AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1091230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1091230 MtrunA17_Chr7g0214801 92.880 309 18 3 1 308 1 306 0.0 532
Msa1091230 MtrunA17_Chr7g0219091 87.048 332 37 1 287 618 136 461 6.31e-165 479
Msa1091230 MtrunA17_Chr1g0195051 45.704 291 149 5 22 308 2 287 2.68e-72 240
Msa1091230 MtrunA17_Chr3g0145661 45.161 248 124 5 69 306 19 264 3.72e-67 225
Msa1091230 MtrunA17_Chr7g0272261 47.244 254 128 3 40 287 1 254 3.84e-64 218
Msa1091230 MtrunA17_Chr1g0180411 43.643 291 149 7 8 291 6 288 8.05e-64 218
Msa1091230 MtrunA17_Chr7g0264851 32.042 284 132 5 14 289 2 232 1.50e-40 154
Msa1091230 MtrunA17_Chr7g0264831 49.057 159 70 5 29 180 19 173 2.27e-38 141
Msa1091230 MtrunA17_Chr7g0235151 40.078 257 125 9 353 607 220 449 9.06e-34 135
Msa1091230 MtrunA17_Chr4g0061541 39.048 210 101 6 308 512 177 364 1.34e-27 114
Msa1091230 MtrunA17_Chr4g0043211 35.000 200 84 7 359 556 242 397 5.16e-20 93.6
Msa1091230 MtrunA17_Chr7g0262051 31.933 238 130 7 370 602 242 452 6.63e-18 86.7
Msa1091230 MtrunA17_Chr1g0168741 29.741 232 118 6 370 588 244 443 6.19e-17 84.0
Msa1091230 MtrunA17_Chr7g0264821 42.647 68 38 1 224 291 4 70 1.59e-13 71.2
Msa1091230 MtrunA17_Chr5g0421601 60.345 58 6 1 152 209 6 46 7.55e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1091230 AT5G47900.3 52.041 294 111 5 1 292 5 270 2.03e-99 305
Msa1091230 AT5G47900.5 51.178 297 112 5 1 292 5 273 2.46e-98 302
Msa1091230 AT5G47900.2 49.840 313 124 5 1 308 5 289 2.44e-97 302
Msa1091230 AT5G47900.8 49.840 313 124 5 1 308 5 289 8.01e-97 302
Msa1091230 AT5G47900.7 49.840 313 124 5 1 308 5 289 1.59e-96 303
Msa1091230 AT5G47900.4 50.323 310 121 5 4 308 2 283 3.63e-96 301
Msa1091230 AT5G47900.9 49.840 313 124 5 1 308 5 289 3.79e-96 302
Msa1091230 AT5G47900.1 49.840 313 124 5 1 308 5 289 3.79e-96 302
Msa1091230 AT5G47900.10 58.696 230 90 2 84 308 1 230 1.61e-84 270
Msa1091230 AT5G27730.4 51.528 229 106 3 69 292 36 264 7.12e-71 233
Msa1091230 AT5G27730.3 51.528 229 106 3 69 292 36 264 3.86e-70 232
Msa1091230 AT5G27730.1 51.528 229 106 3 69 292 36 264 1.45e-68 231
Msa1091230 AT5G47900.6 55.056 178 75 2 136 308 12 189 3.30e-53 186
Msa1091230 AT5G27730.5 42.857 175 95 3 123 292 9 183 1.13e-36 139
Msa1091230 AT5G27730.2 43.529 170 91 3 128 292 14 183 2.09e-35 138
Msa1091230 AT5G60980.2 38.735 253 129 5 307 559 172 398 5.18e-32 129
Msa1091230 AT5G60980.3 38.735 253 129 5 307 559 172 398 5.18e-32 129
Msa1091230 AT5G60980.4 38.340 253 129 6 307 559 172 397 9.40e-30 123
Msa1091230 AT5G60980.1 38.340 253 129 6 307 559 172 397 9.40e-30 123
Msa1091230 AT5G47900.11 49.524 105 49 1 208 308 1 105 1.41e-29 118
Msa1091230 AT5G48650.1 35.169 236 113 5 353 570 217 430 1.99e-26 113
Msa1091230 AT3G25150.1 32.971 276 118 9 311 570 181 405 5.84e-25 109
Msa1091230 AT3G25150.2 32.971 276 118 9 311 570 280 504 1.03e-24 109
Msa1091230 AT2G03640.2 34.810 158 99 2 425 578 248 405 1.79e-18 88.6
Msa1091230 AT2G03640.5 34.810 158 99 2 425 578 247 404 2.03e-18 88.6
Msa1091230 AT2G03640.1 34.810 158 99 2 425 578 247 404 2.03e-18 88.6
Msa1091230 AT2G03640.3 34.810 158 99 2 425 578 247 404 2.03e-18 88.6
Msa1091230 AT5G43960.2 33.533 167 96 5 370 529 176 334 1.72e-17 85.5
Msa1091230 AT5G43960.1 33.533 167 96 5 370 529 235 393 2.34e-17 85.5
Msa1091230 AT1G13730.2 29.482 251 136 7 320 559 163 383 1.28e-15 80.1
Msa1091230 AT1G13730.1 29.482 251 136 7 320 559 163 383 1.28e-15 80.1
Msa1091230 AT2G03640.4 32.275 189 93 5 425 578 247 435 3.23e-15 79.0
Msa1091230 AT3G07250.1 41.463 82 47 1 448 529 269 349 2.39e-11 67.4

Find 155 sgRNAs with CRISPR-Local

Find 1094 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAAATTTCGAATGTAAA+TGG 0.177373 7_3:-6559258 None:intergenic
TTACAGCTCTCTGTGAAATT+TGG 0.205026 7_3:+6557356 Msa1091230:CDS
GAAGCAGAGTTTCAGAAATT+TGG 0.209981 7_3:+6559305 Msa1091230:CDS
CAGGCTTCACCTATTGCTAT+TGG 0.217866 7_3:+6560834 Msa1091230:intron
TAAAGTCCCAAAAGGAAATT+TGG 0.227636 7_3:+6558699 Msa1091230:CDS
AGGCTTCACCTATTGCTATT+GGG 0.229861 7_3:+6560835 Msa1091230:intron
CTTCTTCTCTTACTGTTTGT+TGG 0.256603 7_3:-6552726 None:intergenic
TGGAAATTTCGGTGGTGGTC+GGG 0.263013 7_3:+6561640 Msa1091230:CDS
AAACATTCTCAGCAACAATT+TGG 0.265731 7_3:-6558444 None:intergenic
TTTCAGTTGGCGGTGGCACC+GGG 0.277271 7_3:+6561552 Msa1091230:intron
TTCGGTGGTGGTCGGGGCTA+TGG 0.280647 7_3:+6561647 Msa1091230:CDS
TATGTTATTGCAAAATATTT+TGG 0.282033 7_3:-6559201 None:intergenic
GCCGGTACCAAATTTCCTTT+TGG 0.283644 7_3:-6558706 None:intergenic
TTCAATGAATAATGCAATTC+AGG 0.292406 7_3:+6559510 Msa1091230:CDS
CGTGAAGATATCGTTAATTC+TGG 0.293626 7_3:+6557385 Msa1091230:CDS
ATCGATGCATACGACTTCTT+TGG 0.299869 7_3:-6558598 None:intergenic
TTCTCATTTGACTGAAAATC+AGG 0.302484 7_3:-6558526 None:intergenic
TGAAGAGAATGATGAAGATT+TGG 0.304060 7_3:+6553008 Msa1091230:CDS
GTTTCAGTTGGCGGTGGCAC+CGG 0.312481 7_3:+6561551 Msa1091230:intron
TTCAGAGGTCGTGGAAATTT+CGG 0.316573 7_3:+6561629 Msa1091230:CDS
CGCGTTAGTGATTTGACGTT+TGG 0.319191 7_3:+6557174 Msa1091230:CDS
ATTTATCTTTGCTTGCTGTA+TGG 0.319433 7_3:+6557678 Msa1091230:CDS
CTCAATGCAGCTTATGATAT+TGG 0.322014 7_3:+6556366 Msa1091230:intron
CATCCAAGTCAGAAATAATA+AGG 0.326652 7_3:+6559346 Msa1091230:CDS
CAGCAGCAGGGATACTGTTT+CGG 0.338179 7_3:+6559463 Msa1091230:intron
GCGCTTAAGCTTCTTGCATT+AGG 0.338601 7_3:+6556744 Msa1091230:CDS
GAATGATGAAGATTTGGAAA+TGG 0.359702 7_3:+6553014 Msa1091230:CDS
CTAGGACCACGACCTCTAAT+AGG 0.360777 7_3:-6561704 None:intergenic
AATGATGAAGATTTGGAAAT+GGG 0.378578 7_3:+6553015 Msa1091230:CDS
TATTCATTGAATTTACTGAT+AGG 0.379005 7_3:-6559498 None:intergenic
TTTATCTTTGCTTGCTGTAT+GGG 0.383070 7_3:+6557679 Msa1091230:CDS
AAATACTATTATTCATGTAT+TGG 0.389635 7_3:+6552653 Msa1091230:five_prime_UTR
GATATCGATACTTTCTCAAA+AGG 0.392446 7_3:-6557414 None:intergenic
CGAGGTGAGTTTCCTATTAG+AGG 0.393112 7_3:+6561692 Msa1091230:CDS
ACAGGCGCCCGTGCATATAT+TGG 0.393241 7_3:-6557989 None:intergenic
CGCCACCTCTTCCTCTCCCT+TGG 0.398041 7_3:-6561748 None:intergenic
CTTGAAGAAACAATGCAATA+TGG 0.399784 7_3:-6552811 None:intergenic
TGGAAGACCTAGGTTTCCTT+CGG 0.401704 7_3:+6561580 Msa1091230:CDS
TGAGCAACCGTAACATTTAA+CGG 0.403267 7_3:-6559278 None:intergenic
TTTGAAGCAGATAAGGTTGA+TGG 0.407438 7_3:+6557203 Msa1091230:CDS
TCGGGGTTGCCAACATTATC+CGG 0.409067 7_3:-6558853 None:intergenic
AACATGTCTGTATTTGATAC+TGG 0.410684 7_3:+6562029 Msa1091230:three_prime_UTR
ACACTCACAGAAAATTTCAT+AGG 0.413861 7_3:-6557753 None:intergenic
TCGGTGGTGGTCGGGGCTAT+GGG 0.418000 7_3:+6561648 Msa1091230:CDS
GGAAATTTCGGTGGTGGTCG+GGG 0.421717 7_3:+6561641 Msa1091230:CDS
CAATGCAATATGGTAGGGTT+AGG 0.428226 7_3:-6552801 None:intergenic
TAATCTTTGTAGCTGAATCA+TGG 0.430117 7_3:-6553059 None:intergenic
ACATGAGAATTCGCGGGGTC+CGG 0.431165 7_3:-6558412 None:intergenic
GTGGAAATTTCGGTGGTGGT+CGG 0.431299 7_3:+6561639 Msa1091230:CDS
TGCTAAAACCACTGAGATCA+TGG 0.436711 7_3:-6561958 None:intergenic
GATCATTCCAACGACATTGC+AGG 0.438809 7_3:-6557927 None:intergenic
ACATTATCCGGTGCTGCATC+AGG 0.444678 7_3:-6558841 None:intergenic
GGCTTCACCTATTGCTATTG+GGG 0.444733 7_3:+6560836 Msa1091230:intron
AAATTTGCCGTTAAATGTTA+CGG 0.446479 7_3:+6559271 Msa1091230:CDS
GAGTGGATTTGAAGCAGATA+AGG 0.447061 7_3:+6557196 Msa1091230:CDS
ATGATCGATCGTAGCTTGTT+GGG 0.449187 7_3:+6557944 Msa1091230:CDS
TGGGATGTACGTTCCCGATT+GGG 0.453793 7_3:+6557698 Msa1091230:CDS
AATGATCGATCGTAGCTTGT+TGG 0.458059 7_3:+6557943 Msa1091230:CDS
GGAAGACCTAGGTTTCCTTC+GGG 0.459157 7_3:+6561581 Msa1091230:CDS
TTACCTTATTATTTCTGACT+TGG 0.460817 7_3:-6559349 None:intergenic
AATCACTTCTCTGTCTCAAA+AGG 0.464912 7_3:+6558570 Msa1091230:CDS
AATTTCATAGGTTCTGAAGA+AGG 0.469705 7_3:-6557741 None:intergenic
AAATGAGAATGATGATTCTC+AGG 0.471569 7_3:+6558540 Msa1091230:CDS
TGCGTTTCATGATGGTTAGA+AGG 0.471847 7_3:-6558472 None:intergenic
TTTCTGACTTGGATGCATCC+TGG 0.473445 7_3:-6559338 None:intergenic
GTCGCATCAACTTTGCAAGA+TGG 0.475648 7_3:-6556702 None:intergenic
TGCAGTGCCTGATGCAGCAC+CGG 0.476092 7_3:+6558834 Msa1091230:CDS
TGAGAAAGTATCGATATCAA+TGG 0.477114 7_3:+6557419 Msa1091230:CDS
TATCACCAAGGGAGAGGAAG+AGG 0.479109 7_3:+6561743 Msa1091230:CDS
CAACTATCTGCGTTTCATGA+TGG 0.483930 7_3:-6558480 None:intergenic
GCCTGCTTTACAGTATTAGT+TGG 0.489014 7_3:-6558766 None:intergenic
TTGCAGGTTAAAGTCCCAAA+AGG 0.489323 7_3:+6558691 Msa1091230:intron
ATGATATTGGTGGATGATGC+TGG 0.492588 7_3:+6556379 Msa1091230:CDS
TTCGCGGGGTCCGGTGGAGA+AGG 0.493478 7_3:-6558403 None:intergenic
TTCTTTCACATGAGAATTCG+CGG 0.493732 7_3:-6558419 None:intergenic
AAGAAACAATGCAATATGGT+AGG 0.494291 7_3:-6552807 None:intergenic
AACATATGAGAAGTCTTTGA+AGG 0.495292 7_3:-6561889 None:intergenic
ATATCGATACTTTCTCAAAA+GGG 0.495414 7_3:-6557413 None:intergenic
GTTGGCACATACACTTTAGC+CGG 0.498098 7_3:-6558724 None:intergenic
ATGGGATGTACGTTCCCGAT+TGG 0.499827 7_3:+6557697 Msa1091230:CDS
GAAGGATCAGCAATGTGAAT+CGG 0.501939 7_3:-6558385 None:intergenic
GGAGAGGAAGAGGTGGCGGC+CGG 0.502292 7_3:+6561753 Msa1091230:CDS
GGTTCTGAAGAAGGTTCTGT+TGG 0.504371 7_3:-6557732 None:intergenic
AAATGTTACGGTTGCTCAGT+TGG 0.504697 7_3:+6559283 Msa1091230:CDS
AGCAATCGTTGAGAAGTTTG+AGG 0.505791 7_3:-6553168 None:intergenic
TGGAACTTCATACTCCCAAT+CGG 0.507436 7_3:-6557712 None:intergenic
TGGGTTTACAACATCTATAC+CGG 0.509722 7_3:+6557963 Msa1091230:CDS
CAAAGTTGATGCGACTAGAA+AGG 0.510229 7_3:+6556710 Msa1091230:CDS
GCTATTGTTAAACCATTCCA+TGG 0.518565 7_3:-6556430 None:intergenic
CTCAATCATTCTCCATGGAA+TGG 0.518820 7_3:+6556418 Msa1091230:CDS
TTTCGAAATGATTCATTCAG+AGG 0.521602 7_3:+6561614 Msa1091230:CDS
TTTCAAATTACCTCGGGCAG+TGG 0.524229 7_3:-6560889 None:intergenic
GGTCCTAGTGGACGTGGAGA+AGG 0.529839 7_3:+6561719 Msa1091230:CDS
AAATTTGGACCGATCAAGCC+AGG 0.530806 7_3:+6559320 Msa1091230:CDS
TGCACTAGCATTCACATACA+AGG 0.532824 7_3:+6556492 Msa1091230:CDS
TGGATGCATCCTGGCTTGAT+CGG 0.535677 7_3:-6559329 None:intergenic
AGGTTTCCTTCGGGAAGAAG+TGG 0.536808 7_3:+6561590 Msa1091230:CDS
TCAGTTGGCGGTGGCACCGG+GGG 0.537253 7_3:+6561554 Msa1091230:intron
GCCAACTAATACTGTAAAGC+AGG 0.538243 7_3:+6558765 Msa1091230:CDS
AATGATTCATTCAGAGGTCG+TGG 0.539211 7_3:+6561620 Msa1091230:CDS
CGAAATCCACTTCTTCCCGA+AGG 0.539572 7_3:-6561596 None:intergenic
TGACTGAAAATCAGGTTCTA+CGG 0.540434 7_3:-6558518 None:intergenic
TTCAGTTGGCGGTGGCACCG+GGG 0.541103 7_3:+6561553 Msa1091230:intron
CAAGGGAGAGGAAGAGGTGG+CGG 0.542822 7_3:+6561749 Msa1091230:CDS
GAAGGTTATCACCAAGGGAG+AGG 0.543577 7_3:+6561737 Msa1091230:CDS
CATTGCTGATCCTTCTCCAC+CGG 0.544130 7_3:+6558393 Msa1091230:CDS
GAAACTCACCTCGGTTTCCA+TGG 0.544875 7_3:-6561682 None:intergenic
TTTGTTTGAATACACTAGAC+CGG 0.547856 7_3:-6561772 None:intergenic
GAGTTTCCTATTAGAGGTCG+TGG 0.548261 7_3:+6561698 Msa1091230:CDS
CTTCTTCCCGAAGGAAACCT+AGG 0.549762 7_3:-6561587 None:intergenic
TCTTTCACATGAGAATTCGC+GGG 0.549865 7_3:-6558418 None:intergenic
CATGGAGAATGATTGAGTGC+TGG 0.551745 7_3:-6556412 None:intergenic
GGTCGTGGAAATTTCGGTGG+TGG 0.554086 7_3:+6561635 Msa1091230:CDS
AAGGTTGATGGGAATACTGC+AGG 0.554486 7_3:+6557215 Msa1091230:CDS
TAACCTTCTCCACGTCCACT+AGG 0.554942 7_3:-6561722 None:intergenic
GGACCAGCCTGCAATGTCGT+TGG 0.555369 7_3:+6557920 Msa1091230:CDS
CCCAAAAGGAAATTTGGTAC+CGG 0.558103 7_3:+6558705 Msa1091230:CDS
TTGAAGCAGATAAGGTTGAT+GGG 0.558495 7_3:+6557204 Msa1091230:CDS
TAGTGATTTGACGTTTGGAG+TGG 0.558670 7_3:+6557179 Msa1091230:CDS
TGTGGAGTAAGAGGCGACAC+TGG 0.561390 7_3:+6557899 Msa1091230:CDS
TGAGAATTCGCGGGGTCCGG+TGG 0.567098 7_3:-6558409 None:intergenic
TAGGTTAAATGTGGAGTAAG+AGG 0.567721 7_3:+6557890 Msa1091230:intron
TTTGCTGTTTCAGTTGGCGG+TGG 0.568996 7_3:+6561545 Msa1091230:intron
GGAACTTCATACTCCCAATC+GGG 0.571048 7_3:-6557711 None:intergenic
AGAAACAATGCAATATGGTA+GGG 0.578188 7_3:-6552806 None:intergenic
CAGCACTCAATCATTCTCCA+TGG 0.586892 7_3:+6556413 Msa1091230:CDS
GGTCGTGGTCCTAGTGGACG+TGG 0.588716 7_3:+6561713 Msa1091230:CDS
CCCGTGCATATATTGGTCTC+CGG 0.589463 7_3:-6557982 None:intergenic
AATGCAGCTTATGATATTGG+TGG 0.594795 7_3:+6556369 Msa1091230:intron
ATTCCAACGACATTGCAGGC+TGG 0.596770 7_3:-6557923 None:intergenic
GTTATTTGCCATGATCTCAG+TGG 0.601128 7_3:+6561950 Msa1091230:three_prime_UTR
GCTTCACCTATTGCTATTGG+GGG 0.602708 7_3:+6560837 Msa1091230:CDS
ATTAGAGGTCGTGGTCCTAG+TGG 0.604114 7_3:+6561707 Msa1091230:CDS
CCTAGGTCTTCCAATACCCC+CGG 0.610120 7_3:-6561570 None:intergenic
GTGGAGAAGGTTATCACCAA+GGG 0.612859 7_3:+6561732 Msa1091230:CDS
ACATATGAGAAGTCTTTGAA+GGG 0.620044 7_3:-6561888 None:intergenic
ACCGGAGACCAATATATGCA+CGG 0.621670 7_3:+6557981 Msa1091230:CDS
CTTTCACATGAGAATTCGCG+GGG 0.624026 7_3:-6558417 None:intergenic
CCGGAGACCAATATATGCAC+GGG 0.629013 7_3:+6557982 Msa1091230:CDS
CTATAAAACTGTGAAAACAA+AGG 0.631948 7_3:+6552695 Msa1091230:five_prime_UTR
ATGTATATAGTAGTAGATGG+TGG 0.632879 7_3:+6552927 Msa1091230:intron
AACATGTGTTAGGTTAAATG+TGG 0.637640 7_3:+6557881 Msa1091230:intron
