Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147050 | XP_003589458.2 | 96.937 | 751 | 19 | 1 | 1 | 751 | 1 | 747 | 0.0 | 1501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147050 | sp|Q9M041|BH140_ARATH | 58.165 | 741 | 249 | 10 | 11 | 747 | 225 | 908 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147050 | G7I746 | 96.937 | 751 | 19 | 1 | 1 | 751 | 1 | 747 | 0.0 | 1501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0147050 | 0.847373 | 1.205174e-59 | -8.615850e-47 |
| Msa0011960 | Msa0147050 | 0.801197 | 1.008754e-48 | -8.615850e-47 |
| Msa0014710 | Msa0147050 | 0.828813 | 7.296992e-55 | -8.615850e-47 |
| Msa0020930 | Msa0147050 | 0.829443 | 5.134367e-55 | -8.615850e-47 |
| Msa0031340 | Msa0147050 | 0.814930 | 1.198998e-51 | -8.615850e-47 |
| Msa0032090 | Msa0147050 | 0.809380 | 1.947651e-50 | -8.615850e-47 |
| Msa0032430 | Msa0147050 | 0.800781 | 1.227046e-48 | -8.615850e-47 |
| Msa0033110 | Msa0147050 | 0.803939 | 2.743247e-49 | -8.615850e-47 |
| Msa0033260 | Msa0147050 | 0.801744 | 7.792199e-49 | -8.615850e-47 |
| Msa0036140 | Msa0147050 | 0.805875 | 1.080593e-49 | -8.615850e-47 |
| Msa0068680 | Msa0147050 | 0.851167 | 1.058358e-60 | -8.615850e-47 |
| Msa0079380 | Msa0147050 | 0.822425 | 2.384793e-53 | -8.615850e-47 |
| Msa0083280 | Msa0147050 | 0.813448 | 2.546048e-51 | -8.615850e-47 |
| Msa0084080 | Msa0147050 | 0.805456 | 1.323450e-49 | -8.615850e-47 |
| Msa0084380 | Msa0147050 | 0.813505 | 2.474757e-51 | -8.615850e-47 |
| Msa0089820 | Msa0147050 | 0.804458 | 2.139845e-49 | -8.615850e-47 |
| Msa0090360 | Msa0147050 | 0.818971 | 1.483348e-52 | -8.615850e-47 |
| Msa0095560 | Msa0147050 | 0.802390 | 5.738649e-49 | -8.615850e-47 |
| Msa0102270 | Msa0147050 | 0.804366 | 2.236046e-49 | -8.615850e-47 |
| Msa0114060 | Msa0147050 | 0.838253 | 3.210151e-57 | -8.615850e-47 |
| Msa0116080 | Msa0147050 | 0.802895 | 4.514612e-49 | -8.615850e-47 |
| Msa0131330 | Msa0147050 | 0.800672 | 1.291212e-48 | -8.615850e-47 |
| Msa0137840 | Msa0147050 | 0.804049 | 2.603057e-49 | -8.615850e-47 |
| Msa0147050 | Msa0159930 | 0.835607 | 1.520383e-56 | -8.615850e-47 |
| Msa0147050 | Msa0172070 | 0.800957 | 1.129411e-48 | -8.615850e-47 |
| Msa0147050 | Msa0180500 | 0.813686 | 2.256926e-51 | -8.615850e-47 |
| Msa0147050 | Msa0183050 | 0.816988 | 4.163829e-52 | -8.615850e-47 |
| Msa0147050 | Msa0184040 | 0.815640 | 8.335378e-52 | -8.615850e-47 |
| Msa0147050 | Msa0211150 | 0.801631 | 8.220807e-49 | -8.615850e-47 |
| Msa0147050 | Msa0212990 | 0.814527 | 1.472656e-51 | -8.615850e-47 |
| Msa0147050 | Msa0222620 | 0.801652 | 8.138133e-49 | -8.615850e-47 |
| Msa0147050 | Msa0230680 | 0.805562 | 1.257529e-49 | -8.615850e-47 |
| Msa0147050 | Msa0241140 | 0.808445 | 3.087111e-50 | -8.615850e-47 |
| Msa0147050 | Msa0241470 | 0.806168 | 9.378168e-50 | -8.615850e-47 |
| Msa0147050 | Msa0249200 | 0.801388 | 9.217343e-49 | -8.615850e-47 |
| Msa0147050 | Msa0253290 | 0.800743 | 1.249029e-48 | -8.615850e-47 |
| Msa0147050 | Msa0279220 | 0.818567 | 1.832393e-52 | -8.615850e-47 |
| Msa0147050 | Msa0279240 | 0.806586 | 7.655878e-50 | -8.615850e-47 |
| Msa0147050 | Msa0287650 | 0.808955 | 2.401934e-50 | -8.615850e-47 |
| Msa0147050 | Msa0292120 | 0.818981 | 1.475544e-52 | -8.615850e-47 |
| Msa0147050 | Msa0309770 | 0.828455 | 8.904718e-55 | -8.615850e-47 |
| Msa0147050 | Msa0317730 | 0.813917 | 2.007838e-51 | -8.615850e-47 |
| Msa0147050 | Msa0318980 | 0.811825 | 5.767007e-51 | -8.615850e-47 |
| Msa0147050 | Msa0330340 | 0.816712 | 4.801644e-52 | -8.615850e-47 |
| Msa0147050 | Msa0345970 | 0.829499 | 4.974100e-55 | -8.615850e-47 |
| Msa0147050 | Msa0357020 | 0.803283 | 3.753092e-49 | -8.615850e-47 |
| Msa0147050 | Msa0359030 | 0.804643 | 1.957425e-49 | -8.615850e-47 |
| Msa0147050 | Msa0363680 | 0.827659 | 1.384802e-54 | -8.615850e-47 |
| Msa0147050 | Msa0363790 | 0.803671 | 3.118736e-49 | -8.615850e-47 |
| Msa0147050 | Msa0365100 | 0.804227 | 2.389662e-49 | -8.615850e-47 |
| Msa0147050 | Msa0367870 | 0.807149 | 5.821202e-50 | -8.615850e-47 |
| Msa0147050 | Msa0376350 | 0.834562 | 2.789184e-56 | -8.615850e-47 |
| Msa0147050 | Msa0393080 | 0.825304 | 5.042519e-54 | -8.615850e-47 |
| Msa0147050 | Msa0403970 | 0.807612 | 4.641849e-50 | -8.615850e-47 |
| Msa0147050 | Msa0410650 | 0.804907 | 1.724497e-49 | -8.615850e-47 |
| Msa0147050 | Msa0424790 | 0.824288 | 8.756626e-54 | -8.615850e-47 |
| Msa0147050 | Msa0436760 | 0.804024 | 2.634644e-49 | -8.615850e-47 |
| Msa0147050 | Msa0440750 | 0.830685 | 2.555658e-55 | -8.615850e-47 |
| Msa0147050 | Msa0442610 | 0.801342 | 9.419406e-49 | -8.615850e-47 |
| Msa0147050 | Msa0479170 | 0.822169 | 2.734926e-53 | -8.615850e-47 |
| Msa0147050 | Msa0481530 | 0.849656 | 2.811150e-60 | -8.615850e-47 |
| Msa0147050 | Msa0484780 | 0.810245 | 1.268672e-50 | -8.615850e-47 |
| Msa0147050 | Msa0488560 | 0.837102 | 6.335087e-57 | -8.615850e-47 |
| Msa0147050 | Msa0493250 | 0.800505 | 1.396741e-48 | -8.615850e-47 |
| Msa0147050 | Msa0498650 | 0.801273 | 9.733137e-49 | -8.615850e-47 |
| Msa0147050 | Msa0507680 | 0.812840 | 3.462151e-51 | -8.615850e-47 |
| Msa0147050 | Msa0509610 | 0.804378 | 2.223584e-49 | -8.615850e-47 |
| Msa0147050 | Msa0516170 | 0.818797 | 1.624566e-52 | -8.615850e-47 |
| Msa0147050 | Msa0529890 | 0.833619 | 4.806090e-56 | -8.615850e-47 |
| Msa0147050 | Msa0563840 | 0.826830 | 2.186984e-54 | -8.615850e-47 |
| Msa0147050 | Msa0572840 | 0.840858 | 6.748387e-58 | -8.615850e-47 |
| Msa0147050 | Msa0574390 | 0.853955 | 1.697309e-61 | -8.615850e-47 |
| Msa0147050 | Msa0577500 | 0.836107 | 1.135988e-56 | -8.615850e-47 |
| Msa0147050 | Msa0585560 | 0.839484 | 1.541146e-57 | -8.615850e-47 |
| Msa0147050 | Msa0607050 | 0.813275 | 2.779751e-51 | -8.615850e-47 |
| Msa0147050 | Msa0617640 | 0.815970 | 7.036941e-52 | -8.615850e-47 |
| Msa0147050 | Msa0625720 | 0.838016 | 3.693846e-57 | -8.615850e-47 |
| Msa0147050 | Msa0627450 | 0.823912 | 1.072835e-53 | -8.615850e-47 |
| Msa0147050 | Msa0648880 | 0.806642 | 7.448771e-50 | -8.615850e-47 |
| Msa0147050 | Msa0663390 | 0.845238 | 4.600985e-59 | -8.615850e-47 |
| Msa0147050 | Msa0667050 | 0.824319 | 8.608654e-54 | -8.615850e-47 |
| Msa0147050 | Msa0683510 | 0.816990 | 4.159360e-52 | -8.615850e-47 |
| Msa0147050 | Msa0688480 | 0.816404 | 5.626394e-52 | -8.615850e-47 |
| Msa0147050 | Msa0690150 | 0.800169 | 1.634883e-48 | -8.615850e-47 |
| Msa0147050 | Msa0691380 | 0.808945 | 2.413833e-50 | -8.615850e-47 |
| Msa0147050 | Msa0707250 | 0.810055 | 1.394062e-50 | -8.615850e-47 |
| Msa0147050 | Msa0711780 | 0.803486 | 3.407053e-49 | -8.615850e-47 |
| Msa0147050 | Msa0731940 | 0.806852 | 6.726878e-50 | -8.615850e-47 |
| Msa0147050 | Msa0740510 | 0.822675 | 2.086715e-53 | -8.615850e-47 |
| Msa0147050 | Msa0744040 | 0.816692 | 4.850732e-52 | -8.615850e-47 |
| Msa0147050 | Msa0762970 | 0.808316 | 3.287893e-50 | -8.615850e-47 |
| Msa0147050 | Msa0796700 | 0.804731 | 1.876782e-49 | -8.615850e-47 |
| Msa0147050 | Msa0820770 | 0.820239 | 7.618825e-53 | -8.615850e-47 |
| Msa0147050 | Msa0824660 | 0.822716 | 2.041393e-53 | -8.615850e-47 |
| Msa0147050 | Msa0832150 | 0.800568 | 1.356060e-48 | -8.615850e-47 |
| Msa0147050 | Msa0832340 | 0.800687 | 1.282116e-48 | -8.615850e-47 |
| Msa0147050 | Msa0842790 | 0.802745 | 4.848855e-49 | -8.615850e-47 |
| Msa0147050 | Msa0861090 | 0.819039 | 1.431880e-52 | -8.615850e-47 |
| Msa0147050 | Msa0863930 | 0.810693 | 1.015179e-50 | -8.615850e-47 |
| Msa0147050 | Msa0871270 | 0.808707 | 2.714006e-50 | -8.615850e-47 |
| Msa0147050 | Msa0897330 | 0.802609 | 5.172084e-49 | -8.615850e-47 |
| Msa0147050 | Msa0898750 | 0.809844 | 1.547519e-50 | -8.615850e-47 |
| Msa0147050 | Msa0899980 | 0.801624 | 8.247542e-49 | -8.615850e-47 |
| Msa0147050 | Msa0906690 | 0.805560 | 1.258295e-49 | -8.615850e-47 |
| Msa0147050 | Msa0928130 | 0.811072 | 8.406361e-51 | -8.615850e-47 |
| Msa0147050 | Msa0933230 | 0.801161 | 1.025986e-48 | -8.615850e-47 |
| Msa0147050 | Msa0935670 | 0.803149 | 4.000533e-49 | -8.615850e-47 |
| Msa0147050 | Msa0938220 | 0.803327 | 3.675270e-49 | -8.615850e-47 |
| Msa0147050 | Msa0939000 | 0.802538 | 5.351080e-49 | -8.615850e-47 |
| Msa0147050 | Msa0964310 | 0.801244 | 9.864831e-49 | -8.615850e-47 |
| Msa0147050 | Msa1003620 | 0.820833 | 5.564657e-53 | -8.615850e-47 |
| Msa0147050 | Msa1014540 | 0.801966 | 7.016582e-49 | -8.615850e-47 |
| Msa0147050 | Msa1036610 | 0.804487 | 2.110258e-49 | -8.615850e-47 |
| Msa0147050 | Msa1041210 | 0.804447 | 2.150883e-49 | -8.615850e-47 |
| Msa0147050 | Msa1045200 | 0.800582 | 1.347272e-48 | -8.615850e-47 |
| Msa0147050 | Msa1046460 | 0.805983 | 1.025626e-49 | -8.615850e-47 |
