Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303380 | RHN76282.1 | 65.116 | 86 | 7 | 1 | 1 | 86 | 1 | 63 | 1.90e-19 | 85.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303380 | A0A396JG60 | 65.116 | 86 | 7 | 1 | 1 | 86 | 1 | 63 | 9.08e-20 | 85.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0303380 | 0.800001 | 1.768657e-48 | -8.615850e-47 |
| Msa0012040 | Msa0303380 | 0.802274 | 6.065143e-49 | -8.615850e-47 |
| Msa0013050 | Msa0303380 | -0.803262 | 3.791715e-49 | -8.615850e-47 |
| Msa0017510 | Msa0303380 | 0.811418 | 7.072575e-51 | -8.615850e-47 |
| Msa0032580 | Msa0303380 | 0.806789 | 6.934534e-50 | -8.615850e-47 |
| Msa0039330 | Msa0303380 | 0.809583 | 1.760923e-50 | -8.615850e-47 |
| Msa0054480 | Msa0303380 | 0.809334 | 1.991790e-50 | -8.615850e-47 |
| Msa0078900 | Msa0303380 | 0.801366 | 9.315850e-49 | -8.615850e-47 |
| Msa0081930 | Msa0303380 | 0.808079 | 3.692902e-50 | -8.615850e-47 |
| Msa0089820 | Msa0303380 | 0.801383 | 9.239904e-49 | -8.615850e-47 |
| Msa0101700 | Msa0303380 | 0.805047 | 1.611877e-49 | -8.615850e-47 |
| Msa0101710 | Msa0303380 | 0.824268 | 8.851306e-54 | -8.615850e-47 |
| Msa0115270 | Msa0303380 | 0.827484 | 1.525124e-54 | -8.615850e-47 |
| Msa0136070 | Msa0303380 | 0.809587 | 1.758156e-50 | -8.615850e-47 |
| Msa0141930 | Msa0303380 | 0.809793 | 1.587143e-50 | -8.615850e-47 |
| Msa0150820 | Msa0303380 | 0.813429 | 2.570915e-51 | -8.615850e-47 |
| Msa0157290 | Msa0303380 | 0.811502 | 6.778857e-51 | -8.615850e-47 |
| Msa0160550 | Msa0303380 | 0.818972 | 1.483177e-52 | -8.615850e-47 |
| Msa0165220 | Msa0303380 | 0.818787 | 1.633514e-52 | -8.615850e-47 |
| Msa0171540 | Msa0303380 | 0.809191 | 2.137677e-50 | -8.615850e-47 |
| Msa0173990 | Msa0303380 | 0.818617 | 1.785478e-52 | -8.615850e-47 |
| Msa0180500 | Msa0303380 | 0.802875 | 4.557336e-49 | -8.615850e-47 |
| Msa0187070 | Msa0303380 | 0.807663 | 4.527853e-50 | -8.615850e-47 |
| Msa0187120 | Msa0303380 | 0.805259 | 1.455288e-49 | -8.615850e-47 |
| Msa0197660 | Msa0303380 | 0.814348 | 1.612977e-51 | -8.615850e-47 |
| Msa0212990 | Msa0303380 | 0.806074 | 9.816127e-50 | -8.615850e-47 |
| Msa0215660 | Msa0303380 | 0.807788 | 4.259724e-50 | -8.615850e-47 |
| Msa0222890 | Msa0303380 | 0.801466 | 8.884991e-49 | -8.615850e-47 |
| Msa0239800 | Msa0303380 | 0.812902 | 3.356084e-51 | -8.615850e-47 |
| Msa0262310 | Msa0303380 | 0.802503 | 5.439466e-49 | -8.615850e-47 |
| Msa0262340 | Msa0303380 | 0.820145 | 8.006377e-53 | -8.615850e-47 |
| Msa0265520 | Msa0303380 | 0.886158 | 4.362532e-72 | -8.615850e-47 |
| Msa0271530 | Msa0303380 | 0.819302 | 1.247155e-52 | -8.615850e-47 |
| Msa0277820 | Msa0303380 | 0.811104 | 8.270238e-51 | -8.615850e-47 |
| Msa0279220 | Msa0303380 | 0.824834 | 6.512624e-54 | -8.615850e-47 |
| Msa0279790 | Msa0303380 | 0.801656 | 8.124775e-49 | -8.615850e-47 |
| Msa0288100 | Msa0303380 | 0.803470 | 3.433143e-49 | -8.615850e-47 |
| Msa0289250 | Msa0303380 | 0.827694 | 1.358013e-54 | -8.615850e-47 |
| Msa0303380 | Msa0306210 | -0.803493 | 3.395144e-49 | -8.615850e-47 |
| Msa0303380 | Msa0317510 | 0.815908 | 7.263284e-52 | -8.615850e-47 |
| Msa0303380 | Msa0323080 | 0.804326 | 2.279471e-49 | -8.615850e-47 |
| Msa0303380 | Msa0326520 | 0.801963 | 7.026409e-49 | -8.615850e-47 |
| Msa0303380 | Msa0336420 | 0.814571 | 1.439469e-51 | -8.615850e-47 |
| Msa0303380 | Msa0337620 | 0.815797 | 7.691912e-52 | -8.615850e-47 |
| Msa0303380 | Msa0344830 | 0.803005 | 4.284321e-49 | -8.615850e-47 |
| Msa0303380 | Msa0350990 | 0.818456 | 1.942033e-52 | -8.615850e-47 |
| Msa0303380 | Msa0351030 | 0.822107 | 2.826638e-53 | -8.615850e-47 |
| Msa0303380 | Msa0351080 | 0.817062 | 4.006130e-52 | -8.615850e-47 |
| Msa0303380 | Msa0351100 | 0.821989 | 3.010834e-53 | -8.615850e-47 |
| Msa0303380 | Msa0363680 | 0.804796 | 1.818814e-49 | -8.615850e-47 |
| Msa0303380 | Msa0372340 | 0.804231 | 2.386039e-49 | -8.615850e-47 |
| Msa0303380 | Msa0379640 | 0.803599 | 3.227560e-49 | -8.615850e-47 |
| Msa0303380 | Msa0383500 | 0.803072 | 4.149530e-49 | -8.615850e-47 |
| Msa0303380 | Msa0390400 | -0.805000 | 1.648565e-49 | -8.615850e-47 |
| Msa0303380 | Msa0406880 | 0.820405 | 6.978224e-53 | -8.615850e-47 |
| Msa0303380 | Msa0432770 | 0.823603 | 1.267046e-53 | -8.615850e-47 |
| Msa0303380 | Msa0442200 | 0.814907 | 1.212679e-51 | -8.615850e-47 |
| Msa0303380 | Msa0442850 | 0.804503 | 2.093812e-49 | -8.615850e-47 |
| Msa0303380 | Msa0466390 | 0.804612 | 1.986876e-49 | -8.615850e-47 |
| Msa0303380 | Msa0467060 | 0.806742 | 7.094867e-50 | -8.615850e-47 |
| Msa0303380 | Msa0467900 | -0.803248 | 3.815743e-49 | -8.615850e-47 |
| Msa0303380 | Msa0480000 | 0.825438 | 4.687975e-54 | -8.615850e-47 |
| Msa0303380 | Msa0484780 | 0.822120 | 2.808097e-53 | -8.615850e-47 |
| Msa0303380 | Msa0509390 | 0.807630 | 4.602754e-50 | -8.615850e-47 |
| Msa0303380 | Msa0512750 | 0.803295 | 3.732073e-49 | -8.615850e-47 |
| Msa0303380 | Msa0529890 | 0.814153 | 1.781291e-51 | -8.615850e-47 |
| Msa0303380 | Msa0553220 | -0.801793 | 7.613092e-49 | -8.615850e-47 |
| Msa0303380 | Msa0558690 | 0.812894 | 3.370016e-51 | -8.615850e-47 |
| Msa0303380 | Msa0562440 | 0.829220 | 5.813638e-55 | -8.615850e-47 |
| Msa0303380 | Msa0577500 | 0.809066 | 2.273050e-50 | -8.615850e-47 |
| Msa0303380 | Msa0585560 | 0.803339 | 3.655054e-49 | -8.615850e-47 |
| Msa0303380 | Msa0592440 | 0.802546 | 5.330739e-49 | -8.615850e-47 |
| Msa0303380 | Msa0593650 | 0.813543 | 2.427433e-51 | -8.615850e-47 |
| Msa0303380 | Msa0610430 | 0.816652 | 4.951702e-52 | -8.615850e-47 |
| Msa0303380 | Msa0617640 | 0.804451 | 2.146543e-49 | -8.615850e-47 |
| Msa0303380 | Msa0620960 | 0.809993 | 1.437743e-50 | -8.615850e-47 |
| Msa0303380 | Msa0621490 | 0.823248 | 1.533874e-53 | -8.615850e-47 |
| Msa0303380 | Msa0621590 | 0.810853 | 9.375256e-51 | -8.615850e-47 |
| Msa0303380 | Msa0623080 | 0.820943 | 5.250157e-53 | -8.615850e-47 |
| Msa0303380 | Msa0625720 | 0.814882 | 1.228410e-51 | -8.615850e-47 |
| Msa0303380 | Msa0641670 | 0.807294 | 5.423872e-50 | -8.615850e-47 |
| Msa0303380 | Msa0654010 | 0.810737 | 9.934716e-51 | -8.615850e-47 |
| Msa0303380 | Msa0661190 | -0.810270 | 1.253028e-50 | -8.615850e-47 |
| Msa0303380 | Msa0663390 | 0.802872 | 4.565432e-49 | -8.615850e-47 |
| Msa0303380 | Msa0673460 | 0.814533 | 1.467816e-51 | -8.615850e-47 |
| Msa0303380 | Msa0692230 | 0.801821 | 7.513266e-49 | -8.615850e-47 |
