:18072054-18072073 Msa0060380:intron 40.0%
!! TTGACACATTAGCTTTGGCT+AGG + chr1_2:18071080-18071099 None:intergenic 40.0%
! TGCTGTTGACACATTAGCTT+TGG + chr1_2:18071075-18071094 None:intergenic 40.0%
ATGAAGCACAAAGGAACCTA+TGG + chr1_2:18072576-18072595 None:intergenic 40.0%
AGCACAATCAAAGACACAAG+TGG + chr1_2:18072636-18072655 None:intergenic 40.0%
TATGTCTCTCCATATGGAGA+AGG + chr1_2:18072777-18072796 None:intergenic 40.0%
TCAACTGGAAGATACTCTGA+TGG - chr1_2:18072807-18072826 Msa0060380:intron 40.0%
AAGTACTTGAGAGGTCTACT+TGG + chr1_2:18072966-18072985 None:intergenic 40.0%
GGATCTTCTAAGTACTTGAG+AGG + chr1_2:18072975-18072994 None:intergenic 40.0%
GTAATTTCAGCACAGAGCTT+TGG - chr1_2:18073127-18073146 Msa0060380:CDS 40.0%
! TGGGTATTGTGAGTTGTCAT+TGG + chr1_2:18073933-18073952 None:intergenic 40.0%
! ATTTAGGGGCTAGGTCATTT+TGG - chr1_2:18074400-18074419 Msa0060380:CDS 40.0%
GGGAAATTAGCCAAAATCGT+AGG + chr1_2:18074456-18074475 None:intergenic 40.0%
GCCATATCTAGAGAAATAGG+AGG + chr1_2:18075101-18075120 None:intergenic 40.0%
! AATTAGGGGCCAGGTCATTT+TGG - chr1_2:18068404-18068423 Msa0060380:intron 45.0%
ATCCACACGAAGTTGAGCTA+GGG + chr1_2:18068563-18068582 None:intergenic 45.0%
AGGATTTGAGCTACCACATG+TGG - chr1_2:18068788-18068807 Msa0060380:CDS 45.0%
GGATGGTACACATTACACAG+AGG - chr1_2:18068935-18068954 Msa0060380:CDS 45.0%
GCGTTACTGTTGAACCAAAG+TGG - chr1_2:18069290-18069309 Msa0060380:CDS 45.0%
GGAAGGTGAGACCAAAATGA+AGG - chr1_2:18069488-18069507 Msa0060380:intron 45.0%
!! CCATTCGATTTGGCTAACAC+CGG + chr1_2:18069745-18069764 None:intergenic 45.0%
CCTGAACCATTAGGATGGTT+CGG - chr1_2:18070581-18070600 Msa0060380:intron 45.0%
!! ACCATTAGGATGGTTCGGTT+TGG - chr1_2:18070586-18070605 Msa0060380:intron 45.0%
ACCAAACCGAACCATCCTAA+TGG + chr1_2:18070590-18070609 None:intergenic 45.0%
AACAGGCGTATTACTCTCTC+TGG - chr1_2:18070671-18070690 Msa0060380:intron 45.0%
TCGGCAGTTAACTACCGAAA+GGG + chr1_2:18071131-18071150 None:intergenic 45.0%
TTCGGCAGTTAACTACCGAA+AGG + chr1_2:18072072-18072091 None:intergenic 45.0%
! CTGCAGCCGGTTTCATAATT+CGG + chr1_2:18071150-18071169 None:intergenic 45.0%
ATTCGGCAGTTAACTACCGA+AGG - chr1_2:18072071-18072090 Msa0060380:intron 45.0%
TTCGGCAGTTAACTACCGAA+GGG - chr1_2:18072072-18072091 Msa0060380:intron 45.0%
TGTCATGCTCTAGCCAAATG+TGG - chr1_2:18072247-18072266 Msa0060380:intron 45.0%
TGTATCAAGCGTGCCACATT+TGG + chr1_2:18072263-18072282 None:intergenic 45.0%
GCACCAAAGCTAAATATGGC+AGG + chr1_2:18072708-18072727 None:intergenic 45.0%
AAACGTTGACACTGGTGGTT+TGG - chr1_2:18072731-18072750 Msa0060380:intron 45.0%
CTTGGGTCTAACTTCACACA+TGG - chr1_2:18073181-18073200 Msa0060380:CDS 45.0%
TGACAACTCACAATACCCAC+TGG - chr1_2:18073934-18073953 Msa0060380:intron 45.0%
GACAACTCACAATACCCACT+GGG - chr1_2:18073935-18073954 Msa0060380:intron 45.0%
TGGATTTCTACACTCCCAGT+GGG + chr1_2:18073952-18073971 None:intergenic 45.0%