AGAGGTCGTGGAAATTTCGG+TGG 0.637954 7_3:+6561632 Msa1091230:CDS
TGTCTGTCTTTGCAGCAGCA+GGG 0.641292 7_3:+6559451 Msa1091230:intron
CTTCACCTATTGCTATTGGG+GGG 0.642869 7_3:+6560838 Msa1091230:CDS
CACCAAGGGAGAGGAAGAGG+TGG 0.647559 7_3:+6561746 Msa1091230:CDS
TCATTGGATGCAGAGAATTG+CGG 0.648931 7_3:+6557321 Msa1091230:intron
ATAAAGAGAACCACTGCCCG+AGG 0.654446 7_3:+6560879 Msa1091230:CDS
CGTGGAGAAGGTTATCACCA+AGG 0.656146 7_3:+6561731 Msa1091230:CDS
AACAATGACCATGGAAACCG+AGG 0.662335 7_3:+6561674 Msa1091230:CDS
TATGAGAAGTCTTTGAAGGG+TGG 0.662376 7_3:-6561885 None:intergenic
CTCTAATAGGAAACTCACCT+CGG 0.674552 7_3:-6561691 None:intergenic
TATGGGCGAAACAATGACCA+TGG 0.679339 7_3:+6561665 Msa1091230:CDS
AGTTGATGCGACTAGAAAGG+CGG 0.689224 7_3:+6556713 Msa1091230:CDS
ATATTGGTGGATGATGCTGG+TGG 0.716550 7_3:+6556382 Msa1091230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATATTAAAAAATATAG+AGG - chr7_3:6554177-6554196 None:intergenic 10.0%
!! AAAATTATAAAACAAGAAAT+AGG - chr7_3:6554487-6554506 None:intergenic 10.0%
!!! AAAATAGAACAATATTTTTT+TGG - chr7_3:6554589-6554608 None:intergenic 10.0%
!! TTTATTATATGATGATAAAA+AGG + chr7_3:6555074-6555093 Msa1091230:intron 10.0%
!! ATATGATAATATTACATATT+TGG - chr7_3:6555306-6555325 None:intergenic 10.0%
!!! AATATATTTTTATTTTTGGT+AGG + chr7_3:6555355-6555374 Msa1091230:intron 10.0%
!!! AAATTCTTAATTTTCTTTTT+TGG + chr7_3:6561029-6561048 Msa1091230:intron 10.0%
!!! AAAATAACCTTTTATATAAT+CGG + chr7_3:6561470-6561489 Msa1091230:intron 10.0%
!! GAAAATATTAAAAAATATAG+AGG - chr7_3:6554177-6554196 None:intergenic 10.0%
!! AAAATTATAAAACAAGAAAT+AGG - chr7_3:6554487-6554506 None:intergenic 10.0%
!!! AAAATAGAACAATATTTTTT+TGG - chr7_3:6554589-6554608 None:intergenic 10.0%
!! TTTATTATATGATGATAAAA+AGG + chr7_3:6555074-6555093 Msa1091230:intron 10.0%
!! ATATGATAATATTACATATT+TGG - chr7_3:6555306-6555325 None:intergenic 10.0%
!!! AATATATTTTTATTTTTGGT+AGG + chr7_3:6555355-6555374 Msa1091230:intron 10.0%
!!! AAATTCTTAATTTTCTTTTT+TGG + chr7_3:6561029-6561048 Msa1091230:intron 10.0%
!!! AAAATAACCTTTTATATAAT+CGG + chr7_3:6561470-6561489 Msa1091230:intron 10.0%
!! AAATACTATTATTCATGTAT+TGG + chr7_3:6552653-6552672 Msa1091230:five_prime_UTR 15.0%
!! TTAGTGATGATTAATAAAAT+GGG + chr7_3:6553715-6553734 Msa1091230:intron 15.0%
!! AACCAAAAAATGTTATTAAT+TGG + chr7_3:6554099-6554118 Msa1091230:intron 15.0%
!!! TTCCAATTAATAACATTTTT+TGG - chr7_3:6554104-6554123 None:intergenic 15.0%
!!! ATATTGTGAAATTTTTTCAA+TGG - chr7_3:6554374-6554393 None:intergenic 15.0%
!! TAAGGAAACATATTTATTAT+TGG - chr7_3:6554518-6554537 None:intergenic 15.0%
!!! TTTTTCTGAAAAATTACTAA+GGG - chr7_3:6554661-6554680 None:intergenic 15.0%
!!! TTTTTTCTGAAAAATTACTA+AGG - chr7_3:6554662-6554681 None:intergenic 15.0%
!!! TCATTTTCTAAAATTATTAC+TGG + chr7_3:6555438-6555457 Msa1091230:intron 15.0%
!! GGTAAAGTTTATTTAATAAA+TGG + chr7_3:6556023-6556042 Msa1091230:intron 15.0%
!!! TCATTCTTTATTTATTTCAT+TGG + chr7_3:6557305-6557324 Msa1091230:intron 15.0%
!!! GAATTTTAGTTTCTTAATAT+AGG + chr7_3:6557461-6557480 Msa1091230:intron 15.0%
!!! CAATTTAACTTCTTATATAT+TGG + chr7_3:6557830-6557849 Msa1091230:intron 15.0%
!!! TTTTTTATCTAGAAAAGTTT+AGG + chr7_3:6558933-6558952 Msa1091230:intron 15.0%
!!! TATGTTATTGCAAAATATTT+TGG - chr7_3:6559204-6559223 None:intergenic 15.0%
!! TGATTAACTACTAAAATTAT+AGG - chr7_3:6559566-6559585 None:intergenic 15.0%
!!! ATGATATTTTCTAAAGTATA+AGG + chr7_3:6559723-6559742 Msa1091230:intron 15.0%
!! ACAAAATATAAAGATATTTC+AGG - chr7_3:6559773-6559792 None:intergenic 15.0%
!!! AAATAACATAATTTTGGTTT+TGG + chr7_3:6559933-6559952 Msa1091230:intron 15.0%
!!! GTCTTTTGTAAATAATTTTT+TGG - chr7_3:6560479-6560498 None:intergenic 15.0%
!!! GAAACTTTTTTTTTTTAGAA+CGG + chr7_3:6560961-6560980 Msa1091230:intron 15.0%
!! AATAAAATTGTTAACTTTCA+TGG - chr7_3:6561527-6561546 None:intergenic 15.0%
!!! ATATACTCTTTTTTTTAAGA+TGG + chr7_3:6561998-6562017 Msa1091230:three_prime_UTR 15.0%
!! AAATACTATTATTCATGTAT+TGG + chr7_3:6552653-6552672 Msa1091230:five_prime_UTR 15.0%
!! TTAGTGATGATTAATAAAAT+GGG + chr7_3:6553715-6553734 Msa1091230:intron 15.0%
!! AACCAAAAAATGTTATTAAT+TGG + chr7_3:6554099-6554118 Msa1091230:intron 15.0%
!!! TTCCAATTAATAACATTTTT+TGG - chr7_3:6554104-6554123 None:intergenic 15.0%
!!! ATATTGTGAAATTTTTTCAA+TGG - chr7_3:6554374-6554393 None:intergenic 15.0%
!! TAAGGAAACATATTTATTAT+TGG - chr7_3:6554518-6554537 None:intergenic 15.0%
!!! TTTTTCTGAAAAATTACTAA+GGG - chr7_3:6554661-6554680 None:intergenic 15.0%
!!! TTTTTTCTGAAAAATTACTA+AGG - chr7_3:6554662-6554681 None:intergenic 15.0%
!!! TCATTTTCTAAAATTATTAC+TGG + chr7_3:6555438-6555457 Msa1091230:intron 15.0%
!! GGTAAAGTTTATTTAATAAA+TGG + chr7_3:6556023-6556042 Msa1091230:intron 15.0%
!!! TCATTCTTTATTTATTTCAT+TGG + chr7_3:6557305-6557324 Msa1091230:intron 15.0%
!!! GAATTTTAGTTTCTTAATAT+AGG + chr7_3:6557461-6557480 Msa1091230:intron 15.0%
!!! CAATTTAACTTCTTATATAT+TGG + chr7_3:6557830-6557849 Msa1091230:intron 15.0%
!!! TTTTTTATCTAGAAAAGTTT+AGG + chr7_3:6558933-6558952 Msa1091230:intron 15.0%
!!! TATGTTATTGCAAAATATTT+TGG - chr7_3:6559204-6559223 None:intergenic 15.0%
!! TGATTAACTACTAAAATTAT+AGG - chr7_3:6559566-6559585 None:intergenic 15.0%
!!! ATGATATTTTCTAAAGTATA+AGG + chr7_3:6559723-6559742 Msa1091230:intron 15.0%
!! ACAAAATATAAAGATATTTC+AGG - chr7_3:6559773-6559792 None:intergenic 15.0%
!!! AAATAACATAATTTTGGTTT+TGG + chr7_3:6559933-6559952 Msa1091230:intron 15.0%
!!! GTCTTTTGTAAATAATTTTT+TGG - chr7_3:6560479-6560498 None:intergenic 15.0%
!!! GAAACTTTTTTTTTTTAGAA+CGG + chr7_3:6560961-6560980 Msa1091230:intron 15.0%
!! AATAAAATTGTTAACTTTCA+TGG - chr7_3:6561527-6561546 None:intergenic 15.0%
!!! ATATACTCTTTTTTTTAAGA+TGG + chr7_3:6561998-6562017 Msa1091230:three_prime_UTR 15.0%
!! AACTAAAAAGAAGCAAAATA+AGG - chr7_3:6553246-6553265 None:intergenic 20.0%
!! ACTATTATCACTAAAAAACT+TGG - chr7_3:6553440-6553459 None:intergenic 20.0%
!! GTAGTAACATACAATAAATA+AGG + chr7_3:6553475-6553494 Msa1091230:intron 20.0%
!! TTATAGTTATTGGGTTTATT+AGG + chr7_3:6553663-6553682 Msa1091230:intron 20.0%
!!! TAGTTATTGCTAAATTTTGA+TGG + chr7_3:6553692-6553711 Msa1091230:intron 20.0%
!! GTTAGTGATGATTAATAAAA+TGG + chr7_3:6553714-6553733 Msa1091230:intron 20.0%
!! TAGTGATGATTAATAAAATG+GGG + chr7_3:6553716-6553735 Msa1091230:intron 20.0%
!! TTCTTGAGATTTAATAGATT+TGG + chr7_3:6553776-6553795 Msa1091230:intron 20.0%
!!! TATTTTTGCTCAATGATAAT+GGG + chr7_3:6554220-6554239 Msa1091230:intron 20.0%
!! GAATTGTTAAACAAAAACTA+AGG - chr7_3:6554536-6554555 None:intergenic 20.0%
!! AAAATTATACAACAAAAACC+AGG - chr7_3:6554558-6554577 None:intergenic 20.0%
!!! CGTATAACTAGATATTTTTT+AGG + chr7_3:6554791-6554810 Msa1091230:intron 20.0%
!!! AACACTAGACATTTTTTATA+TGG + chr7_3:6554924-6554943 Msa1091230:intron 20.0%
!!! CATTTACAATAGTTTTTTGT+GGG - chr7_3:6555021-6555040 None:intergenic 20.0%
!!! AAAACTATTGTAAATGGATT+AGG + chr7_3:6555025-6555044 Msa1091230:intron 20.0%
!! CATACATCATTATCAAAAAA+AGG + chr7_3:6555114-6555133 Msa1091230:intron 20.0%
!! ATAGTAAAATGATATCATGA+AGG - chr7_3:6555269-6555288 None:intergenic 20.0%
!! ATTGGAAAATATAACATGAT+TGG - chr7_3:6555741-6555760 None:intergenic 20.0%
!!! ATCATGTTATATTTTCCAAT+TGG + chr7_3:6555741-6555760 Msa1091230:intron 20.0%
!! AAATATCAGTTAATTCCAAT+TGG - chr7_3:6555759-6555778 None:intergenic 20.0%
!!! TATTTGTCTTGTTTAAACTT+TGG + chr7_3:6555814-6555833 Msa1091230:intron 20.0%
!! GTAATTGAATTGAATGTAAT+AGG + chr7_3:6556048-6556067 Msa1091230:intron 20.0%
!! ATTTCATTTATTATTTGCCT+AGG - chr7_3:6556234-6556253 None:intergenic 20.0%
!! TAACTTATGATACTAATTGA+TGG + chr7_3:6556268-6556287 Msa1091230:intron 20.0%
!! AACTTATGATACTAATTGAT+GGG + chr7_3:6556269-6556288 Msa1091230:intron 20.0%
!! CCAACAATAAAAAGAAAAAA+CGG - chr7_3:6556469-6556488 None:intergenic 20.0%
!! ATATAGATCAAAGAATTCAA+AGG - chr7_3:6556584-6556603 None:intergenic 20.0%
!! TATCACAAAATTTAAGCAAA+AGG - chr7_3:6556796-6556815 None:intergenic 20.0%
!! ATGAATTTAAACTTCCAAAT+AGG - chr7_3:6557801-6557820 None:intergenic 20.0%
!! TTACATATTACTAACAAACA+TGG + chr7_3:6559025-6559044 Msa1091230:intron 20.0%
!! TATTCATTGAATTTACTGAT+AGG - chr7_3:6559501-6559520 None:intergenic 20.0%
!! ACTAAAATTATAGGAATCTA+AGG - chr7_3:6559557-6559576 None:intergenic 20.0%
!!! AGTCACATATATTTTTATGT+TGG + chr7_3:6559590-6559609 Msa1091230:intron 20.0%
!! AAAGAAAAAGAAACTTGTAT+TGG + chr7_3:6559811-6559830 Msa1091230:intron 20.0%
!! ATTATTCTTTAGACAATTGT+TGG + chr7_3:6560026-6560045 Msa1091230:intron 20.0%
!!! TAGTGTATTTTATCCTTTTT+TGG + chr7_3:6560128-6560147 Msa1091230:intron 20.0%
!! AGTTCTATTGTATATGTTAA+GGG - chr7_3:6560197-6560216 None:intergenic 20.0%
!! TTTGTAGTTTGATAGATTAA+GGG - chr7_3:6560362-6560381 None:intergenic 20.0%
!!! TTTTGTAGTTTGATAGATTA+AGG - chr7_3:6560363-6560382 None:intergenic 20.0%
!!! TAATTTTCTTTTTTGGACAA+AGG + chr7_3:6561036-6561055 Msa1091230:intron 20.0%
!!! AATTTTCTTTTTTGGACAAA+GGG + chr7_3:6561037-6561056 Msa1091230:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + chr7_3:6561316-6561335 Msa1091230:intron 20.0%
!!! TTTGTTACCGATTATATAAA+AGG - chr7_3:6561480-6561499 None:intergenic 20.0%
!! AAAACTTTCGAAAAATCATT+CGG - chr7_3:6561810-6561829 None:intergenic 20.0%
!! AACTAAAAAGAAGCAAAATA+AGG - chr7_3:6553246-6553265 None:intergenic 20.0%
!! ACTATTATCACTAAAAAACT+TGG - chr7_3:6553440-6553459 None:intergenic 20.0%
!! GTAGTAACATACAATAAATA+AGG + chr7_3:6553475-6553494 Msa1091230:intron 20.0%
!! TTATAGTTATTGGGTTTATT+AGG + chr7_3:6553663-6553682 Msa1091230:intron 20.0%
!!! TAGTTATTGCTAAATTTTGA+TGG + chr7_3:6553692-6553711 Msa1091230:intron 20.0%
!! GTTAGTGATGATTAATAAAA+TGG + chr7_3:6553714-6553733 Msa1091230:intron 20.0%
!! TAGTGATGATTAATAAAATG+GGG + chr7_3:6553716-6553735 Msa1091230:intron 20.0%
!! TTCTTGAGATTTAATAGATT+TGG + chr7_3:6553776-6553795 Msa1091230:intron 20.0%
!!! TATTTTTGCTCAATGATAAT+GGG + chr7_3:6554220-6554239 Msa1091230:intron 20.0%
!! GAATTGTTAAACAAAAACTA+AGG - chr7_3:6554536-6554555 None:intergenic 20.0%
!! AAAATTATACAACAAAAACC+AGG - chr7_3:6554558-6554577 None:intergenic 20.0%
!!! CGTATAACTAGATATTTTTT+AGG + chr7_3:6554791-6554810 Msa1091230:intron 20.0%
!!! AACACTAGACATTTTTTATA+TGG + chr7_3:6554924-6554943 Msa1091230:intron 20.0%
!!! CATTTACAATAGTTTTTTGT+GGG - chr7_3:6555021-6555040 None:intergenic 20.0%
!!! AAAACTATTGTAAATGGATT+AGG + chr7_3:6555025-6555044 Msa1091230:intron 20.0%
!! CATACATCATTATCAAAAAA+AGG + chr7_3:6555114-6555133 Msa1091230:intron 20.0%
!! ATAGTAAAATGATATCATGA+AGG - chr7_3:6555269-6555288 None:intergenic 20.0%
!! ATTGGAAAATATAACATGAT+TGG - chr7_3:6555741-6555760 None:intergenic 20.0%
!!! ATCATGTTATATTTTCCAAT+TGG + chr7_3:6555741-6555760 Msa1091230:intron 20.0%
!! AAATATCAGTTAATTCCAAT+TGG - chr7_3:6555759-6555778 None:intergenic 20.0%
!!! TATTTGTCTTGTTTAAACTT+TGG + chr7_3:6555814-6555833 Msa1091230:intron 20.0%
!! GTAATTGAATTGAATGTAAT+AGG + chr7_3:6556048-6556067 Msa1091230:intron 20.0%
!! ATTTCATTTATTATTTGCCT+AGG - chr7_3:6556234-6556253 None:intergenic 20.0%
!! TAACTTATGATACTAATTGA+TGG + chr7_3:6556268-6556287 Msa1091230:intron 20.0%
!! AACTTATGATACTAATTGAT+GGG + chr7_3:6556269-6556288 Msa1091230:intron 20.0%
!! CCAACAATAAAAAGAAAAAA+CGG - chr7_3:6556469-6556488 None:intergenic 20.0%
!! ATATAGATCAAAGAATTCAA+AGG - chr7_3:6556584-6556603 None:intergenic 20.0%
!! TATCACAAAATTTAAGCAAA+AGG - chr7_3:6556796-6556815 None:intergenic 20.0%
!! ATGAATTTAAACTTCCAAAT+AGG - chr7_3:6557801-6557820 None:intergenic 20.0%
!! TTACATATTACTAACAAACA+TGG + chr7_3:6559025-6559044 Msa1091230:intron 20.0%
!! TATTCATTGAATTTACTGAT+AGG - chr7_3:6559501-6559520 None:intergenic 20.0%
!! ACTAAAATTATAGGAATCTA+AGG - chr7_3:6559557-6559576 None:intergenic 20.0%
!!! AGTCACATATATTTTTATGT+TGG + chr7_3:6559590-6559609 Msa1091230:intron 20.0%
!! AAAGAAAAAGAAACTTGTAT+TGG + chr7_3:6559811-6559830 Msa1091230:intron 20.0%
!! ATTATTCTTTAGACAATTGT+TGG + chr7_3:6560026-6560045 Msa1091230:intron 20.0%
!!! TAGTGTATTTTATCCTTTTT+TGG + chr7_3:6560128-6560147 Msa1091230:intron 20.0%
!! AGTTCTATTGTATATGTTAA+GGG - chr7_3:6560197-6560216 None:intergenic 20.0%
!! TTTGTAGTTTGATAGATTAA+GGG - chr7_3:6560362-6560381 None:intergenic 20.0%
!!! TTTTGTAGTTTGATAGATTA+AGG - chr7_3:6560363-6560382 None:intergenic 20.0%
!!! TAATTTTCTTTTTTGGACAA+AGG + chr7_3:6561036-6561055 Msa1091230:intron 20.0%
!!! AATTTTCTTTTTTGGACAAA+GGG + chr7_3:6561037-6561056 Msa1091230:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + chr7_3:6561316-6561335 Msa1091230:intron 20.0%
!!! TTTGTTACCGATTATATAAA+AGG - chr7_3:6561480-6561499 None:intergenic 20.0%
!! AAAACTTTCGAAAAATCATT+CGG - chr7_3:6561810-6561829 None:intergenic 20.0%
!!! CTTTGTTTTCACAGTTTTAT+AGG - chr7_3:6552697-6552716 None:intergenic 25.0%
! CTATAAAACTGTGAAAACAA+AGG + chr7_3:6552695-6552714 Msa1091230:five_prime_UTR 25.0%