| Msa0303380 | Msa0692830 | 0.803665 | 3.127907e-49 | -8.615850e-47 |
| Msa0303380 | Msa0692950 | 0.809398 | 1.929649e-50 | -8.615850e-47 |
| Msa0303380 | Msa0701920 | 0.817003 | 4.130411e-52 | -8.615850e-47 |
| Msa0303380 | Msa0715700 | 0.817475 | 3.235256e-52 | -8.615850e-47 |
| Msa0303380 | Msa0716840 | 0.833006 | 6.830425e-56 | -8.615850e-47 |
| Msa0303380 | Msa0724210 | 0.805751 | 1.147662e-49 | -8.615850e-47 |
| Msa0303380 | Msa0743720 | 0.852320 | 4.988012e-61 | -8.615850e-47 |
| Msa0303380 | Msa0745790 | 0.839364 | 1.656172e-57 | -8.615850e-47 |
| Msa0303380 | Msa0773840 | 0.803940 | 2.742795e-49 | -8.615850e-47 |
| Msa0303380 | Msa0793800 | 0.819847 | 9.369438e-53 | -8.615850e-47 |
| Msa0303380 | Msa0795090 | 0.817741 | 2.817890e-52 | -8.615850e-47 |
| Msa0303380 | Msa0812570 | 0.803051 | 4.191914e-49 | -8.615850e-47 |
| Msa0303380 | Msa0816700 | 0.803108 | 4.078932e-49 | -8.615850e-47 |
| Msa0303380 | Msa0824680 | 0.814362 | 1.601184e-51 | -8.615850e-47 |
| Msa0303380 | Msa0827040 | 0.813731 | 2.207003e-51 | -8.615850e-47 |
| Msa0303380 | Msa0840820 | 0.802504 | 5.437385e-49 | -8.615850e-47 |
| Msa0303380 | Msa0863870 | 0.810516 | 1.108655e-50 | -8.615850e-47 |
| Msa0303380 | Msa0871270 | 0.805926 | 1.054572e-49 | -8.615850e-47 |
| Msa0303380 | Msa0880140 | 0.811544 | 6.640214e-51 | -8.615850e-47 |
| Msa0303380 | Msa0884470 | 0.810327 | 1.217779e-50 | -8.615850e-47 |
| Msa0303380 | Msa0925290 | 0.801713 | 7.906962e-49 | -8.615850e-47 |
| Msa0303380 | Msa0938220 | 0.809976 | 1.449994e-50 | -8.615850e-47 |
| Msa0303380 | Msa0947660 | 0.816335 | 5.832327e-52 | -8.615850e-47 |
| Msa0303380 | Msa0959360 | 0.821949 | 3.076348e-53 | -8.615850e-47 |
| Msa0303380 | Msa0968680 | 0.808378 | 3.189107e-50 | -8.615850e-47 |
| Msa0303380 | Msa0969810 | 0.808929 | 2.432096e-50 | -8.615850e-47 |
| Msa0303380 | Msa0996170 | 0.829486 | 5.010245e-55 | -8.615850e-47 |
| Msa0303380 | Msa0999970 | 0.804245 | 2.369862e-49 | -8.615850e-47 |
| Msa0303380 | Msa1003620 | 0.807925 | 3.983817e-50 | -8.615850e-47 |
| Msa0303380 | Msa1012830 | 0.803805 | 2.925693e-49 | -8.615850e-47 |
| Msa0303380 | Msa1014540 | 0.839052 | 1.995072e-57 | -8.615850e-47 |
| Msa0303380 | Msa1021540 | 0.809017 | 2.328716e-50 | -8.615850e-47 |
| Msa0303380 | Msa1030970 | 0.805745 | 1.150789e-49 | -8.615850e-47 |
| Msa0303380 | Msa1046460 | 0.806094 | 9.720927e-50 | -8.615850e-47 |
| Msa0303380 | Msa1075220 | -0.812586 | 3.935505e-51 | -8.615850e-47 |
| Msa0303380 | Msa1082500 | 0.830935 | 2.218675e-55 | -8.615850e-47 |
| Msa0303380 | Msa1087710 | 0.804184 | 2.439809e-49 | -8.615850e-47 |
| Msa0303380 | Msa1089020 | 0.866429 | 2.869508e-65 | -8.615850e-47 |
| Msa0303380 | Msa1090260 | 0.806583 | 7.667174e-50 | -8.615850e-47 |
| Msa0303380 | Msa1104090 | 0.809900 | 1.505498e-50 | -8.615850e-47 |
| Msa0303380 | Msa1104370 | 0.815784 | 7.740934e-52 | -8.615850e-47 |
| Msa0303380 | Msa1116130 | -0.820091 | 8.238764e-53 | -8.615850e-47 |
| Msa0303380 | Msa1137570 | 0.811713 | 6.102017e-51 | -8.615850e-47 |
| Msa0303380 | Msa1162550 | -0.805121 | 1.555582e-49 | -8.615850e-47 |
| Msa0303380 | Msa1171870 | 0.808125 | 3.612164e-50 | -8.615850e-47 |
| Msa0303380 | Msa1174040 | 0.829022 | 6.495563e-55 | -8.615850e-47 |
| Msa0303380 | Msa1186950 | -0.820683 | 6.027051e-53 | -8.615850e-47 |
| Msa0303380 | Msa1199220 | 0.821618 | 3.668533e-53 | -8.615850e-47 |
| Msa0303380 | Msa1203250 | 0.820154 | 7.966268e-53 | -8.615850e-47 |
| Msa0303380 | Msa1208880 | 0.803211 | 3.885216e-49 | -8.615850e-47 |
| Msa0303380 | Msa1233500 | 0.805450 | 1.327200e-49 | -8.615850e-47 |
| Msa0303380 | Msa1233890 | 0.825703 | 4.056112e-54 | -8.615850e-47 |
| Msa0303380 | Msa1244250 | 0.802660 | 5.049270e-49 | -8.615850e-47 |
| Msa0303380 | Msa1249490 | 0.828966 | 6.699775e-55 | -8.615850e-47 |
| Msa0303380 | Msa1253020 | 0.801371 | 9.293141e-49 | -8.615850e-47 |
| Msa0303380 | Msa1271210 | 0.824513 | 7.750952e-54 | -8.615850e-47 |
| Msa0303380 | Msa1275360 | 0.809652 | 1.702256e-50 | -8.615850e-47 |
| Msa0303380 | Msa1277660 | 0.815875 | 7.387526e-52 | -8.615850e-47 |
| Msa0303380 | Msa1279210 | 0.812312 | 4.516916e-51 | -8.615850e-47 |
| Msa0303380 | Msa1283860 | 0.807766 | 4.304723e-50 | -8.615850e-47 |
| Msa0303380 | Msa1284260 | 0.802519 | 5.398823e-49 | -8.615850e-47 |
| Msa0303380 | Msa1284680 | 0.809035 | 2.308968e-50 | -8.615850e-47 |
| Msa0303380 | Msa1287460 | 0.815041 | 1.132424e-51 | -8.615850e-47 |
| Msa0303380 | Msa1302640 | 0.800235 | 1.584954e-48 | -8.615850e-47 |
| Msa0303380 | Msa1305340 | 0.805972 | 1.031141e-49 | -8.615850e-47 |
| Msa0303380 | Msa1306430 | 0.803519 | 3.354029e-49 | -8.615850e-47 |
| Msa0303380 | Msa1306840 | 0.808459 | 3.064709e-50 | -8.615850e-47 |
| Msa0303380 | Msa1308380 | 0.813190 | 2.901776e-51 | -8.615850e-47 |
| Msa0303380 | Msa1320620 | 0.800490 | 1.406309e-48 | -8.615850e-47 |
| Msa0303380 | Msa1327050 | 0.807506 | 4.888731e-50 | -8.615850e-47 |
| Msa0303380 | Msa1327680 | 0.805037 | 1.619957e-49 | -8.615850e-47 |
| Msa0303380 | Msa1340470 | 0.811324 | 7.412327e-51 | -8.615850e-47 |
| Msa0303380 | Msa1348490 | 0.821154 | 4.695833e-53 | -8.615850e-47 |
| Msa0303380 | Msa1362880 | 0.816581 | 5.137525e-52 | -8.615850e-47 |
| Msa0303380 | Msa1369530 | 0.802560 | 5.295352e-49 | -8.615850e-47 |
| Msa0303380 | Msa1371430 | 0.828635 | 8.055165e-55 | -8.615850e-47 |
| Msa0303380 | Msa1372760 | 0.801421 | 9.076364e-49 | -8.615850e-47 |
| Msa0303380 | Msa1410100 | 0.821348 | 4.236235e-53 | -8.615850e-47 |
| Msa0303380 | Msa1415640 | 0.815602 | 8.499563e-52 | -8.615850e-47 |
| Msa0303380 | Msa1416150 | 0.818090 | 2.350281e-52 | -8.615850e-47 |
| Msa0303380 | Msa1419960 | 0.801423 | 9.066340e-49 | -8.615850e-47 |
| Msa0303380 | Msa1426000 | 0.806653 | 7.410306e-50 | -8.615850e-47 |
| Msa0303380 | Msa1430680 | 0.801768 | 7.705880e-49 | -8.615850e-47 |
| Msa0303380 | Msa1435370 | 0.807647 | 4.563075e-50 | -8.615850e-47 |
| Msa0303380 | Msa1440910 | 0.809934 | 1.480161e-50 | -8.615850e-47 |
| Msa0303380 | Msa1451620 | -0.812602 | 3.903124e-51 | -8.615850e-47 |
| Msa0303380 | Msa1466540 | 0.810520 | 1.106552e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0303380 | MtrunA17_Chr2g0330351 | 65.116 | 86 | 7 | 1 | 1 | 86 | 1 | 63 | 1.75e-23 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 149 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTATTGAACTTTGGGAATT+TGG | 0.122868 | 2_3:-60591443 | Msa0303380:five_prime_UTR |