CTACTGCCCACTTTAATGAG+TGG + chr1_2:18074250-18074269 None:intergenic 45.0%
! TGGTTGCACTCCTACGATTT+TGG - chr1_2:18074443-18074462 Msa0060380:CDS 45.0%
ATCGCTACGAAGTTGAGCTA+GGG + chr1_2:18074559-18074578 None:intergenic 45.0%
ACATATGCGATTGCAGCAAG+AGG + chr1_2:18074585-18074604 None:intergenic 45.0%
GTTAGCTGTCTCTGTGAAGT+GGG + chr1_2:18075036-18075055 None:intergenic 45.0%
TGTTAGCTGTCTCTGTGAAG+TGG + chr1_2:18075037-18075056 None:intergenic 45.0%
!! TTTATTAATATATATAACAA+GGG + chr1_2:18068352-18068371 None:intergenic 5.0%
!!! TTTTATTAATATATATAACA+AGG + chr1_2:18068353-18068372 None:intergenic 5.0%
!! TAAAGAATTAAATTTAATTA+AGG + chr1_2:18071895-18071914 None:intergenic 5.0%
!!! TTAATTCTTTAATTATTTTA+TGG + chr1_2:18071886-18071905 None:intergenic 5.0%
!! TAAAGAATTAAATTTAATTA+AGG - chr1_2:18071895-18071914 Msa0060380:intron 5.0%
GGTGCAAACTTTGCAACAGC+AGG - chr1_2:18067314-18067333 Msa0060380:intron 50.0%
GATCCACACGAAGTTGAGCT+AGG + chr1_2:18068564-18068583 None:intergenic 50.0%
CTACCACATGTGGCATGTTG+TGG - chr1_2:18068798-18068817 Msa0060380:CDS 50.0%
TAGCCACAACATGCCACATG+TGG + chr1_2:18068804-18068823 None:intergenic 50.0%
CATGTGGCATGTTGTGGCTA+TGG - chr1_2:18068804-18068823 Msa0060380:CDS 50.0%
GCCCTATTTAGTGGAATGGG+AGG + chr1_2:18069011-18069030 None:intergenic 50.0%
TGGTTCAACAGTAACGCCCA+AGG + chr1_2:18069287-18069306 None:intergenic 50.0%
! CCGGTGTTAGCCAAATCGAA+TGG - chr1_2:18069742-18069761 Msa0060380:intron 50.0%
CACAGTTCCTTACGGTGTAC+CGG - chr1_2:18069906-18069925 Msa0060380:intron 50.0%
ACAGTTCCTTACGGTGTACC+GGG - chr1_2:18069907-18069926 Msa0060380:intron 50.0%
AAGAAACCCGGTACACCGTA+AGG + chr1_2:18069916-18069935 None:intergenic 50.0%
CCGAACCATCCTAATGGTTC+AGG + chr1_2:18070584-18070603 None:intergenic 50.0%
TCCAAAAATTGGACCAGCCC+AGG - chr1_2:18070615-18070634 Msa0060380:intron 50.0%
AATGAAAAGTAGGCCTGGGC+TGG + chr1_2:18070631-18070650 None:intergenic 50.0%
AAAGATGGACCGACCGTCAA+TGG - chr1_2:18070840-18070859 Msa0060380:intron 50.0%
CGGCAGTTAACTACCGAAAG+GGG + chr1_2:18071130-18071149 None:intergenic 50.0%
ACTTCGGCAGTTAACTGCTG+AGG - chr1_2:18071186-18071205 Msa0060380:intron 50.0%
ACTTCGGCAATTAACTGCCG+AGG - chr1_2:18071219-18071238 Msa0060380:intron 50.0%
ACTTCGGCAATTAACTGCCG+AGG + chr1_2:18071219-18071238 None:intergenic 50.0%
ACTTCGGCAGTAAACTACCG+AGG + chr1_2:18072018-18072037 None:intergenic 50.0%
TCGGCAGTTAACTACCGAAG+GGG - chr1_2:18072073-18072092 Msa0060380:intron 50.0%
GGCACGCTTGATACACATCA+TGG - chr1_2:18072268-18072287 Msa0060380:intron 50.0%
GGTGCTTCAAACGTTGACAC+TGG - chr1_2:18072723-18072742 Msa0060380:intron 50.0%
GCTTCAAACGTTGACACTGG+TGG - chr1_2:18072726-18072745 Msa0060380:intron 50.0%
TGGAGAAGGTGGTGCTTGAA+AGG + chr1_2:18072763-18072782 None:intergenic 50.0%
CAAGCACCACCTTCTCCATA+TGG - chr1_2:18072765-18072784 Msa0060380:intron 50.0%
GTCTCTCCATATGGAGAAGG+TGG + chr1_2:18072774-18072793 None:intergenic 50.0%