! TGTATGTATATAGTAGTAGA+TGG + chr7_3:6552924-6552943 Msa1091230:intron 25.0%
! AATGATGAAGATTTGGAAAT+GGG + chr7_3:6553015-6553034 Msa1091230:CDS 25.0%
! AAAAAGAAGCAAAATAAGGA+AGG - chr7_3:6553242-6553261 None:intergenic 25.0%
!!! TTGTTTTTTGTTTCCTTCAT+TGG + chr7_3:6553380-6553399 Msa1091230:intron 25.0%
! AAATAAGGTTTAACTCATGT+TGG + chr7_3:6553490-6553509 Msa1091230:intron 25.0%
! ATAACAATTTGATCACAAAG+AGG - chr7_3:6554026-6554045 None:intergenic 25.0%
!!! AAAATATAGAGGTATCAACT+AGG - chr7_3:6554166-6554185 None:intergenic 25.0%
!!! GTATTTTTGCTCAATGATAA+TGG + chr7_3:6554219-6554238 Msa1091230:intron 25.0%
!!! AGTTTTTGTTTAACAATTCC+TGG + chr7_3:6554537-6554556 Msa1091230:intron 25.0%
! ATTCCTATGAGTAATATCAA+TGG - chr7_3:6554703-6554722 None:intergenic 25.0%
!!! GTTTATCATGCAACTTTTTT+AGG + chr7_3:6554756-6554775 Msa1091230:intron 25.0%
!!! CCATTTACAATAGTTTTTTG+TGG - chr7_3:6555022-6555041 None:intergenic 25.0%
! CCACAAAAAACTATTGTAAA+TGG + chr7_3:6555019-6555038 Msa1091230:intron 25.0%
!! AGTAATCATAATTTTCCATG+AGG + chr7_3:6555559-6555578 Msa1091230:intron 25.0%
!!! TTTTAGCCTTATAGAATGTT+TGG + chr7_3:6555649-6555668 Msa1091230:intron 25.0%
! GAATAGTTGAAGAAAGAAAA+AGG - chr7_3:6555704-6555723 None:intergenic 25.0%
! TAGTTTGAAAACGACAAATT+TGG + chr7_3:6555783-6555802 Msa1091230:intron 25.0%
!!! TGCATCGATAATTTACTTTT+AGG + chr7_3:6555883-6555902 Msa1091230:intron 25.0%
! GGCAAATATTAGTAATTTAG+TGG + chr7_3:6555904-6555923 Msa1091230:intron 25.0%
! ACACTTTCAATCTTAAGTAT+CGG + chr7_3:6556147-6556166 Msa1091230:intron 25.0%
!! GTTCAAACTCTAAAAACATA+TGG - chr7_3:6556177-6556196 None:intergenic 25.0%
! CAGTATAAATCAATGTAAGA+TGG - chr7_3:6556335-6556354 None:intergenic 25.0%
!!! CCGTTTTTTCTTTTTATTGT+TGG + chr7_3:6556466-6556485 Msa1091230:CDS 25.0%
! CAAAATTTAAGCAAAAGGTT+CGG - chr7_3:6556791-6556810 None:intergenic 25.0%
!!! TCTTTTTTTGATGAATGTCA+AGG + chr7_3:6556853-6556872 Msa1091230:intron 25.0%
!! AAGGTGTTAAAGTAAAATGT+TGG + chr7_3:6556872-6556891 Msa1091230:intron 25.0%
!! TTAAAGTAAAATGTTGGTGA+TGG + chr7_3:6556878-6556897 Msa1091230:intron 25.0%
!!! TGTTATTTCACAACATATAC+AGG - chr7_3:6556921-6556940 None:intergenic 25.0%
! AATGCAATACATTACATACA+TGG - chr7_3:6557127-6557146 None:intergenic 25.0%
! ATATCGATACTTTCTCAAAA+GGG - chr7_3:6557416-6557435 None:intergenic 25.0%
!! TTTTTAATATAACAGGGCTT+TGG + chr7_3:6557638-6557657 Msa1091230:intron 25.0%
!! TTTACATTTTCACACCTATT+TGG + chr7_3:6557784-6557803 Msa1091230:intron 25.0%
!! TATTTTGTAATAAACTTGCC+TGG - chr7_3:6558299-6558318 None:intergenic 25.0%
! TCAAAGCTTAAACAAAAACA+GGG - chr7_3:6558657-6558676 None:intergenic 25.0%
! TTCAAAGCTTAAACAAAAAC+AGG - chr7_3:6558658-6558677 None:intergenic 25.0%
!!! ACATTCTTTACAGTTTTAGT+TGG - chr7_3:6558745-6558764 None:intergenic 25.0%
!!! TGTTTTTTGTTTCAACTTGT+GGG + chr7_3:6558904-6558923 Msa1091230:intron 25.0%
! CTAGAAAAGTTTAGGTAAAT+TGG + chr7_3:6558941-6558960 Msa1091230:intron 25.0%
!!! GCACATCTTTTAATTTTTGA+AGG + chr7_3:6559169-6559188 Msa1091230:intron 25.0%
! AAATTTGCCGTTAAATGTTA+CGG + chr7_3:6559271-6559290 Msa1091230:CDS 25.0%
!!! TTACCTTATTATTTCTGACT+TGG - chr7_3:6559352-6559371 None:intergenic 25.0%
! GATTGAAGAAACAACATAAA+GGG - chr7_3:6559403-6559422 None:intergenic 25.0%
! ATTTCCAGAAAAACTTCATT+AGG - chr7_3:6559425-6559444 None:intergenic 25.0%
! TTCAATGAATAATGCAATTC+AGG + chr7_3:6559510-6559529 Msa1091230:CDS 25.0%
! TAAAGTATAAGGATCATATG+TGG + chr7_3:6559734-6559753 Msa1091230:intron 25.0%
!! AACAATGATGCTATTTAACA+TGG + chr7_3:6559843-6559862 Msa1091230:intron 25.0%
!!! TAACATAATTTTGGTTTTGG+TGG + chr7_3:6559936-6559955 Msa1091230:intron 25.0%
! AATAATACTACTTTCTACGA+AGG - chr7_3:6560012-6560031 None:intergenic 25.0%
!! AGTTGAAAGGATTTTATAGA+TGG - chr7_3:6560076-6560095 None:intergenic 25.0%
! ATCTATAAAATCCTTTCAAC+TGG + chr7_3:6560075-6560094 Msa1091230:intron 25.0%
! TCTATAAAATCCTTTCAACT+GGG + chr7_3:6560076-6560095 Msa1091230:intron 25.0%
!!! AGGGAAAAATCATTTTTATC+AGG - chr7_3:6560178-6560197 None:intergenic 25.0%
! GAGTTCTATTGTATATGTTA+AGG - chr7_3:6560198-6560217 None:intergenic 25.0%
!! AAACGAGTAAACAATTGTTT+TGG + chr7_3:6560304-6560323 Msa1091230:intron 25.0%
! ATACAATTATCTTGTTAGTC+AGG + chr7_3:6560506-6560525 Msa1091230:intron 25.0%
! TATTAGTGACAGACATTAAA+AGG + chr7_3:6560534-6560553 Msa1091230:intron 25.0%
! ATTAGTGACAGACATTAAAA+GGG + chr7_3:6560535-6560554 Msa1091230:intron 25.0%
! ATGAATATAAGAAACCATGT+TGG - chr7_3:6560562-6560581 None:intergenic 25.0%
! CAATTATCTAACATAACTGT+TGG + chr7_3:6560621-6560640 Msa1091230:intron 25.0%
! TATAAACTAGAACACAGTAA+AGG - chr7_3:6560662-6560681 None:intergenic 25.0%
!!! TTTTCTCATTTTGTTTCTTC+AGG + chr7_3:6560815-6560834 Msa1091230:intron 25.0%
!! TAGTTAGTTTCAAATTACCT+CGG - chr7_3:6560899-6560918 None:intergenic 25.0%
!!! TGTTTTTGAGTAGCTTTTTT+TGG + chr7_3:6560999-6561018 Msa1091230:intron 25.0%
! ATACTAGAAGAGATAAGATT+AGG + chr7_3:6561138-6561157 Msa1091230:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr7_3:6561312-6561331 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr7_3:6561373-6561392 Msa1091230:intron 25.0%
!! AAATCAGTTGTTATTGACAA+AGG + chr7_3:6561497-6561516 Msa1091230:intron 25.0%
!!! ATTTTATTTGCTGTTTCAGT+TGG + chr7_3:6561539-6561558 Msa1091230:intron 25.0%
!! TTTTAGCAATGATCAGAAAT+AGG + chr7_3:6561973-6561992 Msa1091230:three_prime_UTR 25.0%
!!! CTTTGTTTTCACAGTTTTAT+AGG - chr7_3:6552697-6552716 None:intergenic 25.0%
! CTATAAAACTGTGAAAACAA+AGG + chr7_3:6552695-6552714 Msa1091230:five_prime_UTR 25.0%
! TGTATGTATATAGTAGTAGA+TGG + chr7_3:6552924-6552943 Msa1091230:intron 25.0%
! AATGATGAAGATTTGGAAAT+GGG + chr7_3:6553015-6553034 Msa1091230:CDS 25.0%
! AAAAAGAAGCAAAATAAGGA+AGG - chr7_3:6553242-6553261 None:intergenic 25.0%
!!! TTGTTTTTTGTTTCCTTCAT+TGG + chr7_3:6553380-6553399 Msa1091230:intron 25.0%
! AAATAAGGTTTAACTCATGT+TGG + chr7_3:6553490-6553509 Msa1091230:intron 25.0%
! ATAACAATTTGATCACAAAG+AGG - chr7_3:6554026-6554045 None:intergenic 25.0%
!!! AAAATATAGAGGTATCAACT+AGG - chr7_3:6554166-6554185 None:intergenic 25.0%
!!! GTATTTTTGCTCAATGATAA+TGG + chr7_3:6554219-6554238 Msa1091230:intron 25.0%
!!! AGTTTTTGTTTAACAATTCC+TGG + chr7_3:6554537-6554556 Msa1091230:intron 25.0%
! ATTCCTATGAGTAATATCAA+TGG - chr7_3:6554703-6554722 None:intergenic 25.0%
!!! GTTTATCATGCAACTTTTTT+AGG + chr7_3:6554756-6554775 Msa1091230:intron 25.0%
!!! CCATTTACAATAGTTTTTTG+TGG - chr7_3:6555022-6555041 None:intergenic 25.0%
! CCACAAAAAACTATTGTAAA+TGG + chr7_3:6555019-6555038 Msa1091230:intron 25.0%
!! AGTAATCATAATTTTCCATG+AGG + chr7_3:6555559-6555578 Msa1091230:intron 25.0%
!!! TTTTAGCCTTATAGAATGTT+TGG + chr7_3:6555649-6555668 Msa1091230:intron 25.0%
! GAATAGTTGAAGAAAGAAAA+AGG - chr7_3:6555704-6555723 None:intergenic 25.0%
! TAGTTTGAAAACGACAAATT+TGG + chr7_3:6555783-6555802 Msa1091230:intron 25.0%
!!! TGCATCGATAATTTACTTTT+AGG + chr7_3:6555883-6555902 Msa1091230:intron 25.0%
! GGCAAATATTAGTAATTTAG+TGG + chr7_3:6555904-6555923 Msa1091230:intron 25.0%
! ACACTTTCAATCTTAAGTAT+CGG + chr7_3:6556147-6556166 Msa1091230:intron 25.0%
!! GTTCAAACTCTAAAAACATA+TGG - chr7_3:6556177-6556196 None:intergenic 25.0%
! CAGTATAAATCAATGTAAGA+TGG - chr7_3:6556335-6556354 None:intergenic 25.0%
!!! CCGTTTTTTCTTTTTATTGT+TGG + chr7_3:6556466-6556485 Msa1091230:CDS 25.0%
! CAAAATTTAAGCAAAAGGTT+CGG - chr7_3:6556791-6556810 None:intergenic 25.0%
!!! TCTTTTTTTGATGAATGTCA+AGG + chr7_3:6556853-6556872 Msa1091230:intron 25.0%
!! AAGGTGTTAAAGTAAAATGT+TGG + chr7_3:6556872-6556891 Msa1091230:intron 25.0%
!! TTAAAGTAAAATGTTGGTGA+TGG + chr7_3:6556878-6556897 Msa1091230:intron 25.0%
!!! TGTTATTTCACAACATATAC+AGG - chr7_3:6556921-6556940 None:intergenic 25.0%
! AATGCAATACATTACATACA+TGG - chr7_3:6557127-6557146 None:intergenic 25.0%
! ATATCGATACTTTCTCAAAA+GGG - chr7_3:6557416-6557435 None:intergenic 25.0%
!! TTTTTAATATAACAGGGCTT+TGG + chr7_3:6557638-6557657 Msa1091230:intron 25.0%
!! TTTACATTTTCACACCTATT+TGG + chr7_3:6557784-6557803 Msa1091230:intron 25.0%
!! TATTTTGTAATAAACTTGCC+TGG - chr7_3:6558299-6558318 None:intergenic 25.0%
! TCAAAGCTTAAACAAAAACA+GGG - chr7_3:6558657-6558676 None:intergenic 25.0%
! TTCAAAGCTTAAACAAAAAC+AGG - chr7_3:6558658-6558677 None:intergenic 25.0%
!!! ACATTCTTTACAGTTTTAGT+TGG - chr7_3:6558745-6558764 None:intergenic 25.0%
!!! TGTTTTTTGTTTCAACTTGT+GGG + chr7_3:6558904-6558923 Msa1091230:intron 25.0%
! CTAGAAAAGTTTAGGTAAAT+TGG + chr7_3:6558941-6558960 Msa1091230:intron 25.0%
!!! GCACATCTTTTAATTTTTGA+AGG + chr7_3:6559169-6559188 Msa1091230:intron 25.0%
! AAATTTGCCGTTAAATGTTA+CGG + chr7_3:6559271-6559290 Msa1091230:CDS 25.0%
!!! TTACCTTATTATTTCTGACT+TGG - chr7_3:6559352-6559371 None:intergenic 25.0%
! GATTGAAGAAACAACATAAA+GGG - chr7_3:6559403-6559422 None:intergenic 25.0%
! ATTTCCAGAAAAACTTCATT+AGG - chr7_3:6559425-6559444 None:intergenic 25.0%
! TTCAATGAATAATGCAATTC+AGG + chr7_3:6559510-6559529 Msa1091230:CDS 25.0%
! TAAAGTATAAGGATCATATG+TGG + chr7_3:6559734-6559753 Msa1091230:intron 25.0%
!! AACAATGATGCTATTTAACA+TGG + chr7_3:6559843-6559862 Msa1091230:intron 25.0%
!!! TAACATAATTTTGGTTTTGG+TGG + chr7_3:6559936-6559955 Msa1091230:intron 25.0%
! AATAATACTACTTTCTACGA+AGG - chr7_3:6560012-6560031 None:intergenic 25.0%
!! AGTTGAAAGGATTTTATAGA+TGG - chr7_3:6560076-6560095 None:intergenic 25.0%
! ATCTATAAAATCCTTTCAAC+TGG + chr7_3:6560075-6560094 Msa1091230:intron 25.0%
! TCTATAAAATCCTTTCAACT+GGG + chr7_3:6560076-6560095 Msa1091230:intron 25.0%
!!! AGGGAAAAATCATTTTTATC+AGG - chr7_3:6560178-6560197 None:intergenic 25.0%
! GAGTTCTATTGTATATGTTA+AGG - chr7_3:6560198-6560217 None:intergenic 25.0%
!! AAACGAGTAAACAATTGTTT+TGG + chr7_3:6560304-6560323 Msa1091230:intron 25.0%
! ATACAATTATCTTGTTAGTC+AGG + chr7_3:6560506-6560525 Msa1091230:intron 25.0%
! TATTAGTGACAGACATTAAA+AGG + chr7_3:6560534-6560553 Msa1091230:intron 25.0%
! ATTAGTGACAGACATTAAAA+GGG + chr7_3:6560535-6560554 Msa1091230:intron 25.0%
! ATGAATATAAGAAACCATGT+TGG - chr7_3:6560562-6560581 None:intergenic 25.0%
! CAATTATCTAACATAACTGT+TGG + chr7_3:6560621-6560640 Msa1091230:intron 25.0%
! TATAAACTAGAACACAGTAA+AGG - chr7_3:6560662-6560681 None:intergenic 25.0%
!!! TTTTCTCATTTTGTTTCTTC+AGG + chr7_3:6560815-6560834 Msa1091230:intron 25.0%
!! TAGTTAGTTTCAAATTACCT+CGG - chr7_3:6560899-6560918 None:intergenic 25.0%
!!! TGTTTTTGAGTAGCTTTTTT+TGG + chr7_3:6560999-6561018 Msa1091230:intron 25.0%
! ATACTAGAAGAGATAAGATT+AGG + chr7_3:6561138-6561157 Msa1091230:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr7_3:6561312-6561331 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr7_3:6561373-6561392 Msa1091230:intron 25.0%
!! AAATCAGTTGTTATTGACAA+AGG + chr7_3:6561497-6561516 Msa1091230:intron 25.0%
!!! ATTTTATTTGCTGTTTCAGT+TGG + chr7_3:6561539-6561558 Msa1091230:intron 25.0%
!! TTTTAGCAATGATCAGAAAT+AGG + chr7_3:6561973-6561992 Msa1091230:three_prime_UTR 25.0%
AGAAACAATGCAATATGGTA+GGG - chr7_3:6552809-6552828 None:intergenic 30.0%
AAGAAACAATGCAATATGGT+AGG - chr7_3:6552810-6552829 None:intergenic 30.0%
CTTGAAGAAACAATGCAATA+TGG - chr7_3:6552814-6552833 None:intergenic 30.0%
ATGTATATAGTAGTAGATGG+TGG + chr7_3:6552927-6552946 Msa1091230:intron 30.0%
TGAAGAGAATGATGAAGATT+TGG + chr7_3:6553008-6553027 Msa1091230:CDS 30.0%
GAATGATGAAGATTTGGAAA+TGG + chr7_3:6553014-6553033 Msa1091230:CDS 30.0%
TAATCTTTGTAGCTGAATCA+TGG - chr7_3:6553062-6553081 None:intergenic 30.0%
! TTGTTTCCTTCATTGGATTT+TGG + chr7_3:6553387-6553406 Msa1091230:intron 30.0%
! TGTTTCCTTCATTGGATTTT+GGG + chr7_3:6553388-6553407 Msa1091230:intron 30.0%
ACTAACGATCTTATGAGATA+CGG - chr7_3:6553526-6553545 None:intergenic 30.0%
TCAGATGTAAGTACATAGTT+AGG + chr7_3:6553558-6553577 Msa1091230:intron 30.0%
TAGGTACTTTGTACTTATGT+TGG + chr7_3:6553577-6553596 Msa1091230:intron 30.0%
TCAAGTAGTACCAACAAATT+GGG - chr7_3:6553810-6553829 None:intergenic 30.0%
TAAACGAACTCTACAAAAGA+GGG - chr7_3:6554298-6554317 None:intergenic 30.0%
CAACCATTGATATTACTCAT+AGG + chr7_3:6554697-6554716 Msa1091230:intron 30.0%
CTTTATAAACGAATTTAGCG+CGG + chr7_3:6554856-6554875 Msa1091230:intron 30.0%
TTTATAAACGAATTTAGCGC+GGG + chr7_3:6554857-6554876 Msa1091230:intron 30.0%
AAAACCACCTAATCTTGTTA+GGG - chr7_3:6554972-6554991 None:intergenic 30.0%
TAAAACCACCTAATCTTGTT+AGG - chr7_3:6554973-6554992 None:intergenic 30.0%
! TTTTGTGGGATTGTTAAGTT+GGG - chr7_3:6555007-6555026 None:intergenic 30.0%
! TTTTTGTGGGATTGTTAAGT+TGG - chr7_3:6555008-6555027 None:intergenic 30.0%
! AATGTATTGACACCAACATA+CGG + chr7_3:6555390-6555409 Msa1091230:intron 30.0%
! TTTCCATGAGGAAATGTTTT+AGG + chr7_3:6555571-6555590 Msa1091230:intron 30.0%
!! TTTTAGGTCTAGACATTGTT+TGG + chr7_3:6555587-6555606 Msa1091230:intron 30.0%
TGAAAACGACAAATTTGGTT+AGG + chr7_3:6555788-6555807 Msa1091230:intron 30.0%
TATGTTTGCTTTACACTATG+AGG + chr7_3:6555928-6555947 Msa1091230:intron 30.0%