| AATTCAGTTGTTTGGGAATT+TGG | 0.146474 | 2_3:-60591194 | Msa0303380:five_prime_UTR |
| TAATATGATGGACTGGTCTT+AGG | 0.173203 | 2_3:-60588173 | Msa0303380:three_prime_UTR |
| GGCTTTCTTTCTTGAGGGTT+TGG | 0.237746 | 2_3:-60590930 | Msa0303380:five_prime_UTR |
| TTGTTAGGACTTAGAATAAA+AGG | 0.266188 | 2_3:-60588288 | Msa0303380:three_prime_UTR |
| TCAAAAGCAATTCAGTTGTT+TGG | 0.281031 | 2_3:-60591202 | Msa0303380:five_prime_UTR |
| GTATTGAACTTTGGGAATTT+GGG | 0.281740 | 2_3:-60591442 | Msa0303380:five_prime_UTR |
| CAAAAGCAATTCAGTTGTTT+GGG | 0.286910 | 2_3:-60591201 | Msa0303380:five_prime_UTR |
| CTACAAGAAGACAAGAAAAT+TGG | 0.287221 | 2_3:-60590570 | Msa0303380:five_prime_UTR |
| CTTATGCGTCTTTCTAAGTT+TGG | 0.288933 | 2_3:-60590512 | Msa0303380:five_prime_UTR |
| GATGTAAATGTTGATATTAT+TGG | 0.293583 | 2_3:-60591469 | Msa0303380:five_prime_UTR |
| ACCTAACAGAGAGGGCTTAC+AGG | 0.302124 | 2_3:-60590280 | Msa0303380:five_prime_UTR |
| CTAGAATATGTATGAATGTT+AGG | 0.304013 | 2_3:+60590749 | None:intergenic |
| CAGCCAGCCTTCAGCTTTGA+AGG | 0.314078 | 2_3:+60588455 | None:intergenic |
| GTATAGCTGTTGAGTTTGTT+AGG | 0.315800 | 2_3:-60588236 | Msa0303380:three_prime_UTR |
| ATTTCAGTTGTTAGACCTAT+AGG | 0.327510 | 2_3:-60588201 | Msa0303380:three_prime_UTR |
| ATCAAGAACAGACCCGTTCT+TGG | 0.335859 | 2_3:-60588573 | Msa0303380:CDS |
| GCTTTCTTTCTTGAGGGTTT+GGG | 0.336829 | 2_3:-60590929 | Msa0303380:five_prime_UTR |
| ATTGGTAAAGTATTGAACTT+TGG | 0.339456 | 2_3:-60591451 | Msa0303380:five_prime_UTR |
| AAGTGCATCGGCCACTTTCC+TGG | 0.348306 | 2_3:+60590703 | None:intergenic |
| TGTTGGTGGTTGGTCTAAGT+TGG | 0.348737 | 2_3:-60591026 | Msa0303380:five_prime_UTR |
| TTGGTAAAGTATTGAACTTT+GGG | 0.351996 | 2_3:-60591450 | Msa0303380:five_prime_UTR |
| CAAGGAGTTGTGCCTCCTAC+TGG | 0.379823 | 2_3:-60590656 | Msa0303380:five_prime_UTR |
| TGAGAAAGTTATGAAGGAAA+TGG | 0.381737 | 2_3:-60590987 | Msa0303380:five_prime_UTR |
| GGGTGTATGAAGTATTATAA+TGG | 0.383102 | 2_3:-60590794 | Msa0303380:five_prime_UTR |
| TTAGAATAAAAGGAGTTTGT+TGG | 0.386247 | 2_3:-60588278 | Msa0303380:three_prime_UTR |
| CACGGATCCAATAGGGTTGC+TGG | 0.387111 | 2_3:-60588516 | Msa0303380:exon |
| GCCTGTAAGCCCTCTCTGTT+AGG | 0.390509 | 2_3:+60590279 | None:intergenic |
| ATTGAAACCGTAACAGATCT+TGG | 0.395436 | 2_3:-60588652 | Msa0303380:CDS |
| AATATGATGGACTGGTCTTA+GGG | 0.395801 | 2_3:-60588172 | Msa0303380:three_prime_UTR |
| GTGGTTGGTCTAAGTTGGGT+AGG | 0.398659 | 2_3:-60591021 | Msa0303380:five_prime_UTR |
| TCATGTCGGTGCTGCAGCTT+CGG | 0.402601 | 2_3:-60591104 | Msa0303380:five_prime_UTR |
| TTTGGGAATTTGGATGATCT+CGG | 0.403976 | 2_3:-60591184 | Msa0303380:five_prime_UTR |
| GTGAAGGGAGAGTGCTCCCT+TGG | 0.412376 | 2_3:-60588096 | Msa0303380:three_prime_UTR |
| TATTGGATCCGTGCCTTTGA+AGG | 0.413281 | 2_3:+60588526 | None:intergenic |
| ATACCACGTAGTTTATCTTC+AGG | 0.413531 | 2_3:+60591553 | None:intergenic |
| CATCATATTAATAATCCTAT+AGG | 0.413541 | 2_3:+60588186 | None:intergenic |
| TCAGAATCCAAATCCGTTGA+TGG | 0.418697 | 2_3:-60591586 | Msa0303380:five_prime_UTR |
| TGGAGGAGGCTTTGCGCAAA+GGG | 0.420469 | 2_3:-60590358 | Msa0303380:five_prime_UTR |
| GCTACTTCCTCGCAACATTA+CGG | 0.425177 | 2_3:-60590112 | Msa0303380:CDS |
| CATGTCAGAAATCTTGCTTA+TGG | 0.429523 | 2_3:+60588699 | None:intergenic |
| TACGATGGCTTTCTTTCTTG+AGG | 0.430319 | 2_3:-60590936 | Msa0303380:five_prime_UTR |
| GTGTCGTTCTTCTTGACTGC+TGG | 0.433510 | 2_3:+60588628 | None:intergenic |
| GTTGGTGGTTGGTCTAAGTT+GGG | 0.435610 | 2_3:-60591025 | Msa0303380:five_prime_UTR |
| ACGATGGCTTTCTTTCTTGA+GGG | 0.438697 | 2_3:-60590935 | Msa0303380:five_prime_UTR |
| TAGTTACCATGTCATTGTTA+AGG | 0.439331 | 2_3:-60591353 | Msa0303380:five_prime_UTR |
| CAAGTTGTCCTATGTTGTAA+AGG | 0.442451 | 2_3:+60590399 | None:intergenic |
| TTCAAAGGCACGGATCCAAT+AGG | 0.446448 | 2_3:-60588524 | Msa0303380:exon |
| TGAAGGGAGAGTGCTCCCTT+GGG | 0.459913 | 2_3:-60588095 | Msa0303380:three_prime_UTR |
| CATGTCATTGTTAAGGCACT+AGG | 0.463730 | 2_3:-60591346 | Msa0303380:five_prime_UTR |
| CTTTCTAAGTTTGGTAAATG+TGG | 0.463945 | 2_3:-60590503 | Msa0303380:five_prime_UTR |
| CTTGAGGGTTTGGGTAGAGC+AGG | 0.464422 | 2_3:-60590920 | Msa0303380:five_prime_UTR |
| TGCTGGTCCAAGATCTGTTA+CGG | 0.465574 | 2_3:+60588645 | None:intergenic |
| GTGAGAGCCAGCAACCCTAT+TGG | 0.471151 | 2_3:+60588509 | None:intergenic |
| TTGCATGGTATCCATCTTGT+TGG | 0.471260 | 2_3:+60588726 | None:intergenic |
| AGAAGTTATTGGCGCGATAA+CGG | 0.471453 | 2_3:-60590215 | Msa0303380:five_prime_UTR |
| TTGTTGGAATTAGAGTTAAG+AGG | 0.474337 | 2_3:-60588262 | Msa0303380:three_prime_UTR |
| GGTGTATGAAGTATTATAAT+GGG | 0.480051 | 2_3:-60590793 | Msa0303380:five_prime_UTR |
| CTTGCTTATGGAAGCTTGCA+TGG | 0.483544 | 2_3:+60588711 | None:intergenic |
| CCAGATATGTGAAAATCAAA+TGG | 0.484805 | 2_3:+60590141 | None:intergenic |
| TCAAAGGCACGGATCCAATA+GGG | 0.491538 | 2_3:-60588523 | Msa0303380:exon |
| GACACATATAATGTTGTTGT+TGG | 0.491842 | 2_3:-60591043 | Msa0303380:five_prime_UTR |
| TGAGATTGAGAAAGTTATGA+AGG | 0.500325 | 2_3:-60590993 | Msa0303380:five_prime_UTR |
| TGATGTTTGATGAGATGTTA+AGG | 0.501851 | 2_3:-60590679 | Msa0303380:five_prime_UTR |
| TTAGATGAGATGAGATTGAA+TGG | 0.502582 | 2_3:-60591289 | Msa0303380:five_prime_UTR |
| TGCTGTTCTTGTCATGGAGG+AGG | 0.503656 | 2_3:-60590372 | Msa0303380:five_prime_UTR |
| TACCACGTAGTTTATCTTCA+GGG | 0.505363 | 2_3:+60591554 | None:intergenic |
| ATTGGAGTGTAAGATATCAA+TGG | 0.505389 | 2_3:-60590552 | Msa0303380:five_prime_UTR |
| TTAAACAACCAATGGTGCCT+AGG | 0.506080 | 2_3:-60591384 | Msa0303380:five_prime_UTR |
| AAGCTGAAGGCTGGCTGACG+CGG | 0.506384 | 2_3:-60588449 | Msa0303380:three_prime_UTR |
| GTGGAACATTGTTGAGTGTA+TGG | 0.508367 | 2_3:-60590484 | Msa0303380:five_prime_UTR |
| CCAACATCCCTAGGCACCAT+TGG | 0.510794 | 2_3:+60591376 | None:intergenic |
| TGGTTGGTCTAAGTTGGGTA+GGG | 0.510976 | 2_3:-60591020 | Msa0303380:five_prime_UTR |
| CTATAGGATTATTAATATGA+TGG | 0.511207 | 2_3:-60588185 | Msa0303380:three_prime_UTR |
| GTTATTGGCGCGATAACGGT+TGG | 0.512953 | 2_3:-60590211 | Msa0303380:five_prime_UTR |
| TTCTCATGATTTCAATACGA+TGG | 0.514643 | 2_3:-60590951 | Msa0303380:five_prime_UTR |
| ATCAAACAGTTATGCAGCTA+TGG | 0.515720 | 2_3:-60590617 | Msa0303380:five_prime_UTR |
| TGAAAATGCTGTTCTTGTCA+TGG | 0.518590 | 2_3:-60590378 | Msa0303380:five_prime_UTR |