| Msa0147050 | Msa1075540 | 0.804731 | 1.876922e-49 | -8.615850e-47 |
| Msa0147050 | Msa1075650 | 0.813122 | 3.002640e-51 | -8.615850e-47 |
| Msa0147050 | Msa1082500 | 0.819960 | 8.825602e-53 | -8.615850e-47 |
| Msa0147050 | Msa1085200 | 0.806887 | 6.613955e-50 | -8.615850e-47 |
| Msa0147050 | Msa1113170 | 0.802082 | 6.642358e-49 | -8.615850e-47 |
| Msa0147050 | Msa1121440 | 0.818424 | 1.974522e-52 | -8.615850e-47 |
| Msa0147050 | Msa1123380 | 0.814226 | 1.716496e-51 | -8.615850e-47 |
| Msa0147050 | Msa1124960 | 0.802983 | 4.329141e-49 | -8.615850e-47 |
| Msa0147050 | Msa1126450 | 0.807633 | 4.594130e-50 | -8.615850e-47 |
| Msa0147050 | Msa1131220 | 0.801577 | 8.430897e-49 | -8.615850e-47 |
| Msa0147050 | Msa1137570 | 0.813348 | 2.678469e-51 | -8.615850e-47 |
| Msa0147050 | Msa1142020 | 0.811911 | 5.525496e-51 | -8.615850e-47 |
| Msa0147050 | Msa1154280 | 0.801826 | 7.495494e-49 | -8.615850e-47 |
| Msa0147050 | Msa1160590 | 0.802688 | 4.981031e-49 | -8.615850e-47 |
| Msa0147050 | Msa1167340 | 0.813544 | 2.425599e-51 | -8.615850e-47 |
| Msa0147050 | Msa1181250 | 0.802900 | 4.504181e-49 | -8.615850e-47 |
| Msa0147050 | Msa1181330 | 0.800409 | 1.460712e-48 | -8.615850e-47 |
| Msa0147050 | Msa1189070 | 0.816333 | 5.836304e-52 | -8.615850e-47 |
| Msa0147050 | Msa1204530 | 0.836700 | 8.026145e-57 | -8.615850e-47 |
| Msa0147050 | Msa1204630 | 0.811122 | 8.197412e-51 | -8.615850e-47 |
| Msa0147050 | Msa1208880 | 0.829841 | 4.106677e-55 | -8.615850e-47 |
| Msa0147050 | Msa1245930 | 0.826168 | 3.145632e-54 | -8.615850e-47 |
| Msa0147050 | Msa1259060 | 0.817081 | 3.967841e-52 | -8.615850e-47 |
| Msa0147050 | Msa1284550 | 0.820239 | 7.619768e-53 | -8.615850e-47 |
| Msa0147050 | Msa1286610 | 0.812228 | 4.712431e-51 | -8.615850e-47 |
| Msa0147050 | Msa1287460 | 0.813055 | 3.106183e-51 | -8.615850e-47 |
| Msa0147050 | Msa1296760 | 0.818161 | 2.264142e-52 | -8.615850e-47 |
| Msa0147050 | Msa1303250 | 0.802442 | 5.600664e-49 | -8.615850e-47 |
| Msa0147050 | Msa1305340 | 0.804462 | 2.135691e-49 | -8.615850e-47 |
| Msa0147050 | Msa1306840 | 0.837924 | 3.901143e-57 | -8.615850e-47 |
| Msa0147050 | Msa1331000 | 0.830443 | 2.929089e-55 | -8.615850e-47 |
| Msa0147050 | Msa1346840 | 0.805773 | 1.135268e-49 | -8.615850e-47 |
| Msa0147050 | Msa1353980 | 0.817247 | 3.640614e-52 | -8.615850e-47 |
| Msa0147050 | Msa1366600 | 0.809420 | 1.908810e-50 | -8.615850e-47 |
| Msa0147050 | Msa1370070 | -0.809700 | 1.661992e-50 | -8.615850e-47 |
| Msa0147050 | Msa1374470 | 0.806205 | 9.209538e-50 | -8.615850e-47 |
| Msa0147050 | Msa1377570 | 0.803472 | 3.429657e-49 | -8.615850e-47 |
| Msa0147050 | Msa1400580 | 0.805980 | 1.026944e-49 | -8.615850e-47 |
| Msa0147050 | Msa1400870 | -0.800734 | 1.254214e-48 | -8.615850e-47 |
| Msa0147050 | Msa1403890 | 0.800187 | 1.621192e-48 | -8.615850e-47 |
| Msa0147050 | Msa1404300 | 0.804007 | 2.655379e-49 | -8.615850e-47 |
| Msa0147050 | Msa1411020 | 0.806766 | 7.014812e-50 | -8.615850e-47 |
| Msa0147050 | Msa1424450 | 0.815129 | 1.083037e-51 | -8.615850e-47 |
| Msa0147050 | Msa1425880 | 0.801247 | 9.854130e-49 | -8.615850e-47 |
| Msa0147050 | Msa1432420 | 0.801043 | 1.084673e-48 | -8.615850e-47 |
| Msa0147050 | Msa1433390 | 0.815872 | 7.400591e-52 | -8.615850e-47 |
| Msa0147050 | Msa1439320 | 0.805074 | 1.590871e-49 | -8.615850e-47 |
| Msa0147050 | Msa1443850 | 0.804380 | 2.220898e-49 | -8.615850e-47 |
| Msa0147050 | Msa1451160 | 0.804210 | 2.409521e-49 | -8.615850e-47 |
| Msa0147050 | Msa1460020 | 0.803783 | 2.956036e-49 | -8.615850e-47 |
| Msa0147050 | Msa1460050 | 0.806332 | 8.658434e-50 | -8.615850e-47 |
| Msa0147050 | Msa1466540 | 0.809329 | 1.997229e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147050 | MtrunA17_Chr1g0156471 | 96.937 | 751 | 19 | 1 | 1 | 751 | 1 | 747 | 0.0 | 1501 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0147050 | AT5G01310.1 | 58.165 | 741 | 249 | 10 | 11 | 747 | 23 | 706 | 0.0 | 858 |
Find 202 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAAGCCTTCACTTAATT+TGG | 0.070308 | 1_4:+6916755 | None:intergenic |
| CAACTGCATGGATATCTATT+TGG | 0.167991 | 1_4:+6916901 | None:intergenic |
| CGCAGATGCAAAACCCATTT+TGG | 0.177970 | 1_4:-6918255 | Msa0147050:intron |
| CATTATACTAGATTGGATTT+TGG | 0.192997 | 1_4:+6916617 | None:intergenic |
| ATACCGAAAGGTGCTCATTT+TGG | 0.219069 | 1_4:+6914476 | None:intergenic |
| CAATCTCCCAACTTCGCTTT+GGG | 0.219227 | 1_4:-6913155 | Msa0147050:three_prime_UTR |
| CAACATGGGTAAAGAACTTC+TGG | 0.235682 | 1_4:+6916175 | None:intergenic |
| TGCACACAGTGGGTTTAAAA+TGG | 0.240693 | 1_4:-6914444 | Msa0147050:CDS |
| AGTATTTGTAGAATGATTTC+TGG | 0.242332 | 1_4:+6914909 | None:intergenic |
| ACCAACTAAGATTACCAAAA+TGG | 0.255360 | 1_4:+6918241 | None:intergenic |
| GACAACATGGCACACCAAAA+TGG | 0.255852 | 1_4:+6918492 | None:intergenic |
| TAATCATTGTTCAGACAATT+TGG | 0.269486 | 1_4:+6915072 | None:intergenic |
| CGAGATTCTTGTTCTTGTTC+AGG | 0.281395 | 1_4:+6918424 | None:intergenic |
| GGTCTTTGTGGATTCATATT+AGG | 0.285029 | 1_4:+6915093 | None:intergenic |
| GAGTTGTGATGTGTCACTTT+TGG | 0.286916 | 1_4:+6918462 | None:intergenic |
| GTCCAAGGACATGTATGATA+TGG | 0.289881 | 1_4:+6915115 | None:intergenic |
| TATAATGAAATTCCTGAAAA+AGG | 0.291515 | 1_4:-6916601 | Msa0147050:CDS |
| TGCGTTCCTCTTCTCGCACC+TGG | 0.293905 | 1_4:-6918178 | Msa0147050:CDS |
| TTTCAGGATGCATAGCTATT+AGG | 0.300282 | 1_4:+6914707 | None:intergenic |
| AGTAAGTGCTAATCTATAAA+AGG | 0.309609 | 1_4:-6913267 | Msa0147050:exon |
| GCGCATGCTAATTCCAAGTT+AGG | 0.313836 | 1_4:-6916468 | Msa0147050:CDS |
| CACCCTGACAAAATGTTATT+CGG | 0.326546 | 1_4:+6916733 | None:intergenic |
| TCTCGATCTGTTAAACGATC+TGG | 0.327806 | 1_4:-6916849 | Msa0147050:CDS |
| TTCAGACAATTTGGTCTTTG+TGG | 0.329030 | 1_4:+6915081 | None:intergenic |
| GACTCTACTTCCCAGACTTC+TGG | 0.329410 | 1_4:-6916534 | Msa0147050:CDS |
| CTGCCTTGTCATGGTTGAAT+TGG | 0.331343 | 1_4:+6916334 | None:intergenic |
| TTGGTTGCAGACTCCAGTTC+AGG | 0.336397 | 1_4:+6915225 | None:intergenic |
| GGAATTTCATTATACTAGAT+TGG | 0.340534 | 1_4:+6916610 | None:intergenic |
| TTAAAGCCTTCACTTAATTT+GGG | 0.349736 | 1_4:+6916756 | None:intergenic |
| GACTTTAAGCGGGGTATGTT+TGG | 0.350434 | 1_4:+6913364 | None:intergenic |
| AAGGTGGATTTCCCGCTTCC+AGG | 0.350962 | 1_4:+6918215 | None:intergenic |
| CCTACTCGAAAACGGGCGTT+TGG | 0.353806 | 1_4:-6913305 | Msa0147050:CDS |
| TCAATCTCCCAACTTCGCTT+TGG | 0.354010 | 1_4:-6913156 | Msa0147050:three_prime_UTR |
| AAATACAAGGGAACCCTTGA+TGG | 0.361121 | 1_4:-6914838 | Msa0147050:CDS |
| AACCTTTCACATGGCTGCTT+CGG | 0.364818 | 1_4:-6916657 | Msa0147050:CDS |
| CTATTGCTTTAGGACACTAT+TGG | 0.364954 | 1_4:-6917062 | Msa0147050:intron |
| ATCACTCGCCTTTATTCAAC+TGG | 0.366524 | 1_4:-6916147 | Msa0147050:CDS |
| AACTGCATGGATATCTATTT+GGG | 0.366972 | 1_4:+6916902 | None:intergenic |
| TGACGACAAGCTACTGTCTA+TGG | 0.369859 | 1_4:-6913419 | Msa0147050:CDS |
| CAAAGAAGGCATGGGGATCA+TGG | 0.381280 | 1_4:-6914744 | Msa0147050:CDS |
| CACCTGGGTTCGCGTTTGTC+AGG | 0.384918 | 1_4:-6918162 | Msa0147050:intron |
| TGGAATTAGCATGCGCTGTT+GGG | 0.385424 | 1_4:+6916475 | None:intergenic |
| AAATCTGCTGTTGAAATAGA+TGG | 0.385657 | 1_4:+6916357 | None:intergenic |
| GCAAACCTCCAGTTGAATAA+AGG | 0.388247 | 1_4:+6916139 | None:intergenic |
| TGATTCCCTCTGCAAAGATA+TGG | 0.394356 | 1_4:-6916505 | Msa0147050:CDS |
| TTGTAAATCTGTAGTTCAGC+TGG | 0.394507 | 1_4:-6912991 | Msa0147050:three_prime_UTR |
| GATATGGGTCACACCTTCTC+TGG | 0.408701 | 1_4:+6915131 | None:intergenic |
| CCTGCTTACCTACTCGAAAA+CGG | 0.410998 | 1_4:-6913313 | Msa0147050:CDS |
| TATCAATTCTTAAATTCTCA+TGG | 0.413080 | 1_4:-6913024 | Msa0147050:three_prime_UTR |
| ATTGATGAGGTATCTATTCA+TGG | 0.413174 | 1_4:-6913460 | Msa0147050:CDS |
| CATCGACTCGGCATATGTAC+TGG | 0.415848 | 1_4:-6912909 | Msa0147050:three_prime_UTR |
| CTGCTTACCTACTCGAAAAC+GGG | 0.421330 | 1_4:-6913312 | Msa0147050:CDS |
| CCAACTAAGATTACCAAAAT+GGG | 0.422030 | 1_4:+6918242 | None:intergenic |
| TGATGCCGCAGGTCCTGAAC+TGG | 0.422054 | 1_4:-6915238 | Msa0147050:CDS |
| TGCCGCTTTGGATTTAACTA+AGG | 0.423436 | 1_4:+6916215 | None:intergenic |
| TAGTGCTGCTAGAGCATTGA+AGG | 0.424756 | 1_4:-6917003 | Msa0147050:CDS |
| TCTTTAGATGCAGTATCAAC+TGG | 0.427580 | 1_4:+6916570 | None:intergenic |
| CGAGAAATACACAGCTTAGC+AGG | 0.436953 | 1_4:+6916867 | None:intergenic |
| CGGCATATGTACTGGGTCAC+TGG | 0.441628 | 1_4:-6912901 | Msa0147050:three_prime_UTR |
| ACTAATATGCGACTTTAAGC+GGG | 0.448216 | 1_4:+6913354 | None:intergenic |
| CAGAAGTTCTTTACCCATGT+TGG | 0.449612 | 1_4:-6916174 | Msa0147050:CDS |