TGCTATTCATTCTTAGACAA+CGG + chr7_3:6556002-6556021 Msa1091230:intron 30.0%
TCATTTATTATTTGCCTAGG+AGG - chr7_3:6556231-6556250 None:intergenic 30.0%
TTCTGTTCAAGAAACAGATA+AGG - chr7_3:6556681-6556700 None:intergenic 30.0%
TTGTGAAATAACAGCTATAG+CGG + chr7_3:6556928-6556947 Msa1091230:intron 30.0%
TAGTGTATCACAAAACAACA+GGG - chr7_3:6556987-6557006 None:intergenic 30.0%
ATAGTGTATCACAAAACAAC+AGG - chr7_3:6556988-6557007 None:intergenic 30.0%
! AACGAAGTTCTAACTTCATA+GGG - chr7_3:6557253-6557272 None:intergenic 30.0%
GATATCGATACTTTCTCAAA+AGG - chr7_3:6557417-6557436 None:intergenic 30.0%
!! TGAGAAAGTATCGATATCAA+TGG + chr7_3:6557419-6557438 Msa1091230:CDS 30.0%
AAAAGCAACATCACATAACT+AGG - chr7_3:6557564-6557583 None:intergenic 30.0%
!! ATTTATCTTTGCTTGCTGTA+TGG + chr7_3:6557678-6557697 Msa1091230:CDS 30.0%
!! TTTATCTTTGCTTGCTGTAT+GGG + chr7_3:6557679-6557698 Msa1091230:CDS 30.0%
!! AATTTCATAGGTTCTGAAGA+AGG - chr7_3:6557744-6557763 None:intergenic 30.0%
ACACTCACAGAAAATTTCAT+AGG - chr7_3:6557756-6557775 None:intergenic 30.0%
TATCTATCTGAACATGTGTT+AGG + chr7_3:6557871-6557890 Msa1091230:intron 30.0%
AACATGTGTTAGGTTAAATG+TGG + chr7_3:6557881-6557900 Msa1091230:intron 30.0%
!! TCGTTCTGAATGATGTTTTT+AGG + chr7_3:6558195-6558214 Msa1091230:intron 30.0%
GTTCTGTAAAGAAACGTTAT+CGG - chr7_3:6558366-6558385 None:intergenic 30.0%
AAACATTCTCAGCAACAATT+TGG - chr7_3:6558447-6558466 None:intergenic 30.0%
TTCTCATTTGACTGAAAATC+AGG - chr7_3:6558529-6558548 None:intergenic 30.0%
AAATGAGAATGATGATTCTC+AGG + chr7_3:6558540-6558559 Msa1091230:CDS 30.0%
TAAAGTCCCAAAAGGAAATT+TGG + chr7_3:6558699-6558718 Msa1091230:CDS 30.0%
TCAGAACTATCATTACTTTC+GGG - chr7_3:6558874-6558893 None:intergenic 30.0%
CTCAGAACTATCATTACTTT+CGG - chr7_3:6558875-6558894 None:intergenic 30.0%
!!! GTGTTTTTTGTTTCAACTTG+TGG + chr7_3:6558903-6558922 Msa1091230:intron 30.0%
TTTAGGTAAATTGGATTCCT+GGG + chr7_3:6558950-6558969 Msa1091230:intron 30.0%
CATCCAAGTCAGAAATAATA+AGG + chr7_3:6559346-6559365 Msa1091230:CDS 30.0%
GGATTGAAGAAACAACATAA+AGG - chr7_3:6559404-6559423 None:intergenic 30.0%
! CAATCCTAATGAAGTTTTTC+TGG + chr7_3:6559418-6559437 Msa1091230:intron 30.0%
AATTCAGGTATGATCTTCAT+TGG + chr7_3:6559525-6559544 Msa1091230:intron 30.0%
! TTTGAACGCTAATTTCAAGT+TGG + chr7_3:6559626-6559645 Msa1091230:intron 30.0%
! TCTAGAGTAAGAAGAATACA+TGG - chr7_3:6559678-6559697 None:intergenic 30.0%
!!! AGTGCAATTGTTTGTTTTTG+TGG + chr7_3:6559980-6559999 Msa1091230:intron 30.0%
!! CTCGTTTTATTCCAAATAGA+AGG - chr7_3:6560291-6560310 None:intergenic 30.0%
AGATCAAACTGACTAACAAA+AGG - chr7_3:6560401-6560420 None:intergenic 30.0%
TTCATGATGTAATCTTGAGA+TGG + chr7_3:6560577-6560596 Msa1091230:intron 30.0%
AGAACATAGAACATAGCTTA+AGG - chr7_3:6560754-6560773 None:intergenic 30.0%
TGCCTTGAATTATTTGTGTT+TGG + chr7_3:6560773-6560792 Msa1091230:intron 30.0%
GCCTTGAATTATTTGTGTTT+GGG + chr7_3:6560774-6560793 Msa1091230:intron 30.0%
TCCCAAACACAAATAATTCA+AGG - chr7_3:6560778-6560797 None:intergenic 30.0%
ATGAGAAAAAAGACGATGAA+AGG - chr7_3:6560804-6560823 None:intergenic 30.0%
! AGTTAGTTTCAAATTACCTC+GGG - chr7_3:6560898-6560917 None:intergenic 30.0%
ATAACACCATTAGAGAAAGT+TGG + chr7_3:6561162-6561181 Msa1091230:intron 30.0%
TAACACCATTAGAGAAAGTT+GGG + chr7_3:6561163-6561182 Msa1091230:intron 30.0%
TAGCACCTATAGTAGAAAAT+AGG + chr7_3:6561187-6561206 Msa1091230:intron 30.0%
! CTAAGCCTATTTTCTACTAT+AGG - chr7_3:6561195-6561214 None:intergenic 30.0%
CTATAGTAGAAAATAGGCTT+AGG + chr7_3:6561193-6561212 Msa1091230:intron 30.0%
AACTATTAGGAAAGACTTAG+AGG + chr7_3:6561329-6561348 Msa1091230:intron 30.0%
! TAATGAGTTGGATCGAAATA+TGG + chr7_3:6561353-6561372 Msa1091230:intron 30.0%
TTTCGAAATGATTCATTCAG+AGG + chr7_3:6561614-6561633 Msa1091230:CDS 30.0%
TTTGTTTGAATACACTAGAC+CGG - chr7_3:6561775-6561794 None:intergenic 30.0%
!! GATTTTTCGAAAGTTTTCCA+AGG + chr7_3:6561813-6561832 Msa1091230:exon 30.0%
TGTTTGTATCCTACCAAAAA+AGG - chr7_3:6561839-6561858 None:intergenic 30.0%
ACATATGAGAAGTCTTTGAA+GGG - chr7_3:6561891-6561910 None:intergenic 30.0%
AACATATGAGAAGTCTTTGA+AGG - chr7_3:6561892-6561911 None:intergenic 30.0%
AACATGTCTGTATTTGATAC+TGG + chr7_3:6562029-6562048 Msa1091230:three_prime_UTR 30.0%
AGAAACAATGCAATATGGTA+GGG - chr7_3:6552809-6552828 None:intergenic 30.0%
AAGAAACAATGCAATATGGT+AGG - chr7_3:6552810-6552829 None:intergenic 30.0%
CTTGAAGAAACAATGCAATA+TGG - chr7_3:6552814-6552833 None:intergenic 30.0%
ATGTATATAGTAGTAGATGG+TGG + chr7_3:6552927-6552946 Msa1091230:intron 30.0%
TGAAGAGAATGATGAAGATT+TGG + chr7_3:6553008-6553027 Msa1091230:CDS 30.0%
GAATGATGAAGATTTGGAAA+TGG + chr7_3:6553014-6553033 Msa1091230:CDS 30.0%
TAATCTTTGTAGCTGAATCA+TGG - chr7_3:6553062-6553081 None:intergenic 30.0%
! TTGTTTCCTTCATTGGATTT+TGG + chr7_3:6553387-6553406 Msa1091230:intron 30.0%
! TGTTTCCTTCATTGGATTTT+GGG + chr7_3:6553388-6553407 Msa1091230:intron 30.0%
ACTAACGATCTTATGAGATA+CGG - chr7_3:6553526-6553545 None:intergenic 30.0%
TCAGATGTAAGTACATAGTT+AGG + chr7_3:6553558-6553577 Msa1091230:intron 30.0%
TAGGTACTTTGTACTTATGT+TGG + chr7_3:6553577-6553596 Msa1091230:intron 30.0%
TCAAGTAGTACCAACAAATT+GGG - chr7_3:6553810-6553829 None:intergenic 30.0%
TAAACGAACTCTACAAAAGA+GGG - chr7_3:6554298-6554317 None:intergenic 30.0%
CAACCATTGATATTACTCAT+AGG + chr7_3:6554697-6554716 Msa1091230:intron 30.0%
CTTTATAAACGAATTTAGCG+CGG + chr7_3:6554856-6554875 Msa1091230:intron 30.0%
TTTATAAACGAATTTAGCGC+GGG + chr7_3:6554857-6554876 Msa1091230:intron 30.0%
AAAACCACCTAATCTTGTTA+GGG - chr7_3:6554972-6554991 None:intergenic 30.0%
TAAAACCACCTAATCTTGTT+AGG - chr7_3:6554973-6554992 None:intergenic 30.0%
! TTTTGTGGGATTGTTAAGTT+GGG - chr7_3:6555007-6555026 None:intergenic 30.0%
! TTTTTGTGGGATTGTTAAGT+TGG - chr7_3:6555008-6555027 None:intergenic 30.0%
! AATGTATTGACACCAACATA+CGG + chr7_3:6555390-6555409 Msa1091230:intron 30.0%
! TTTCCATGAGGAAATGTTTT+AGG + chr7_3:6555571-6555590 Msa1091230:intron 30.0%
!! TTTTAGGTCTAGACATTGTT+TGG + chr7_3:6555587-6555606 Msa1091230:intron 30.0%
TGAAAACGACAAATTTGGTT+AGG + chr7_3:6555788-6555807 Msa1091230:intron 30.0%
TATGTTTGCTTTACACTATG+AGG + chr7_3:6555928-6555947 Msa1091230:intron 30.0%
TGCTATTCATTCTTAGACAA+CGG + chr7_3:6556002-6556021 Msa1091230:intron 30.0%
TCATTTATTATTTGCCTAGG+AGG - chr7_3:6556231-6556250 None:intergenic 30.0%
TTCTGTTCAAGAAACAGATA+AGG - chr7_3:6556681-6556700 None:intergenic 30.0%
TTGTGAAATAACAGCTATAG+CGG + chr7_3:6556928-6556947 Msa1091230:intron 30.0%
TAGTGTATCACAAAACAACA+GGG - chr7_3:6556987-6557006 None:intergenic 30.0%
ATAGTGTATCACAAAACAAC+AGG - chr7_3:6556988-6557007 None:intergenic 30.0%
! AACGAAGTTCTAACTTCATA+GGG - chr7_3:6557253-6557272 None:intergenic 30.0%
GATATCGATACTTTCTCAAA+AGG - chr7_3:6557417-6557436 None:intergenic 30.0%
!! TGAGAAAGTATCGATATCAA+TGG + chr7_3:6557419-6557438 Msa1091230:CDS 30.0%
AAAAGCAACATCACATAACT+AGG - chr7_3:6557564-6557583 None:intergenic 30.0%
!! ATTTATCTTTGCTTGCTGTA+TGG + chr7_3:6557678-6557697 Msa1091230:CDS 30.0%
!! TTTATCTTTGCTTGCTGTAT+GGG + chr7_3:6557679-6557698 Msa1091230:CDS 30.0%
!! AATTTCATAGGTTCTGAAGA+AGG - chr7_3:6557744-6557763 None:intergenic 30.0%
ACACTCACAGAAAATTTCAT+AGG - chr7_3:6557756-6557775 None:intergenic 30.0%
TATCTATCTGAACATGTGTT+AGG + chr7_3:6557871-6557890 Msa1091230:intron 30.0%
AACATGTGTTAGGTTAAATG+TGG + chr7_3:6557881-6557900 Msa1091230:intron 30.0%
!! TCGTTCTGAATGATGTTTTT+AGG + chr7_3:6558195-6558214 Msa1091230:intron 30.0%
GTTCTGTAAAGAAACGTTAT+CGG - chr7_3:6558366-6558385 None:intergenic 30.0%
AAACATTCTCAGCAACAATT+TGG - chr7_3:6558447-6558466 None:intergenic 30.0%
TTCTCATTTGACTGAAAATC+AGG - chr7_3:6558529-6558548 None:intergenic 30.0%
AAATGAGAATGATGATTCTC+AGG + chr7_3:6558540-6558559 Msa1091230:CDS 30.0%
TAAAGTCCCAAAAGGAAATT+TGG + chr7_3:6558699-6558718 Msa1091230:CDS 30.0%
TCAGAACTATCATTACTTTC+GGG - chr7_3:6558874-6558893 None:intergenic 30.0%
CTCAGAACTATCATTACTTT+CGG - chr7_3:6558875-6558894 None:intergenic 30.0%
!!! GTGTTTTTTGTTTCAACTTG+TGG + chr7_3:6558903-6558922 Msa1091230:intron 30.0%
TTTAGGTAAATTGGATTCCT+GGG + chr7_3:6558950-6558969 Msa1091230:intron 30.0%
CATCCAAGTCAGAAATAATA+AGG + chr7_3:6559346-6559365 Msa1091230:CDS 30.0%
GGATTGAAGAAACAACATAA+AGG - chr7_3:6559404-6559423 None:intergenic 30.0%
! CAATCCTAATGAAGTTTTTC+TGG + chr7_3:6559418-6559437 Msa1091230:intron 30.0%
AATTCAGGTATGATCTTCAT+TGG + chr7_3:6559525-6559544 Msa1091230:intron 30.0%
! TTTGAACGCTAATTTCAAGT+TGG + chr7_3:6559626-6559645 Msa1091230:intron 30.0%
! TCTAGAGTAAGAAGAATACA+TGG - chr7_3:6559678-6559697 None:intergenic 30.0%
!!! AGTGCAATTGTTTGTTTTTG+TGG + chr7_3:6559980-6559999 Msa1091230:intron 30.0%
!! CTCGTTTTATTCCAAATAGA+AGG - chr7_3:6560291-6560310 None:intergenic 30.0%
AGATCAAACTGACTAACAAA+AGG - chr7_3:6560401-6560420 None:intergenic 30.0%
TTCATGATGTAATCTTGAGA+TGG + chr7_3:6560577-6560596 Msa1091230:intron 30.0%
AGAACATAGAACATAGCTTA+AGG - chr7_3:6560754-6560773 None:intergenic 30.0%
TGCCTTGAATTATTTGTGTT+TGG + chr7_3:6560773-6560792 Msa1091230:intron 30.0%
GCCTTGAATTATTTGTGTTT+GGG + chr7_3:6560774-6560793 Msa1091230:intron 30.0%
TCCCAAACACAAATAATTCA+AGG - chr7_3:6560778-6560797 None:intergenic 30.0%
ATGAGAAAAAAGACGATGAA+AGG - chr7_3:6560804-6560823 None:intergenic 30.0%
! AGTTAGTTTCAAATTACCTC+GGG - chr7_3:6560898-6560917 None:intergenic 30.0%
ATAACACCATTAGAGAAAGT+TGG + chr7_3:6561162-6561181 Msa1091230:intron 30.0%
TAACACCATTAGAGAAAGTT+GGG + chr7_3:6561163-6561182 Msa1091230:intron 30.0%
TAGCACCTATAGTAGAAAAT+AGG + chr7_3:6561187-6561206 Msa1091230:intron 30.0%
! CTAAGCCTATTTTCTACTAT+AGG - chr7_3:6561195-6561214 None:intergenic 30.0%
CTATAGTAGAAAATAGGCTT+AGG + chr7_3:6561193-6561212 Msa1091230:intron 30.0%
AACTATTAGGAAAGACTTAG+AGG + chr7_3:6561329-6561348 Msa1091230:intron 30.0%
! TAATGAGTTGGATCGAAATA+TGG + chr7_3:6561353-6561372 Msa1091230:intron 30.0%
TTTCGAAATGATTCATTCAG+AGG + chr7_3:6561614-6561633 Msa1091230:CDS 30.0%
TTTGTTTGAATACACTAGAC+CGG - chr7_3:6561775-6561794 None:intergenic 30.0%
!! GATTTTTCGAAAGTTTTCCA+AGG + chr7_3:6561813-6561832 Msa1091230:exon 30.0%
TGTTTGTATCCTACCAAAAA+AGG - chr7_3:6561839-6561858 None:intergenic 30.0%
ACATATGAGAAGTCTTTGAA+GGG - chr7_3:6561891-6561910 None:intergenic 30.0%
AACATATGAGAAGTCTTTGA+AGG - chr7_3:6561892-6561911 None:intergenic 30.0%
AACATGTCTGTATTTGATAC+TGG + chr7_3:6562029-6562048 Msa1091230:three_prime_UTR 30.0%
CTTCTTCTCTTACTGTTTGT+TGG - chr7_3:6552729-6552748 None:intergenic 35.0%
! CTTTCACTTGATGTTTTTCG+TGG + chr7_3:6553189-6553208 Msa1091230:CDS 35.0%
TTAACTCATGTTGGTCAAGT+TGG + chr7_3:6553499-6553518 Msa1091230:intron 35.0%
GTCAAGTAGTACCAACAAAT+TGG - chr7_3:6553811-6553830 None:intergenic 35.0%
CGTAATGGTATGTAAATGGA+CGG - chr7_3:6553995-6554014 None:intergenic 35.0%
CGTCCATTTACATACCATTA+CGG + chr7_3:6553993-6554012 Msa1091230:intron 35.0%
TAGCCGTAATGGTATGTAAA+TGG - chr7_3:6553999-6554018 None:intergenic 35.0%
!!! AGAGGTATCAACTAGGTTTT+CGG - chr7_3:6554159-6554178 None:intergenic 35.0%
GTAAACGAACTCTACAAAAG+AGG - chr7_3:6554299-6554318 None:intergenic 35.0%
GCTTTGCAGATGACTAATAT+AGG - chr7_3:6554321-6554340 None:intergenic 35.0%
!!! CCATATTCTGTTTTAGTGGA+CGG - chr7_3:6554343-6554362 None:intergenic 35.0%
!! GTAGCCATATTCTGTTTTAG+TGG - chr7_3:6554347-6554366 None:intergenic 35.0%
! TTTGTGGGATTGTTAAGTTG+GGG - chr7_3:6555006-6555025 None:intergenic 35.0%
CTAACCAACTACACGTTATT+AGG - chr7_3:6555143-6555162 None:intergenic 35.0%
!! TCACCATGTTGCTTTATCAA+TGG + chr7_3:6555194-6555213 Msa1091230:intron 35.0%
!! CACCATGTTGCTTTATCAAT+GGG + chr7_3:6555195-6555214 Msa1091230:intron 35.0%
TTCCCATTGATAAAGCAACA+TGG - chr7_3:6555200-6555219 None:intergenic 35.0%
ATGAAGCACGAACACATATA+CGG - chr7_3:6555497-6555516 None:intergenic 35.0%
TGTTAGAAGTTGCATGCAAA+AGG - chr7_3:6555534-6555553 None:intergenic 35.0%
TTGCATGCAACTTCTAACAT+TGG + chr7_3:6555535-6555554 Msa1091230:intron 35.0%
AGACCTAAAACATTTCCTCA+TGG - chr7_3:6555577-6555596 None:intergenic 35.0%
TTATCCATGCCAGTTTCATT+AGG - chr7_3:6555617-6555636 None:intergenic 35.0%
! GAAGCACCAAACATTCTATA+AGG - chr7_3:6555658-6555677 None:intergenic 35.0%
!! GTCTTGTTTAAACTTTGGTC+TGG + chr7_3:6555819-6555838 Msa1091230:intron 35.0%
AACTTTGGTCTGGTGTAATT+TGG + chr7_3:6555829-6555848 Msa1091230:intron 35.0%
!!! GGAGTTTTAAACGTGAAGTT+TGG - chr7_3:6556201-6556220 None:intergenic 35.0%
! CTTCACGTTTAAAACTCCTT+TGG + chr7_3:6556203-6556222 Msa1091230:intron 35.0%
CTCAATGCAGCTTATGATAT+TGG + chr7_3:6556366-6556385 Msa1091230:intron 35.0%
AATGCAGCTTATGATATTGG+TGG + chr7_3:6556369-6556388 Msa1091230:intron 35.0%
GCTATTGTTAAACCATTCCA+TGG - chr7_3:6556433-6556452 None:intergenic 35.0%
! GCATTAGGCATTTTTCTTCA+AGG + chr7_3:6556759-6556778 Msa1091230:CDS 35.0%
! ATTTAAGCAAAAGGTTCGGT+TGG - chr7_3:6556787-6556806 None:intergenic 35.0%
! TTGACGGTTTGTTCAAATTC+CGG - chr7_3:6557067-6557086 None:intergenic 35.0%