| CAGAATCCAAATCCGTTGAT+GGG | 0.520509 | 2_3:-60591585 | Msa0303380:five_prime_UTR |
| TTTACTGTATACAAGCCTGC+TGG | 0.521200 | 2_3:+60590328 | None:intergenic |
| ACATATAATGTTGTTGTTGG+TGG | 0.521286 | 2_3:-60591040 | Msa0303380:five_prime_UTR |
| TAGATCATCATAGCTGCATA+TGG | 0.521595 | 2_3:+60590590 | None:intergenic |
| TCAAAACAATCTTGTCCTCA+AGG | 0.523083 | 2_3:+60588322 | None:intergenic |
| TTGGGAATTTGGATGATCTC+GGG | 0.529597 | 2_3:-60591183 | Msa0303380:five_prime_UTR |
| CTTTGTCAACGTTGTCATGT+CGG | 0.530379 | 2_3:-60591118 | Msa0303380:five_prime_UTR |
| ATGAAGGAAATGGAAGTTGA+GGG | 0.533124 | 2_3:-60590977 | Msa0303380:five_prime_UTR |
| TAGAATGAATGAGGCTGTTG+AGG | 0.536115 | 2_3:-60590897 | Msa0303380:five_prime_UTR |
| ATTTACATCAATACACACAT+TGG | 0.538909 | 2_3:+60591483 | None:intergenic |
| GCAAAGGGTTCTGTCCCAGC+AGG | 0.539699 | 2_3:-60590343 | Msa0303380:five_prime_UTR |
| CCAATGGTGCCTAGGGATGT+TGG | 0.543498 | 2_3:-60591376 | Msa0303380:five_prime_UTR |
| ATGACAGGATTCCAACAAGA+TGG | 0.546276 | 2_3:-60588737 | Msa0303380:intron |
| GGATTCTGATTGTGATTCTG+AGG | 0.547566 | 2_3:+60591600 | None:intergenic |
| ATGGAGGAGGCTTTGCGCAA+AGG | 0.548012 | 2_3:-60590359 | Msa0303380:five_prime_UTR |
| ATAATGTTGTTGTTGGTGGT+TGG | 0.548071 | 2_3:-60591036 | Msa0303380:five_prime_UTR |
| TTACTGTATACAAGCCTGCT+GGG | 0.548303 | 2_3:+60590329 | None:intergenic |
| AAGGAGTTGTGCCTCCTACT+GGG | 0.549624 | 2_3:-60590655 | Msa0303380:five_prime_UTR |
| GAACCTTCAAAGCTGAAGGC+TGG | 0.549697 | 2_3:-60588458 | Msa0303380:three_prime_UTR |
| TTGTTAAGGCACTAGGAAGA+AGG | 0.550536 | 2_3:-60591339 | Msa0303380:five_prime_UTR |
| GGATCCGTGCCTTTGAAGGT+AGG | 0.550575 | 2_3:+60588530 | None:intergenic |
| GGATTATTAATATGATGGAC+TGG | 0.557080 | 2_3:-60588180 | Msa0303380:three_prime_UTR |
| GCTGCATAACTGTTTGATGA+AGG | 0.559887 | 2_3:+60590622 | None:intergenic |
| CTTGGGGTAACTTGAATGCA+AGG | 0.565587 | 2_3:-60588078 | Msa0303380:three_prime_UTR |
| TTGGGCACTTAAACAACCAA+TGG | 0.565969 | 2_3:-60591392 | Msa0303380:five_prime_UTR |
| TAAACAACCAATGGTGCCTA+GGG | 0.567048 | 2_3:-60591383 | Msa0303380:five_prime_UTR |
| AACATTGTTGAGTGTATGGC+AGG | 0.569514 | 2_3:-60590480 | Msa0303380:five_prime_UTR |
| GAATTTGGGTGGTGAAGCAA+TGG | 0.570595 | 2_3:-60591428 | Msa0303380:five_prime_UTR |
| AACACTGTAAGAATTAGAGC+AGG | 0.574917 | 2_3:-60588419 | Msa0303380:three_prime_UTR |
| TACACCTACCTTCAAAGGCA+CGG | 0.576905 | 2_3:-60588534 | Msa0303380:CDS |
| GTTTACGAGTACATCATAAG+TGG | 0.577031 | 2_3:-60590422 | Msa0303380:five_prime_UTR |
| ATCAAACATCAAAAGTGCAT+CGG | 0.579682 | 2_3:+60590691 | None:intergenic |
| TGCTTCAAACCTAACAGAGA+GGG | 0.579793 | 2_3:-60590288 | Msa0303380:five_prime_UTR |
| GATGGACTGGTCTTAGGGGA+GGG | 0.579930 | 2_3:-60588167 | Msa0303380:three_prime_UTR |
| AGTCGAACCTTCAAAGCTGA+AGG | 0.580363 | 2_3:-60588462 | Msa0303380:three_prime_UTR |
| TATGAAGGAAATGGAAGTTG+AGG | 0.581993 | 2_3:-60590978 | Msa0303380:five_prime_UTR |
| CTGAAGGCTGGCTGACGCGG+AGG | 0.582125 | 2_3:-60588446 | Msa0303380:three_prime_UTR |
| ATGCTCTCGTGATCTAGTGA+AGG | 0.585391 | 2_3:-60588112 | Msa0303380:three_prime_UTR |
| ATAAGTGGCCTTTACAACAT+AGG | 0.587644 | 2_3:-60590407 | Msa0303380:five_prime_UTR |
| CGACATGACAACGTTGACAA+AGG | 0.590619 | 2_3:+60591119 | None:intergenic |
| TAGAGCAGGTAGAATGAATG+AGG | 0.597801 | 2_3:-60590906 | Msa0303380:five_prime_UTR |
| TTTAGTAGATTGCAACCTTG+AGG | 0.598397 | 2_3:-60588337 | Msa0303380:three_prime_UTR |
| GCATAACTGTTTGATGAAGG+AGG | 0.603385 | 2_3:+60590625 | None:intergenic |
| GGCAGGAGATGCAAGAATGT+GGG | 0.604659 | 2_3:-60590463 | Msa0303380:five_prime_UTR |
| GAGGTTATAGTCCCAGTAGG+AGG | 0.607543 | 2_3:+60590644 | None:intergenic |
| TGAAGGAAATGGAAGTTGAG+GGG | 0.610461 | 2_3:-60590976 | Msa0303380:five_prime_UTR |
| TGGTAACTACCAACATCCCT+AGG | 0.611358 | 2_3:+60591367 | None:intergenic |
| CTAGTGCCTTAACAATGACA+TGG | 0.611916 | 2_3:+60591347 | None:intergenic |
| ATCATCATAGCTGCATATGG+TGG | 0.614246 | 2_3:+60590593 | None:intergenic |
| ACCACGTAGTTTATCTTCAG+GGG | 0.614563 | 2_3:+60591555 | None:intergenic |
| TTTGATGAGATGTTAAGGCA+AGG | 0.615366 | 2_3:-60590674 | Msa0303380:five_prime_UTR |
| TGATGGACTGGTCTTAGGGG+AGG | 0.617319 | 2_3:-60588168 | Msa0303380:three_prime_UTR |
| TGCTCTCGTGATCTAGTGAA+GGG | 0.619024 | 2_3:-60588111 | Msa0303380:three_prime_UTR |
| CTTGCATTCAAGTTACCCCA+AGG | 0.620413 | 2_3:+60588079 | None:intergenic |
| GAACGACACACTTACAAACT+CGG | 0.620791 | 2_3:-60588614 | Msa0303380:CDS |
| ATGGACTGGTCTTAGGGGAG+GGG | 0.630319 | 2_3:-60588166 | Msa0303380:three_prime_UTR |
| AAGGAGGTTATAGTCCCAGT+AGG | 0.631328 | 2_3:+60590641 | None:intergenic |
| ATATGATGGACTGGTCTTAG+GGG | 0.633170 | 2_3:-60588171 | Msa0303380:three_prime_UTR |
| TGGCAGGAGATGCAAGAATG+TGG | 0.637681 | 2_3:-60590464 | Msa0303380:five_prime_UTR |
| GAATTAGAGCAGGCTGACGA+CGG | 0.640862 | 2_3:-60588409 | Msa0303380:three_prime_UTR |
| CAAAAGCACATTCAAAGCGT+CGG | 0.642730 | 2_3:+60591147 | None:intergenic |
| GGAAAAGAAGAAATCACAGG+TGG | 0.644080 | 2_3:-60588388 | Msa0303380:three_prime_UTR |
| TTGAACTTTGGGAATTTGGG+TGG | 0.644522 | 2_3:-60591439 | Msa0303380:five_prime_UTR |
| GACGGAAAAGAAGAAATCAC+AGG | 0.663512 | 2_3:-60588391 | Msa0303380:three_prime_UTR |
| GAAGGGAGAGTGCTCCCTTG+GGG | 0.664460 | 2_3:-60588094 | Msa0303380:three_prime_UTR |
| TTGCATTCAAGTTACCCCAA+GGG | 0.672485 | 2_3:+60588080 | None:intergenic |
| GAAAAGAAGAAATCACAGGT+GGG | 0.672572 | 2_3:-60588387 | Msa0303380:three_prime_UTR |
| ACTAGATCCGTAATGTTGCG+AGG | 0.681910 | 2_3:+60590105 | None:intergenic |
| TTGCTTCAAACCTAACAGAG+AGG | 0.703672 | 2_3:-60590289 | Msa0303380:five_prime_UTR |
| AAATGCTGTTCTTGTCATGG+AGG | 0.741667 | 2_3:-60590375 | Msa0303380:five_prime_UTR |
| TCCCCTGAAGATAAACTACG+TGG | 0.767720 | 2_3:-60591556 | Msa0303380:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGGTTATGTTTTTTAATT+GGG | - | chr2_3:60588244-60588263 | Msa0303380:three_prime_UTR | 15.0% |
| !!! | ATTTTTAATTTCATTTCGAT+TGG | - | chr2_3:60588827-60588846 | Msa0303380:intron | 15.0% |
| !! | TAATTAAATAGTCAATAAAC+TGG | + | chr2_3:60590556-60590575 | None:intergenic | 15.0% |
| !! | AAAATTAATTTAAATGAGCA+AGG | + | chr2_3:60590746-60590765 | None:intergenic | 15.0% |
| !! | TATCTTTCTTCAAAAACTAA+AGG | - | chr2_3:60588121-60588140 | Msa0303380:three_prime_UTR | 20.0% |
| !! | ATCTTTCTTCAAAAACTAAA+GGG | - | chr2_3:60588122-60588141 | Msa0303380:three_prime_UTR | 20.0% |