| AAATGTAGTTGTCGCATTGA+AGG | 0.453847 | 1_4:+6913580 | None:intergenic |
| GCTTATGCATCACTATTTGA+AGG | 0.454340 | 1_4:-6915021 | Msa0147050:CDS |
| TTTATAGATTAGCACTTACT+TGG | 0.457038 | 1_4:+6913270 | None:intergenic |
| TTGGAATTAGCATGCGCTGT+TGG | 0.457695 | 1_4:+6916474 | None:intergenic |
| AGCACCTTTCGGTATTGAAA+AGG | 0.458468 | 1_4:-6914468 | Msa0147050:CDS |
| TGCCTTCTTTGTGCTCCCAT+CGG | 0.460312 | 1_4:+6914756 | None:intergenic |
| CTTGTTCAGGATTCTATGAT+CGG | 0.464970 | 1_4:+6918437 | None:intergenic |
| TACGGGTTCTAGAGATGAAA+AGG | 0.465029 | 1_4:-6914800 | Msa0147050:CDS |
| CTCGATCTGTTAAACGATCT+GGG | 0.465731 | 1_4:-6916848 | Msa0147050:CDS |
| TCTTGATGATATTCCGACTC+TGG | 0.466974 | 1_4:-6916385 | Msa0147050:CDS |
| TGTCCAAAATGAGCACCTTT+CGG | 0.469516 | 1_4:-6914479 | Msa0147050:CDS |
| TGCAGAGTACTCAAATAAGA+TGG | 0.475710 | 1_4:-6916289 | Msa0147050:CDS |
| AGCAGATATTATTGTTGAGA+AGG | 0.477645 | 1_4:-6916313 | Msa0147050:CDS |
| GTTGAACCGCATGACTGAAT+CGG | 0.478056 | 1_4:-6912851 | Msa0147050:three_prime_UTR |
| CTTGAGTGAGAATTCTTCAC+TGG | 0.479309 | 1_4:-6914410 | Msa0147050:CDS |
| GACAGATATAATCTTAAGGC+CGG | 0.479472 | 1_4:+6912800 | None:intergenic |
| CAAGTCAACTAGAACAAGTC+TGG | 0.479496 | 1_4:+6916260 | None:intergenic |
| ACAACATGGCACACCAAAAT+GGG | 0.483546 | 1_4:+6918493 | None:intergenic |
| ATATATACGTAGACTCATCT+TGG | 0.484785 | 1_4:-6913231 | Msa0147050:three_prime_UTR |
| ATGCTCTAGCAGCACTACTT+AGG | 0.487592 | 1_4:+6917009 | None:intergenic |
| CGACTGAAACCTGGCGGTGG+AGG | 0.488427 | 1_4:-6915279 | Msa0147050:CDS |
| TCTTCACTGGTATTTCGCCT+TGG | 0.488540 | 1_4:-6914397 | Msa0147050:CDS |
| CTTTAGGACACTATTGGAAA+CGG | 0.488697 | 1_4:-6917056 | Msa0147050:intron |
| CATAGACAGATATAATCTTA+AGG | 0.489254 | 1_4:+6912796 | None:intergenic |
| CTCGAAAACGGGCGTTTGGT+TGG | 0.491923 | 1_4:-6913301 | Msa0147050:CDS |
| TTCGAGTAGGTAAGCAGGAA+AGG | 0.492668 | 1_4:+6913318 | None:intergenic |
| TCCAAGGACATGTATGATAT+GGG | 0.494197 | 1_4:+6915116 | None:intergenic |
| GGGGTCATACCACAGTCCTT+AGG | 0.494737 | 1_4:-6913135 | Msa0147050:three_prime_UTR |
| GTAATCTTAGTTGGTGCACC+TGG | 0.497340 | 1_4:-6918233 | Msa0147050:CDS |
| TCTCCTTTGTTCACCAGAGA+AGG | 0.497892 | 1_4:-6915144 | Msa0147050:CDS |
| ACCCATATCATACATGTCCT+TGG | 0.498028 | 1_4:-6915117 | Msa0147050:CDS |
| TTAGTTGGTGCACCTGGAAG+CGG | 0.499378 | 1_4:-6918227 | Msa0147050:CDS |
| AAGAGGCTGCAAGGTTCTCC+AGG | 0.499868 | 1_4:-6915046 | Msa0147050:CDS |
| ACATTTACATGTTATTAGCC+AGG | 0.504468 | 1_4:-6913563 | Msa0147050:CDS |
| TATGCATCCTGAAAAGCATA+AGG | 0.504572 | 1_4:-6914698 | Msa0147050:CDS |
| AGTAAGAGAGATGCTGATCA+TGG | 0.505253 | 1_4:-6914877 | Msa0147050:CDS |
| GTATGACCCCAAAGCGAAGT+TGG | 0.507159 | 1_4:+6913148 | None:intergenic |
| TAGTCGAACCACTGAGTCAC+TGG | 0.508175 | 1_4:-6912873 | Msa0147050:three_prime_UTR |
| GCGAGTGATGTCTCCAACAT+GGG | 0.513703 | 1_4:+6916161 | None:intergenic |
| TTAGGGTCAAAAGATATAGA+AGG | 0.514351 | 1_4:-6916450 | Msa0147050:CDS |
| ATGACTGAATCGGATTAAAC+CGG | 0.515030 | 1_4:-6912841 | Msa0147050:three_prime_UTR |
| TATGACCCCAAAGCGAAGTT+GGG | 0.517642 | 1_4:+6913149 | None:intergenic |
| GTGGATTCATATTAGGTCCA+AGG | 0.518443 | 1_4:+6915100 | None:intergenic |
| AAGAGAAACTTGATTGTGAC+AGG | 0.518643 | 1_4:+6916404 | None:intergenic |
| TACTAATATGCGACTTTAAG+CGG | 0.518681 | 1_4:+6913353 | None:intergenic |
| CTGAACAATGATTATGAAAG+AGG | 0.518865 | 1_4:-6915063 | Msa0147050:CDS |
| TAGTTGGTGCACCTGGAAGC+GGG | 0.522269 | 1_4:-6918226 | Msa0147050:CDS |
| CTGCTAGAGCATTGAAGGAT+GGG | 0.522735 | 1_4:-6916998 | Msa0147050:CDS |
| GGAAGAGTGTATTCATTGAC+AGG | 0.523105 | 1_4:-6916977 | Msa0147050:CDS |
| AAAGAAGGCATGGGGATCAT+GGG | 0.523356 | 1_4:-6914743 | Msa0147050:CDS |
| GCACACAGTGGGTTTAAAAT+GGG | 0.524257 | 1_4:-6914443 | Msa0147050:CDS |
| ATTTGCAGGCGACTGAAACC+TGG | 0.527138 | 1_4:-6915288 | Msa0147050:intron |
| GCAGAGTACTCAAATAAGAT+GGG | 0.527394 | 1_4:-6916288 | Msa0147050:CDS |
| CGCATGCTAATTCCAAGTTA+GGG | 0.528744 | 1_4:-6916467 | Msa0147050:CDS |
| GAGAGATGCTGATCATGGAT+TGG | 0.529303 | 1_4:-6914872 | Msa0147050:CDS |
| GCGTTCCTCTTCTCGCACCT+GGG | 0.532165 | 1_4:-6918177 | Msa0147050:CDS |
| TGTAAATCTGTAGTTCAGCT+GGG | 0.536640 | 1_4:-6912990 | Msa0147050:three_prime_UTR |
| ATTTGAAGAATAAGAAGCAC+TGG | 0.536704 | 1_4:-6913525 | Msa0147050:CDS |
| AAAGGAGAAGATGAAGGTAG+AGG | 0.537684 | 1_4:+6915159 | None:intergenic |
| AACCGATGGGAGCACAAAGA+AGG | 0.540085 | 1_4:-6914758 | Msa0147050:CDS |
| GGTCAGACTGATAAATCTGC+TGG | 0.543721 | 1_4:-6916429 | Msa0147050:CDS |
| ATGGGAGCACAAAGAAGGCA+TGG | 0.547623 | 1_4:-6914753 | Msa0147050:CDS |
| GCATCTAAAGAAAATACCAT+TGG | 0.549466 | 1_4:-6916558 | Msa0147050:CDS |
| TCGGATTAAACCGGACAACT+CGG | 0.549694 | 1_4:-6912832 | Msa0147050:three_prime_UTR |
| TCGAGTAGGTAAGCAGGAAA+GGG | 0.550559 | 1_4:+6913319 | None:intergenic |
| ACTATTGGAAACGGTAAAGC+AGG | 0.551394 | 1_4:-6917047 | Msa0147050:CDS |
| GTACATCAAAATGAAAACCT+TGG | 0.551599 | 1_4:-6914973 | Msa0147050:CDS |
| TTACCACGAATATGTGCCTA+AGG | 0.553146 | 1_4:+6913119 | None:intergenic |
| GTTAAACGATCTGGGCATGA+AGG | 0.553439 | 1_4:-6916840 | Msa0147050:CDS |
| TTCATCTCTAGAACCCGTAA+AGG | 0.555487 | 1_4:+6914804 | None:intergenic |
| TGGGAGCACAAAGAAGGCAT+GGG | 0.556101 | 1_4:-6914752 | Msa0147050:CDS |
| GCATTGACACCTCCACCGCC+AGG | 0.557019 | 1_4:+6915270 | None:intergenic |
| AGGTCGTGTCAAAACCATCA+AGG | 0.558441 | 1_4:+6914824 | None:intergenic |
| TCATTGCAAATGCTGCGAAC+TGG | 0.559496 | 1_4:-6916107 | Msa0147050:intron |
| GGAAACCTTTGTTGTTGTCG+AGG | 0.561531 | 1_4:+6918381 | None:intergenic |
| ATAGTGATGCATAAGCATCC+TGG | 0.561975 | 1_4:+6915028 | None:intergenic |
| TCAGAGCATAAAAGAACCGA+TGG | 0.563322 | 1_4:-6914772 | Msa0147050:CDS |
| CATAACCTCTTCACAGAAGG+TGG | 0.564702 | 1_4:+6918199 | None:intergenic |
| AGTCCTTAGGCACATATTCG+TGG | 0.565139 | 1_4:-6913122 | Msa0147050:three_prime_UTR |
| GCGAACCCAGGTGCGAGAAG+AGG | 0.566181 | 1_4:+6918172 | None:intergenic |
| CTCGTATTCGAACATGGACA+TGG | 0.566252 | 1_4:-6918405 | Msa0147050:exon |
| AGCTACTGTCTATGGAGTTG+AGG | 0.566802 | 1_4:-6913411 | Msa0147050:CDS |
| TTTGTCCATATCTTTGCAGA+GGG | 0.569456 | 1_4:+6916500 | None:intergenic |
| TATTCGTGGTAAAATTTGCA+AGG | 0.569640 | 1_4:-6913108 | Msa0147050:three_prime_UTR |
| AATCTCCCAACTTCGCTTTG+GGG | 0.570419 | 1_4:-6913154 | Msa0147050:three_prime_UTR |
| GCTGCTAGAGCATTGAAGGA+TGG | 0.570427 | 1_4:-6916999 | Msa0147050:CDS |
| AAAGCAAAGACTCTTTCACC+TGG | 0.571665 | 1_4:-6915198 | Msa0147050:CDS |
| ATCGACTCGGCATATGTACT+GGG | 0.572898 | 1_4:-6912908 | Msa0147050:three_prime_UTR |
| GGCGAGTGATGTCTCCAACA+TGG | 0.576042 | 1_4:+6916160 | None:intergenic |
| AAGGAGAAGATGAAGGTAGA+GGG | 0.576283 | 1_4:+6915160 | None:intergenic |
| AACATGGGTAAAGAACTTCT+GGG | 0.584861 | 1_4:+6916176 | None:intergenic |
| TAATATCTGCTGCCTTGTCA+TGG | 0.588066 | 1_4:+6916325 | None:intergenic |
| GGGACAACAACAGCATTCCC+AGG | 0.588798 | 1_4:+6915180 | None:intergenic |
| ACAGATATAATCTTAAGGCC+GGG | 0.591980 | 1_4:+6912801 | None:intergenic |
| AACCTGACAAACGCGAACCC+AGG | 0.598184 | 1_4:+6918160 | None:intergenic |
| GACCGAAGCAGCCATGTGAA+AGG | 0.599956 | 1_4:+6916655 | None:intergenic |
| TGACTTGCTTGAAATTTCAG+AGG | 0.600463 | 1_4:-6914674 | Msa0147050:CDS |
| AAGAATCTCGTATTCGAACA+TGG | 0.601349 | 1_4:-6918411 | Msa0147050:exon |
| GTGAACAAAGGAGAAGATGA+AGG | 0.601999 | 1_4:+6915153 | None:intergenic |
| TGCATCAATTGTTAGGAACA+CGG | 0.604743 | 1_4:-6914995 | Msa0147050:CDS |
| TGATTATGAAAGAGGCTGCA+AGG | 0.604953 | 1_4:-6915055 | Msa0147050:CDS |
| ACTCGCCTTTATTCAACTGG+AGG | 0.605047 | 1_4:-6916144 | Msa0147050:CDS |
| CTCAGTAGATATAATTGATG+AGG | 0.605508 | 1_4:-6913473 | Msa0147050:CDS |
| AGGCGACTGAAACCTGGCGG+TGG | 0.612279 | 1_4:-6915282 | Msa0147050:CDS |
| GGTCGTGTCAAAACCATCAA+GGG | 0.613737 | 1_4:+6914825 | None:intergenic |
| ATTTCGCCTTGGATATCACT+CGG | 0.615306 | 1_4:-6914386 | Msa0147050:intron |
| GAGTTGCCCAAATTAAGTGA+AGG | 0.616122 | 1_4:-6916762 | Msa0147050:CDS |
| ATAGATGGAAATGCCAGAGT+CGG | 0.616187 | 1_4:+6916372 | None:intergenic |
| TTGGTGTTGGCACGGAGTGG+AGG | 0.616958 | 1_4:-6914520 | Msa0147050:CDS |
| ACGCATAACCTCTTCACAGA+AGG | 0.623531 | 1_4:+6918196 | None:intergenic |
| ATTGTATTGAACTGATGACT+CGG | 0.624834 | 1_4:-6912757 | Msa0147050:three_prime_UTR |
| GAAGGTCAAGTACAACTGCA+TGG | 0.626377 | 1_4:+6916889 | None:intergenic |
| GACAACTCGGTTAAAACACC+CGG | 0.627424 | 1_4:-6912819 | Msa0147050:three_prime_UTR |
| AAATACACAGCTTAGCAGGA+AGG | 0.627877 | 1_4:+6916871 | None:intergenic |
| CCACTGGAGAACCTTTCACA+TGG | 0.631497 | 1_4:-6916666 | Msa0147050:CDS |
| GTTCAGGATTCTATGATCGG+AGG | 0.631846 | 1_4:+6918440 | None:intergenic |