CGATCTACGATTGACAAAAT+TGG + chr7_3:6557093-6557112 Msa1091230:intron 35.0%
!! TATTGCATTTTGTCGTTTGC+AGG + chr7_3:6557138-6557157 Msa1091230:intron 35.0%
! TTTGAAGCAGATAAGGTTGA+TGG + chr7_3:6557203-6557222 Msa1091230:CDS 35.0%
! TTGAAGCAGATAAGGTTGAT+GGG + chr7_3:6557204-6557223 Msa1091230:CDS 35.0%
! CAACGAAGTTCTAACTTCAT+AGG - chr7_3:6557254-6557273 None:intergenic 35.0%
TTACAGCTCTCTGTGAAATT+TGG + chr7_3:6557356-6557375 Msa1091230:CDS 35.0%
CGTGAAGATATCGTTAATTC+TGG + chr7_3:6557385-6557404 Msa1091230:CDS 35.0%
GACTTGAGACACAAGTTAAA+GGG - chr7_3:6557587-6557606 None:intergenic 35.0%
TGACTTGAGACACAAGTTAA+AGG - chr7_3:6557588-6557607 None:intergenic 35.0%
!! TTAACTTGTGTCTCAAGTCA+TGG + chr7_3:6557588-6557607 Msa1091230:intron 35.0%
TAGGTTAAATGTGGAGTAAG+AGG + chr7_3:6557890-6557909 Msa1091230:intron 35.0%
TGGGTTTACAACATCTATAC+CGG + chr7_3:6557963-6557982 Msa1091230:CDS 35.0%
! AAGAGTATAGAGGATCATAC+AGG - chr7_3:6558010-6558029 None:intergenic 35.0%
! CAGAACAACTAAGAGTATAG+AGG - chr7_3:6558020-6558039 None:intergenic 35.0%
CAATCATCATTAACTGGATG+TGG - chr7_3:6558248-6558267 None:intergenic 35.0%
CACATCCAGTTAATGATGAT+TGG + chr7_3:6558246-6558265 Msa1091230:intron 35.0%
ATAGGCCAATCATCATTAAC+TGG - chr7_3:6558254-6558273 None:intergenic 35.0%
TTCTTTCACATGAGAATTCG+CGG - chr7_3:6558422-6558441 None:intergenic 35.0%
! TTCTACGGTGTCTTCATTTT+CGG - chr7_3:6558506-6558525 None:intergenic 35.0%
TGACTGAAAATCAGGTTCTA+CGG - chr7_3:6558521-6558540 None:intergenic 35.0%
AATCACTTCTCTGTCTCAAA+AGG + chr7_3:6558570-6558589 Msa1091230:CDS 35.0%
!! GAAGCTTATTAGTTTGTTGC+AGG + chr7_3:6558675-6558694 Msa1091230:intron 35.0%
CAGAACTATCATTACTTTCG+GGG - chr7_3:6558873-6558892 None:intergenic 35.0%
! CGAAAGTAATGATAGTTCTG+AGG + chr7_3:6558873-6558892 Msa1091230:intron 35.0%
!! AGTAATGATAGTTCTGAGGA+AGG + chr7_3:6558877-6558896 Msa1091230:intron 35.0%
GTTTAGGTAAATTGGATTCC+TGG + chr7_3:6558949-6558968 Msa1091230:intron 35.0%
!!! CTTCTGTTTTTAACAGTCGA+GGG + chr7_3:6559230-6559249 Msa1091230:CDS 35.0%
CGGCAAATTTCGAATGTAAA+TGG - chr7_3:6559261-6559280 None:intergenic 35.0%
TGAGCAACCGTAACATTTAA+CGG - chr7_3:6559281-6559300 None:intergenic 35.0%
GAAGCAGAGTTTCAGAAATT+TGG + chr7_3:6559305-6559324 Msa1091230:CDS 35.0%
ATTTCACGATAGAGAGAAAG+TGG + chr7_3:6559882-6559901 Msa1091230:intron 35.0%
!! GTTTTGGTGGATATCATCAT+GGG + chr7_3:6559949-6559968 Msa1091230:intron 35.0%
!!! ATCCTTTTTTGGCTGAAATG+TGG + chr7_3:6560139-6560158 Msa1091230:intron 35.0%
!!! TCCTTTTTTGGCTGAAATGT+GGG + chr7_3:6560140-6560159 Msa1091230:intron 35.0%
! GCACTTTTACTGAAGAGTAA+TGG - chr7_3:6560232-6560251 None:intergenic 35.0%
!!! TTTTGGTTCTTGAATGCATG+AGG + chr7_3:6560321-6560340 Msa1091230:intron 35.0%
CAAAACAGAAGACACTTTCA+AGG - chr7_3:6560454-6560473 None:intergenic 35.0%
!!! CTTGAAAGTGTCTTCTGTTT+TGG + chr7_3:6560452-6560471 Msa1091230:intron 35.0%
TAGAACATAGCTTAAGGACT+TGG - chr7_3:6560748-6560767 None:intergenic 35.0%
AACACCATTAGAGAAAGTTG+GGG + chr7_3:6561164-6561183 Msa1091230:intron 35.0%
TAGTAGAAAATAGGCTTAGG+TGG + chr7_3:6561196-6561215 Msa1091230:intron 35.0%
AGACTTAGAGGTTAATGAGT+TGG + chr7_3:6561341-6561360 Msa1091230:intron 35.0%
!! TTATTTGCTGTTTCAGTTGG+CGG + chr7_3:6561542-6561561 Msa1091230:intron 35.0%
ACTTTCGAAAAATCATTCGG+TGG - chr7_3:6561807-6561826 None:intergenic 35.0%
! AAGTTTTCCAAGGCCTTTTT+TGG + chr7_3:6561823-6561842 Msa1091230:three_prime_UTR 35.0%
CTTCTTCTCTTACTGTTTGT+TGG - chr7_3:6552729-6552748 None:intergenic 35.0%
! CTTTCACTTGATGTTTTTCG+TGG + chr7_3:6553189-6553208 Msa1091230:CDS 35.0%
TTAACTCATGTTGGTCAAGT+TGG + chr7_3:6553499-6553518 Msa1091230:intron 35.0%
GTCAAGTAGTACCAACAAAT+TGG - chr7_3:6553811-6553830 None:intergenic 35.0%
CGTAATGGTATGTAAATGGA+CGG - chr7_3:6553995-6554014 None:intergenic 35.0%
CGTCCATTTACATACCATTA+CGG + chr7_3:6553993-6554012 Msa1091230:intron 35.0%
TAGCCGTAATGGTATGTAAA+TGG - chr7_3:6553999-6554018 None:intergenic 35.0%
!!! AGAGGTATCAACTAGGTTTT+CGG - chr7_3:6554159-6554178 None:intergenic 35.0%
GTAAACGAACTCTACAAAAG+AGG - chr7_3:6554299-6554318 None:intergenic 35.0%
GCTTTGCAGATGACTAATAT+AGG - chr7_3:6554321-6554340 None:intergenic 35.0%
!!! CCATATTCTGTTTTAGTGGA+CGG - chr7_3:6554343-6554362 None:intergenic 35.0%
!! GTAGCCATATTCTGTTTTAG+TGG - chr7_3:6554347-6554366 None:intergenic 35.0%
! TTTGTGGGATTGTTAAGTTG+GGG - chr7_3:6555006-6555025 None:intergenic 35.0%
CTAACCAACTACACGTTATT+AGG - chr7_3:6555143-6555162 None:intergenic 35.0%
!! TCACCATGTTGCTTTATCAA+TGG + chr7_3:6555194-6555213 Msa1091230:intron 35.0%
!! CACCATGTTGCTTTATCAAT+GGG + chr7_3:6555195-6555214 Msa1091230:intron 35.0%
TTCCCATTGATAAAGCAACA+TGG - chr7_3:6555200-6555219 None:intergenic 35.0%
ATGAAGCACGAACACATATA+CGG - chr7_3:6555497-6555516 None:intergenic 35.0%
TGTTAGAAGTTGCATGCAAA+AGG - chr7_3:6555534-6555553 None:intergenic 35.0%
TTGCATGCAACTTCTAACAT+TGG + chr7_3:6555535-6555554 Msa1091230:intron 35.0%
AGACCTAAAACATTTCCTCA+TGG - chr7_3:6555577-6555596 None:intergenic 35.0%
TTATCCATGCCAGTTTCATT+AGG - chr7_3:6555617-6555636 None:intergenic 35.0%
! GAAGCACCAAACATTCTATA+AGG - chr7_3:6555658-6555677 None:intergenic 35.0%
!! GTCTTGTTTAAACTTTGGTC+TGG + chr7_3:6555819-6555838 Msa1091230:intron 35.0%
AACTTTGGTCTGGTGTAATT+TGG + chr7_3:6555829-6555848 Msa1091230:intron 35.0%
!!! GGAGTTTTAAACGTGAAGTT+TGG - chr7_3:6556201-6556220 None:intergenic 35.0%
! CTTCACGTTTAAAACTCCTT+TGG + chr7_3:6556203-6556222 Msa1091230:intron 35.0%
CTCAATGCAGCTTATGATAT+TGG + chr7_3:6556366-6556385 Msa1091230:intron 35.0%
AATGCAGCTTATGATATTGG+TGG + chr7_3:6556369-6556388 Msa1091230:intron 35.0%
GCTATTGTTAAACCATTCCA+TGG - chr7_3:6556433-6556452 None:intergenic 35.0%
! GCATTAGGCATTTTTCTTCA+AGG + chr7_3:6556759-6556778 Msa1091230:CDS 35.0%
! ATTTAAGCAAAAGGTTCGGT+TGG - chr7_3:6556787-6556806 None:intergenic 35.0%
! TTGACGGTTTGTTCAAATTC+CGG - chr7_3:6557067-6557086 None:intergenic 35.0%
CGATCTACGATTGACAAAAT+TGG + chr7_3:6557093-6557112 Msa1091230:intron 35.0%
!! TATTGCATTTTGTCGTTTGC+AGG + chr7_3:6557138-6557157 Msa1091230:intron 35.0%
! TTTGAAGCAGATAAGGTTGA+TGG + chr7_3:6557203-6557222 Msa1091230:CDS 35.0%
! TTGAAGCAGATAAGGTTGAT+GGG + chr7_3:6557204-6557223 Msa1091230:CDS 35.0%
! CAACGAAGTTCTAACTTCAT+AGG - chr7_3:6557254-6557273 None:intergenic 35.0%
TTACAGCTCTCTGTGAAATT+TGG + chr7_3:6557356-6557375 Msa1091230:CDS 35.0%
CGTGAAGATATCGTTAATTC+TGG + chr7_3:6557385-6557404 Msa1091230:CDS 35.0%
GACTTGAGACACAAGTTAAA+GGG - chr7_3:6557587-6557606 None:intergenic 35.0%
TGACTTGAGACACAAGTTAA+AGG - chr7_3:6557588-6557607 None:intergenic 35.0%
!! TTAACTTGTGTCTCAAGTCA+TGG + chr7_3:6557588-6557607 Msa1091230:intron 35.0%
TAGGTTAAATGTGGAGTAAG+AGG + chr7_3:6557890-6557909 Msa1091230:intron 35.0%
TGGGTTTACAACATCTATAC+CGG + chr7_3:6557963-6557982 Msa1091230:CDS 35.0%
! AAGAGTATAGAGGATCATAC+AGG - chr7_3:6558010-6558029 None:intergenic 35.0%
! CAGAACAACTAAGAGTATAG+AGG - chr7_3:6558020-6558039 None:intergenic 35.0%
CAATCATCATTAACTGGATG+TGG - chr7_3:6558248-6558267 None:intergenic 35.0%
CACATCCAGTTAATGATGAT+TGG + chr7_3:6558246-6558265 Msa1091230:intron 35.0%
ATAGGCCAATCATCATTAAC+TGG - chr7_3:6558254-6558273 None:intergenic 35.0%
TTCTTTCACATGAGAATTCG+CGG - chr7_3:6558422-6558441 None:intergenic 35.0%
! TTCTACGGTGTCTTCATTTT+CGG - chr7_3:6558506-6558525 None:intergenic 35.0%
TGACTGAAAATCAGGTTCTA+CGG - chr7_3:6558521-6558540 None:intergenic 35.0%
AATCACTTCTCTGTCTCAAA+AGG + chr7_3:6558570-6558589 Msa1091230:CDS 35.0%
!! GAAGCTTATTAGTTTGTTGC+AGG + chr7_3:6558675-6558694 Msa1091230:intron 35.0%
CAGAACTATCATTACTTTCG+GGG - chr7_3:6558873-6558892 None:intergenic 35.0%
! CGAAAGTAATGATAGTTCTG+AGG + chr7_3:6558873-6558892 Msa1091230:intron 35.0%
!! AGTAATGATAGTTCTGAGGA+AGG + chr7_3:6558877-6558896 Msa1091230:intron 35.0%
GTTTAGGTAAATTGGATTCC+TGG + chr7_3:6558949-6558968 Msa1091230:intron 35.0%
!!! CTTCTGTTTTTAACAGTCGA+GGG + chr7_3:6559230-6559249 Msa1091230:CDS 35.0%
CGGCAAATTTCGAATGTAAA+TGG - chr7_3:6559261-6559280 None:intergenic 35.0%
TGAGCAACCGTAACATTTAA+CGG - chr7_3:6559281-6559300 None:intergenic 35.0%
GAAGCAGAGTTTCAGAAATT+TGG + chr7_3:6559305-6559324 Msa1091230:CDS 35.0%
ATTTCACGATAGAGAGAAAG+TGG + chr7_3:6559882-6559901 Msa1091230:intron 35.0%
!! GTTTTGGTGGATATCATCAT+GGG + chr7_3:6559949-6559968 Msa1091230:intron 35.0%
!!! ATCCTTTTTTGGCTGAAATG+TGG + chr7_3:6560139-6560158 Msa1091230:intron 35.0%
!!! TCCTTTTTTGGCTGAAATGT+GGG + chr7_3:6560140-6560159 Msa1091230:intron 35.0%
! GCACTTTTACTGAAGAGTAA+TGG - chr7_3:6560232-6560251 None:intergenic 35.0%
!!! TTTTGGTTCTTGAATGCATG+AGG + chr7_3:6560321-6560340 Msa1091230:intron 35.0%
CAAAACAGAAGACACTTTCA+AGG - chr7_3:6560454-6560473 None:intergenic 35.0%
!!! CTTGAAAGTGTCTTCTGTTT+TGG + chr7_3:6560452-6560471 Msa1091230:intron 35.0%
TAGAACATAGCTTAAGGACT+TGG - chr7_3:6560748-6560767 None:intergenic 35.0%
AACACCATTAGAGAAAGTTG+GGG + chr7_3:6561164-6561183 Msa1091230:intron 35.0%
TAGTAGAAAATAGGCTTAGG+TGG + chr7_3:6561196-6561215 Msa1091230:intron 35.0%
AGACTTAGAGGTTAATGAGT+TGG + chr7_3:6561341-6561360 Msa1091230:intron 35.0%
!! TTATTTGCTGTTTCAGTTGG+CGG + chr7_3:6561542-6561561 Msa1091230:intron 35.0%
ACTTTCGAAAAATCATTCGG+TGG - chr7_3:6561807-6561826 None:intergenic 35.0%
! AAGTTTTCCAAGGCCTTTTT+TGG + chr7_3:6561823-6561842 Msa1091230:three_prime_UTR 35.0%
CAATGCAATATGGTAGGGTT+AGG - chr7_3:6552804-6552823 None:intergenic 40.0%
AGCAATCGTTGAGAAGTTTG+AGG - chr7_3:6553171-6553190 None:intergenic 40.0%
!! TCCTTCATTGGATTTTGGGT+TGG + chr7_3:6553392-6553411 Msa1091230:intron 40.0%
!!! CCTTCATTGGATTTTGGGTT+GGG + chr7_3:6553393-6553412 Msa1091230:intron 40.0%
!!! ATTGGATTTTGGGTTGGGTT+GGG + chr7_3:6553398-6553417 Msa1091230:intron 40.0%
!! TGATTGACTTGAGAGTGATG+AGG + chr7_3:6553739-6553758 Msa1091230:intron 40.0%
ACTTGAGAGTGATGAGGTAA+AGG + chr7_3:6553745-6553764 Msa1091230:intron 40.0%
CTTGAGAGTGATGAGGTAAA+GGG + chr7_3:6553746-6553765 Msa1091230:intron 40.0%
GGATGCTATACCCAATTTGT+TGG + chr7_3:6553797-6553816 Msa1091230:intron 40.0%
AGAGAATCCAAAGAGTTTGC+AGG + chr7_3:6553836-6553855 Msa1091230:intron 40.0%
CCGTCCACTAAAACAGAATA+TGG + chr7_3:6554340-6554359 Msa1091230:intron 40.0%
GGAAGTGGTGAAACTTAGAT+TGG - chr7_3:6554951-6554970 None:intergenic 40.0%
ACCACTTCCCTAACAAGATT+AGG + chr7_3:6554962-6554981 Msa1091230:intron 40.0%
ACCTAATCTTGTTAGGGAAG+TGG - chr7_3:6554966-6554985 None:intergenic 40.0%
ACTTCCCTAACAAGATTAGG+TGG + chr7_3:6554965-6554984 Msa1091230:intron 40.0%
!! TTGTGGGATTGTTAAGTTGG+GGG - chr7_3:6555005-6555024 None:intergenic 40.0%
GTGTCCTAATAACGTGTAGT+TGG + chr7_3:6555136-6555155 Msa1091230:intron 40.0%
TGATAAAGCAACATGGTGAG+TGG - chr7_3:6555193-6555212 None:intergenic 40.0%
! TTTGGTGTGCCTAATGAAAC+TGG + chr7_3:6555605-6555624 Msa1091230:intron 40.0%
!! AATGTTTGGTGCTTCTCACA+TGG + chr7_3:6555663-6555682 Msa1091230:intron 40.0%
!! ATGTTTGGTGCTTCTCACAT+GGG + chr7_3:6555664-6555683 Msa1091230:intron 40.0%
TGGTCTGGTGTAATTTGGTT+AGG + chr7_3:6555834-6555853 Msa1091230:intron 40.0%
ATTCGTGTCTTTGCATGTAC+CGG - chr7_3:6555962-6555981 None:intergenic 40.0%
!! CTTACGCATAAGTGTTGAGT+TGG + chr7_3:6556111-6556130 Msa1091230:intron 40.0%
! ATGATATTGGTGGATGATGC+TGG + chr7_3:6556379-6556398 Msa1091230:CDS 40.0%
CTCAATCATTCTCCATGGAA+TGG + chr7_3:6556418-6556437 Msa1091230:CDS 40.0%
TGCACTAGCATTCACATACA+AGG + chr7_3:6556492-6556511 Msa1091230:CDS 40.0%
CTAGCATTCACATACAAGGT+TGG + chr7_3:6556496-6556515 Msa1091230:intron 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_3:6556710-6556729 Msa1091230:CDS 40.0%
TCGTAGATCGCGTAAATTGA+CGG - chr7_3:6557083-6557102 None:intergenic 40.0%
TAGTGATTTGACGTTTGGAG+TGG + chr7_3:6557179-6557198 Msa1091230:CDS 40.0%
! GAGTGGATTTGAAGCAGATA+AGG + chr7_3:6557196-6557215 Msa1091230:CDS 40.0%
TCATTGGATGCAGAGAATTG+CGG + chr7_3:6557321-6557340 Msa1091230:intron 40.0%
TGGAACTTCATACTCCCAAT+CGG - chr7_3:6557715-6557734 None:intergenic 40.0%
! AATGATCGATCGTAGCTTGT+TGG + chr7_3:6557943-6557962 Msa1091230:CDS 40.0%
!! ATGATCGATCGTAGCTTGTT+GGG + chr7_3:6557944-6557963 Msa1091230:CDS 40.0%
ACGAAAAAACCGTTGTCTTG+TGG - chr7_3:6558179-6558198 None:intergenic 40.0%
!! TTAACTGGATGTGGTTCTGA+AGG - chr7_3:6558239-6558258 None:intergenic 40.0%
GAGGTTACAGTAACAGCAAT+AGG - chr7_3:6558272-6558291 None:intergenic 40.0%
!! AATAAACTTGCCTGGTTCTG+AGG - chr7_3:6558291-6558310 None:intergenic 40.0%
GAAGGATCAGCAATGTGAAT+CGG - chr7_3:6558388-6558407 None:intergenic 40.0%
TCTTTCACATGAGAATTCGC+GGG - chr7_3:6558421-6558440 None:intergenic 40.0%
TGCGTTTCATGATGGTTAGA+AGG - chr7_3:6558475-6558494 None:intergenic 40.0%
CAACTATCTGCGTTTCATGA+TGG - chr7_3:6558483-6558502 None:intergenic 40.0%
ATCGATGCATACGACTTCTT+TGG - chr7_3:6558601-6558620 None:intergenic 40.0%
GCTTAAACAAAAACAGGGCT+TGG - chr7_3:6558652-6558671 None:intergenic 40.0%
TTGCAGGTTAAAGTCCCAAA+AGG + chr7_3:6558691-6558710 Msa1091230:intron 40.0%