| !! | GATGTAAATGTTGATATTAT+TGG | - | chr2_3:60588185-60588204 | Msa0303380:three_prime_UTR | 20.0% |
| !!! | CAATGGTTATGTTTTTTAAT+TGG | - | chr2_3:60588243-60588262 | Msa0303380:three_prime_UTR | 20.0% |
| !!! | ATTTTTCATTTTTATGATGC+AGG | - | chr2_3:60588340-60588359 | Msa0303380:three_prime_UTR | 20.0% |
| !! | TAGTTAAAAAATTCAGTGTA+AGG | + | chr2_3:60589579-60589598 | None:intergenic | 20.0% |
| !!! | TTTTTAATATAGCTGTCTTT+TGG | - | chr2_3:60589667-60589686 | Msa0303380:intron | 20.0% |
| !!! | TTTTAATATAGCTGTCTTTT+GGG | - | chr2_3:60589668-60589687 | Msa0303380:intron | 20.0% |
| !! | GCATTAAAGAATATTTACAA+AGG | + | chr2_3:60589911-60589930 | None:intergenic | 20.0% |
| !! | ATCATCACTATTAAATAACT+TGG | - | chr2_3:60590152-60590171 | Msa0303380:exon | 20.0% |
| !! | ATGCAGATAATACATATTTA+TGG | + | chr2_3:60590451-60590470 | None:intergenic | 20.0% |
| !!! | TCATACTGACTATAATTAAT+TGG | - | chr2_3:60590615-60590634 | Msa0303380:five_prime_UTR | 20.0% |
| !!! | ATAATTCATTTGAAACAGAA+TGG | - | chr2_3:60590873-60590892 | Msa0303380:five_prime_UTR | 20.0% |
| !! | CATCATATTAATAATCCTAT+AGG | + | chr2_3:60591471-60591490 | None:intergenic | 20.0% |
| !! | CTATAGGATTATTAATATGA+TGG | - | chr2_3:60591469-60591488 | Msa0303380:five_prime_UTR | 20.0% |
| ! | ATTTACATCAATACACACAT+TGG | + | chr2_3:60588174-60588193 | None:intergenic | 25.0% |
| !!! | ATTGGTAAAGTATTGAACTT+TGG | - | chr2_3:60588203-60588222 | Msa0303380:three_prime_UTR | 25.0% |
| !!! | TTGGTAAAGTATTGAACTTT+GGG | - | chr2_3:60588204-60588223 | Msa0303380:three_prime_UTR | 25.0% |
| !!! | ATTGATAGTTTTGTCAATGT+CGG | - | chr2_3:60588422-60588441 | Msa0303380:three_prime_UTR | 25.0% |
| !!! | TCGGTTTTTAATTCAATGAA+AGG | - | chr2_3:60588569-60588588 | Msa0303380:CDS | 25.0% |
| !!! | CGGTTTTTAATTCAATGAAA+GGG | - | chr2_3:60588570-60588589 | Msa0303380:CDS | 25.0% |
| !!! | TTTTAATTCAATGAAAGGGA+AGG | - | chr2_3:60588574-60588593 | Msa0303380:CDS | 25.0% |
| !! | GGTGTATGAAGTATTATAAT+GGG | - | chr2_3:60588861-60588880 | Msa0303380:intron | 25.0% |
| ! | CTAGAATATGTATGAATGTT+AGG | + | chr2_3:60588908-60588927 | None:intergenic | 25.0% |
| ! | AAGGAACGGTAAATAATTTA+AGG | + | chr2_3:60589611-60589630 | None:intergenic | 25.0% |
| ! | TAAATGTTATAGTGTAGTCT+TGG | - | chr2_3:60589695-60589714 | Msa0303380:intron | 25.0% |
| ! | TAATTGTATCCATACGAAAT+TGG | - | chr2_3:60589737-60589756 | Msa0303380:intron | 25.0% |
| !! | ACGTATTTCTATTTGCAATA+TGG | - | chr2_3:60589762-60589781 | Msa0303380:intron | 25.0% |
| !! | CGTATTTCTATTTGCAATAT+GGG | - | chr2_3:60589763-60589782 | Msa0303380:intron | 25.0% |
| !! | AGCTAGTAGAAATTTAAAGT+TGG | - | chr2_3:60589948-60589967 | Msa0303380:intron | 25.0% |
| !!! | ATTTAAAGTTGGTTTTTCTG+TGG | - | chr2_3:60589959-60589978 | Msa0303380:intron | 25.0% |
| !! | GAACTTAACTTTTGTTGAAT+AGG | - | chr2_3:60590039-60590058 | Msa0303380:intron | 25.0% |
| !! | TTAACTTTTGTTGAATAGGT+AGG | - | chr2_3:60590043-60590062 | Msa0303380:intron | 25.0% |
| !!! | ACTATTAAATAACTTGGTGT+TGG | - | chr2_3:60590158-60590177 | Msa0303380:exon | 25.0% |
| ! | TTTCAACTTTCAATAAACAG+GGG | + | chr2_3:60590300-60590319 | None:intergenic | 25.0% |
| ! | GTTTCAACTTTCAATAAACA+GGG | + | chr2_3:60590301-60590320 | None:intergenic | 25.0% |
| ! | TGTTTCAACTTTCAATAAAC+AGG | + | chr2_3:60590302-60590321 | None:intergenic | 25.0% |
| ! | TATTGAAAGTTGAAACACAT+AGG | - | chr2_3:60590305-60590324 | Msa0303380:five_prime_UTR | 25.0% |
| ! | ATAGTCAATAAACTGGAAAA+GGG | + | chr2_3:60590549-60590568 | None:intergenic | 25.0% |
| ! | AATAGTCAATAAACTGGAAA+AGG | + | chr2_3:60590550-60590569 | None:intergenic | 25.0% |
| ! | TTATAGTCAGTATGACATAT+TGG | + | chr2_3:60590610-60590629 | None:intergenic | 25.0% |
| !!! | GAGTTTGTTTAATTTTTTGC+TGG | - | chr2_3:60590702-60590721 | Msa0303380:five_prime_UTR | 25.0% |
| ! | TTGTTAGGACTTAGAATAAA+AGG | - | chr2_3:60591366-60591385 | Msa0303380:five_prime_UTR | 25.0% |
| ! | TTAGAATAAAAGGAGTTTGT+TGG | - | chr2_3:60591376-60591395 | Msa0303380:five_prime_UTR | 25.0% |
| TCTTCAAAAACTAAAGGGTA+AGG | - | chr2_3:60588127-60588146 | Msa0303380:three_prime_UTR | 30.0% | |
| ! | AGTATTGAACTTTGGGAATT+TGG | - | chr2_3:60588211-60588230 | Msa0303380:three_prime_UTR | 30.0% |
| ! | GTATTGAACTTTGGGAATTT+GGG | - | chr2_3:60588212-60588231 | Msa0303380:three_prime_UTR | 30.0% |
| TAGTTACCATGTCATTGTTA+AGG | - | chr2_3:60588301-60588320 | Msa0303380:three_prime_UTR | 30.0% | |
| TTAGATGAGATGAGATTGAA+TGG | - | chr2_3:60588365-60588384 | Msa0303380:three_prime_UTR | 30.0% | |
| TCAAAAGCAATTCAGTTGTT+TGG | - | chr2_3:60588452-60588471 | Msa0303380:three_prime_UTR | 30.0% | |
| CAAAAGCAATTCAGTTGTTT+GGG | - | chr2_3:60588453-60588472 | Msa0303380:three_prime_UTR | 30.0% | |
| AATTCAGTTGTTTGGGAATT+TGG | - | chr2_3:60588460-60588479 | Msa0303380:three_prime_UTR | 30.0% | |
| GACACATATAATGTTGTTGT+TGG | - | chr2_3:60588611-60588630 | Msa0303380:CDS | 30.0% | |
| ! | ACATATAATGTTGTTGTTGG+TGG | - | chr2_3:60588614-60588633 | Msa0303380:CDS | 30.0% |
| TGAGATTGAGAAAGTTATGA+AGG | - | chr2_3:60588661-60588680 | Msa0303380:CDS | 30.0% | |
| TGAGAAAGTTATGAAGGAAA+TGG | - | chr2_3:60588667-60588686 | Msa0303380:CDS | 30.0% | |
| TTCTCATGATTTCAATACGA+TGG | - | chr2_3:60588703-60588722 | Msa0303380:CDS | 30.0% | |
| ! | ATTTCGATTGGAGATTTTGA+TGG | - | chr2_3:60588839-60588858 | Msa0303380:intron | 30.0% |
| !! | TTTCGATTGGAGATTTTGAT+GGG | - | chr2_3:60588840-60588859 | Msa0303380:intron | 30.0% |
| ! | GGGTGTATGAAGTATTATAA+TGG | - | chr2_3:60588860-60588879 | Msa0303380:intron | 30.0% |
| ! | ATCAAACATCAAAAGTGCAT+CGG | + | chr2_3:60588966-60588985 | None:intergenic | 30.0% |
| TGATGTTTGATGAGATGTTA+AGG | - | chr2_3:60588975-60588994 | Msa0303380:intron | 30.0% | |
| CTACAAGAAGACAAGAAAAT+TGG | - | chr2_3:60589084-60589103 | Msa0303380:intron | 30.0% | |
| ATTGGAGTGTAAGATATCAA+TGG | - | chr2_3:60589102-60589121 | Msa0303380:intron | 30.0% | |
| CTTTCTAAGTTTGGTAAATG+TGG | - | chr2_3:60589151-60589170 | Msa0303380:intron | 30.0% | |
| TAAAAAACGCGAGAAGTTAT+TGG | - | chr2_3:60589428-60589447 | Msa0303380:intron | 30.0% | |
| CCAGATATGTGAAAATCAAA+TGG | + | chr2_3:60589516-60589535 | None:intergenic | 30.0% | |
| !! | CCATTTGATTTTCACATATC+TGG | - | chr2_3:60589513-60589532 | Msa0303380:intron | 30.0% |
| !! | ATTTTCACATATCTGGTCTT+TGG | - | chr2_3:60589520-60589539 | Msa0303380:intron | 30.0% |
| TCGTAAATCTAGAAAAGGAA+CGG | + | chr2_3:60589625-60589644 | None:intergenic | 30.0% | |