CATGGTGCAAACTTCGCAAC+AGG - chr1_2:18073199-18073218 Msa0060380:CDS 50.0%
GTGGATTTCTACACTCCCAG+TGG + chr1_2:18073953-18073972 None:intergenic 50.0%
ATACACAACACAGGGCCAAG+TGG - chr1_2:18074423-18074442 Msa0060380:CDS 50.0%
! ATCGTAGGAGTGCAACCACT+TGG + chr1_2:18074441-18074460 None:intergenic 50.0%
GATCGCTACGAAGTTGAGCT+AGG + chr1_2:18074560-18074579 None:intergenic 50.0%
AGGATTTGAGCTTCCACACG+TGG - chr1_2:18074884-18074903 Msa0060380:five_prime_UTR 50.0%
AGCCCTAGCTCAACTTCGTG+TGG - chr1_2:18068558-18068577 Msa0060380:CDS 55.0%
GTGGCATGTTGTGGCTATGG+AGG - chr1_2:18068807-18068826 Msa0060380:CDS 55.0%
!!! GCCTGGGCTGGTCCAATTTT+TGG + chr1_2:18070619-18070638 None:intergenic 55.0%
CCTCGGTAGTTAACTGCAGC+CGG + chr1_2:18072041-18072060 None:intergenic 55.0%
CCTCGGTAGTTAACTGCAGC+CGG - chr1_2:18072041-18072060 Msa0060380:intron 55.0%
GGTGCAAACTTCGCAACAGG+AGG - chr1_2:18073202-18073221 Msa0060380:CDS 55.0%
CTTCCACACGTGGCATGTTG+TGG - chr1_2:18074894-18074913 Msa0060380:five_prime_UTR 55.0%
TAGCCACAACATGCCACGTG+TGG + chr1_2:18074900-18074919 None:intergenic 55.0%
CACGTGGCATGTTGTGGCTA+TGG - chr1_2:18074900-18074919 Msa0060380:five_prime_UTR 55.0%
GTGGCATGTTGTGGCTATGG+AGG - chr1_2:18068807-18068826 Msa0060380:CDS 55.0%
CCGGCTGCAGTTAACTACCG+AGG - chr1_2:18071160-18071179 Msa0060380:intron 60.0%
CCGGCTGCAGTTAACTACCG+AGG + chr1_2:18071160-18071179 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 18066980 18075133 18066980 ID=Msa0060380;Name=Msa0060380
chr1_2 mRNA 18066980 18075133 18066980 ID=Msa0060380-mRNA-1;Parent=Msa0060380;Name=Msa0060380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=397|0.5|0.33|1|0.75|0.44|9|0|568
chr1_2 exon 18066980 18067219 18066980 ID=Msa0060380-mRNA-1:exon:7052;Parent=Msa0060380-mRNA-1
chr1_2 exon 18067511 18067723 18067511 ID=Msa0060380-mRNA-1:exon:7051;Parent=Msa0060380-mRNA-1
chr1_2 exon 18068483 18068652 18068483 ID=Msa0060380-mRNA-1:exon:7050;Parent=Msa0060380-mRNA-1
chr1_2 exon 18068767 18068976 18068767 ID=Msa0060380-mRNA-1:exon:7049;Parent=Msa0060380-mRNA-1
chr1_2 exon 18069261 18069487 18069261 ID=Msa0060380-mRNA-1:exon:7048;Parent=Msa0060380-mRNA-1
chr1_2 exon 18073071 18073256 18073071 ID=Msa0060380-mRNA-1:exon:7047;Parent=Msa0060380-mRNA-1
chr1_2 exon 18073487 18073719 18073487 ID=Msa0060380-mRNA-1:exon:7046;Parent=Msa0060380-mRNA-1
chr1_2 exon 18074389 18074531 18074389 ID=Msa0060380-mRNA-1:exon:7045;Parent=Msa0060380-mRNA-1
chr1_2 exon 18074655 18075133 18074655 ID=Msa0060380-mRNA-1:exon:7044;Parent=Msa0060380-mRNA-1
chr1_2 five_prime_UTR 18074737 18075133 18074737 ID=Msa0060380-mRNA-1:five_prime_utr;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18074655 18074736 18074655 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18074389 18074531 18074389 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18073487 18073719 18073487 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18073071 18073256 18073071 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18069261 18069487 18069261 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18068767 18068976 18068767 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18068483 18068652 18068483 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18067511 18067723 18067511 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