! CCGGTACCAAATTTCCTTTT+GGG - chr7_3:6558708-6558727 None:intergenic 40.0%
CCCAAAAGGAAATTTGGTAC+CGG + chr7_3:6558705-6558724 Msa1091230:CDS 40.0%
GCCAACTAATACTGTAAAGC+AGG + chr7_3:6558765-6558784 Msa1091230:CDS 40.0%
GCCTGCTTTACAGTATTAGT+TGG - chr7_3:6558769-6558788 None:intergenic 40.0%
AACAAACATGGTTCTCACAC+CGG + chr7_3:6559037-6559056 Msa1091230:intron 40.0%
ATTCAAACCTAGGTCCTTGT+GGG + chr7_3:6559067-6559086 Msa1091230:intron 40.0%
GAATTGACTAAGATCCCACA+AGG - chr7_3:6559084-6559103 None:intergenic 40.0%
!!! GCTTCTGTTTTTAACAGTCG+AGG + chr7_3:6559229-6559248 Msa1091230:CDS 40.0%
AAATGTTACGGTTGCTCAGT+TGG + chr7_3:6559283-6559302 Msa1091230:CDS 40.0%
TCAGGTATGATCTTCATTGG+TGG + chr7_3:6559528-6559547 Msa1091230:intron 40.0%
!! GGTTTTGGTGGATATCATCA+TGG + chr7_3:6559948-6559967 Msa1091230:intron 40.0%
TTGTTGGACAGTACACATCT+TGG + chr7_3:6560042-6560061 Msa1091230:intron 40.0%
!!! TGCTTTTTGGCTAGTTGTTC+AGG + chr7_3:6560099-6560118 Msa1091230:intron 40.0%
ACCCACATTTCAGCCAAAAA+AGG - chr7_3:6560144-6560163 None:intergenic 40.0%
TAAGTGCTTAGACATGTCGT+TGG - chr7_3:6560254-6560273 None:intergenic 40.0%
GACATGTCTAAGCACTTAGA+AGG + chr7_3:6560256-6560275 Msa1091230:intron 40.0%
TCTAAGCACTTAGAAGGATG+CGG + chr7_3:6560262-6560281 Msa1091230:intron 40.0%
GACTAACAAAAGGCGACTTT+AGG - chr7_3:6560391-6560410 None:intergenic 40.0%
GACATTAAAAGGGACCAACA+TGG + chr7_3:6560545-6560564 Msa1091230:intron 40.0%
CATAGCTTAAGGACTTGGAA+TGG - chr7_3:6560743-6560762 None:intergenic 40.0%
! AGGCTTCACCTATTGCTATT+GGG + chr7_3:6560835-6560854 Msa1091230:intron 40.0%
AATGATTCATTCAGAGGTCG+TGG + chr7_3:6561620-6561639 Msa1091230:CDS 40.0%
TTCAGAGGTCGTGGAAATTT+CGG + chr7_3:6561629-6561648 Msa1091230:CDS 40.0%
CTCTAATAGGAAACTCACCT+CGG - chr7_3:6561694-6561713 None:intergenic 40.0%
! AAAAATCATTCGGTGGCAAC+GGG - chr7_3:6561800-6561819 None:intergenic 40.0%
! GAAAAATCATTCGGTGGCAA+CGG - chr7_3:6561801-6561820 None:intergenic 40.0%
!!! TTTCCAAGGCCTTTTTTGGT+AGG + chr7_3:6561827-6561846 Msa1091230:three_prime_UTR 40.0%
TATCCTACCAAAAAAGGCCT+TGG - chr7_3:6561833-6561852 None:intergenic 40.0%
! TATGAGAAGTCTTTGAAGGG+TGG - chr7_3:6561888-6561907 None:intergenic 40.0%
GTTATTTGCCATGATCTCAG+TGG + chr7_3:6561950-6561969 Msa1091230:three_prime_UTR 40.0%
TGCTAAAACCACTGAGATCA+TGG - chr7_3:6561961-6561980 None:intergenic 40.0%
CAATGCAATATGGTAGGGTT+AGG - chr7_3:6552804-6552823 None:intergenic 40.0%
AGCAATCGTTGAGAAGTTTG+AGG - chr7_3:6553171-6553190 None:intergenic 40.0%
!! TCCTTCATTGGATTTTGGGT+TGG + chr7_3:6553392-6553411 Msa1091230:intron 40.0%
!!! CCTTCATTGGATTTTGGGTT+GGG + chr7_3:6553393-6553412 Msa1091230:intron 40.0%
!!! ATTGGATTTTGGGTTGGGTT+GGG + chr7_3:6553398-6553417 Msa1091230:intron 40.0%
!! TGATTGACTTGAGAGTGATG+AGG + chr7_3:6553739-6553758 Msa1091230:intron 40.0%
ACTTGAGAGTGATGAGGTAA+AGG + chr7_3:6553745-6553764 Msa1091230:intron 40.0%
CTTGAGAGTGATGAGGTAAA+GGG + chr7_3:6553746-6553765 Msa1091230:intron 40.0%
GGATGCTATACCCAATTTGT+TGG + chr7_3:6553797-6553816 Msa1091230:intron 40.0%
AGAGAATCCAAAGAGTTTGC+AGG + chr7_3:6553836-6553855 Msa1091230:intron 40.0%
CCGTCCACTAAAACAGAATA+TGG + chr7_3:6554340-6554359 Msa1091230:intron 40.0%
GGAAGTGGTGAAACTTAGAT+TGG - chr7_3:6554951-6554970 None:intergenic 40.0%
ACCACTTCCCTAACAAGATT+AGG + chr7_3:6554962-6554981 Msa1091230:intron 40.0%
ACCTAATCTTGTTAGGGAAG+TGG - chr7_3:6554966-6554985 None:intergenic 40.0%
ACTTCCCTAACAAGATTAGG+TGG + chr7_3:6554965-6554984 Msa1091230:intron 40.0%
!! TTGTGGGATTGTTAAGTTGG+GGG - chr7_3:6555005-6555024 None:intergenic 40.0%
GTGTCCTAATAACGTGTAGT+TGG + chr7_3:6555136-6555155 Msa1091230:intron 40.0%
TGATAAAGCAACATGGTGAG+TGG - chr7_3:6555193-6555212 None:intergenic 40.0%
! TTTGGTGTGCCTAATGAAAC+TGG + chr7_3:6555605-6555624 Msa1091230:intron 40.0%
!! AATGTTTGGTGCTTCTCACA+TGG + chr7_3:6555663-6555682 Msa1091230:intron 40.0%
!! ATGTTTGGTGCTTCTCACAT+GGG + chr7_3:6555664-6555683 Msa1091230:intron 40.0%
TGGTCTGGTGTAATTTGGTT+AGG + chr7_3:6555834-6555853 Msa1091230:intron 40.0%
ATTCGTGTCTTTGCATGTAC+CGG - chr7_3:6555962-6555981 None:intergenic 40.0%
!! CTTACGCATAAGTGTTGAGT+TGG + chr7_3:6556111-6556130 Msa1091230:intron 40.0%
! ATGATATTGGTGGATGATGC+TGG + chr7_3:6556379-6556398 Msa1091230:CDS 40.0%
CTCAATCATTCTCCATGGAA+TGG + chr7_3:6556418-6556437 Msa1091230:CDS 40.0%
TGCACTAGCATTCACATACA+AGG + chr7_3:6556492-6556511 Msa1091230:CDS 40.0%
CTAGCATTCACATACAAGGT+TGG + chr7_3:6556496-6556515 Msa1091230:intron 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_3:6556710-6556729 Msa1091230:CDS 40.0%
TCGTAGATCGCGTAAATTGA+CGG - chr7_3:6557083-6557102 None:intergenic 40.0%
TAGTGATTTGACGTTTGGAG+TGG + chr7_3:6557179-6557198 Msa1091230:CDS 40.0%
! GAGTGGATTTGAAGCAGATA+AGG + chr7_3:6557196-6557215 Msa1091230:CDS 40.0%
TCATTGGATGCAGAGAATTG+CGG + chr7_3:6557321-6557340 Msa1091230:intron 40.0%
TGGAACTTCATACTCCCAAT+CGG - chr7_3:6557715-6557734 None:intergenic 40.0%
! AATGATCGATCGTAGCTTGT+TGG + chr7_3:6557943-6557962 Msa1091230:CDS 40.0%
!! ATGATCGATCGTAGCTTGTT+GGG + chr7_3:6557944-6557963 Msa1091230:CDS 40.0%
ACGAAAAAACCGTTGTCTTG+TGG - chr7_3:6558179-6558198 None:intergenic 40.0%
!! TTAACTGGATGTGGTTCTGA+AGG - chr7_3:6558239-6558258 None:intergenic 40.0%
GAGGTTACAGTAACAGCAAT+AGG - chr7_3:6558272-6558291 None:intergenic 40.0%
!! AATAAACTTGCCTGGTTCTG+AGG - chr7_3:6558291-6558310 None:intergenic 40.0%
GAAGGATCAGCAATGTGAAT+CGG - chr7_3:6558388-6558407 None:intergenic 40.0%
TCTTTCACATGAGAATTCGC+GGG - chr7_3:6558421-6558440 None:intergenic 40.0%
TGCGTTTCATGATGGTTAGA+AGG - chr7_3:6558475-6558494 None:intergenic 40.0%
CAACTATCTGCGTTTCATGA+TGG - chr7_3:6558483-6558502 None:intergenic 40.0%
ATCGATGCATACGACTTCTT+TGG - chr7_3:6558601-6558620 None:intergenic 40.0%
GCTTAAACAAAAACAGGGCT+TGG - chr7_3:6558652-6558671 None:intergenic 40.0%
TTGCAGGTTAAAGTCCCAAA+AGG + chr7_3:6558691-6558710 Msa1091230:intron 40.0%
! CCGGTACCAAATTTCCTTTT+GGG - chr7_3:6558708-6558727 None:intergenic 40.0%
CCCAAAAGGAAATTTGGTAC+CGG + chr7_3:6558705-6558724 Msa1091230:CDS 40.0%
GCCAACTAATACTGTAAAGC+AGG + chr7_3:6558765-6558784 Msa1091230:CDS 40.0%
GCCTGCTTTACAGTATTAGT+TGG - chr7_3:6558769-6558788 None:intergenic 40.0%
AACAAACATGGTTCTCACAC+CGG + chr7_3:6559037-6559056 Msa1091230:intron 40.0%
ATTCAAACCTAGGTCCTTGT+GGG + chr7_3:6559067-6559086 Msa1091230:intron 40.0%
GAATTGACTAAGATCCCACA+AGG - chr7_3:6559084-6559103 None:intergenic 40.0%
!!! GCTTCTGTTTTTAACAGTCG+AGG + chr7_3:6559229-6559248 Msa1091230:CDS 40.0%
AAATGTTACGGTTGCTCAGT+TGG + chr7_3:6559283-6559302 Msa1091230:CDS 40.0%
TCAGGTATGATCTTCATTGG+TGG + chr7_3:6559528-6559547 Msa1091230:intron 40.0%
!! GGTTTTGGTGGATATCATCA+TGG + chr7_3:6559948-6559967 Msa1091230:intron 40.0%
TTGTTGGACAGTACACATCT+TGG + chr7_3:6560042-6560061 Msa1091230:intron 40.0%
!!! TGCTTTTTGGCTAGTTGTTC+AGG + chr7_3:6560099-6560118 Msa1091230:intron 40.0%
ACCCACATTTCAGCCAAAAA+AGG - chr7_3:6560144-6560163 None:intergenic 40.0%
TAAGTGCTTAGACATGTCGT+TGG - chr7_3:6560254-6560273 None:intergenic 40.0%
GACATGTCTAAGCACTTAGA+AGG + chr7_3:6560256-6560275 Msa1091230:intron 40.0%
TCTAAGCACTTAGAAGGATG+CGG + chr7_3:6560262-6560281 Msa1091230:intron 40.0%
GACTAACAAAAGGCGACTTT+AGG - chr7_3:6560391-6560410 None:intergenic 40.0%
GACATTAAAAGGGACCAACA+TGG + chr7_3:6560545-6560564 Msa1091230:intron 40.0%
CATAGCTTAAGGACTTGGAA+TGG - chr7_3:6560743-6560762 None:intergenic 40.0%
! AGGCTTCACCTATTGCTATT+GGG + chr7_3:6560835-6560854 Msa1091230:intron 40.0%
AATGATTCATTCAGAGGTCG+TGG + chr7_3:6561620-6561639 Msa1091230:CDS 40.0%
TTCAGAGGTCGTGGAAATTT+CGG + chr7_3:6561629-6561648 Msa1091230:CDS 40.0%
CTCTAATAGGAAACTCACCT+CGG - chr7_3:6561694-6561713 None:intergenic 40.0%
! AAAAATCATTCGGTGGCAAC+GGG - chr7_3:6561800-6561819 None:intergenic 40.0%
! GAAAAATCATTCGGTGGCAA+CGG - chr7_3:6561801-6561820 None:intergenic 40.0%
!!! TTTCCAAGGCCTTTTTTGGT+AGG + chr7_3:6561827-6561846 Msa1091230:three_prime_UTR 40.0%
TATCCTACCAAAAAAGGCCT+TGG - chr7_3:6561833-6561852 None:intergenic 40.0%
! TATGAGAAGTCTTTGAAGGG+TGG - chr7_3:6561888-6561907 None:intergenic 40.0%
GTTATTTGCCATGATCTCAG+TGG + chr7_3:6561950-6561969 Msa1091230:three_prime_UTR 40.0%
TGCTAAAACCACTGAGATCA+TGG - chr7_3:6561961-6561980 None:intergenic 40.0%
! TTTTCGTGGTCTCACTGTTG+CGG + chr7_3:6553203-6553222 Msa1091230:CDS 45.0%
CCCAACCCAAAATCCAATGA+AGG - chr7_3:6553396-6553415 None:intergenic 45.0%
!!! CATTGGATTTTGGGTTGGGT+TGG + chr7_3:6553397-6553416 Msa1091230:intron 45.0%
!!! TTTTGGGTTGGGTTGGGTTT+TGG + chr7_3:6553404-6553423 Msa1091230:intron 45.0%
TCGAGATTTCGACGAGTCAT+CGG - chr7_3:6553623-6553642 None:intergenic 45.0%
! AAAGAGGCATGTAGCCGTAA+TGG - chr7_3:6554010-6554029 None:intergenic 45.0%
! GGTATCAACTAGGTTTTCGG+CGG - chr7_3:6554156-6554175 None:intergenic 45.0%
AGTCACATGTGTCCGTATGT+TGG - chr7_3:6555405-6555424 None:intergenic 45.0%
TGTGCCTAATGAAACTGGCA+TGG + chr7_3:6555610-6555629 Msa1091230:intron 45.0%
! ATATTGGTGGATGATGCTGG+TGG + chr7_3:6556382-6556401 Msa1091230:CDS 45.0%
CATGGAGAATGATTGAGTGC+TGG - chr7_3:6556415-6556434 None:intergenic 45.0%
CAGCACTCAATCATTCTCCA+TGG + chr7_3:6556413-6556432 Msa1091230:CDS 45.0%
GTCGCATCAACTTTGCAAGA+TGG - chr7_3:6556705-6556724 None:intergenic 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_3:6556713-6556732 Msa1091230:CDS 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_3:6556721-6556740 Msa1091230:CDS 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_3:6556722-6556741 Msa1091230:CDS 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_3:6556744-6556763 Msa1091230:CDS 45.0%
GCTATAGCAGTGCAACATAC+CGG + chr7_3:6557045-6557064 Msa1091230:intron 45.0%
!! TGCATTTTGTCGTTTGCAGG+AGG + chr7_3:6557141-6557160 Msa1091230:intron 45.0%
CGCGTTAGTGATTTGACGTT+TGG + chr7_3:6557174-6557193 Msa1091230:CDS 45.0%
!! AAGGTTGATGGGAATACTGC+AGG + chr7_3:6557215-6557234 Msa1091230:CDS 45.0%
GGAACTTCATACTCCCAATC+GGG - chr7_3:6557714-6557733 None:intergenic 45.0%
!! GGTTCTGAAGAAGGTTCTGT+TGG - chr7_3:6557735-6557754 None:intergenic 45.0%
GATCATTCCAACGACATTGC+AGG - chr7_3:6557930-6557949 None:intergenic 45.0%
ACCGGAGACCAATATATGCA+CGG + chr7_3:6557981-6558000 Msa1091230:CDS 45.0%
TTCCTTGCTCCACAAGACAA+CGG + chr7_3:6558167-6558186 Msa1091230:intron 45.0%
!! GATGTGGTTCTGAAGGTTCA+GGG - chr7_3:6558232-6558251 None:intergenic 45.0%
GTTACTGTAACCTCAGAACC+AGG + chr7_3:6558278-6558297 Msa1091230:intron 45.0%
CTTTCACATGAGAATTCGCG+GGG - chr7_3:6558420-6558439 None:intergenic 45.0%
! GCCGGTACCAAATTTCCTTT+TGG - chr7_3:6558709-6558728 None:intergenic 45.0%
GTTGGCACATACACTTTAGC+CGG - chr7_3:6558727-6558746 None:intergenic 45.0%
AAGGACCTAGGTTTGAATCC+CGG - chr7_3:6559065-6559084 None:intergenic 45.0%
GATTCAAACCTAGGTCCTTG+TGG + chr7_3:6559066-6559085 Msa1091230:intron 45.0%
!! GTAGGTTGGTTCAGTTGGTA+AGG - chr7_3:6559106-6559125 None:intergenic 45.0%
!! CCAATGTAGGTTGGTTCAGT+TGG - chr7_3:6559111-6559130 None:intergenic 45.0%
CCAACTGAACCAACCTACAT+TGG + chr7_3:6559108-6559127 Msa1091230:intron 45.0%
ACCAACCTACATTGGCACTT+CGG + chr7_3:6559116-6559135 Msa1091230:intron 45.0%
! TTTGACCGAAGTGCCAATGT+AGG - chr7_3:6559124-6559143 None:intergenic 45.0%
AAATTTGGACCGATCAAGCC+AGG + chr7_3:6559320-6559339 Msa1091230:CDS 45.0%
!! TTTCTGACTTGGATGCATCC+TGG - chr7_3:6559341-6559360 None:intergenic 45.0%
! TTGGTGGATATCATCATGGG+TGG + chr7_3:6559952-6559971 Msa1091230:intron 45.0%
!! CCAAAAAGCACCCAGTTGAA+AGG - chr7_3:6560089-6560108 None:intergenic 45.0%
! CCTTTCAACTGGGTGCTTTT+TGG + chr7_3:6560086-6560105 Msa1091230:intron 45.0%
GGATGCGGTATCCTTCTATT+TGG + chr7_3:6560277-6560296 Msa1091230:intron 45.0%
CAGGCTTCACCTATTGCTAT+TGG + chr7_3:6560834-6560853 Msa1091230:intron 45.0%
! GGCTTCACCTATTGCTATTG+GGG + chr7_3:6560836-6560855 Msa1091230:intron 45.0%
! GCTTCACCTATTGCTATTGG+GGG + chr7_3:6560837-6560856 Msa1091230:CDS 45.0%
! CTTCACCTATTGCTATTGGG+GGG + chr7_3:6560838-6560857 Msa1091230:CDS 45.0%
TTTCAAATTACCTCGGGCAG+TGG - chr7_3:6560892-6560911 None:intergenic 45.0%
GCTACCCCAACTTTCTCTAA+TGG - chr7_3:6561171-6561190 None:intergenic 45.0%
GAGAAGAGCAAGATCAGAAG+AGG + chr7_3:6561276-6561295 Msa1091230:intron 45.0%
AGCAAGATCAGAAGAGGTAG+AGG + chr7_3:6561282-6561301 Msa1091230:intron 45.0%
TGGAAGACCTAGGTTTCCTT+CGG + chr7_3:6561580-6561599 Msa1091230:CDS 45.0%
TATGGGCGAAACAATGACCA+TGG + chr7_3:6561665-6561684 Msa1091230:CDS 45.0%
AACAATGACCATGGAAACCG+AGG + chr7_3:6561674-6561693 Msa1091230:CDS 45.0%
CGAGGTGAGTTTCCTATTAG+AGG + chr7_3:6561692-6561711 Msa1091230:CDS 45.0%
GAGTTTCCTATTAGAGGTCG+TGG + chr7_3:6561698-6561717 Msa1091230:CDS 45.0%
GTGGAGAAGGTTATCACCAA+GGG + chr7_3:6561732-6561751 Msa1091230:CDS 45.0%
! TTTTCGTGGTCTCACTGTTG+CGG + chr7_3:6553203-6553222 Msa1091230:CDS 45.0%
CCCAACCCAAAATCCAATGA+AGG - chr7_3:6553396-6553415 None:intergenic 45.0%
!!! CATTGGATTTTGGGTTGGGT+TGG + chr7_3:6553397-6553416 Msa1091230:intron 45.0%