| CCAAATCGTAAATCTAGAAA+AGG | + | chr2_3:60589630-60589649 | None:intergenic | 30.0% | |
| ! | CCTTTTCTAGATTTACGATT+TGG | - | chr2_3:60589627-60589646 | Msa0303380:intron | 30.0% |
| AATACGTTACCAATTTCGTA+TGG | + | chr2_3:60589749-60589768 | None:intergenic | 30.0% | |
| GCAACATAAACTTATTACAG+AGG | - | chr2_3:60589818-60589837 | Msa0303380:intron | 30.0% | |
| ! | CTTCATTAACCAAAGTACTT+TGG | - | chr2_3:60589867-60589886 | Msa0303380:intron | 30.0% |
| ! | GAAAAATAGCCAAAGTACTT+TGG | + | chr2_3:60589879-60589898 | None:intergenic | 30.0% |
| ! | ATATTTACAAAGGCATGACT+TGG | + | chr2_3:60589901-60589920 | None:intergenic | 30.0% |
| TTCTGCTATCTTCTTTGTAA+AGG | - | chr2_3:60590127-60590146 | Msa0303380:CDS | 30.0% | |
| GGTCCATTATGTTAATGTAA+AGG | - | chr2_3:60590202-60590221 | Msa0303380:five_prime_UTR | 30.0% | |
| GCACCTTTACATTAACATAA+TGG | + | chr2_3:60590208-60590227 | None:intergenic | 30.0% | |
| TCCTATAATCCTATAACAGA+CGG | + | chr2_3:60590349-60590368 | None:intergenic | 30.0% | |
| !!! | GTTTTGAGACAGTGATTTTT+TGG | - | chr2_3:60590405-60590424 | Msa0303380:five_prime_UTR | 30.0% |
| ATGTATTATCTGCATATGCA+TGG | - | chr2_3:60590456-60590475 | Msa0303380:five_prime_UTR | 30.0% | |
| GCATATTACTGGATTTCAAA+TGG | - | chr2_3:60590484-60590503 | Msa0303380:five_prime_UTR | 30.0% | |
| !!! | TTAATTTTTTGCTGGTGTGT+TGG | - | chr2_3:60590710-60590729 | Msa0303380:five_prime_UTR | 30.0% |
| !!! | TAATTTTTTGCTGGTGTGTT+GGG | - | chr2_3:60590711-60590730 | Msa0303380:five_prime_UTR | 30.0% |
| ! | ATTTTAGGCAAATTCATGAC+AGG | - | chr2_3:60590902-60590921 | Msa0303380:five_prime_UTR | 30.0% |
| TTGTTGGAATTAGAGTTAAG+AGG | - | chr2_3:60591392-60591411 | Msa0303380:five_prime_UTR | 30.0% | |
| ATTTCAGTTGTTAGACCTAT+AGG | - | chr2_3:60591453-60591472 | Msa0303380:five_prime_UTR | 30.0% | |
| !! | GGATTATTAATATGATGGAC+TGG | - | chr2_3:60591474-60591493 | Msa0303380:five_prime_UTR | 30.0% |
| TACCACGTAGTTTATCTTCA+GGG | + | chr2_3:60588103-60588122 | None:intergenic | 35.0% | |
| ATACCACGTAGTTTATCTTC+AGG | + | chr2_3:60588104-60588123 | None:intergenic | 35.0% | |
| TTTGGGAATTTGGATGATCT+CGG | - | chr2_3:60588470-60588489 | Msa0303380:three_prime_UTR | 35.0% | |
| !! | ATAATGTTGTTGTTGGTGGT+TGG | - | chr2_3:60588618-60588637 | Msa0303380:CDS | 35.0% |
| TATGAAGGAAATGGAAGTTG+AGG | - | chr2_3:60588676-60588695 | Msa0303380:CDS | 35.0% | |
| ATGAAGGAAATGGAAGTTGA+GGG | - | chr2_3:60588677-60588696 | Msa0303380:CDS | 35.0% | |
| !! | GAATGATTACTGCTTTTCTC+AGG | - | chr2_3:60588927-60588946 | Msa0303380:intron | 35.0% |
| TTTGATGAGATGTTAAGGCA+AGG | - | chr2_3:60588980-60588999 | Msa0303380:intron | 35.0% | |
| ATCAAACAGTTATGCAGCTA+TGG | - | chr2_3:60589037-60589056 | Msa0303380:intron | 35.0% | |
| TAGATCATCATAGCTGCATA+TGG | + | chr2_3:60589067-60589086 | None:intergenic | 35.0% | |
| CTTATGCGTCTTTCTAAGTT+TGG | - | chr2_3:60589142-60589161 | Msa0303380:intron | 35.0% | |
| GTTTACGAGTACATCATAAG+TGG | - | chr2_3:60589232-60589251 | Msa0303380:intron | 35.0% | |
| ATAAGTGGCCTTTACAACAT+AGG | - | chr2_3:60589247-60589266 | Msa0303380:intron | 35.0% | |
| CAAGTTGTCCTATGTTGTAA+AGG | + | chr2_3:60589258-60589277 | None:intergenic | 35.0% | |
| TGAAAATGCTGTTCTTGTCA+TGG | - | chr2_3:60589276-60589295 | Msa0303380:intron | 35.0% | |
| !!! | TTCTCGCGTTTTTTAGTGAA+CGG | + | chr2_3:60589423-60589442 | None:intergenic | 35.0% |
| ! | TTTTGAGCAGACATCATAAC+TGG | - | chr2_3:60589469-60589488 | Msa0303380:intron | 35.0% |
| ATGAAGTCATGTGACATTTG+CGG | + | chr2_3:60589853-60589872 | None:intergenic | 35.0% | |
| TAGCTTCTTGTAGCTAAGAA+AGG | + | chr2_3:60589933-60589952 | None:intergenic | 35.0% | |
| !!! | GTTGGTTTTTCTGTGGATTT+AGG | - | chr2_3:60589966-60589985 | Msa0303380:intron | 35.0% |
| ! | GTTTTTCTGTGGATTTAGGA+AGG | - | chr2_3:60589970-60589989 | Msa0303380:intron | 35.0% |
| ATAACTTTATTCTGCTGCTG+TGG | - | chr2_3:60590181-60590200 | Msa0303380:five_prime_UTR | 35.0% | |
| TAGGAAAAGAAACACAGAAG+TGG | + | chr2_3:60590230-60590249 | None:intergenic | 35.0% | |
| ! | TTCCTATCTTTTTGCACTTC+CGG | - | chr2_3:60590244-60590263 | Msa0303380:five_prime_UTR | 35.0% |
| CAGAAAGATAATAACTAGCC+CGG | + | chr2_3:60590266-60590285 | None:intergenic | 35.0% | |
| !! | GGGCTAGTTATTATCTTTCT+GGG | - | chr2_3:60590265-60590284 | Msa0303380:five_prime_UTR | 35.0% |
| GAAAGTTGAAACACATAGGT+AGG | - | chr2_3:60590309-60590328 | Msa0303380:five_prime_UTR | 35.0% | |
| ACCGTCTGTTATAGGATTAT+AGG | - | chr2_3:60590345-60590364 | Msa0303380:five_prime_UTR | 35.0% | |
| GCATGGTATTTGCATATTAC+TGG | - | chr2_3:60590473-60590492 | Msa0303380:five_prime_UTR | 35.0% | |
| ATTTCAAATGGAGTCCCTTA+GGG | - | chr2_3:60590496-60590515 | Msa0303380:five_prime_UTR | 35.0% | |
| !!! | AATTTTTTGCTGGTGTGTTG+GGG | - | chr2_3:60590712-60590731 | Msa0303380:five_prime_UTR | 35.0% |
| ! | ACAGAATGGCAGCTAATTTT+AGG | - | chr2_3:60590887-60590906 | Msa0303380:five_prime_UTR | 35.0% |
| CATGTCAGAAATCTTGCTTA+TGG | + | chr2_3:60590958-60590977 | None:intergenic | 35.0% | |
| ATTGAAACCGTAACAGATCT+TGG | - | chr2_3:60591002-60591021 | Msa0303380:five_prime_UTR | 35.0% | |
| AACACTGTAAGAATTAGAGC+AGG | - | chr2_3:60591235-60591254 | Msa0303380:five_prime_UTR | 35.0% | |
| GAAAAGAAGAAATCACAGGT+GGG | - | chr2_3:60591267-60591286 | Msa0303380:five_prime_UTR | 35.0% | |
| TTTAGTAGATTGCAACCTTG+AGG | - | chr2_3:60591317-60591336 | Msa0303380:five_prime_UTR | 35.0% | |
| TCAAAACAATCTTGTCCTCA+AGG | + | chr2_3:60591335-60591354 | None:intergenic | 35.0% | |
| !! | TTGAGGACAAGATTGTTTTG+AGG | - | chr2_3:60591334-60591353 | Msa0303380:five_prime_UTR | 35.0% |
| ! | GTATAGCTGTTGAGTTTGTT+AGG | - | chr2_3:60591418-60591437 | Msa0303380:five_prime_UTR | 35.0% |
| !! | TAATATGATGGACTGGTCTT+AGG | - | chr2_3:60591481-60591500 | Msa0303380:five_prime_UTR | 35.0% |
| !! | AATATGATGGACTGGTCTTA+GGG | - | chr2_3:60591482-60591501 | Msa0303380:five_prime_UTR | 35.0% |
| TCAGAATCCAAATCCGTTGA+TGG | - | chr2_3:60588068-60588087 | Msa0303380:three_prime_UTR | 40.0% | |
| CAGAATCCAAATCCGTTGAT+GGG | - | chr2_3:60588069-60588088 | Msa0303380:three_prime_UTR | 40.0% | |
| ! | CAAAAACCCATCAACGGATT+TGG | + | chr2_3:60588078-60588097 | None:intergenic | 40.0% |
| ACCACGTAGTTTATCTTCAG+GGG | + | chr2_3:60588102-60588121 | None:intergenic | 40.0% | |
| ! | TTGAACTTTGGGAATTTGGG+TGG | - | chr2_3:60588215-60588234 | Msa0303380:three_prime_UTR | 40.0% |