| TTGAAAAGGATGCACACAGT+GGG | 0.633054 | 1_4:-6914454 | Msa0147050:CDS |
| ACACCTTCTCTGGTGAACAA+AGG | 0.638418 | 1_4:+6915141 | None:intergenic |
| GGGCATGAAGGAAATTTGCA+AGG | 0.641797 | 1_4:-6916828 | Msa0147050:CDS |
| CTGGGAAGTAGAGTCTCCAA+TGG | 0.644193 | 1_4:+6916542 | None:intergenic |
| CGGTTCAACCAGTGACTCAG+TGG | 0.645525 | 1_4:+6912865 | None:intergenic |
| GTCCTTAGTTAAATCCAAAG+CGG | 0.648704 | 1_4:-6916217 | Msa0147050:CDS |
| GAAATCCACCTTCTGTGAAG+AGG | 0.649778 | 1_4:-6918204 | Msa0147050:CDS |
| CAGAGTACTCAAATAAGATG+GGG | 0.650521 | 1_4:-6916287 | Msa0147050:CDS |
| AAGCAAAGACTCTTTCACCT+GGG | 0.653354 | 1_4:-6915197 | Msa0147050:CDS |
| TTTAATCCGATTCAGTCATG+CGG | 0.653376 | 1_4:+6912845 | None:intergenic |
| ATTGAATGATATGTATCCTA+AGG | 0.657093 | 1_4:-6914641 | Msa0147050:intron |
| ACTCGGCTCGGACATCGACT+CGG | 0.659543 | 1_4:-6912921 | Msa0147050:three_prime_UTR |
| AGACTCCAGTTCAGGACCTG+CGG | 0.667051 | 1_4:+6915233 | None:intergenic |
| TTTCCAATTCAACCATGACA+AGG | 0.670098 | 1_4:-6916337 | Msa0147050:CDS |
| ATGGACCTCGACAACAACAA+AGG | 0.670502 | 1_4:-6918386 | Msa0147050:intron |
| GGGAGCACAAAGAAGGCATG+GGG | 0.672205 | 1_4:-6914751 | Msa0147050:CDS |
| CAGAGCATAAAAGAACCGAT+GGG | 0.673943 | 1_4:-6914771 | Msa0147050:CDS |
| CCATGTGAAAGGTTCTCCAG+TGG | 0.675910 | 1_4:+6916666 | None:intergenic |
| GAATATGTGCCTAAGGACTG+TGG | 0.685856 | 1_4:+6913126 | None:intergenic |
| CTAATATGCGACTTTAAGCG+GGG | 0.687766 | 1_4:+6913355 | None:intergenic |
| TGCATACCGAGTGATATCCA+AGG | 0.698263 | 1_4:+6914380 | None:intergenic |
| TGCAGGCGACTGAAACCTGG+CGG | 0.712644 | 1_4:-6915285 | Msa0147050:intron |
| CATGAAGGAAATTTGCAAGG+TGG | 0.718134 | 1_4:-6916825 | Msa0147050:CDS |
| ATTGAAAAGGATGCACACAG+TGG | 0.722541 | 1_4:-6914455 | Msa0147050:CDS |
| GCAATCTTAATAGAGAACAG+CGG | 0.774151 | 1_4:-6916953 | Msa0147050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGTTTTCAACTTAATTAA+TGG | + | chr1_4:6913200-6913219 | None:intergenic | 15.0% |
| !! | ATTACAAAAACATAATAGAA+TGG | + | chr1_4:6913378-6913397 | None:intergenic | 15.0% |
| !!! | AAGAAATAAGCTATTTTAAA+AGG | - | chr1_4:6917115-6917134 | Msa0147050:intron | 15.0% |
| !!! | TTTTTGCCTTTTCTTTTTAA+TGG | - | chr1_4:6913164-6913183 | Msa0147050:three_prime_UTR | 20.0% |
| !! | TTCTGAATCTTTACTAATAT+TGG | - | chr1_4:6914147-6914166 | Msa0147050:intron | 20.0% |
| !! | ATTGATACATATCAAAAACT+TGG | - | chr1_4:6914555-6914574 | Msa0147050:intron | 20.0% |
| !! | TTGATACATATCAAAAACTT+GGG | - | chr1_4:6914556-6914575 | Msa0147050:intron | 20.0% |
| !! | TATAATGAAATTCCTGAAAA+AGG | - | chr1_4:6914644-6914663 | Msa0147050:CDS | 20.0% |
| !!! | GCTAACTTAAATTTGTTTTA+CGG | + | chr1_4:6916960-6916979 | None:intergenic | 20.0% |
| !!! | GGATATATATTTGAAATTTG+TGG | - | chr1_4:6917092-6917111 | Msa0147050:intron | 20.0% |
| !!! | ATTATTTGCTCACTTTTTTT+CGG | - | chr1_4:6917181-6917200 | Msa0147050:intron | 20.0% |
| !!! | TCTGTAAACTAAAATTTTCA+TGG | - | chr1_4:6917406-6917425 | Msa0147050:intron | 20.0% |
| !! | TATAATGTACACAAAAAAGA+GGG | + | chr1_4:6917450-6917469 | None:intergenic | 20.0% |
| !! | ATATAATGTACACAAAAAAG+AGG | + | chr1_4:6917451-6917470 | None:intergenic | 20.0% |
| !! | CATTGAATGTTTAATGTATT+TGG | + | chr1_4:6917560-6917579 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAATCACTTTTT+AGG | + | chr1_4:6917585-6917604 | None:intergenic | 20.0% |
| !! | TATCAATTCTTAAATTCTCA+TGG | - | chr1_4:6918221-6918240 | Msa0147050:CDS | 20.0% |
| ! | CAGTTACCATTAAAAAGAAA+AGG | + | chr1_4:6913173-6913192 | None:intergenic | 25.0% |
| ! | TAAAGTAGTGTTTAATAGAC+AGG | + | chr1_4:6913743-6913762 | None:intergenic | 25.0% |
| ! | TTTGGAAGTTTGTATTATGA+GGG | - | chr1_4:6913992-6914011 | Msa0147050:intron | 25.0% |
| ! | AATAAAACTCACAAAAACTG+AGG | + | chr1_4:6914053-6914072 | None:intergenic | 25.0% |
| !!! | CAGTTTTTGTGAGTTTTATT+AGG | - | chr1_4:6914053-6914072 | Msa0147050:intron | 25.0% |
| ! | TACTTTCTTTCTATTGCTTT+AGG | - | chr1_4:6914173-6914192 | Msa0147050:intron | 25.0% |
| ! | TTAAAGCCTTCACTTAATTT+GGG | + | chr1_4:6914492-6914511 | None:intergenic | 25.0% |
| !! | CATTATACTAGATTGGATTT+TGG | + | chr1_4:6914631-6914650 | None:intergenic | 25.0% |
| ! | GGAATTTCATTATACTAGAT+TGG | + | chr1_4:6914638-6914657 | None:intergenic | 25.0% |
| ! | GAATTCAAAAATTGTATTGG+AGG | + | chr1_4:6915529-6915548 | None:intergenic | 25.0% |
| ! | AGGGAATTCAAAAATTGTAT+TGG | + | chr1_4:6915532-6915551 | None:intergenic | 25.0% |
| ! | TGGAAAAAATAGAGAACTTT+GGG | + | chr1_4:6915605-6915624 | None:intergenic | 25.0% |
| ! | ATCACATATGAAAAAGTGAT+AGG | + | chr1_4:6915771-6915790 | None:intergenic | 25.0% |
| ! | TGAAATGAAAAAACATTTGC+AGG | - | chr1_4:6915943-6915962 | Msa0147050:intron | 25.0% |
| ! | TAATCATTGTTCAGACAATT+TGG | + | chr1_4:6916176-6916195 | None:intergenic | 25.0% |
| ! | AGTATTTGTAGAATGATTTC+TGG | + | chr1_4:6916339-6916358 | None:intergenic | 25.0% |
| ! | GAAAAAAGCAAGAAATACAA+GGG | - | chr1_4:6916395-6916414 | Msa0147050:CDS | 25.0% |
| ! | ATTGAATGATATGTATCCTA+AGG | - | chr1_4:6916604-6916623 | Msa0147050:CDS | 25.0% |
| ! | AAAAAAGATGAATTCACCTT+AGG | + | chr1_4:6916623-6916642 | None:intergenic | 25.0% |
| !!! | AGACCTATTTTTTTTTCACT+TGG | - | chr1_4:6916900-6916919 | Msa0147050:CDS | 25.0% |
| ! | TCACCAAGTGAAAAAAAAAT+AGG | + | chr1_4:6916906-6916925 | None:intergenic | 25.0% |
| !! | AAACAAATTTAAGTTAGCTG+CGG | - | chr1_4:6916962-6916981 | Msa0147050:CDS | 25.0% |
| !! | TTTTCAACCTCAATTCAATT+TGG | + | chr1_4:6916988-6917007 | None:intergenic | 25.0% |
| !!! | AGGTTGAAAATGATTTTTTG+TGG | - | chr1_4:6916998-6917017 | Msa0147050:CDS | 25.0% |
| ! | AATTAAGTGATAATTCAGCA+TGG | - | chr1_4:6917057-6917076 | Msa0147050:intron | 25.0% |
| !! | GGATTTTTCTAATGTATACA+AGG | - | chr1_4:6917136-6917155 | Msa0147050:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr1_4:6917595-6917614 | None:intergenic | 25.0% |
| !!! | TAAGCAAAAAACCACTTTTT+AGG | - | chr1_4:6917495-6917514 | Msa0147050:intron | 25.0% |
| ! | CATTCAACACTTAATGTATT+TGG | - | chr1_4:6917520-6917539 | Msa0147050:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr1_4:6917595-6917614 | Msa0147050:intron | 25.0% |
| ! | GGAGTATATGTTAAAATTTC+TGG | - | chr1_4:6917620-6917639 | Msa0147050:intron | 25.0% |
| ! | TTTATAGATTAGCACTTACT+TGG | + | chr1_4:6917978-6917997 | None:intergenic | 25.0% |
| ! | AGTAAGTGCTAATCTATAAA+AGG | - | chr1_4:6917978-6917997 | Msa0147050:intron | 25.0% |
| ! | CTTAAATTCTCATGGAAAAA+AGG | - | chr1_4:6918229-6918248 | Msa0147050:CDS | 25.0% |
| !!! | GACTAGTTTTTGTTTCTTTT+AGG | - | chr1_4:6918289-6918308 | Msa0147050:intron | 25.0% |
| !!! | TTAGGCATAGTTTTAAAACT+CGG | - | chr1_4:6918307-6918326 | Msa0147050:intron | 25.0% |
| ! | CATAGACAGATATAATCTTA+AGG | + | chr1_4:6918452-6918471 | None:intergenic | 25.0% |
| ATGAATATAGAGAGAGAATG+AGG | + | chr1_4:6912902-6912921 | None:intergenic | 30.0% | |
| ATGAGAATGAGAATGAATCA+TGG | - | chr1_4:6912928-6912947 | Msa0147050:three_prime_UTR | 30.0% | |
| CCAACTAAGATTACCAAAAT+GGG | + | chr1_4:6913006-6913025 | None:intergenic | 30.0% | |
| ACCAACTAAGATTACCAAAA+TGG | + | chr1_4:6913007-6913026 | None:intergenic | 30.0% | |
| ! | CATTTTATCGAACAGGTAAA+AGG | + | chr1_4:6913122-6913141 | None:intergenic | 30.0% |
| ! | TTAATCTGTGTTGTTCTCTT+TGG | - | chr1_4:6913301-6913320 | Msa0147050:CDS | 30.0% |
| !!! | CTTTGGTTTCACTTTTTCAT+TGG | - | chr1_4:6913318-6913337 | Msa0147050:CDS | 30.0% |
| GTATGAAAATATCCAAGATC+AGG | + | chr1_4:6913569-6913588 | None:intergenic | 30.0% | |
| ! | TTTTCATACACGCCTATATT+TGG | - | chr1_4:6913580-6913599 | Msa0147050:CDS | 30.0% |
| GAAGATCCTATGCAATTTAT+GGG | - | chr1_4:6913602-6913621 | Msa0147050:intron | 30.0% | |
| !!! | TGTTTTTGGATTGAGGATAA+GGG | - | chr1_4:6913921-6913940 | Msa0147050:intron | 30.0% |
| GTTTGGAAGTTTGTATTATG+AGG | - | chr1_4:6913991-6914010 | Msa0147050:intron | 30.0% | |
| CCAAGAGATTATTATAGTTG+CGG | + | chr1_4:6914084-6914103 | None:intergenic | 30.0% | |
| !!! | GGTCAGATTTTTTAAAGCTT+CGG | - | chr1_4:6914313-6914332 | Msa0147050:intron | 30.0% |
| !!! | GTCAGATTTTTTAAAGCTTC+GGG | - | chr1_4:6914314-6914333 | Msa0147050:intron | 30.0% |
| !!! | TCAGATTTTTTAAAGCTTCG+GGG | - | chr1_4:6914315-6914334 | Msa0147050:intron | 30.0% |
| AACTGCATGGATATCTATTT+GGG | + | chr1_4:6914346-6914365 | None:intergenic | 30.0% | |
| GTTAAAGCCTTCACTTAATT+TGG | + | chr1_4:6914493-6914512 | None:intergenic | 30.0% | |
| ! | TAACCGAATAACATTTTGTC+AGG | - | chr1_4:6914509-6914528 | Msa0147050:CDS | 30.0% |
| ! | AACCGAATAACATTTTGTCA+GGG | - | chr1_4:6914510-6914529 | Msa0147050:CDS | 30.0% |