!!! TTTTGGGTTGGGTTGGGTTT+TGG + chr7_3:6553404-6553423 Msa1091230:intron 45.0%
TCGAGATTTCGACGAGTCAT+CGG - chr7_3:6553623-6553642 None:intergenic 45.0%
! AAAGAGGCATGTAGCCGTAA+TGG - chr7_3:6554010-6554029 None:intergenic 45.0%
! GGTATCAACTAGGTTTTCGG+CGG - chr7_3:6554156-6554175 None:intergenic 45.0%
AGTCACATGTGTCCGTATGT+TGG - chr7_3:6555405-6555424 None:intergenic 45.0%
TGTGCCTAATGAAACTGGCA+TGG + chr7_3:6555610-6555629 Msa1091230:intron 45.0%
! ATATTGGTGGATGATGCTGG+TGG + chr7_3:6556382-6556401 Msa1091230:CDS 45.0%
CATGGAGAATGATTGAGTGC+TGG - chr7_3:6556415-6556434 None:intergenic 45.0%
CAGCACTCAATCATTCTCCA+TGG + chr7_3:6556413-6556432 Msa1091230:CDS 45.0%
GTCGCATCAACTTTGCAAGA+TGG - chr7_3:6556705-6556724 None:intergenic 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_3:6556713-6556732 Msa1091230:CDS 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_3:6556721-6556740 Msa1091230:CDS 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_3:6556722-6556741 Msa1091230:CDS 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_3:6556744-6556763 Msa1091230:CDS 45.0%
GCTATAGCAGTGCAACATAC+CGG + chr7_3:6557045-6557064 Msa1091230:intron 45.0%
!! TGCATTTTGTCGTTTGCAGG+AGG + chr7_3:6557141-6557160 Msa1091230:intron 45.0%
CGCGTTAGTGATTTGACGTT+TGG + chr7_3:6557174-6557193 Msa1091230:CDS 45.0%
!! AAGGTTGATGGGAATACTGC+AGG + chr7_3:6557215-6557234 Msa1091230:CDS 45.0%
GGAACTTCATACTCCCAATC+GGG - chr7_3:6557714-6557733 None:intergenic 45.0%
!! GGTTCTGAAGAAGGTTCTGT+TGG - chr7_3:6557735-6557754 None:intergenic 45.0%
GATCATTCCAACGACATTGC+AGG - chr7_3:6557930-6557949 None:intergenic 45.0%
ACCGGAGACCAATATATGCA+CGG + chr7_3:6557981-6558000 Msa1091230:CDS 45.0%
TTCCTTGCTCCACAAGACAA+CGG + chr7_3:6558167-6558186 Msa1091230:intron 45.0%
!! GATGTGGTTCTGAAGGTTCA+GGG - chr7_3:6558232-6558251 None:intergenic 45.0%
GTTACTGTAACCTCAGAACC+AGG + chr7_3:6558278-6558297 Msa1091230:intron 45.0%
CTTTCACATGAGAATTCGCG+GGG - chr7_3:6558420-6558439 None:intergenic 45.0%
! GCCGGTACCAAATTTCCTTT+TGG - chr7_3:6558709-6558728 None:intergenic 45.0%
GTTGGCACATACACTTTAGC+CGG - chr7_3:6558727-6558746 None:intergenic 45.0%
AAGGACCTAGGTTTGAATCC+CGG - chr7_3:6559065-6559084 None:intergenic 45.0%
GATTCAAACCTAGGTCCTTG+TGG + chr7_3:6559066-6559085 Msa1091230:intron 45.0%
!! GTAGGTTGGTTCAGTTGGTA+AGG - chr7_3:6559106-6559125 None:intergenic 45.0%
!! CCAATGTAGGTTGGTTCAGT+TGG - chr7_3:6559111-6559130 None:intergenic 45.0%
CCAACTGAACCAACCTACAT+TGG + chr7_3:6559108-6559127 Msa1091230:intron 45.0%
ACCAACCTACATTGGCACTT+CGG + chr7_3:6559116-6559135 Msa1091230:intron 45.0%
! TTTGACCGAAGTGCCAATGT+AGG - chr7_3:6559124-6559143 None:intergenic 45.0%
AAATTTGGACCGATCAAGCC+AGG + chr7_3:6559320-6559339 Msa1091230:CDS 45.0%
!! TTTCTGACTTGGATGCATCC+TGG - chr7_3:6559341-6559360 None:intergenic 45.0%
! TTGGTGGATATCATCATGGG+TGG + chr7_3:6559952-6559971 Msa1091230:intron 45.0%
!! CCAAAAAGCACCCAGTTGAA+AGG - chr7_3:6560089-6560108 None:intergenic 45.0%
! CCTTTCAACTGGGTGCTTTT+TGG + chr7_3:6560086-6560105 Msa1091230:intron 45.0%
GGATGCGGTATCCTTCTATT+TGG + chr7_3:6560277-6560296 Msa1091230:intron 45.0%
CAGGCTTCACCTATTGCTAT+TGG + chr7_3:6560834-6560853 Msa1091230:intron 45.0%
! GGCTTCACCTATTGCTATTG+GGG + chr7_3:6560836-6560855 Msa1091230:intron 45.0%
! GCTTCACCTATTGCTATTGG+GGG + chr7_3:6560837-6560856 Msa1091230:CDS 45.0%
! CTTCACCTATTGCTATTGGG+GGG + chr7_3:6560838-6560857 Msa1091230:CDS 45.0%
TTTCAAATTACCTCGGGCAG+TGG - chr7_3:6560892-6560911 None:intergenic 45.0%
GCTACCCCAACTTTCTCTAA+TGG - chr7_3:6561171-6561190 None:intergenic 45.0%
GAGAAGAGCAAGATCAGAAG+AGG + chr7_3:6561276-6561295 Msa1091230:intron 45.0%
AGCAAGATCAGAAGAGGTAG+AGG + chr7_3:6561282-6561301 Msa1091230:intron 45.0%
TGGAAGACCTAGGTTTCCTT+CGG + chr7_3:6561580-6561599 Msa1091230:CDS 45.0%
TATGGGCGAAACAATGACCA+TGG + chr7_3:6561665-6561684 Msa1091230:CDS 45.0%
AACAATGACCATGGAAACCG+AGG + chr7_3:6561674-6561693 Msa1091230:CDS 45.0%
CGAGGTGAGTTTCCTATTAG+AGG + chr7_3:6561692-6561711 Msa1091230:CDS 45.0%
GAGTTTCCTATTAGAGGTCG+TGG + chr7_3:6561698-6561717 Msa1091230:CDS 45.0%
GTGGAGAAGGTTATCACCAA+GGG + chr7_3:6561732-6561751 Msa1091230:CDS 45.0%
!! AATATATTTATGTTTATTAT+TGG + chr7_3:6552870-6552889 Msa1091230:intron 5.0%
!! ACTATAAAATAAAAAAATTT+AGG - chr7_3:6553650-6553669 None:intergenic 5.0%
!!! TTTTTTTATTTTATAGTTAT+TGG + chr7_3:6553653-6553672 Msa1091230:intron 5.0%
!!! TTTTTTATTTTATAGTTATT+GGG + chr7_3:6553654-6553673 Msa1091230:intron 5.0%
!!! ATTTTTTAATATTTTCATTT+AGG + chr7_3:6554181-6554200 Msa1091230:intron 5.0%
!!! ATTTTGATAATATTTTTTTT+AGG + chr7_3:6554433-6554452 Msa1091230:intron 5.0%
!!! TTGAAATATATTTTTATTTT+TGG + chr7_3:6555351-6555370 Msa1091230:intron 5.0%
!!! TTATTTTTTTTTAATATAAC+AGG + chr7_3:6557631-6557650 Msa1091230:intron 5.0%
!!! TATTTTTTTTTAATATAACA+GGG + chr7_3:6557632-6557651 Msa1091230:intron 5.0%
!!! ATATTAAAATAACATAATTT+TGG + chr7_3:6559927-6559946 Msa1091230:intron 5.0%
!! AATATATTTATGTTTATTAT+TGG + chr7_3:6552870-6552889 Msa1091230:intron 5.0%
!! ACTATAAAATAAAAAAATTT+AGG - chr7_3:6553650-6553669 None:intergenic 5.0%
!!! TTTTTTTATTTTATAGTTAT+TGG + chr7_3:6553653-6553672 Msa1091230:intron 5.0%
!!! TTTTTTATTTTATAGTTATT+GGG + chr7_3:6553654-6553673 Msa1091230:intron 5.0%
!!! ATTTTTTAATATTTTCATTT+AGG + chr7_3:6554181-6554200 Msa1091230:intron 5.0%
!!! ATTTTGATAATATTTTTTTT+AGG + chr7_3:6554433-6554452 Msa1091230:intron 5.0%
!!! TTGAAATATATTTTTATTTT+TGG + chr7_3:6555351-6555370 Msa1091230:intron 5.0%
!!! TTATTTTTTTTTAATATAAC+AGG + chr7_3:6557631-6557650 Msa1091230:intron 5.0%
!!! TATTTTTTTTTAATATAACA+GGG + chr7_3:6557632-6557651 Msa1091230:intron 5.0%
!!! ATATTAAAATAACATAATTT+TGG + chr7_3:6559927-6559946 Msa1091230:intron 5.0%
!!! GTTGGGTTGGGTTTTGGTGT+TGG + chr7_3:6553410-6553429 Msa1091230:intron 50.0%
CGTGCAACCTGCAAACTCTT+TGG - chr7_3:6553846-6553865 None:intergenic 50.0%
!! GCGTTGAAGAGGAGTATCGA+GGG - chr7_3:6554889-6554908 None:intergenic 50.0%
AAGCAACATGGTGAGTGGTG+AGG - chr7_3:6555188-6555207 None:intergenic 50.0%
! GTCTTTGCATGTACCGGTGT+CGG - chr7_3:6555956-6555975 None:intergenic 50.0%
!! GTTGAGTTGGTGTCAGACAC+TGG + chr7_3:6556124-6556143 Msa1091230:intron 50.0%
!! AAACTCCTTTGGTGCCTCCT+AGG + chr7_3:6556214-6556233 Msa1091230:intron 50.0%
!! ATTTGCCTAGGAGGCACCAA+AGG - chr7_3:6556222-6556241 None:intergenic 50.0%
CGGCGCTATAACGTGCATAT+CGG + chr7_3:6556948-6556967 Msa1091230:intron 50.0%
ATGGGATGTACGTTCCCGAT+TGG + chr7_3:6557697-6557716 Msa1091230:CDS 50.0%
TGGGATGTACGTTCCCGATT+GGG + chr7_3:6557698-6557717 Msa1091230:CDS 50.0%
ATTCCAACGACATTGCAGGC+TGG - chr7_3:6557926-6557945 None:intergenic 50.0%
! CCCGTGCATATATTGGTCTC+CGG - chr7_3:6557985-6558004 None:intergenic 50.0%
CCGGAGACCAATATATGCAC+GGG + chr7_3:6557982-6558001 Msa1091230:CDS 50.0%
AACCGTTGTCTTGTGGAGCA+AGG - chr7_3:6558172-6558191 None:intergenic 50.0%
!! GGATGTGGTTCTGAAGGTTC+AGG - chr7_3:6558233-6558252 None:intergenic 50.0%
CATTGCTGATCCTTCTCCAC+CGG + chr7_3:6558393-6558412 Msa1091230:CDS 50.0%
!! ACATTATCCGGTGCTGCATC+AGG - chr7_3:6558844-6558863 None:intergenic 50.0%
! GATGCAGCACCGGATAATGT+TGG + chr7_3:6558844-6558863 Msa1091230:intron 50.0%
TCGGGGTTGCCAACATTATC+CGG - chr7_3:6558856-6558875 None:intergenic 50.0%
ATTGGATTCCTGGGTTCACC+AGG + chr7_3:6558959-6558978 Msa1091230:intron 50.0%
TTGGATTCCTGGGTTCACCA+GGG + chr7_3:6558960-6558979 Msa1091230:intron 50.0%
TTTAAGCGCTCTCTGAGCCT+TGG - chr7_3:6558998-6559017 None:intergenic 50.0%
CTAAGATCCCACAAGGACCT+AGG - chr7_3:6559077-6559096 None:intergenic 50.0%
! ACCGAAGTGCCAATGTAGGT+TGG - chr7_3:6559120-6559139 None:intergenic 50.0%
! TGGATGCATCCTGGCTTGAT+CGG - chr7_3:6559332-6559351 None:intergenic 50.0%
TGTCTGTCTTTGCAGCAGCA+GGG + chr7_3:6559451-6559470 Msa1091230:intron 50.0%
CAGCAGCAGGGATACTGTTT+CGG + chr7_3:6559463-6559482 Msa1091230:intron 50.0%
GGACAGTACACATCTTGGTG+TGG + chr7_3:6560047-6560066 Msa1091230:intron 50.0%
ATAAAGAGAACCACTGCCCG+AGG + chr7_3:6560879-6560898 Msa1091230:CDS 50.0%
AAGCCTTCTCCCACTAAGTG+GGG - chr7_3:6561422-6561441 None:intergenic 50.0%
CAAGCCTTCTCCCACTAAGT+GGG - chr7_3:6561423-6561442 None:intergenic 50.0%
!! TTTGCTGTTTCAGTTGGCGG+TGG + chr7_3:6561545-6561564 Msa1091230:intron 50.0%
GGAAGACCTAGGTTTCCTTC+GGG + chr7_3:6561581-6561600 Msa1091230:CDS 50.0%
CTTCTTCCCGAAGGAAACCT+AGG - chr7_3:6561590-6561609 None:intergenic 50.0%
AGGTTTCCTTCGGGAAGAAG+TGG + chr7_3:6561590-6561609 Msa1091230:CDS 50.0%
CGAAATCCACTTCTTCCCGA+AGG - chr7_3:6561599-6561618 None:intergenic 50.0%
AGAGGTCGTGGAAATTTCGG+TGG + chr7_3:6561632-6561651 Msa1091230:CDS 50.0%
! GTGGAAATTTCGGTGGTGGT+CGG + chr7_3:6561639-6561658 Msa1091230:CDS 50.0%
! TGGAAATTTCGGTGGTGGTC+GGG + chr7_3:6561640-6561659 Msa1091230:CDS 50.0%
GAAACTCACCTCGGTTTCCA+TGG - chr7_3:6561685-6561704 None:intergenic 50.0%
CTAGGACCACGACCTCTAAT+AGG - chr7_3:6561707-6561726 None:intergenic 50.0%
ATTAGAGGTCGTGGTCCTAG+TGG + chr7_3:6561707-6561726 Msa1091230:CDS 50.0%
TAACCTTCTCCACGTCCACT+AGG - chr7_3:6561725-6561744 None:intergenic 50.0%
CGTGGAGAAGGTTATCACCA+AGG + chr7_3:6561731-6561750 Msa1091230:CDS 50.0%
GAAGGTTATCACCAAGGGAG+AGG + chr7_3:6561737-6561756 Msa1091230:CDS 50.0%
TATCACCAAGGGAGAGGAAG+AGG + chr7_3:6561743-6561762 Msa1091230:CDS 50.0%
!!! GTTGGGTTGGGTTTTGGTGT+TGG + chr7_3:6553410-6553429 Msa1091230:intron 50.0%
CGTGCAACCTGCAAACTCTT+TGG - chr7_3:6553846-6553865 None:intergenic 50.0%
!! GCGTTGAAGAGGAGTATCGA+GGG - chr7_3:6554889-6554908 None:intergenic 50.0%
AAGCAACATGGTGAGTGGTG+AGG - chr7_3:6555188-6555207 None:intergenic 50.0%
! GTCTTTGCATGTACCGGTGT+CGG - chr7_3:6555956-6555975 None:intergenic 50.0%
!! GTTGAGTTGGTGTCAGACAC+TGG + chr7_3:6556124-6556143 Msa1091230:intron 50.0%
!! AAACTCCTTTGGTGCCTCCT+AGG + chr7_3:6556214-6556233 Msa1091230:intron 50.0%
!! ATTTGCCTAGGAGGCACCAA+AGG - chr7_3:6556222-6556241 None:intergenic 50.0%
CGGCGCTATAACGTGCATAT+CGG + chr7_3:6556948-6556967 Msa1091230:intron 50.0%
ATGGGATGTACGTTCCCGAT+TGG + chr7_3:6557697-6557716 Msa1091230:CDS 50.0%
TGGGATGTACGTTCCCGATT+GGG + chr7_3:6557698-6557717 Msa1091230:CDS 50.0%
ATTCCAACGACATTGCAGGC+TGG - chr7_3:6557926-6557945 None:intergenic 50.0%
! CCCGTGCATATATTGGTCTC+CGG - chr7_3:6557985-6558004 None:intergenic 50.0%
CCGGAGACCAATATATGCAC+GGG + chr7_3:6557982-6558001 Msa1091230:CDS 50.0%
AACCGTTGTCTTGTGGAGCA+AGG - chr7_3:6558172-6558191 None:intergenic 50.0%
!! GGATGTGGTTCTGAAGGTTC+AGG - chr7_3:6558233-6558252 None:intergenic 50.0%
CATTGCTGATCCTTCTCCAC+CGG + chr7_3:6558393-6558412 Msa1091230:CDS 50.0%
!! ACATTATCCGGTGCTGCATC+AGG - chr7_3:6558844-6558863 None:intergenic 50.0%
! GATGCAGCACCGGATAATGT+TGG + chr7_3:6558844-6558863 Msa1091230:intron 50.0%
TCGGGGTTGCCAACATTATC+CGG - chr7_3:6558856-6558875 None:intergenic 50.0%
ATTGGATTCCTGGGTTCACC+AGG + chr7_3:6558959-6558978 Msa1091230:intron 50.0%
TTGGATTCCTGGGTTCACCA+GGG + chr7_3:6558960-6558979 Msa1091230:intron 50.0%
TTTAAGCGCTCTCTGAGCCT+TGG - chr7_3:6558998-6559017 None:intergenic 50.0%
CTAAGATCCCACAAGGACCT+AGG - chr7_3:6559077-6559096 None:intergenic 50.0%
! ACCGAAGTGCCAATGTAGGT+TGG - chr7_3:6559120-6559139 None:intergenic 50.0%
! TGGATGCATCCTGGCTTGAT+CGG - chr7_3:6559332-6559351 None:intergenic 50.0%
TGTCTGTCTTTGCAGCAGCA+GGG + chr7_3:6559451-6559470 Msa1091230:intron 50.0%
CAGCAGCAGGGATACTGTTT+CGG + chr7_3:6559463-6559482 Msa1091230:intron 50.0%
GGACAGTACACATCTTGGTG+TGG + chr7_3:6560047-6560066 Msa1091230:intron 50.0%
ATAAAGAGAACCACTGCCCG+AGG + chr7_3:6560879-6560898 Msa1091230:CDS 50.0%
AAGCCTTCTCCCACTAAGTG+GGG - chr7_3:6561422-6561441 None:intergenic 50.0%
CAAGCCTTCTCCCACTAAGT+GGG - chr7_3:6561423-6561442 None:intergenic 50.0%
!! TTTGCTGTTTCAGTTGGCGG+TGG + chr7_3:6561545-6561564 Msa1091230:intron 50.0%
GGAAGACCTAGGTTTCCTTC+GGG + chr7_3:6561581-6561600 Msa1091230:CDS 50.0%
CTTCTTCCCGAAGGAAACCT+AGG - chr7_3:6561590-6561609 None:intergenic 50.0%
AGGTTTCCTTCGGGAAGAAG+TGG + chr7_3:6561590-6561609 Msa1091230:CDS 50.0%
CGAAATCCACTTCTTCCCGA+AGG - chr7_3:6561599-6561618 None:intergenic 50.0%
AGAGGTCGTGGAAATTTCGG+TGG + chr7_3:6561632-6561651 Msa1091230:CDS 50.0%
! GTGGAAATTTCGGTGGTGGT+CGG + chr7_3:6561639-6561658 Msa1091230:CDS 50.0%
! TGGAAATTTCGGTGGTGGTC+GGG + chr7_3:6561640-6561659 Msa1091230:CDS 50.0%
GAAACTCACCTCGGTTTCCA+TGG - chr7_3:6561685-6561704 None:intergenic 50.0%
CTAGGACCACGACCTCTAAT+AGG - chr7_3:6561707-6561726 None:intergenic 50.0%
ATTAGAGGTCGTGGTCCTAG+TGG + chr7_3:6561707-6561726 Msa1091230:CDS 50.0%
TAACCTTCTCCACGTCCACT+AGG - chr7_3:6561725-6561744 None:intergenic 50.0%
CGTGGAGAAGGTTATCACCA+AGG + chr7_3:6561731-6561750 Msa1091230:CDS 50.0%
GAAGGTTATCACCAAGGGAG+AGG + chr7_3:6561737-6561756 Msa1091230:CDS 50.0%
TATCACCAAGGGAGAGGAAG+AGG + chr7_3:6561743-6561762 Msa1091230:CDS 50.0%
!!! GGGTTGGGTTTTGGTGTTGG+TGG + chr7_3:6553413-6553432 Msa1091230:intron 55.0%