| TTGGGCACTTAAACAACCAA+TGG | - | chr2_3:60588262-60588281 | Msa0303380:three_prime_UTR | 40.0% | |
| TTAAACAACCAATGGTGCCT+AGG | - | chr2_3:60588270-60588289 | Msa0303380:three_prime_UTR | 40.0% | |
| TAAACAACCAATGGTGCCTA+GGG | - | chr2_3:60588271-60588290 | Msa0303380:three_prime_UTR | 40.0% | |
| CTAGTGCCTTAACAATGACA+TGG | + | chr2_3:60588310-60588329 | None:intergenic | 40.0% | |
| ! | CATGTCATTGTTAAGGCACT+AGG | - | chr2_3:60588308-60588327 | Msa0303380:three_prime_UTR | 40.0% |
| ! | TTGTTAAGGCACTAGGAAGA+AGG | - | chr2_3:60588315-60588334 | Msa0303380:three_prime_UTR | 40.0% |
| TTGGGAATTTGGATGATCTC+GGG | - | chr2_3:60588471-60588490 | Msa0303380:three_prime_UTR | 40.0% | |
| ! | CAAAAGCACATTCAAAGCGT+CGG | + | chr2_3:60588510-60588529 | None:intergenic | 40.0% |
| CTTTGTCAACGTTGTCATGT+CGG | - | chr2_3:60588536-60588555 | Msa0303380:CDS | 40.0% | |
| TGAAGGAAATGGAAGTTGAG+GGG | - | chr2_3:60588678-60588697 | Msa0303380:CDS | 40.0% | |
| TACGATGGCTTTCTTTCTTG+AGG | - | chr2_3:60588718-60588737 | Msa0303380:CDS | 40.0% | |
| ACGATGGCTTTCTTTCTTGA+GGG | - | chr2_3:60588719-60588738 | Msa0303380:CDS | 40.0% | |
| GCTTTCTTTCTTGAGGGTTT+GGG | - | chr2_3:60588725-60588744 | Msa0303380:CDS | 40.0% | |
| TAGAGCAGGTAGAATGAATG+AGG | - | chr2_3:60588748-60588767 | Msa0303380:intron | 40.0% | |
| TAGAATGAATGAGGCTGTTG+AGG | - | chr2_3:60588757-60588776 | Msa0303380:intron | 40.0% | |
| ! | AATGAGGCTGTTGAGGTTTT+CGG | - | chr2_3:60588764-60588783 | Msa0303380:intron | 40.0% |
| ! | TGAGGTTTTCGGTAGTATGA+AGG | - | chr2_3:60588775-60588794 | Msa0303380:intron | 40.0% |
| GCATAACTGTTTGATGAAGG+AGG | + | chr2_3:60589032-60589051 | None:intergenic | 40.0% | |
| GCTGCATAACTGTTTGATGA+AGG | + | chr2_3:60589035-60589054 | None:intergenic | 40.0% | |
| ATCATCATAGCTGCATATGG+TGG | + | chr2_3:60589064-60589083 | None:intergenic | 40.0% | |
| GTGGAACATTGTTGAGTGTA+TGG | - | chr2_3:60589170-60589189 | Msa0303380:intron | 40.0% | |
| AACATTGTTGAGTGTATGGC+AGG | - | chr2_3:60589174-60589193 | Msa0303380:intron | 40.0% | |
| AAATGCTGTTCTTGTCATGG+AGG | - | chr2_3:60589279-60589298 | Msa0303380:intron | 40.0% | |
| TTACTGTATACAAGCCTGCT+GGG | + | chr2_3:60589328-60589347 | None:intergenic | 40.0% | |
| TTTACTGTATACAAGCCTGC+TGG | + | chr2_3:60589329-60589348 | None:intergenic | 40.0% | |
| TTGCTTCAAACCTAACAGAG+AGG | - | chr2_3:60589365-60589384 | Msa0303380:intron | 40.0% | |
| TGCTTCAAACCTAACAGAGA+GGG | - | chr2_3:60589366-60589385 | Msa0303380:intron | 40.0% | |
| !!! | TCTCGCGTTTTTTAGTGAAC+GGG | + | chr2_3:60589422-60589441 | None:intergenic | 40.0% |
| AGAAGTTATTGGCGCGATAA+CGG | - | chr2_3:60589439-60589458 | Msa0303380:intron | 40.0% | |
| GCAATATGGGAATCCTTCTT+AGG | - | chr2_3:60589776-60589795 | Msa0303380:intron | 40.0% | |
| CTTCTTAGGAGTTAGGACAT+GGG | - | chr2_3:60589790-60589809 | Msa0303380:intron | 40.0% | |
| ! | TCCTATCTTTTTGCACTTCC+GGG | - | chr2_3:60590245-60590264 | Msa0303380:five_prime_UTR | 40.0% |
| !! | CGGGCTAGTTATTATCTTTC+TGG | - | chr2_3:60590264-60590283 | Msa0303380:five_prime_UTR | 40.0% |
| TATAACAGACGGTACTTCCA+TGG | + | chr2_3:60590338-60590357 | None:intergenic | 40.0% | |
| !! | ATGGAAGTACCGTCTGTTAT+AGG | - | chr2_3:60590337-60590356 | Msa0303380:five_prime_UTR | 40.0% |
| GATTTCAAATGGAGTCCCTT+AGG | - | chr2_3:60590495-60590514 | Msa0303380:five_prime_UTR | 40.0% | |
| ATATATGCCGTGATCCCTAA+GGG | + | chr2_3:60590513-60590532 | None:intergenic | 40.0% | |
| !! | ATTTAGTGTTGCTTGCTGGT+TGG | - | chr2_3:60590640-60590659 | Msa0303380:five_prime_UTR | 40.0% |
| ATGACAGGATTCCAACAAGA+TGG | - | chr2_3:60590917-60590936 | Msa0303380:five_prime_UTR | 40.0% | |
| TTGCATGGTATCCATCTTGT+TGG | + | chr2_3:60590931-60590950 | None:intergenic | 40.0% | |
| GAACGACACACTTACAAACT+CGG | - | chr2_3:60591040-60591059 | Msa0303380:five_prime_UTR | 40.0% | |
| !!! | CAGCTTTTTCATCCAAGAAC+GGG | + | chr2_3:60591096-60591115 | None:intergenic | 40.0% |
| !!! | CCAGCTTTTTCATCCAAGAA+CGG | + | chr2_3:60591097-60591116 | None:intergenic | 40.0% |
| ! | GGTTTTACACCTACCTTCAA+AGG | - | chr2_3:60591115-60591134 | Msa0303380:five_prime_UTR | 40.0% |
| GACGGAAAAGAAGAAATCAC+AGG | - | chr2_3:60591263-60591282 | Msa0303380:five_prime_UTR | 40.0% | |
| GGAAAAGAAGAAATCACAGG+TGG | - | chr2_3:60591266-60591285 | Msa0303380:five_prime_UTR | 40.0% | |
| !!! | AGGACAAGATTGTTTTGAGG+AGG | - | chr2_3:60591337-60591356 | Msa0303380:five_prime_UTR | 40.0% |
| !!! | GGACAAGATTGTTTTGAGGA+GGG | - | chr2_3:60591338-60591357 | Msa0303380:five_prime_UTR | 40.0% |
| !!! | GACAAGATTGTTTTGAGGAG+GGG | - | chr2_3:60591339-60591358 | Msa0303380:five_prime_UTR | 40.0% |
| !! | ATATGATGGACTGGTCTTAG+GGG | - | chr2_3:60591483-60591502 | Msa0303380:five_prime_UTR | 40.0% |
| ! | TTGCATTCAAGTTACCCCAA+GGG | + | chr2_3:60591577-60591596 | None:intergenic | 40.0% |
| AGGGGACAAAAACCCATCAA+CGG | + | chr2_3:60588084-60588103 | None:intergenic | 45.0% | |
| TCCCCTGAAGATAAACTACG+TGG | - | chr2_3:60588098-60588117 | Msa0303380:three_prime_UTR | 45.0% | |
| GAATTTGGGTGGTGAAGCAA+TGG | - | chr2_3:60588226-60588245 | Msa0303380:three_prime_UTR | 45.0% | |
| TGGTAACTACCAACATCCCT+AGG | + | chr2_3:60588290-60588309 | None:intergenic | 45.0% | |
| CGACATGACAACGTTGACAA+AGG | + | chr2_3:60588538-60588557 | None:intergenic | 45.0% | |
| !! | TGTTGGTGGTTGGTCTAAGT+TGG | - | chr2_3:60588628-60588647 | Msa0303380:CDS | 45.0% |
| !! | GTTGGTGGTTGGTCTAAGTT+GGG | - | chr2_3:60588629-60588648 | Msa0303380:CDS | 45.0% |
| !! | TGGTTGGTCTAAGTTGGGTA+GGG | - | chr2_3:60588634-60588653 | Msa0303380:CDS | 45.0% |
| GGCTTTCTTTCTTGAGGGTT+TGG | - | chr2_3:60588724-60588743 | Msa0303380:CDS | 45.0% | |
| !! | TTACTGCTTTTCTCAGGACC+AGG | - | chr2_3:60588933-60588952 | Msa0303380:intron | 45.0% |
| ! | TTTTCTCAGGACCAGGAAAG+TGG | - | chr2_3:60588940-60588959 | Msa0303380:intron | 45.0% |
| AAGGAGGTTATAGTCCCAGT+AGG | + | chr2_3:60589016-60589035 | None:intergenic | 45.0% | |
| GCTACTTCCTCGCAACATTA+CGG | - | chr2_3:60589542-60589561 | Msa0303380:intron | 45.0% | |
| ACTAGATCCGTAATGTTGCG+AGG | + | chr2_3:60589552-60589571 | None:intergenic | 45.0% | |
| GGGAATCCTTCTTAGGAGTT+AGG | - | chr2_3:60589783-60589802 | Msa0303380:intron | 45.0% | |
| CCATGTCCTAACTCCTAAGA+AGG | + | chr2_3:60589792-60589811 | None:intergenic | 45.0% | |
| CCTTCTTAGGAGTTAGGACA+TGG | - | chr2_3:60589789-60589808 | Msa0303380:intron | 45.0% | |