| GCATCTAAAGAAAATACCAT+TGG | - | chr1_4:6914687-6914706 | Msa0147050:CDS | 30.0% | |
| !!! | ATCATTTTTTCCAGAAGTCT+GGG | + | chr1_4:6914724-6914743 | None:intergenic | 30.0% |
| !!! | AATCATTTTTTCCAGAAGTC+TGG | + | chr1_4:6914725-6914744 | None:intergenic | 30.0% |
| ! | TATATCTTTTGACCCTAACT+TGG | + | chr1_4:6914793-6914812 | None:intergenic | 30.0% |
| TTAGGGTCAAAAGATATAGA+AGG | - | chr1_4:6914795-6914814 | Msa0147050:CDS | 30.0% | |
| AAATCTGCTGTTGAAATAGA+TGG | + | chr1_4:6914891-6914910 | None:intergenic | 30.0% | |
| AGCAGATATTATTGTTGAGA+AGG | - | chr1_4:6914932-6914951 | Msa0147050:CDS | 30.0% | |
| TCAAAAATTGTATTGGAGGA+GGG | + | chr1_4:6915525-6915544 | None:intergenic | 30.0% | |
| TTCAAAAATTGTATTGGAGG+AGG | + | chr1_4:6915526-6915545 | None:intergenic | 30.0% | |
| ! | TTTTTGAATTCCCTGAAATG+AGG | - | chr1_4:6915538-6915557 | Msa0147050:intron | 30.0% |
| CATAATTTCTCCTCATTTCA+GGG | + | chr1_4:6915551-6915570 | None:intergenic | 30.0% | |
| TCATAATTTCTCCTCATTTC+AGG | + | chr1_4:6915552-6915571 | None:intergenic | 30.0% | |
| GTGGAAAAAATAGAGAACTT+TGG | + | chr1_4:6915606-6915625 | None:intergenic | 30.0% | |
| !!! | TTAGTTTTAACTCATTTCCC+AGG | - | chr1_4:6915839-6915858 | Msa0147050:intron | 30.0% |
| !!! | TAGTTTTAACTCATTTCCCA+GGG | - | chr1_4:6915840-6915859 | Msa0147050:intron | 30.0% |
| TGAAAACATATTCTATCCCT+GGG | + | chr1_4:6915859-6915878 | None:intergenic | 30.0% | |
| !!! | TAAACCTGTCATTTTTCACA+TGG | - | chr1_4:6915911-6915930 | Msa0147050:intron | 30.0% |
| !!! | AAGAGTCTTTGCTTTTTCTT+TGG | + | chr1_4:6916042-6916061 | None:intergenic | 30.0% |
| CTGAACAATGATTATGAAAG+AGG | - | chr1_4:6916182-6916201 | Msa0147050:CDS | 30.0% | |
| ! | AAGGTTTTGCATCAATTGTT+AGG | - | chr1_4:6916243-6916262 | Msa0147050:CDS | 30.0% |
| GTACATCAAAATGAAAACCT+TGG | - | chr1_4:6916272-6916291 | Msa0147050:CDS | 30.0% | |
| AAACCTTGGAAAAAAGTCTT+TGG | - | chr1_4:6916286-6916305 | Msa0147050:CDS | 30.0% | |
| GGAAAAAAGCAAGAAATACA+AGG | - | chr1_4:6916394-6916413 | Msa0147050:CDS | 30.0% | |
| ATTTAAAGAGTCAAGCATGT+CGG | + | chr1_4:6916659-6916678 | None:intergenic | 30.0% | |
| !!! | ACAAAAACATGTTTTGGTGT+TGG | - | chr1_4:6916712-6916731 | Msa0147050:CDS | 30.0% |
| !!! | TGAAAATGATTTTTTGTGGC+TGG | - | chr1_4:6917002-6917021 | Msa0147050:CDS | 30.0% |
| !!! | GAAAATGATTTTTTGTGGCT+GGG | - | chr1_4:6917003-6917022 | Msa0147050:CDS | 30.0% |
| AATTATCTGTTTGCATGTGT+TGG | - | chr1_4:6917209-6917228 | Msa0147050:intron | 30.0% | |
| ! | ACGATCGAGTTATTTCATAT+TGG | + | chr1_4:6917240-6917259 | None:intergenic | 30.0% |
| TGTTGAATGAACCTAAAAAG+TGG | + | chr1_4:6917509-6917528 | None:intergenic | 30.0% | |
| !! | ATTTTAACATATACTCCCTC+CGG | + | chr1_4:6917617-6917636 | None:intergenic | 30.0% |
| ACATTTACATGTTATTAGCC+AGG | - | chr1_4:6917682-6917701 | Msa0147050:intron | 30.0% | |
| ! | ATTTGAAGAATAAGAAGCAC+TGG | - | chr1_4:6917720-6917739 | Msa0147050:intron | 30.0% |
| CTCAGTAGATATAATTGATG+AGG | - | chr1_4:6917772-6917791 | Msa0147050:intron | 30.0% | |
| ! | ATTGATGAGGTATCTATTCA+TGG | - | chr1_4:6917785-6917804 | Msa0147050:intron | 30.0% |
| TACTAATATGCGACTTTAAG+CGG | + | chr1_4:6917895-6917914 | None:intergenic | 30.0% | |
| ATATATACGTAGACTCATCT+TGG | - | chr1_4:6918014-6918033 | Msa0147050:intron | 30.0% | |
| TATTCGTGGTAAAATTTGCA+AGG | - | chr1_4:6918137-6918156 | Msa0147050:intron | 30.0% | |
| ATTGTATTGAACTGATGACT+CGG | - | chr1_4:6918488-6918507 | Msa0147050:five_prime_UTR | 30.0% | |
| !!! | AGTTGTGATGTGTCACTTTT+GGG | + | chr1_4:6912785-6912804 | None:intergenic | 35.0% |
| CTTGTTCAGGATTCTATGAT+CGG | + | chr1_4:6912811-6912830 | None:intergenic | 35.0% | |
| AAGAATCTCGTATTCGAACA+TGG | - | chr1_4:6912834-6912853 | Msa0147050:three_prime_UTR | 35.0% | |
| AGAATGAGGAAGGTTATAGA+AGG | + | chr1_4:6912888-6912907 | None:intergenic | 35.0% | |
| ATATAGAGAGAGAATGAGGA+AGG | + | chr1_4:6912898-6912917 | None:intergenic | 35.0% | |
| !! | CCCATTTTGGTAATCTTAGT+TGG | - | chr1_4:6913003-6913022 | Msa0147050:three_prime_UTR | 35.0% |
| GCATAGGATCTTCCAAATAT+AGG | + | chr1_4:6913595-6913614 | None:intergenic | 35.0% | |
| GGAAGATCCTATGCAATTTA+TGG | - | chr1_4:6913601-6913620 | Msa0147050:intron | 35.0% | |
| AGAACACCCATAAATTGCAT+AGG | + | chr1_4:6913611-6913630 | None:intergenic | 35.0% | |
| GTAGTGTTTAATAGACAGGT+TGG | + | chr1_4:6913739-6913758 | None:intergenic | 35.0% | |
| !!! | TTCTAGGTGTTTTTGGATTG+AGG | - | chr1_4:6913914-6913933 | Msa0147050:intron | 35.0% |
| !!! | GTGTTTTTGGATTGAGGATA+AGG | - | chr1_4:6913920-6913939 | Msa0147050:intron | 35.0% |
| GAAGTTTGTATTATGAGGGA+AGG | - | chr1_4:6913996-6914015 | Msa0147050:intron | 35.0% | |
| CCGCAACTATAATAATCTCT+TGG | - | chr1_4:6914081-6914100 | Msa0147050:intron | 35.0% | |
| !! | CTATTGCTTTAGGACACTAT+TGG | - | chr1_4:6914183-6914202 | Msa0147050:intron | 35.0% |
| !! | CTTTAGGACACTATTGGAAA+CGG | - | chr1_4:6914189-6914208 | Msa0147050:intron | 35.0% |
| GCAATCTTAATAGAGAACAG+CGG | - | chr1_4:6914292-6914311 | Msa0147050:intron | 35.0% | |
| CAACTGCATGGATATCTATT+TGG | + | chr1_4:6914347-6914366 | None:intergenic | 35.0% | |
| CACCCTGACAAAATGTTATT+CGG | + | chr1_4:6914515-6914534 | None:intergenic | 35.0% | |
| !!! | CTAGATTGGATTTTGGAATC+TGG | + | chr1_4:6914624-6914643 | None:intergenic | 35.0% |
| GAAATTCCTGAAAAAGGTAG+AGG | - | chr1_4:6914650-6914669 | Msa0147050:CDS | 35.0% | |
| TCTTTAGATGCAGTATCAAC+TGG | + | chr1_4:6914678-6914697 | None:intergenic | 35.0% | |
| TTTGTCCATATCTTTGCAGA+GGG | + | chr1_4:6914748-6914767 | None:intergenic | 35.0% | |
| ! | TTTTGTCCATATCTTTGCAG+AGG | + | chr1_4:6914749-6914768 | None:intergenic | 35.0% |
| AAGAGAAACTTGATTGTGAC+AGG | + | chr1_4:6914844-6914863 | None:intergenic | 35.0% | |
| TTTCCAATTCAACCATGACA+AGG | - | chr1_4:6914908-6914927 | Msa0147050:CDS | 35.0% | |
| ! | TGCAGAGTACTCAAATAAGA+TGG | - | chr1_4:6914956-6914975 | Msa0147050:CDS | 35.0% |
| ! | GCAGAGTACTCAAATAAGAT+GGG | - | chr1_4:6914957-6914976 | Msa0147050:CDS | 35.0% |
| ! | CAGAGTACTCAAATAAGATG+GGG | - | chr1_4:6914958-6914977 | Msa0147050:CDS | 35.0% |
| GTCCTTAGTTAAATCCAAAG+CGG | - | chr1_4:6915028-6915047 | Msa0147050:CDS | 35.0% | |
| AACATGGGTAAAGAACTTCT+GGG | + | chr1_4:6915072-6915091 | None:intergenic | 35.0% | |
| CTAACTATCTACTTCAGCAT+TGG | + | chr1_4:6915209-6915228 | None:intergenic | 35.0% | |
| TATGATATGCTGTGTGTTTG+AGG | - | chr1_4:6915284-6915303 | Msa0147050:intron | 35.0% | |
| !! | TTTTGGGTGGTAGGAAATAT+AGG | - | chr1_4:6915339-6915358 | Msa0147050:intron | 35.0% |
| TTTGGGTGGTAGGAAATATA+GGG | - | chr1_4:6915340-6915359 | Msa0147050:intron | 35.0% | |
| ! | AAAATAGAGAACTTTGGGAG+AGG | + | chr1_4:6915600-6915619 | None:intergenic | 35.0% |
| !! | GAGGGTTTTTGAAAAAAGGA+AGG | + | chr1_4:6915634-6915653 | None:intergenic | 35.0% |
| TTAACAGAAACCTCCTATTG+TGG | + | chr1_4:6915713-6915732 | None:intergenic | 35.0% | |
| TGCGATCAAATTCTAGACTA+AGG | - | chr1_4:6915745-6915764 | Msa0147050:intron | 35.0% | |
| CAATAAGCAAGCTTAAGCAT+TGG | + | chr1_4:6915807-6915826 | None:intergenic | 35.0% | |
| CTGAAAACATATTCTATCCC+TGG | + | chr1_4:6915860-6915879 | None:intergenic | 35.0% | |
| !! | TCATTTTTCACATGGTCTCT+TGG | - | chr1_4:6915919-6915938 | Msa0147050:intron | 35.0% |
| TCCAAGGACATGTATGATAT+GGG | + | chr1_4:6916132-6916151 | None:intergenic | 35.0% | |
| GGTCTTTGTGGATTCATATT+AGG | + | chr1_4:6916155-6916174 | None:intergenic | 35.0% | |
| ! | TTCAGACAATTTGGTCTTTG+TGG | + | chr1_4:6916167-6916186 | None:intergenic | 35.0% |
| GCTTATGCATCACTATTTGA+AGG | - | chr1_4:6916224-6916243 | Msa0147050:CDS | 35.0% | |
| TGCATCAATTGTTAGGAACA+CGG | - | chr1_4:6916250-6916269 | Msa0147050:CDS | 35.0% | |
| !!! | ACTCCAAAGACTTTTTTCCA+AGG | + | chr1_4:6916292-6916311 | None:intergenic | 35.0% |
| TTTCAGGATGCATAGCTATT+AGG | + | chr1_4:6916541-6916560 | None:intergenic | 35.0% | |
| ! | TATGCATCCTGAAAAGCATA+AGG | - | chr1_4:6916547-6916566 | Msa0147050:CDS | 35.0% |
| ! | AAGTCATCCTTATGCTTTTC+AGG | + | chr1_4:6916557-6916576 | None:intergenic | 35.0% |
| !! | TGACTTGCTTGAAATTTCAG+AGG | - | chr1_4:6916571-6916590 | Msa0147050:CDS | 35.0% |
| TCAGCATGGAAACAGTTAAA+AGG | - | chr1_4:6917071-6917090 | Msa0147050:intron | 35.0% | |
| GTACTATTGTTATGCTGAGA+AGG | - | chr1_4:6917258-6917277 | Msa0147050:intron | 35.0% | |
| TCTACAAGTAGCTTAAGTCA+TGG | - | chr1_4:6917285-6917304 | Msa0147050:intron | 35.0% | |
| ! | ATTTTTATGGGCATGCTTCT+AGG | - | chr1_4:6917322-6917341 | Msa0147050:intron | 35.0% |
| AAACCTTATCCCACTAAATG+GGG | + | chr1_4:6917353-6917372 | None:intergenic | 35.0% | |
| CAAACCTTATCCCACTAAAT+GGG | + | chr1_4:6917354-6917373 | None:intergenic | 35.0% | |
