Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002240 | sp|Q9FVR6|Y1222_ARATH | 67.500 | 40 | 13 | 0 | 41 | 80 | 162 | 201 | 1.16e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0002240 | 0.903109 | 4.868625e-79 | -8.615850e-47 |
| Msa0002240 | Msa0003890 | 0.817942 | 2.538507e-52 | -8.615850e-47 |
| Msa0002240 | Msa0006070 | 0.827610 | 1.422555e-54 | -8.615850e-47 |
| Msa0002240 | Msa0006110 | 0.823861 | 1.102975e-53 | -8.615850e-47 |
| Msa0002240 | Msa0011170 | 0.817250 | 3.635416e-52 | -8.615850e-47 |
| Msa0002240 | Msa0011660 | -0.801290 | 9.653988e-49 | -8.615850e-47 |
| Msa0002240 | Msa0014710 | 0.817553 | 3.107283e-52 | -8.615850e-47 |
| Msa0002240 | Msa0037570 | -0.811630 | 6.359284e-51 | -8.615850e-47 |
| Msa0002240 | Msa0037880 | 0.810430 | 1.157192e-50 | -8.615850e-47 |
| Msa0002240 | Msa0071380 | -0.827168 | 1.815592e-54 | -8.615850e-47 |
| Msa0002240 | Msa0075470 | 0.828480 | 8.783387e-55 | -8.615850e-47 |
| Msa0002240 | Msa0075880 | 0.837292 | 5.666199e-57 | -8.615850e-47 |
| Msa0002240 | Msa0076220 | 0.820384 | 7.056326e-53 | -8.615850e-47 |
| Msa0002240 | Msa0078900 | 0.815000 | 1.156860e-51 | -8.615850e-47 |
| Msa0002240 | Msa0084380 | 0.800362 | 1.493819e-48 | -8.615850e-47 |
| Msa0002240 | Msa0089820 | 0.811279 | 7.581407e-51 | -8.615850e-47 |
| Msa0002240 | Msa0091210 | -0.805466 | 1.316680e-49 | -8.615850e-47 |
| Msa0002240 | Msa0114060 | 0.806114 | 9.627031e-50 | -8.615850e-47 |
| Msa0002240 | Msa0114430 | 0.804466 | 2.131580e-49 | -8.615850e-47 |
| Msa0002240 | Msa0124250 | 0.814564 | 1.444607e-51 | -8.615850e-47 |
| Msa0002240 | Msa0126610 | 0.800119 | 1.673791e-48 | -8.615850e-47 |
| Msa0002240 | Msa0131770 | 0.837119 | 6.274682e-57 | -8.615850e-47 |
| Msa0002240 | Msa0150840 | 0.829489 | 5.001426e-55 | -8.615850e-47 |
| Msa0002240 | Msa0171540 | 0.808166 | 3.539661e-50 | -8.615850e-47 |
| Msa0002240 | Msa0180500 | 0.868838 | 4.847050e-66 | -8.615850e-47 |
| Msa0002240 | Msa0197660 | 0.802499 | 5.450181e-49 | -8.615850e-47 |
| Msa0002240 | Msa0208090 | 0.806910 | 6.538525e-50 | -8.615850e-47 |
| Msa0002240 | Msa0212990 | 0.808096 | 3.663569e-50 | -8.615850e-47 |
| Msa0002240 | Msa0215320 | -0.814903 | 1.215105e-51 | -8.615850e-47 |
| Msa0002240 | Msa0223010 | 0.818022 | 2.434057e-52 | -8.615850e-47 |
| Msa0002240 | Msa0223410 | -0.807650 | 4.557174e-50 | -8.615850e-47 |
| Msa0002240 | Msa0226180 | 0.814750 | 1.314300e-51 | -8.615850e-47 |
| Msa0002240 | Msa0229380 | 0.821659 | 3.589489e-53 | -8.615850e-47 |
| Msa0002240 | Msa0245310 | 0.814732 | 1.326330e-51 | -8.615850e-47 |