| AAGTCATGTGACATTTGCGG+AGG | + | chr2_3:60589850-60589869 | None:intergenic | 45.0% | |
| AACACATAGGTAGGTTGCCA+TGG | - | chr2_3:60590318-60590337 | Msa0303380:five_prime_UTR | 45.0% | |
| GATATATGCCGTGATCCCTA+AGG | + | chr2_3:60590514-60590533 | None:intergenic | 45.0% | |
| !! | TGGAAAAGGGTGTCAAGAAC+AGG | + | chr2_3:60590536-60590555 | None:intergenic | 45.0% |
| !! | GGAGATTTAGTGTTGCTTGC+TGG | - | chr2_3:60590636-60590655 | Msa0303380:five_prime_UTR | 45.0% |
| CTTGCTTATGGAAGCTTGCA+TGG | + | chr2_3:60590946-60590965 | None:intergenic | 45.0% | |
| TGCTGGTCCAAGATCTGTTA+CGG | + | chr2_3:60591012-60591031 | None:intergenic | 45.0% | |
| ATCAAGAACAGACCCGTTCT+TGG | - | chr2_3:60591081-60591100 | Msa0303380:five_prime_UTR | 45.0% | |
| CCGTTCTTGGATGAAAAAGC+TGG | - | chr2_3:60591094-60591113 | Msa0303380:five_prime_UTR | 45.0% | |
| TACACCTACCTTCAAAGGCA+CGG | - | chr2_3:60591120-60591139 | Msa0303380:five_prime_UTR | 45.0% | |
| TATTGGATCCGTGCCTTTGA+AGG | + | chr2_3:60591131-60591150 | None:intergenic | 45.0% | |
| ! | TTCAAAGGCACGGATCCAAT+AGG | - | chr2_3:60591130-60591149 | Msa0303380:five_prime_UTR | 45.0% |
| ! | TCAAAGGCACGGATCCAATA+GGG | - | chr2_3:60591131-60591150 | Msa0303380:five_prime_UTR | 45.0% |
| AGTCGAACCTTCAAAGCTGA+AGG | - | chr2_3:60591192-60591211 | Msa0303380:five_prime_UTR | 45.0% | |
| !!! | TTGAGGAGGGGTGTTTTGTT+AGG | - | chr2_3:60591351-60591370 | Msa0303380:five_prime_UTR | 45.0% |
| ATGCTCTCGTGATCTAGTGA+AGG | - | chr2_3:60591542-60591561 | Msa0303380:five_prime_UTR | 45.0% | |
| TGCTCTCGTGATCTAGTGAA+GGG | - | chr2_3:60591543-60591562 | Msa0303380:five_prime_UTR | 45.0% | |
| ! | CTTGCATTCAAGTTACCCCA+AGG | + | chr2_3:60591578-60591597 | None:intergenic | 45.0% |
| CTTGGGGTAACTTGAATGCA+AGG | - | chr2_3:60591576-60591595 | Msa0303380:five_prime_UTR | 45.0% | |
| !! | GTGGTTGGTCTAAGTTGGGT+AGG | - | chr2_3:60588633-60588652 | Msa0303380:CDS | 50.0% |
| AAGGAGTTGTGCCTCCTACT+GGG | - | chr2_3:60588999-60589018 | Msa0303380:intron | 50.0% | |
| GAGGTTATAGTCCCAGTAGG+AGG | + | chr2_3:60589013-60589032 | None:intergenic | 50.0% | |
| TGGCAGGAGATGCAAGAATG+TGG | - | chr2_3:60589190-60589209 | Msa0303380:intron | 50.0% | |
| GGCAGGAGATGCAAGAATGT+GGG | - | chr2_3:60589191-60589210 | Msa0303380:intron | 50.0% | |
| TGCTGTTCTTGTCATGGAGG+AGG | - | chr2_3:60589282-60589301 | Msa0303380:intron | 50.0% | |
| ACCTAACAGAGAGGGCTTAC+AGG | - | chr2_3:60589374-60589393 | Msa0303380:intron | 50.0% | |
| ! | GTTATTGGCGCGATAACGGT+TGG | - | chr2_3:60589443-60589462 | Msa0303380:intron | 50.0% |
| ! | GCCCGGAAGTGCAAAAAGAT+AGG | + | chr2_3:60590249-60590268 | None:intergenic | 50.0% |
| CAAGCTGCAACGCGCAATTA+GGG | + | chr2_3:60590384-60590403 | None:intergenic | 50.0% | |
| TCAAGCTGCAACGCGCAATT+AGG | + | chr2_3:60590385-60590404 | None:intergenic | 50.0% | |
| ATGGAGTCCCTTAGGGATCA+CGG | - | chr2_3:60590503-60590522 | Msa0303380:five_prime_UTR | 50.0% | |
| ! | TTTTGCTGGTGTGTTGGGGA+TGG | - | chr2_3:60590716-60590735 | Msa0303380:five_prime_UTR | 50.0% |
| ! | GTGTCGTTCTTCTTGACTGC+TGG | + | chr2_3:60591029-60591048 | None:intergenic | 50.0% |
| GAACCTTCAAAGCTGAAGGC+TGG | - | chr2_3:60591196-60591215 | Msa0303380:five_prime_UTR | 50.0% | |
| GAATTAGAGCAGGCTGACGA+CGG | - | chr2_3:60591245-60591264 | Msa0303380:five_prime_UTR | 50.0% | |
| CCAACATCCCTAGGCACCAT+TGG | + | chr2_3:60588281-60588300 | None:intergenic | 55.0% | |
| CCAATGGTGCCTAGGGATGT+TGG | - | chr2_3:60588278-60588297 | Msa0303380:three_prime_UTR | 55.0% | |
| !! | TCATGTCGGTGCTGCAGCTT+CGG | - | chr2_3:60588550-60588569 | Msa0303380:CDS | 55.0% |
| CTTGAGGGTTTGGGTAGAGC+AGG | - | chr2_3:60588734-60588753 | Msa0303380:intron | 55.0% | |
| ! | AAGTGCATCGGCCACTTTCC+TGG | + | chr2_3:60588954-60588973 | None:intergenic | 55.0% |
| CAAGGAGTTGTGCCTCCTAC+TGG | - | chr2_3:60588998-60589017 | Msa0303380:intron | 55.0% | |
| ATGGAGGAGGCTTTGCGCAA+AGG | - | chr2_3:60589295-60589314 | Msa0303380:intron | 55.0% | |
| TGGAGGAGGCTTTGCGCAAA+GGG | - | chr2_3:60589296-60589315 | Msa0303380:intron | 55.0% | |
| GCCTGTAAGCCCTCTCTGTT+AGG | + | chr2_3:60589378-60589397 | None:intergenic | 55.0% | |
| ! | GGATCCGTGCCTTTGAAGGT+AGG | + | chr2_3:60591127-60591146 | None:intergenic | 55.0% |
| CACGGATCCAATAGGGTTGC+TGG | - | chr2_3:60591138-60591157 | Msa0303380:five_prime_UTR | 55.0% | |
| GTGAGAGCCAGCAACCCTAT+TGG | + | chr2_3:60591148-60591167 | None:intergenic | 55.0% | |
| ! | CAGCCAGCCTTCAGCTTTGA+AGG | + | chr2_3:60591202-60591221 | None:intergenic | 55.0% |
| !! | TGATGGACTGGTCTTAGGGG+AGG | - | chr2_3:60591486-60591505 | Msa0303380:five_prime_UTR | 55.0% |
| !! | GATGGACTGGTCTTAGGGGA+GGG | - | chr2_3:60591487-60591506 | Msa0303380:five_prime_UTR | 55.0% |
| !! | ATGGACTGGTCTTAGGGGAG+GGG | - | chr2_3:60591488-60591507 | Msa0303380:five_prime_UTR | 55.0% |
| !! | TGAAGGGAGAGTGCTCCCTT+GGG | - | chr2_3:60591559-60591578 | Msa0303380:five_prime_UTR | 55.0% |
| GCAAAGGGTTCTGTCCCAGC+AGG | - | chr2_3:60589311-60589330 | Msa0303380:intron | 60.0% | |
| ! | AAGCTGAAGGCTGGCTGACG+CGG | - | chr2_3:60591205-60591224 | Msa0303380:five_prime_UTR | 60.0% |
| !! | GTGAAGGGAGAGTGCTCCCT+TGG | - | chr2_3:60591558-60591577 | Msa0303380:five_prime_UTR | 60.0% |
| !! | GAAGGGAGAGTGCTCCCTTG+GGG | - | chr2_3:60591560-60591579 | Msa0303380:five_prime_UTR | 60.0% |
| ! | CTGAAGGCTGGCTGACGCGG+AGG | - | chr2_3:60591208-60591227 | Msa0303380:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 60588057 | 60591619 | 60588057 | ID=Msa0303380;Name=Msa0303380 |
| chr2_3 | mRNA | 60588057 | 60591619 | 60588057 | ID=Msa0303380-mRNA-1;Parent=Msa0303380;Name=Msa0303380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=1453|1|1|1|0|0|2|468|95 |
| chr2_3 | exon | 60588057 | 60588752 | 60588057 | ID=Msa0303380-mRNA-1:exon:19802;Parent=Msa0303380-mRNA-1 |
| chr2_3 | exon | 60590107 | 60591619 | 60590107 | ID=Msa0303380-mRNA-1:exon:19801;Parent=Msa0303380-mRNA-1 |
| chr2_3 | five_prime_UTR | 60590167 | 60591619 | 60590167 | ID=Msa0303380-mRNA-1:five_prime_utr;Parent=Msa0303380-mRNA-1 |
| chr2_3 | CDS | 60590107 | 60590166 | 60590107 | ID=Msa0303380-mRNA-1:cds;Parent=Msa0303380-mRNA-1 |
| chr2_3 | CDS | 60588525 | 60588752 | 60588525 | ID=Msa0303380-mRNA-1:cds;Parent=Msa0303380-mRNA-1 |
| chr2_3 | three_prime_UTR | 60588057 | 60588524 | 60588057 | ID=Msa0303380-mRNA-1:three_prime_utr;Parent=Msa0303380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