| ! | TAAGGTTTGGTTGTTGTTGT+TGG | - | chr1_4:6917365-6917384 | Msa0147050:intron | 35.0% |
| ACAGATAACACCTAAAAGCA+TGG | + | chr1_4:6917391-6917410 | None:intergenic | 35.0% | |
| CATTATATACATACTCCCTC+CGG | - | chr1_4:6917463-6917482 | Msa0147050:intron | 35.0% | |
| AAATGTAGTTGTCGCATTGA+AGG | + | chr1_4:6917668-6917687 | None:intergenic | 35.0% | |
| !! | AATGTTTTGAGTCAAAGTCC+TGG | + | chr1_4:6917703-6917722 | None:intergenic | 35.0% |
| ! | GATGTGCACTTTTACATTTG+TGG | + | chr1_4:6917862-6917881 | None:intergenic | 35.0% |
| ACTAATATGCGACTTTAAGC+GGG | + | chr1_4:6917894-6917913 | None:intergenic | 35.0% | |
| !!! | GCTAATTGTTTTTGAACTGC+TGG | - | chr1_4:6918066-6918085 | Msa0147050:intron | 35.0% |
| TTGTAAATCTGTAGTTCAGC+TGG | - | chr1_4:6918254-6918273 | Msa0147050:intron | 35.0% | |
| TGTAAATCTGTAGTTCAGCT+GGG | - | chr1_4:6918255-6918274 | Msa0147050:intron | 35.0% | |
| !!! | CATAGTTTTAAAACTCGGCT+CGG | - | chr1_4:6918312-6918331 | Msa0147050:intron | 35.0% |
| TTTAATCCGATTCAGTCATG+CGG | + | chr1_4:6918403-6918422 | None:intergenic | 35.0% | |
| ATGACTGAATCGGATTAAAC+CGG | - | chr1_4:6918404-6918423 | Msa0147050:exon | 35.0% | |
| ACAGATATAATCTTAAGGCC+GGG | + | chr1_4:6918447-6918466 | None:intergenic | 35.0% | |
| GACAGATATAATCTTAAGGC+CGG | + | chr1_4:6918448-6918467 | None:intergenic | 35.0% | |
| !!! | TTTTGGGGTTCAAGACAACA+TGG | + | chr1_4:6912769-6912788 | None:intergenic | 40.0% |
| !!! | GTTGTGATGTGTCACTTTTG+GGG | + | chr1_4:6912784-6912803 | None:intergenic | 40.0% |
| !!! | GAGTTGTGATGTGTCACTTT+TGG | + | chr1_4:6912786-6912805 | None:intergenic | 40.0% |
| CGAGATTCTTGTTCTTGTTC+AGG | + | chr1_4:6912824-6912843 | None:intergenic | 40.0% | |
| ATCGAACAGGTAAAAGGCAA+AGG | + | chr1_4:6913116-6913135 | None:intergenic | 40.0% | |
| !! | AGTGAGGCATTTTATCGAAC+AGG | + | chr1_4:6913129-6913148 | None:intergenic | 40.0% |
| TGTTCGATAAAATGCCTCAC+TGG | - | chr1_4:6913128-6913147 | Msa0147050:three_prime_UTR | 40.0% | |
| GTTCGATAAAATGCCTCACT+GGG | - | chr1_4:6913129-6913148 | Msa0147050:three_prime_UTR | 40.0% | |
| GCATATAACATCGTGTGTTG+CGG | - | chr1_4:6913273-6913292 | Msa0147050:exon | 40.0% | |
| CATATAACATCGTGTGTTGC+GGG | - | chr1_4:6913274-6913293 | Msa0147050:exon | 40.0% | |
| ATAGCCCTGTGTTGAATCAA+GGG | - | chr1_4:6913494-6913513 | Msa0147050:CDS | 40.0% | |
| AGATCAGGATGAAGATCGAA+AGG | + | chr1_4:6913554-6913573 | None:intergenic | 40.0% | |
| TTCGATCTTCATCCTGATCT+TGG | - | chr1_4:6913554-6913573 | Msa0147050:CDS | 40.0% | |
| !!! | TTCTAGTTTTAGTCTGCACG+AGG | - | chr1_4:6913627-6913646 | Msa0147050:intron | 40.0% |
| !!! | TCTAGTTTTAGTCTGCACGA+GGG | - | chr1_4:6913628-6913647 | Msa0147050:intron | 40.0% |
| ! | TAGTGTGTTTGATAACCCTG+AGG | - | chr1_4:6913761-6913780 | Msa0147050:intron | 40.0% |
| ATAACCCTGAGGTGAATCAA+GGG | - | chr1_4:6913772-6913791 | Msa0147050:intron | 40.0% | |
| AGAACACGCATTAACTGCTT+AGG | + | chr1_4:6913873-6913892 | None:intergenic | 40.0% | |
| !! | TTCTAGTTCTAGTCTGCTTG+AGG | - | chr1_4:6913889-6913908 | Msa0147050:intron | 40.0% |
| !! | TCTAGTTCTAGTCTGCTTGA+GGG | - | chr1_4:6913890-6913909 | Msa0147050:intron | 40.0% |
| ATTCTTCATTCCCCACTTAG+TGG | - | chr1_4:6913945-6913964 | Msa0147050:intron | 40.0% | |
| TTCTTCATTCCCCACTTAGT+GGG | - | chr1_4:6913946-6913965 | Msa0147050:intron | 40.0% | |
| !! | GCTTGGTTCTTGTTGTTGTT+TGG | - | chr1_4:6913974-6913993 | Msa0147050:intron | 40.0% |
| ATTATGAGGGAAGGAAAGTG+AGG | - | chr1_4:6914005-6914024 | Msa0147050:intron | 40.0% | |
| AATCTACCTGCTTTGATTGC+AGG | - | chr1_4:6914118-6914137 | Msa0147050:intron | 40.0% | |
| ACTATTGGAAACGGTAAAGC+AGG | - | chr1_4:6914198-6914217 | Msa0147050:intron | 40.0% | |
| ! | GGAAGAGTGTATTCATTGAC+AGG | - | chr1_4:6914268-6914287 | Msa0147050:intron | 40.0% |
| AAATACACAGCTTAGCAGGA+AGG | + | chr1_4:6914377-6914396 | None:intergenic | 40.0% | |
| TCTCGATCTGTTAAACGATC+TGG | - | chr1_4:6914396-6914415 | Msa0147050:CDS | 40.0% | |
| CTCGATCTGTTAAACGATCT+GGG | - | chr1_4:6914397-6914416 | Msa0147050:CDS | 40.0% | |
| CATGAAGGAAATTTGCAAGG+TGG | - | chr1_4:6914420-6914439 | Msa0147050:CDS | 40.0% | |
| GAGTTGCCCAAATTAAGTGA+AGG | - | chr1_4:6914483-6914502 | Msa0147050:CDS | 40.0% | |
| ATATCAAAAACTTGGGCCAC+TGG | - | chr1_4:6914563-6914582 | Msa0147050:intron | 40.0% | |
| TGATTCCCTCTGCAAAGATA+TGG | - | chr1_4:6914740-6914759 | Msa0147050:CDS | 40.0% | |
| CGCATGCTAATTCCAAGTTA+GGG | - | chr1_4:6914778-6914797 | Msa0147050:CDS | 40.0% | |
| ! | TCTTGATGATATTCCGACTC+TGG | - | chr1_4:6914860-6914879 | Msa0147050:CDS | 40.0% |
| ATAGATGGAAATGCCAGAGT+CGG | + | chr1_4:6914876-6914895 | None:intergenic | 40.0% | |
| TAATATCTGCTGCCTTGTCA+TGG | + | chr1_4:6914923-6914942 | None:intergenic | 40.0% | |
| CAAGTCAACTAGAACAAGTC+TGG | + | chr1_4:6914988-6915007 | None:intergenic | 40.0% | |
| !! | TGCCGCTTTGGATTTAACTA+AGG | + | chr1_4:6915033-6915052 | None:intergenic | 40.0% |
| CAACATGGGTAAAGAACTTC+TGG | + | chr1_4:6915073-6915092 | None:intergenic | 40.0% | |
| CAGAAGTTCTTTACCCATGT+TGG | - | chr1_4:6915071-6915090 | Msa0147050:CDS | 40.0% | |
| ATCACTCGCCTTTATTCAAC+TGG | - | chr1_4:6915098-6915117 | Msa0147050:CDS | 40.0% | |
| GCAAACCTCCAGTTGAATAA+AGG | + | chr1_4:6915109-6915128 | None:intergenic | 40.0% | |
| ! | TTTTCACACATGCAGTTCTG+AGG | + | chr1_4:6915252-6915271 | None:intergenic | 40.0% |
| !! | TGTGTGTTTGAGGCTTTGTT+TGG | - | chr1_4:6915294-6915313 | Msa0147050:intron | 40.0% |
| !! | GTGTGTTTGAGGCTTTGTTT+GGG | - | chr1_4:6915295-6915314 | Msa0147050:intron | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr1_4:6915519-6915538 | None:intergenic | 40.0% |
| AAGAAAAATGAACCCCCCAA+AGG | - | chr1_4:6915571-6915590 | Msa0147050:intron | 40.0% | |
| TGAAAAAAGGAAGGAGCAAG+TGG | + | chr1_4:6915625-6915644 | None:intergenic | 40.0% | |
| !! | AGGGGAGGGTTTTTGAAAAA+AGG | + | chr1_4:6915638-6915657 | None:intergenic | 40.0% |
| TAGCTGTCTGATACCACAAT+AGG | - | chr1_4:6915697-6915716 | Msa0147050:intron | 40.0% | |
| GAGACCATGTGAAAAATGAC+AGG | + | chr1_4:6915918-6915937 | None:intergenic | 40.0% | |
| AAAGCAAAGACTCTTTCACC+TGG | - | chr1_4:6916047-6916066 | Msa0147050:intron | 40.0% | |
| AAGCAAAGACTCTTTCACCT+GGG | - | chr1_4:6916048-6916067 | Msa0147050:intron | 40.0% | |
| AAGGAGAAGATGAAGGTAGA+GGG | + | chr1_4:6916088-6916107 | None:intergenic | 40.0% | |
| AAAGGAGAAGATGAAGGTAG+AGG | + | chr1_4:6916089-6916108 | None:intergenic | 40.0% | |
| GTGAACAAAGGAGAAGATGA+AGG | + | chr1_4:6916095-6916114 | None:intergenic | 40.0% | |
| ACCCATATCATACATGTCCT+TGG | - | chr1_4:6916128-6916147 | Msa0147050:CDS | 40.0% | |
| GTCCAAGGACATGTATGATA+TGG | + | chr1_4:6916133-6916152 | None:intergenic | 40.0% | |
| GTGGATTCATATTAGGTCCA+AGG | + | chr1_4:6916148-6916167 | None:intergenic | 40.0% | |
| TGATTATGAAAGAGGCTGCA+AGG | - | chr1_4:6916190-6916209 | Msa0147050:CDS | 40.0% | |
| ATAGTGATGCATAAGCATCC+TGG | + | chr1_4:6916220-6916239 | None:intergenic | 40.0% | |
| AGTAAGAGAGATGCTGATCA+TGG | - | chr1_4:6916368-6916387 | Msa0147050:CDS | 40.0% | |
| AAATACAAGGGAACCCTTGA+TGG | - | chr1_4:6916407-6916426 | Msa0147050:CDS | 40.0% | |
| !!! | TGGTTTTGACACGACCTTTA+CGG | - | chr1_4:6916427-6916446 | Msa0147050:CDS | 40.0% |
| !! | TTCATCTCTAGAACCCGTAA+AGG | + | chr1_4:6916444-6916463 | None:intergenic | 40.0% |
| !! | TACGGGTTCTAGAGATGAAA+AGG | - | chr1_4:6916445-6916464 | Msa0147050:CDS | 40.0% |
| TCAGAGCATAAAAGAACCGA+TGG | - | chr1_4:6916473-6916492 | Msa0147050:CDS | 40.0% | |
| CAGAGCATAAAAGAACCGAT+GGG | - | chr1_4:6916474-6916493 | Msa0147050:CDS | 40.0% | |
| TGAATTTCTCTGTGCTTTGC+AGG | - | chr1_4:6916688-6916707 | Msa0147050:CDS | 40.0% | |
| ! | GCAGGCACAAAAACATGTTT+TGG | - | chr1_4:6916706-6916725 | Msa0147050:CDS | 40.0% |
| !!! | AACATGTTTTGGTGTTGGCA+CGG | - | chr1_4:6916717-6916736 | Msa0147050:CDS | 40.0% |
| TGTCCAAAATGAGCACCTTT+CGG | - | chr1_4:6916766-6916785 | Msa0147050:CDS | 40.0% | |
| !!! | ATACCGAAAGGTGCTCATTT+TGG | + | chr1_4:6916772-6916791 | None:intergenic | 40.0% |
| ! | AGCACCTTTCGGTATTGAAA+AGG | - | chr1_4:6916777-6916796 | Msa0147050:CDS | 40.0% |
| ! | GCATCCTTTTCAATACCGAA+AGG | + | chr1_4:6916784-6916803 | None:intergenic | 40.0% |
| ATTGAAAAGGATGCACACAG+TGG | - | chr1_4:6916790-6916809 | Msa0147050:CDS | 40.0% | |
| TTGAAAAGGATGCACACAGT+GGG | - | chr1_4:6916791-6916810 | Msa0147050:CDS | 40.0% | |
| ! | TGCACACAGTGGGTTTAAAA+TGG | - | chr1_4:6916801-6916820 | Msa0147050:CDS | 40.0% |
| ! | GCACACAGTGGGTTTAAAAT+GGG | - | chr1_4:6916802-6916821 | Msa0147050:CDS | 40.0% |
| CTTGAGTGAGAATTCTTCAC+TGG | - | chr1_4:6916835-6916854 | Msa0147050:CDS | 40.0% | |
| ATTTCGCCTTGGATATCACT+CGG | - | chr1_4:6916859-6916878 | Msa0147050:CDS | 40.0% | |