!! CGCGTTGAAGAGGAGTATCG+AGG - chr7_3:6554890-6554909 None:intergenic 55.0%
CTCACACACACGCGTTGAAG+AGG - chr7_3:6554900-6554919 None:intergenic 55.0%
CATGGTGAGTGGTGAGGAGT+CGG - chr7_3:6555182-6555201 None:intergenic 55.0%
!! ACACTATGAGGCACCGACAC+CGG + chr7_3:6555940-6555959 Msa1091230:intron 55.0%
TGTGGAGTAAGAGGCGACAC+TGG + chr7_3:6557899-6557918 Msa1091230:CDS 55.0%
ACAGGCGCCCGTGCATATAT+TGG - chr7_3:6557992-6558011 None:intergenic 55.0%
ACATGAGAATTCGCGGGGTC+CGG - chr7_3:6558415-6558434 None:intergenic 55.0%
! CTGAGCCTTGGCGCTTTTCT+TGG - chr7_3:6558986-6559005 None:intergenic 55.0%
!! GGCTCAGAGAGCGCTTAAAG+AGG + chr7_3:6558999-6559018 Msa1091230:intron 55.0%
CTAGGTTTGAATCCCGGTGC+CGG - chr7_3:6559059-6559078 None:intergenic 55.0%
GTGTCTGTCTTTGCAGCAGC+AGG + chr7_3:6559450-6559469 Msa1091230:intron 55.0%
TGACGCCCCCCAATAGCAAT+AGG - chr7_3:6560846-6560865 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr7_3:6561410-6561429 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr7_3:6561409-6561428 Msa1091230:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr7_3:6561410-6561429 Msa1091230:intron 55.0%
CTTCTCCCACTAAGTGGGGT+CGG - chr7_3:6561418-6561437 None:intergenic 55.0%
CCAAGCCTTCTCCCACTAAG+TGG - chr7_3:6561424-6561443 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG + chr7_3:6561421-6561440 Msa1091230:intron 55.0%
CCTAGGTCTTCCAATACCCC+CGG - chr7_3:6561573-6561592 None:intergenic 55.0%
GGTCGTGGAAATTTCGGTGG+TGG + chr7_3:6561635-6561654 Msa1091230:CDS 55.0%
! GGAAATTTCGGTGGTGGTCG+GGG + chr7_3:6561641-6561660 Msa1091230:CDS 55.0%
!!! GGGTTGGGTTTTGGTGTTGG+TGG + chr7_3:6553413-6553432 Msa1091230:intron 55.0%
!! CGCGTTGAAGAGGAGTATCG+AGG - chr7_3:6554890-6554909 None:intergenic 55.0%
CTCACACACACGCGTTGAAG+AGG - chr7_3:6554900-6554919 None:intergenic 55.0%
CATGGTGAGTGGTGAGGAGT+CGG - chr7_3:6555182-6555201 None:intergenic 55.0%
!! ACACTATGAGGCACCGACAC+CGG + chr7_3:6555940-6555959 Msa1091230:intron 55.0%
TGTGGAGTAAGAGGCGACAC+TGG + chr7_3:6557899-6557918 Msa1091230:CDS 55.0%
ACAGGCGCCCGTGCATATAT+TGG - chr7_3:6557992-6558011 None:intergenic 55.0%
ACATGAGAATTCGCGGGGTC+CGG - chr7_3:6558415-6558434 None:intergenic 55.0%
! CTGAGCCTTGGCGCTTTTCT+TGG - chr7_3:6558986-6559005 None:intergenic 55.0%
!! GGCTCAGAGAGCGCTTAAAG+AGG + chr7_3:6558999-6559018 Msa1091230:intron 55.0%
CTAGGTTTGAATCCCGGTGC+CGG - chr7_3:6559059-6559078 None:intergenic 55.0%
GTGTCTGTCTTTGCAGCAGC+AGG + chr7_3:6559450-6559469 Msa1091230:intron 55.0%
TGACGCCCCCCAATAGCAAT+AGG - chr7_3:6560846-6560865 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr7_3:6561410-6561429 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr7_3:6561409-6561428 Msa1091230:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr7_3:6561410-6561429 Msa1091230:intron 55.0%
CTTCTCCCACTAAGTGGGGT+CGG - chr7_3:6561418-6561437 None:intergenic 55.0%
CCAAGCCTTCTCCCACTAAG+TGG - chr7_3:6561424-6561443 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG + chr7_3:6561421-6561440 Msa1091230:intron 55.0%
CCTAGGTCTTCCAATACCCC+CGG - chr7_3:6561573-6561592 None:intergenic 55.0%
GGTCGTGGAAATTTCGGTGG+TGG + chr7_3:6561635-6561654 Msa1091230:CDS 55.0%
! GGAAATTTCGGTGGTGGTCG+GGG + chr7_3:6561641-6561660 Msa1091230:CDS 55.0%
! GAGTGGTGAGGAGTCGGTTC+AGG - chr7_3:6555176-6555195 None:intergenic 60.0%
GGACCAGCCTGCAATGTCGT+TGG + chr7_3:6557920-6557939 Msa1091230:CDS 60.0%
TGCAGTGCCTGATGCAGCAC+CGG + chr7_3:6558834-6558853 Msa1091230:CDS 60.0%
TTCTTGGCCCTGGTGAACCC+AGG - chr7_3:6558970-6558989 None:intergenic 60.0%
! CTTGGCGCTTTTCTTGGCCC+TGG - chr7_3:6558980-6558999 None:intergenic 60.0%
!! CAGGGCCAAGAAAAGCGCCA+AGG + chr7_3:6558978-6558997 Msa1091230:intron 60.0%
CATGGTTCTCACACCGGCAC+CGG + chr7_3:6559043-6559062 Msa1091230:intron 60.0%
ATGGTTCTCACACCGGCACC+GGG + chr7_3:6559044-6559063 Msa1091230:intron 60.0%
! CGGCACCGGGATTCAAACCT+AGG + chr7_3:6559057-6559076 Msa1091230:intron 60.0%
CGACCCCACTTAGTGGGAGA+AGG + chr7_3:6561416-6561435 Msa1091230:intron 60.0%
GTTTCAGTTGGCGGTGGCAC+CGG + chr7_3:6561551-6561570 Msa1091230:intron 60.0%
TTTCAGTTGGCGGTGGCACC+GGG + chr7_3:6561552-6561571 Msa1091230:intron 60.0%
!! CCGGGGGTATTGGAAGACCT+AGG + chr7_3:6561570-6561589 Msa1091230:CDS 60.0%
! GGTCCTAGTGGACGTGGAGA+AGG + chr7_3:6561719-6561738 Msa1091230:CDS 60.0%
CACCAAGGGAGAGGAAGAGG+TGG + chr7_3:6561746-6561765 Msa1091230:CDS 60.0%
CAAGGGAGAGGAAGAGGTGG+CGG + chr7_3:6561749-6561768 Msa1091230:CDS 60.0%
! GAGTGGTGAGGAGTCGGTTC+AGG - chr7_3:6555176-6555195 None:intergenic 60.0%
GGACCAGCCTGCAATGTCGT+TGG + chr7_3:6557920-6557939 Msa1091230:CDS 60.0%
TGCAGTGCCTGATGCAGCAC+CGG + chr7_3:6558834-6558853 Msa1091230:CDS 60.0%
TTCTTGGCCCTGGTGAACCC+AGG - chr7_3:6558970-6558989 None:intergenic 60.0%
! CTTGGCGCTTTTCTTGGCCC+TGG - chr7_3:6558980-6558999 None:intergenic 60.0%
!! CAGGGCCAAGAAAAGCGCCA+AGG + chr7_3:6558978-6558997 Msa1091230:intron 60.0%
CATGGTTCTCACACCGGCAC+CGG + chr7_3:6559043-6559062 Msa1091230:intron 60.0%
ATGGTTCTCACACCGGCACC+GGG + chr7_3:6559044-6559063 Msa1091230:intron 60.0%
! CGGCACCGGGATTCAAACCT+AGG + chr7_3:6559057-6559076 Msa1091230:intron 60.0%
CGACCCCACTTAGTGGGAGA+AGG + chr7_3:6561416-6561435 Msa1091230:intron 60.0%
GTTTCAGTTGGCGGTGGCAC+CGG + chr7_3:6561551-6561570 Msa1091230:intron 60.0%
TTTCAGTTGGCGGTGGCACC+GGG + chr7_3:6561552-6561571 Msa1091230:intron 60.0%
!! CCGGGGGTATTGGAAGACCT+AGG + chr7_3:6561570-6561589 Msa1091230:CDS 60.0%
! GGTCCTAGTGGACGTGGAGA+AGG + chr7_3:6561719-6561738 Msa1091230:CDS 60.0%
CACCAAGGGAGAGGAAGAGG+TGG + chr7_3:6561746-6561765 Msa1091230:CDS 60.0%
CAAGGGAGAGGAAGAGGTGG+CGG + chr7_3:6561749-6561768 Msa1091230:CDS 60.0%
TGAGAATTCGCGGGGTCCGG+TGG - chr7_3:6558412-6558431 None:intergenic 65.0%
TTCAGTTGGCGGTGGCACCG+GGG + chr7_3:6561553-6561572 Msa1091230:intron 65.0%
! TTCGGTGGTGGTCGGGGCTA+TGG + chr7_3:6561647-6561666 Msa1091230:CDS 65.0%
! TCGGTGGTGGTCGGGGCTAT+GGG + chr7_3:6561648-6561667 Msa1091230:CDS 65.0%
! GGTCGTGGTCCTAGTGGACG+TGG + chr7_3:6561713-6561732 Msa1091230:CDS 65.0%
CGCCACCTCTTCCTCTCCCT+TGG - chr7_3:6561751-6561770 None:intergenic 65.0%
TGAGAATTCGCGGGGTCCGG+TGG - chr7_3:6558412-6558431 None:intergenic 65.0%
TTCAGTTGGCGGTGGCACCG+GGG + chr7_3:6561553-6561572 Msa1091230:intron 65.0%
! TTCGGTGGTGGTCGGGGCTA+TGG + chr7_3:6561647-6561666 Msa1091230:CDS 65.0%
! TCGGTGGTGGTCGGGGCTAT+GGG + chr7_3:6561648-6561667 Msa1091230:CDS 65.0%
! GGTCGTGGTCCTAGTGGACG+TGG + chr7_3:6561713-6561732 Msa1091230:CDS 65.0%
CGCCACCTCTTCCTCTCCCT+TGG - chr7_3:6561751-6561770 None:intergenic 65.0%
TTCGCGGGGTCCGGTGGAGA+AGG - chr7_3:6558406-6558425 None:intergenic 70.0%
! TCAGTTGGCGGTGGCACCGG+GGG + chr7_3:6561554-6561573 Msa1091230:intron 70.0%
! GGAGAGGAAGAGGTGGCGGC+CGG + chr7_3:6561753-6561772 Msa1091230:CDS 70.0%
TTCGCGGGGTCCGGTGGAGA+AGG - chr7_3:6558406-6558425 None:intergenic 70.0%
! TCAGTTGGCGGTGGCACCGG+GGG + chr7_3:6561554-6561573 Msa1091230:intron 70.0%
! GGAGAGGAAGAGGTGGCGGC+CGG + chr7_3:6561753-6561772 Msa1091230:CDS 70.0%
! GGCGGTGGCACCGGGGGTAT+TGG + chr7_3:6561560-6561579 Msa1091230:CDS 75.0%
! GGCGGTGGCACCGGGGGTAT+TGG + chr7_3:6561560-6561579 Msa1091230:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 6552634 6562129 6552634 ID=Msa1091230;Name=Msa1091230
chr7_3 mRNA 6552634 6562129 6552634 ID=Msa1091230-mRNA-1;Parent=Msa1091230;Name=Msa1091230-mRNA-1;_AED=0.21;_eAED=0.22;_QI=238|0.71|0.73|1|0.78|0.73|15|315|618
chr7_3 exon 6552634 6552832 6552634 ID=Msa1091230-mRNA-1:exon:1936;Parent=Msa1091230-mRNA-1
chr7_3 exon 6552940 6553224 6552940 ID=Msa1091230-mRNA-1:exon:1937;Parent=Msa1091230-mRNA-1
chr7_3 exon 6556376 6556513 6556376 ID=Msa1091230-mRNA-1:exon:1938;Parent=Msa1091230-mRNA-1
chr7_3 exon 6556699 6556780 6556699 ID=Msa1091230-mRNA-1:exon:1939;Parent=Msa1091230-mRNA-1
chr7_3 exon 6557163 6557236 6557163 ID=Msa1091230-mRNA-1:exon:1940;Parent=Msa1091230-mRNA-1
chr7_3 exon 6557334 6557440 6557334 ID=Msa1091230-mRNA-1:exon:1941;Parent=Msa1091230-mRNA-1
chr7_3 exon 6557653 6557767 6557653 ID=Msa1091230-mRNA-1:exon:1942;Parent=Msa1091230-mRNA-1
chr7_3 exon 6557893 6558009 6557893 ID=Msa1091230-mRNA-1:exon:1943;Parent=Msa1091230-mRNA-1
chr7_3 exon 6558294 6558303 6558294 ID=Msa1091230-mRNA-1:exon:1944;Parent=Msa1091230-mRNA-1
chr7_3 exon 6558383 6558621 6558383 ID=Msa1091230-mRNA-1:exon:1945;Parent=Msa1091230-mRNA-1
chr7_3 exon 6558697 6558861 6558697 ID=Msa1091230-mRNA-1:exon:1946;Parent=Msa1091230-mRNA-1
chr7_3 exon 6559191 6559367 6559191 ID=Msa1091230-mRNA-1:exon:1947;Parent=Msa1091230-mRNA-1
chr7_3 exon 6559466 6559531 6559466 ID=Msa1091230-mRNA-1:exon:1948;Parent=Msa1091230-mRNA-1
chr7_3 exon 6560837 6560900 6560837 ID=Msa1091230-mRNA-1:exon:1949;Parent=Msa1091230-mRNA-1
chr7_3 exon 6561558 6562129 6561558 ID=Msa1091230-mRNA-1:exon:1950;Parent=Msa1091230-mRNA-1
chr7_3 five_prime_UTR 6552634 6552832 6552634 ID=Msa1091230-mRNA-1:five_prime_utr;Parent=Msa1091230-mRNA-1
chr7_3 five_prime_UTR 6552940 6552978 6552940 ID=Msa1091230-mRNA-1:five_prime_utr;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6552979 6553224 6552979 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6556376 6556513 6556376 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6556699 6556780 6556699 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6557163 6557236 6557163 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6557334 6557440 6557334 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6557653 6557767 6557653 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6557893 6558009 6557893 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6558294 6558303 6558294 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6558383 6558621 6558383 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6558697 6558861 6558697 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6559191 6559367 6559191 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6559466 6559531 6559466 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6560837 6560900 6560837 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 CDS 6561558 6561814 6561558 ID=Msa1091230-mRNA-1:cds;Parent=Msa1091230-mRNA-1
chr7_3 three_prime_UTR 6561815 6562129 6561815 ID=Msa1091230-mRNA-1:three_prime_utr;Parent=Msa1091230-mRNA-1
Gene Sequence

>Msa1091230

ATGAAGAAATACGAAGCAATAAAGAGTTTTGAAGAGAATGATGAAGATTTGGAAATGGGTCATGAACAAGAACAACAGATCCATGATTCAGCTACAAAGATTATTAATAATGAAGAACTTTCTGCAATGATTTCTTCTTCTTCATCTTCATCAAGAAAACAAGAACAAGAACAACATCAACAACAACAACCTCAAACTTCTCAACGATTGCTTTCACTTGATGTTTTTCGTGGTCTCACTGTTGCGCTTATGATATTGGTGGATGATGCTGGTGGACTTATTCCAGCACTCAATCATTCTCCATGGAATGGTTTAACAATAGCAGACTTTGTTATGCCGTTTTTTCTTTTTATTGTTGGCGTTGCACTAGCATTCACATACAAGAAACCATCTTGCAAAGTTGATGCGACTAGAAAGGCGGTTTTACGGGCGCTTAAGCTTCTTGCATTAGGCATTTTTCTTCAAGGCTATGTTCATCGCGTTAGTGATTTGACGTTTGGAGTGGATTTGAAGCAGATAAGGTTGATGGGAATACTGCAGAGAATTGCGGTAGCATATTTGATTACAGCTCTCTGTGAAATTTGGCTCAAGCGTGAAGATATCGTTAATTCTGGATCATCCCTTTTGAGAAAGTATCGATATCAATGGGCTTTGGCTTTATTTCTATCTGTCATTTATCTTTGCTTGCTGTATGGGATGTACGTTCCCGATTGGGAGTATGAAGTTCCAACAGAACCTTCTTCAGAACCTATGAAATTTTCTGTTAAATGTGGAGTAAGAGGCGACACTGGACCAGCCTGCAATGTCGTTGGAATGATCGATCGTAGCTTGTTGGGTTTACAACATCTATACCGGAGACCAATATATGCACGGGCGCCTAACCAGGCAAAACCGATTCACATTGCTGATCCTTCTCCACCGGACCCCGCGAATTCTCATGTGAAAGAACGCCAAATTGTTGCTGAGAATGTTTATGAGCCTTCTAACCATCATGAAACGCAGATAGTTGCCGAAAATGAAGACACCGTAGAACCTGATTTTCAGTCAAATGAGAATGATGATTCTCAGGCAGCTGAAATCACTTCTCTGTCTCAAAAGGATGCTCCAAAGAAGTCGTATGCATCGATTGTTAAAGTCCCAAAAGGAAATTTGGTACCGGCTAAAGTGTATGTGCCAACTAAAACTGTAAAGAATGTGCCAACTAATACTGTAAAGCAGGCGACAAACAGAACTGAAAGCAAAGTAGTTGAGTCAGTAGAATCTGCTGCAGTGCCTGATGCAGCACCGGATAATGCTTGCAAAACCAAAATATTTTGCAATAACATATGTCTGCTTCTGTTTTTAACAGTCGAGGGACACTCCATTTACATTCGAAATTTGCCGTTAAATGTTACGGTTGCTCAGTTGGAAGCAGAGTTTCAGAAATTTGGACCGATCAAGCCAGGATGCATCCAAGTCAGAAATAATAAGCAGCAGGGATACTGTTTCGGCTTTGTTGAATACCTATCAGTAAATTCAATGAATAATGCAATTCAGGCTTCACCTATTGCTATTGGGGGGCGTCAAGCTGTAGTTGAGATAAAGAGAACCACTGCCCGAGTTGGCGGTGGCACCGGGGGTATTGGAAGACCTAGGTTTCCTTCGGGAAGAAGTGGATTTCGAAATGATTCATTCAGAGGTCGTGGAAATTTCGGTGGTGGTCGGGGCTATGGGCGAAACAATGACCATGGAAACCGAGGTGAGTTTCCTATTAGAGGTCGTGGTCCTAGTGGACGTGGAGAAGGTTATCACCAAGGGAGAGGAAGAGGTGGCGGCCGGTCTAGTGTATTCAAACAAAGTCCCGTTGCCACCGAATGA

Protein sequence

>Msa1091230

MKKYEAIKSFEENDEDLEMGHEQEQQIHDSATKIINNEELSAMISSSSSSSRKQEQEQHQQQQPQTSQRLLSLDVFRGLTVALMILVDDAGGLIPALNHSPWNGLTIADFVMPFFLFIVGVALAFTYKKPSCKVDATRKAVLRALKLLALGIFLQGYVHRVSDLTFGVDLKQIRLMGILQRIAVAYLITALCEIWLKREDIVNSGSSLLRKYRYQWALALFLSVIYLCLLYGMYVPDWEYEVPTEPSSEPMKFSVKCGVRGDTGPACNVVGMIDRSLLGLQHLYRRPIYARAPNQAKPIHIADPSPPDPANSHVKERQIVAENVYEPSNHHETQIVAENEDTVEPDFQSNENDDSQAAEITSLSQKDAPKKSYASIVKVPKGNLVPAKVYVPTKTVKNVPTNTVKQATNRTESKVVESVESAAVPDAAPDNACKTKIFCNNICLLLFLTVEGHSIYIRNLPLNVTVAQLEAEFQKFGPIKPGCIQVRNNKQQGYCFGFVEYLSVNSMNNAIQASPIAIGGRQAVVEIKRTTARVGGGTGGIGRPRFPSGRSGFRNDSFRGRGNFGGGRGYGRNNDHGNRGEFPIRGRGPSGRGEGYHQGRGRGGGRSSVFKQSPVATE*