| Msa0002240 | Msa0259210 | 0.802799 | 4.725476e-49 | -8.615850e-47 |
| Msa0002240 | Msa0259370 | 0.802861 | 4.588422e-49 | -8.615850e-47 |
| Msa0002240 | Msa0260680 | 0.806690 | 7.278129e-50 | -8.615850e-47 |
| Msa0002240 | Msa0264150 | 0.801456 | 8.925945e-49 | -8.615850e-47 |
| Msa0002240 | Msa0267370 | 0.816927 | 4.295344e-52 | -8.615850e-47 |
| Msa0002240 | Msa0278110 | 0.835532 | 1.588852e-56 | -8.615850e-47 |
| Msa0002240 | Msa0280090 | 0.810888 | 9.215412e-51 | -8.615850e-47 |
| Msa0002240 | Msa0288100 | 0.803685 | 3.098579e-49 | -8.615850e-47 |
| Msa0002240 | Msa0298460 | 0.804236 | 2.379752e-49 | -8.615850e-47 |
| Msa0002240 | Msa0302580 | -0.813865 | 2.061855e-51 | -8.615850e-47 |
| Msa0002240 | Msa0305190 | 0.822150 | 2.763070e-53 | -8.615850e-47 |
| Msa0002240 | Msa0306210 | -0.810038 | 1.405686e-50 | -8.615850e-47 |
| Msa0002240 | Msa0317520 | 0.803344 | 3.646546e-49 | -8.615850e-47 |
| Msa0002240 | Msa0319170 | 0.845729 | 3.387042e-59 | -8.615850e-47 |
| Msa0002240 | Msa0333030 | 0.810724 | 9.998548e-51 | -8.615850e-47 |
| Msa0002240 | Msa0336320 | 0.816105 | 6.563190e-52 | -8.615850e-47 |
| Msa0002240 | Msa0336420 | 0.807813 | 4.208424e-50 | -8.615850e-47 |
| Msa0002240 | Msa0339620 | 0.816164 | 6.366453e-52 | -8.615850e-47 |
| Msa0002240 | Msa0340450 | 0.818158 | 2.267700e-52 | -8.615850e-47 |
| Msa0002240 | Msa0342750 | 0.813689 | 2.254089e-51 | -8.615850e-47 |
| Msa0002240 | Msa0345970 | 0.800397 | 1.469104e-48 | -8.615850e-47 |
| Msa0002240 | Msa0350320 | -0.802739 | 4.863027e-49 | -8.615850e-47 |
| Msa0002240 | Msa0381610 | -0.802189 | 6.314461e-49 | -8.615850e-47 |
| Msa0002240 | Msa0390400 | -0.802473 | 5.516571e-49 | -8.615850e-47 |
| Msa0002240 | Msa0397390 | 0.819531 | 1.106010e-52 | -8.615850e-47 |
| Msa0002240 | Msa0412840 | 0.824897 | 6.290955e-54 | -8.615850e-47 |
| Msa0002240 | Msa0413410 | 0.800909 | 1.155043e-48 | -8.615850e-47 |
| Msa0002240 | Msa0424320 | 0.806693 | 7.265610e-50 | -8.615850e-47 |
| Msa0002240 | Msa0425790 | 0.949859 | 5.411541e-108 | -8.615850e-47 |
| Msa0002240 | Msa0433410 | -0.809620 | 1.729035e-50 | -8.615850e-47 |
| Msa0002240 | Msa0434180 | 0.805823 | 1.108089e-49 | -8.615850e-47 |
| Msa0002240 | Msa0436760 | 0.811298 | 7.508235e-51 | -8.615850e-47 |
| Msa0002240 | Msa0440750 | 0.814620 | 1.404303e-51 | -8.615850e-47 |
| Msa0002240 | Msa0444750 | -0.832525 | 8.995292e-56 | -8.615850e-47 |
| Msa0002240 | Msa0453350 | 0.800820 | 1.204397e-48 | -8.615850e-47 |
| Msa0002240 | Msa0457510 | 0.812624 | 3.861210e-51 | -8.615850e-47 |