| AATGATCCTTAGAGTGTGCA+AGG | + | chr1_4:6917164-6917183 | None:intergenic | 40.0% | |
| CCAAACCTTATCCCACTAAA+TGG | + | chr1_4:6917355-6917374 | None:intergenic | 40.0% | |
| CCATTTAGTGGGATAAGGTT+TGG | - | chr1_4:6917352-6917371 | Msa0147050:intron | 40.0% | |
| !! | TTGTTGTTGGCCATGCTTTT+AGG | - | chr1_4:6917378-6917397 | Msa0147050:intron | 40.0% |
| TGCTTATAAATGTGACCGGA+GGG | + | chr1_4:6917599-6917618 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr1_4:6917598-6917617 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr1_4:6917598-6917617 | Msa0147050:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr1_4:6917599-6917618 | Msa0147050:intron | 40.0% | |
| CTAATATGCGACTTTAAGCG+GGG | + | chr1_4:6917893-6917912 | None:intergenic | 40.0% | |
| TTACCACGAATATGTGCCTA+AGG | + | chr1_4:6918129-6918148 | None:intergenic | 40.0% | |
| GTTCAGGATTCTATGATCGG+AGG | + | chr1_4:6912808-6912827 | None:intergenic | 45.0% | |
| CTCGTATTCGAACATGGACA+TGG | - | chr1_4:6912840-6912859 | Msa0147050:three_prime_UTR | 45.0% | |
| ATGGACCTCGACAACAACAA+AGG | - | chr1_4:6912859-6912878 | Msa0147050:three_prime_UTR | 45.0% | |
| !! | GGAAACCTTTGTTGTTGTCG+AGG | + | chr1_4:6912867-6912886 | None:intergenic | 45.0% |
| ! | CGCAGATGCAAAACCCATTT+TGG | - | chr1_4:6912990-6913009 | Msa0147050:three_prime_UTR | 45.0% |
| ! | GTAATCTTAGTTGGTGCACC+TGG | - | chr1_4:6913012-6913031 | Msa0147050:three_prime_UTR | 45.0% |
| GAAATCCACCTTCTGTGAAG+AGG | - | chr1_4:6913041-6913060 | Msa0147050:three_prime_UTR | 45.0% | |
| CATAACCTCTTCACAGAAGG+TGG | + | chr1_4:6913049-6913068 | None:intergenic | 45.0% | |
| ACGCATAACCTCTTCACAGA+AGG | + | chr1_4:6913052-6913071 | None:intergenic | 45.0% | |
| AAGTACAGTGAAACCCAGTG+AGG | + | chr1_4:6913145-6913164 | None:intergenic | 45.0% | |
| GATAGCCCTGTGTTGAATCA+AGG | - | chr1_4:6913493-6913512 | Msa0147050:CDS | 45.0% | |
| CACACCCTTGATTCAACACA+GGG | + | chr1_4:6913501-6913520 | None:intergenic | 45.0% | |
| ACACACCCTTGATTCAACAC+AGG | + | chr1_4:6913502-6913521 | None:intergenic | 45.0% | |
| GATAACCCTGAGGTGAATCA+AGG | - | chr1_4:6913771-6913790 | Msa0147050:intron | 45.0% | |
| TAACCCTGAGGTGAATCAAG+GGG | - | chr1_4:6913773-6913792 | Msa0147050:intron | 45.0% | |
| ! | TGAGGGCTTCTAGGTGTTTT+TGG | - | chr1_4:6913907-6913926 | Msa0147050:intron | 45.0% |
| ATTCCCCACTTAGTGGGAAA+AGG | - | chr1_4:6913952-6913971 | Msa0147050:intron | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | + | chr1_4:6913958-6913977 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | + | chr1_4:6913959-6913978 | None:intergenic | 45.0% |
| ATGCTCTAGCAGCACTACTT+AGG | + | chr1_4:6914239-6914258 | None:intergenic | 45.0% | |
| !! | TAGTGCTGCTAGAGCATTGA+AGG | - | chr1_4:6914242-6914261 | Msa0147050:intron | 45.0% |
| !! | CTGCTAGAGCATTGAAGGAT+GGG | - | chr1_4:6914247-6914266 | Msa0147050:intron | 45.0% |
| GAAGGTCAAGTACAACTGCA+TGG | + | chr1_4:6914359-6914378 | None:intergenic | 45.0% | |
| CGAGAAATACACAGCTTAGC+AGG | + | chr1_4:6914381-6914400 | None:intergenic | 45.0% | |
| GTTAAACGATCTGGGCATGA+AGG | - | chr1_4:6914405-6914424 | Msa0147050:CDS | 45.0% | |
| GGGCATGAAGGAAATTTGCA+AGG | - | chr1_4:6914417-6914436 | Msa0147050:CDS | 45.0% | |
| AACCTTTCACATGGCTGCTT+CGG | - | chr1_4:6914588-6914607 | Msa0147050:intron | 45.0% | |
| ! | CTGGTACCTCTACCTTTTTC+AGG | + | chr1_4:6914659-6914678 | None:intergenic | 45.0% |
| TGGAATTAGCATGCGCTGTT+GGG | + | chr1_4:6914773-6914792 | None:intergenic | 45.0% | |
| TTGGAATTAGCATGCGCTGT+TGG | + | chr1_4:6914774-6914793 | None:intergenic | 45.0% | |
| GCGCATGCTAATTCCAAGTT+AGG | - | chr1_4:6914777-6914796 | Msa0147050:CDS | 45.0% | |
| GGTCAGACTGATAAATCTGC+TGG | - | chr1_4:6914816-6914835 | Msa0147050:CDS | 45.0% | |
| CTGCCTTGTCATGGTTGAAT+TGG | + | chr1_4:6914914-6914933 | None:intergenic | 45.0% | |
| ACTCGCCTTTATTCAACTGG+AGG | - | chr1_4:6915101-6915120 | Msa0147050:CDS | 45.0% | |
| TCATTGCAAATGCTGCGAAC+TGG | - | chr1_4:6915138-6915157 | Msa0147050:CDS | 45.0% | |
| !! | TGAGGCTTTGTTTGGGAGTT+TGG | - | chr1_4:6915302-6915321 | Msa0147050:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr1_4:6915306-6915325 | Msa0147050:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr1_4:6915307-6915326 | Msa0147050:intron | 45.0% |
| !!! | GGGTTTTGGAAGGTTTTGGA+GGG | + | chr1_4:6915505-6915524 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGGAAGGTTTTGG+AGG | + | chr1_4:6915506-6915525 | None:intergenic | 45.0% |
| !!! | AGGAGGGTTTTGGAAGGTTT+TGG | + | chr1_4:6915509-6915528 | None:intergenic | 45.0% |
| !!! | TATTGGAGGAGGGTTTTGGA+AGG | + | chr1_4:6915515-6915534 | None:intergenic | 45.0% |
| ! | ATAGAGAACTTTGGGAGAGG+AGG | + | chr1_4:6915597-6915616 | None:intergenic | 45.0% |
| ! | TAAGGCTTTGTCTGCGAGTT+TGG | + | chr1_4:6915661-6915680 | None:intergenic | 45.0% |
| AAACTCGCAGACAAAGCCTT+AGG | - | chr1_4:6915660-6915679 | Msa0147050:intron | 45.0% | |
| TAGCGATCGAGGAAATCCTA+AGG | + | chr1_4:6915679-6915698 | None:intergenic | 45.0% | |
| CTGTCTGATACCACAATAGG+AGG | - | chr1_4:6915700-6915719 | Msa0147050:intron | 45.0% | |
| ! | GCATCAATTTTTGATGCCGC+AGG | - | chr1_4:6915996-6916015 | Msa0147050:intron | 45.0% |
| TCTCCTTTGTTCACCAGAGA+AGG | - | chr1_4:6916101-6916120 | Msa0147050:intron | 45.0% | |
| ACACCTTCTCTGGTGAACAA+AGG | + | chr1_4:6916107-6916126 | None:intergenic | 45.0% | |
| GAGAGATGCTGATCATGGAT+TGG | - | chr1_4:6916373-6916392 | Msa0147050:CDS | 45.0% | |
| GGTCGTGTCAAAACCATCAA+GGG | + | chr1_4:6916423-6916442 | None:intergenic | 45.0% | |
| AGGTCGTGTCAAAACCATCA+AGG | + | chr1_4:6916424-6916443 | None:intergenic | 45.0% | |
| !! | GGTTTTGACACGACCTTTAC+GGG | - | chr1_4:6916428-6916447 | Msa0147050:CDS | 45.0% |
| ! | AAAGAAGGCATGGGGATCAT+GGG | - | chr1_4:6916502-6916521 | Msa0147050:CDS | 45.0% |
| ! | GCTCATTTTGGACATCTGAC+AGG | + | chr1_4:6916760-6916779 | None:intergenic | 45.0% |
| TCTTCACTGGTATTTCGCCT+TGG | - | chr1_4:6916848-6916867 | Msa0147050:CDS | 45.0% | |
| TGCATACCGAGTGATATCCA+AGG | + | chr1_4:6916868-6916887 | None:intergenic | 45.0% | |
| ! | AAGGTACCTTGCACACTCTA+AGG | - | chr1_4:6917155-6917174 | Msa0147050:intron | 45.0% |
| CTTATCCCACTAAATGGGGT+CGG | + | chr1_4:6917349-6917368 | None:intergenic | 45.0% | |
| TGACGACAAGCTACTGTCTA+TGG | - | chr1_4:6917826-6917845 | Msa0147050:intron | 45.0% | |
| AGCTACTGTCTATGGAGTTG+AGG | - | chr1_4:6917834-6917853 | Msa0147050:intron | 45.0% | |
| GACTTTAAGCGGGGTATGTT+TGG | + | chr1_4:6917884-6917903 | None:intergenic | 45.0% | |
| TCGAGTAGGTAAGCAGGAAA+GGG | + | chr1_4:6917929-6917948 | None:intergenic | 45.0% | |
| TTCGAGTAGGTAAGCAGGAA+AGG | + | chr1_4:6917930-6917949 | None:intergenic | 45.0% | |
| CCTGCTTACCTACTCGAAAA+CGG | - | chr1_4:6917932-6917951 | Msa0147050:intron | 45.0% | |
| CTGCTTACCTACTCGAAAAC+GGG | - | chr1_4:6917933-6917952 | Msa0147050:intron | 45.0% | |
| TCAATCTCCCAACTTCGCTT+TGG | - | chr1_4:6918089-6918108 | Msa0147050:intron | 45.0% | |
| CAATCTCCCAACTTCGCTTT+GGG | - | chr1_4:6918090-6918109 | Msa0147050:intron | 45.0% | |
| AATCTCCCAACTTCGCTTTG+GGG | - | chr1_4:6918091-6918110 | Msa0147050:intron | 45.0% | |
| TATGACCCCAAAGCGAAGTT+GGG | + | chr1_4:6918099-6918118 | None:intergenic | 45.0% | |
| GAATATGTGCCTAAGGACTG+TGG | + | chr1_4:6918122-6918141 | None:intergenic | 45.0% | |
| AGTCCTTAGGCACATATTCG+TGG | - | chr1_4:6918123-6918142 | Msa0147050:intron | 45.0% | |
| !! | ATCGACTCGGCATATGTACT+GGG | - | chr1_4:6918337-6918356 | Msa0147050:intron | 45.0% |
| GTTGAACCGCATGACTGAAT+CGG | - | chr1_4:6918394-6918413 | Msa0147050:CDS | 45.0% | |
| TCGGATTAAACCGGACAACT+CGG | - | chr1_4:6918413-6918432 | Msa0147050:exon | 45.0% | |
| !!! | GGTGTTTTAACCGAGTTGTC+CGG | + | chr1_4:6918426-6918445 | None:intergenic | 45.0% |
| GACAACTCGGTTAAAACACC+CGG | - | chr1_4:6918426-6918445 | Msa0147050:five_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTAATAATGTTTT+CGG | - | chr1_4:6915884-6915903 | Msa0147050:intron | 5.0% |
| !!! | TAAGTTTTTTTAAATTTTTA+TGG | - | chr1_4:6917309-6917328 | Msa0147050:intron | 5.0% |
| !!! | AAGTTTTTTTAAATTTTTAT+GGG | - | chr1_4:6917310-6917329 | Msa0147050:intron | 5.0% |
| ! | TTAGTTGGTGCACCTGGAAG+CGG | - | chr1_4:6913018-6913037 | Msa0147050:three_prime_UTR | 50.0% |
| TTAGTCTGCACGAGGGCTTT+AGG | - | chr1_4:6913635-6913654 | Msa0147050:intron | 50.0% | |
| ACACCCCTTGATTCACCTCA+GGG | + | chr1_4:6913779-6913798 | None:intergenic | 50.0% | |
| TAGTCTGCTTGAGGGCTTCT+AGG | - | chr1_4:6913898-6913917 | Msa0147050:intron | 50.0% | |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | + | chr1_4:6913960-6913979 | None:intergenic | 50.0% |