chr1_2 CDS 18066980 18067219 18066980 ID=Msa0060380-mRNA-1:cds;Parent=Msa0060380-mRNA-1
Gene Sequence

>Msa0060380

ATGTTCAGTCCATTTTCCCTTCAGATTCAGTACATTCAATTCAAAGATTTCATACCCAAAACAAAGTTTATTAGGGATCAAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTATTCCAAAGCCTTATACACATTTGATATAGGTCAAAATGATCTTACTGCTGGATTTTTCGGTAATAAGACTATACAACAAGTCAACGCTACTGTGCCCGATATAAATATATACAAATTAGGGGCCAGGTCATTTTGGATACACAACACTGGACCAATTGGATGTGTGCCTTTAATTTTGGCCAATTTTCCATCTGCTATAAAGGATAGCCAAGGTTGTGCAAAGCAATACAATGAAGTATCTCAATATTTTAATTTAAAGTTGAAGGAAGCCCTAGCTCAACTTCGTGTGGATCTTCCACTAGCTGCAATCACATATGTTGATATCTACTCTCCTAAATGTGGAGAAATCATAAACATAAATGGTACAAACATTGTTGTTGGTTCATGTAAAAAACCATCTACTAGAATAATATGGGATGGTACACATTACACAGAGGCAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGAAGCTTTTACAAATCCTCCCATTCCACTAAATAGGGCATGTTACAAAAAGCACATGCCACTTGTGTCTTTGATTGTGCTTATTTTATGTTCTACACCCCCAATATTTGCTACAAAGAATTGTGATTTTCCTGCCATATTTAGCTTTGGTGCTTCAAACGTTGACACTGGTGGTTTGGCTGCTGCCTTTCAAGCACCACCTTCTCCATATGGAGAGACATATTTTCATAGATCAACTGGAAGATACTCTGATGGTCGAATCATTATTGATTTCATAGCACAGAGCTTTGGACTTCCCTATCTAAGTCCATATCTTAATTCTCTTGGGTCTAACTTCACACATGGTGCAAACTTCGCAACAGGAGGATCAACAATCAATATTCCTAATAGTATTATACCTAATGGGATATTTAGTCCATTTTCTCTTCAAATTCAGTACATTCAATTCAAAGATTTCATATCCAAAACAAATCTCATTAGAGATAAAGGAGGTGTATTTGCAACGTTGATCCCCAAAGAAGACTATTTTTCCAACGCCTTATACACATTTGATATTGGTCAAAATGATCTTATTGGTGGTTATTTTGGTAATGCGACTATAAAACAAGTCAATGCTACTGTACCCGATATAGTAAACAATTTCATAGAGAGTATCAAGAATATATACAATTTAGGGGCTAGGTCATTTTGGATACACAACACAGGGCCAAGTGGTTGCACTCCTACGATTTTGGCTAATTTCCCATCTGCAATAAAGGATAGTTATGGTTGTGCAAAGCAACACAATGAAGTATCTCAGTATTTTAATTTAAAGTTGAAGGAAGCCCTAGCTCAACTTCGTAGCGATCTTCCTCTTGCTGCAATCGCATATCTTCCACACGTGGCATGTTGTGGCTATGGAGGAAAGTACAACATTCATGTTGGATGTGGAGCAACTATAAACATAAATGGTACAAAAATTGTTGCGGGTTCATGTAAAAACCCATCTACTAGAATCATTTGGGATGGTTCCCACTTCACAGAGACAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGGAGCTTTCAATGATCCTCCTATTTCTCTAGATATGGCATGTTATAGAAAG

Protein sequence

>Msa0060380

MFSPFSLQIQYIQFKDFIPKTKFIRDQGGVFATLIPKEDYYSKALYTFDIGQNDLTAGFFGNKTIQQVNATVPDINIYKLGARSFWIHNTGPIGCVPLILANFPSAIKDSQGCAKQYNEVSQYFNLKLKEALAQLRVDLPLAAITYVDIYSPKCGEIININGTNIVVGSCKKPSTRIIWDGTHYTEAANKIVFDQISTEAFTNPPIPLNRACYKKHMPLVSLIVLILCSTPPIFATKNCDFPAIFSFGASNVDTGGLAAAFQAPPSPYGETYFHRSTGRYSDGRIIIDFIAQSFGLPYLSPYLNSLGSNFTHGANFATGGSTINIPNSIIPNGIFSPFSLQIQYIQFKDFISKTNLIRDKGGVFATLIPKEDYFSNALYTFDIGQNDLIGGYFGNATIKQVNATVPDIVNNFIESIKNIYNLGARSFWIHNTGPSGCTPTILANFPSAIKDSYGCAKQHNEVSQYFNLKLKEALAQLRSDLPLAAIAYLPHVACCGYGGKYNIHVGCGATININGTKIVAGSCKNPSTRIIWDGSHFTETANKIVFDQISTGAFNDPPISLDMACYRK