| CCACTTAGTGGGAAAAGGCT+TGG | - | chr1_4:6913957-6913976 | Msa0147050:intron | 50.0% | |
| CTACCTGCTTTGATTGCAGG+AGG | - | chr1_4:6914121-6914140 | Msa0147050:intron | 50.0% | |
| !! | GCTGCTAGAGCATTGAAGGA+TGG | - | chr1_4:6914246-6914265 | Msa0147050:intron | 50.0% |
| CCATGTGAAAGGTTCTCCAG+TGG | + | chr1_4:6914582-6914601 | None:intergenic | 50.0% | |
| CCACTGGAGAACCTTTCACA+TGG | - | chr1_4:6914579-6914598 | Msa0147050:intron | 50.0% | |
| CTGGGAAGTAGAGTCTCCAA+TGG | + | chr1_4:6914706-6914725 | None:intergenic | 50.0% | |
| GACTCTACTTCCCAGACTTC+TGG | - | chr1_4:6914711-6914730 | Msa0147050:CDS | 50.0% | |
| !! | GACGTTCTTTTCTGCCGCTT+TGG | + | chr1_4:6915045-6915064 | None:intergenic | 50.0% |
| GCGAGTGATGTCTCCAACAT+GGG | + | chr1_4:6915087-6915106 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr1_4:6915305-6915324 | Msa0147050:intron | 50.0% |
| CTTTGTCTGCGAGTTTGGAG+GGG | + | chr1_4:6915656-6915675 | None:intergenic | 50.0% | |
| GCTTTGTCTGCGAGTTTGGA+GGG | + | chr1_4:6915657-6915676 | None:intergenic | 50.0% | |
| TATCAGACAGCTAGCGATCG+AGG | + | chr1_4:6915690-6915709 | None:intergenic | 50.0% | |
| ATTTGCAGGCGACTGAAACC+TGG | - | chr1_4:6915957-6915976 | Msa0147050:intron | 50.0% | |
| TTGGTTGCAGACTCCAGTTC+AGG | + | chr1_4:6916023-6916042 | None:intergenic | 50.0% | |
| GATATGGGTCACACCTTCTC+TGG | + | chr1_4:6916117-6916136 | None:intergenic | 50.0% | |
| ! | AACCGATGGGAGCACAAAGA+AGG | - | chr1_4:6916487-6916506 | Msa0147050:CDS | 50.0% |
| TGCCTTCTTTGTGCTCCCAT+CGG | + | chr1_4:6916492-6916511 | None:intergenic | 50.0% | |
| ! | ATGGGAGCACAAAGAAGGCA+TGG | - | chr1_4:6916492-6916511 | Msa0147050:CDS | 50.0% |
| ! | TGGGAGCACAAAGAAGGCAT+GGG | - | chr1_4:6916493-6916512 | Msa0147050:CDS | 50.0% |
| ! | CAAAGAAGGCATGGGGATCA+TGG | - | chr1_4:6916501-6916520 | Msa0147050:CDS | 50.0% |
| GCTGCGGCCAAATTGAATTG+AGG | - | chr1_4:6916978-6916997 | Msa0147050:CDS | 50.0% | |
| TAGGTCCGACCCCATTTAGT+GGG | - | chr1_4:6917341-6917360 | Msa0147050:intron | 50.0% | |
| CGACCCCATTTAGTGGGATA+AGG | - | chr1_4:6917347-6917366 | Msa0147050:intron | 50.0% | |
| TGGACATGTCTACGTTCTGC+AGG | - | chr1_4:6917640-6917659 | Msa0147050:intron | 50.0% | |
| !!! | CCGTTTTCGAGTAGGTAAGC+AGG | + | chr1_4:6917935-6917954 | None:intergenic | 50.0% |
| GTATGACCCCAAAGCGAAGT+TGG | + | chr1_4:6918100-6918119 | None:intergenic | 50.0% | |
| !! | CATCGACTCGGCATATGTAC+TGG | - | chr1_4:6918336-6918355 | Msa0147050:intron | 50.0% |
| TAGTCGAACCACTGAGTCAC+TGG | - | chr1_4:6918372-6918391 | Msa0147050:intron | 50.0% | |
| ! | TAGTTGGTGCACCTGGAAGC+GGG | - | chr1_4:6913019-6913038 | Msa0147050:three_prime_UTR | 55.0% |
| ! | AAGGTGGATTTCCCGCTTCC+AGG | + | chr1_4:6913033-6913052 | None:intergenic | 55.0% |
| AACCTGACAAACGCGAACCC+AGG | + | chr1_4:6913088-6913107 | None:intergenic | 55.0% | |
| CACACCCCTTGATTCACCTC+AGG | + | chr1_4:6913780-6913799 | None:intergenic | 55.0% | |
| CCACCTCCTGCAATCAAAGC+AGG | + | chr1_4:6914127-6914146 | None:intergenic | 55.0% | |
| CCTGCTTTGATTGCAGGAGG+TGG | - | chr1_4:6914124-6914143 | Msa0147050:intron | 55.0% | |
| GACCGAAGCAGCCATGTGAA+AGG | + | chr1_4:6914593-6914612 | None:intergenic | 55.0% | |
| GGCGAGTGATGTCTCCAACA+TGG | + | chr1_4:6915088-6915107 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr1_4:6915310-6915329 | Msa0147050:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr1_4:6915311-6915330 | Msa0147050:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr1_4:6915312-6915331 | Msa0147050:intron | 55.0% | |
| TTTGGGAGAGGAGGCCTTTG+GGG | + | chr1_4:6915588-6915607 | None:intergenic | 55.0% | |
| ! | CTTTGGGAGAGGAGGCCTTT+GGG | + | chr1_4:6915589-6915608 | None:intergenic | 55.0% |
| ! | ACTTTGGGAGAGGAGGCCTT+TGG | + | chr1_4:6915590-6915609 | None:intergenic | 55.0% |
| ! | GGCTTTGTCTGCGAGTTTGG+AGG | + | chr1_4:6915658-6915677 | None:intergenic | 55.0% |
| AGACTCCAGTTCAGGACCTG+CGG | + | chr1_4:6916015-6916034 | None:intergenic | 55.0% | |
| GGGACAACAACAGCATTCCC+AGG | + | chr1_4:6916068-6916087 | None:intergenic | 55.0% | |
| AAGAGGCTGCAAGGTTCTCC+AGG | - | chr1_4:6916199-6916218 | Msa0147050:CDS | 55.0% | |
| ! | GGGAGCACAAAGAAGGCATG+GGG | - | chr1_4:6916494-6916513 | Msa0147050:CDS | 55.0% |
| !!! | GTTTTGGTGTTGGCACGGAG+TGG | - | chr1_4:6916722-6916741 | Msa0147050:CDS | 55.0% |
| CTAGGTCCGACCCCATTTAG+TGG | - | chr1_4:6917340-6917359 | Msa0147050:intron | 55.0% | |
| !!! | CCAAACGCCCGTTTTCGAGT+AGG | + | chr1_4:6917943-6917962 | None:intergenic | 55.0% |
| CCTACTCGAAAACGGGCGTT+TGG | - | chr1_4:6917940-6917959 | Msa0147050:intron | 55.0% | |
| CTCGAAAACGGGCGTTTGGT+TGG | - | chr1_4:6917944-6917963 | Msa0147050:intron | 55.0% | |
| GGGGTCATACCACAGTCCTT+AGG | - | chr1_4:6918110-6918129 | Msa0147050:intron | 55.0% | |
| CGGCATATGTACTGGGTCAC+TGG | - | chr1_4:6918344-6918363 | Msa0147050:intron | 55.0% | |
| CGGTTCAACCAGTGACTCAG+TGG | + | chr1_4:6918383-6918402 | None:intergenic | 55.0% | |
| TGCGTTCCTCTTCTCGCACC+TGG | - | chr1_4:6913067-6913086 | Msa0147050:three_prime_UTR | 60.0% | |
| GCGTTCCTCTTCTCGCACCT+GGG | - | chr1_4:6913068-6913087 | Msa0147050:three_prime_UTR | 60.0% | |
| CACCTGGGTTCGCGTTTGTC+AGG | - | chr1_4:6913083-6913102 | Msa0147050:three_prime_UTR | 60.0% | |
| !!! | AGGGGAGGGTTTTGGGTGGT+AGG | - | chr1_4:6915330-6915349 | Msa0147050:intron | 60.0% |
| TTGGGAGAGGAGGCCTTTGG+GGG | + | chr1_4:6915587-6915606 | None:intergenic | 60.0% | |
| GTCTGCGAGTTTGGAGGGGA+GGG | + | chr1_4:6915652-6915671 | None:intergenic | 60.0% | |
| TGTCTGCGAGTTTGGAGGGG+AGG | + | chr1_4:6915653-6915672 | None:intergenic | 60.0% | |
| TGCAGGCGACTGAAACCTGG+CGG | - | chr1_4:6915960-6915979 | Msa0147050:intron | 60.0% | |
| TGATGCCGCAGGTCCTGAAC+TGG | - | chr1_4:6916007-6916026 | Msa0147050:intron | 60.0% | |
| !! | TTGGTGTTGGCACGGAGTGG+AGG | - | chr1_4:6916725-6916744 | Msa0147050:CDS | 60.0% |
| !! | ACTCGGCTCGGACATCGACT+CGG | - | chr1_4:6918324-6918343 | Msa0147050:intron | 60.0% |
| GCGAACCCAGGTGCGAGAAG+AGG | + | chr1_4:6913076-6913095 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | chr1_4:6915316-6915335 | Msa0147050:intron | 65.0% | |
| ! | TGGAGGGGAGGGGAGGGTTT+TGG | - | chr1_4:6915322-6915341 | Msa0147050:intron | 65.0% |
| ! | GGAGGGGAGGGGAGGGTTTT+GGG | - | chr1_4:6915323-6915342 | Msa0147050:intron | 65.0% |
| TGGGAGAGGAGGCCTTTGGG+GGG | + | chr1_4:6915586-6915605 | None:intergenic | 65.0% | |
| AGGCGACTGAAACCTGGCGG+TGG | - | chr1_4:6915963-6915982 | Msa0147050:intron | 65.0% | |
| CGACTGAAACCTGGCGGTGG+AGG | - | chr1_4:6915966-6915985 | Msa0147050:intron | 65.0% | |
| ! | GCATTGACACCTCCACCGCC+AGG | + | chr1_4:6915978-6915997 | None:intergenic | 65.0% |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | chr1_4:6915315-6915334 | Msa0147050:intron | 70.0% | |
| !!! | GGGGAGGGGAGGGTTTTGGG+TGG | - | chr1_4:6915326-6915345 | Msa0147050:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 6912755 | 6918512 | 6912755 | ID=Msa0147050;Name=Msa0147050 |
| chr1_4 | mRNA | 6912755 | 6918512 | 6912755 | ID=Msa0147050-mRNA-1;Parent=Msa0147050;Name=Msa0147050-mRNA-1;_AED=0.03;_eAED=0.03;_QI=98|1|1|1|1|1|6|530|751 |
| chr1_4 | exon | 6912755 | 6913605 | 6912755 | ID=Msa0147050-mRNA-1:exon:3024;Parent=Msa0147050-mRNA-1 |
| chr1_4 | exon | 6914387 | 6914557 | 6914387 | ID=Msa0147050-mRNA-1:exon:3023;Parent=Msa0147050-mRNA-1 |
| chr1_4 | exon | 6914642 | 6915302 | 6914642 | ID=Msa0147050-mRNA-1:exon:3022;Parent=Msa0147050-mRNA-1 |
| chr1_4 | exon | 6916108 | 6917072 | 6916108 | ID=Msa0147050-mRNA-1:exon:3021;Parent=Msa0147050-mRNA-1 |
| chr1_4 | exon | 6918163 | 6918272 | 6918163 | ID=Msa0147050-mRNA-1:exon:3020;Parent=Msa0147050-mRNA-1 |
| chr1_4 | exon | 6918387 | 6918512 | 6918387 | ID=Msa0147050-mRNA-1:exon:3019;Parent=Msa0147050-mRNA-1 |
| chr1_4 | five_prime_UTR | 6918415 | 6918512 | 6918415 | ID=Msa0147050-mRNA-1:five_prime_utr;Parent=Msa0147050-mRNA-1 |
| chr1_4 | CDS | 6918387 | 6918414 | 6918387 | ID=Msa0147050-mRNA-1:cds;Parent=Msa0147050-mRNA-1 |
| chr1_4 | CDS | 6918163 | 6918272 | 6918163 | ID=Msa0147050-mRNA-1:cds;Parent=Msa0147050-mRNA-1 |
| chr1_4 | CDS | 6916108 | 6917072 | 6916108 | ID=Msa0147050-mRNA-1:cds;Parent=Msa0147050-mRNA-1 |
| chr1_4 | CDS | 6914642 | 6915302 | 6914642 | ID=Msa0147050-mRNA-1:cds;Parent=Msa0147050-mRNA-1 |
| chr1_4 | CDS | 6914387 | 6914557 | 6914387 | ID=Msa0147050-mRNA-1:cds;Parent=Msa0147050-mRNA-1 |
| chr1_4 | CDS | 6913285 | 6913605 | 6913285 | ID=Msa0147050-mRNA-1:cds;Parent=Msa0147050-mRNA-1 |
| chr1_4 | three_prime_UTR | 6912755 | 6913284 | 6912755 | ID=Msa0147050-mRNA-1:three_prime_utr;Parent=Msa0147050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