| Msa0002240 | Msa0466390 | 0.818617 | 1.785447e-52 | -8.615850e-47 |
| Msa0002240 | Msa0479340 | 0.800320 | 1.523359e-48 | -8.615850e-47 |
| Msa0002240 | Msa0519000 | 0.807519 | 4.859209e-50 | -8.615850e-47 |
| Msa0002240 | Msa0523940 | 0.836611 | 8.455955e-57 | -8.615850e-47 |
| Msa0002240 | Msa0529040 | 0.840992 | 6.226385e-58 | -8.615850e-47 |
| Msa0002240 | Msa0530400 | 0.846062 | 2.749927e-59 | -8.615850e-47 |
| Msa0002240 | Msa0532350 | 0.801979 | 6.973343e-49 | -8.615850e-47 |
| Msa0002240 | Msa0536220 | 0.809430 | 1.899395e-50 | -8.615850e-47 |
| Msa0002240 | Msa0538600 | 0.805522 | 1.281868e-49 | -8.615850e-47 |
| Msa0002240 | Msa0545700 | 0.850497 | 1.634680e-60 | -8.615850e-47 |
| Msa0002240 | Msa0547320 | 0.808957 | 2.399238e-50 | -8.615850e-47 |
| Msa0002240 | Msa0548920 | 0.826343 | 2.858023e-54 | -8.615850e-47 |
| Msa0002240 | Msa0555020 | 0.812412 | 4.294536e-51 | -8.615850e-47 |
| Msa0002240 | Msa0562440 | 0.815977 | 7.011203e-52 | -8.615850e-47 |
| Msa0002240 | Msa0585230 | 0.812664 | 3.782858e-51 | -8.615850e-47 |
| Msa0002240 | Msa0594560 | 0.802639 | 5.098592e-49 | -8.615850e-47 |
| Msa0002240 | Msa0604510 | 0.809368 | 1.959121e-50 | -8.615850e-47 |
| Msa0002240 | Msa0610800 | 0.807443 | 5.041218e-50 | -8.615850e-47 |
| Msa0002240 | Msa0620960 | 0.820422 | 6.917230e-53 | -8.615850e-47 |
| Msa0002240 | Msa0649110 | 0.802178 | 6.344830e-49 | -8.615850e-47 |
| Msa0002240 | Msa0657610 | 0.814514 | 1.482175e-51 | -8.615850e-47 |
| Msa0002240 | Msa0659400 | 0.807531 | 4.830685e-50 | -8.615850e-47 |
| Msa0002240 | Msa0661190 | -0.828854 | 7.133561e-55 | -8.615850e-47 |
| Msa0002240 | Msa0661650 | 0.801358 | 9.348340e-49 | -8.615850e-47 |
| Msa0002240 | Msa0663380 | 0.804337 | 2.267044e-49 | -8.615850e-47 |
| Msa0002240 | Msa0665170 | 0.838187 | 3.337601e-57 | -8.615850e-47 |
| Msa0002240 | Msa0669440 | 0.806686 | 7.290860e-50 | -8.615850e-47 |
| Msa0002240 | Msa0672690 | 0.802282 | 6.042132e-49 | -8.615850e-47 |
| Msa0002240 | Msa0673460 | 0.801044 | 1.084066e-48 | -8.615850e-47 |
| Msa0002240 | Msa0679290 | -0.823760 | 1.164613e-53 | -8.615850e-47 |
| Msa0002240 | Msa0701010 | 0.810750 | 9.866603e-51 | -8.615850e-47 |
| Msa0002240 | Msa0724210 | 0.815588 | 8.562531e-52 | -8.615850e-47 |
| Msa0002240 | Msa0731940 | 0.831288 | 1.817620e-55 | -8.615850e-47 |
| Msa0002240 | Msa0735170 | 0.826026 | 3.399178e-54 | -8.615850e-47 |
| Msa0002240 | Msa0739280 | 0.948915 | 3.649174e-107 | -8.615850e-47 |
| Msa0002240 | Msa0743720 | 0.806915 | 6.523970e-50 | -8.615850e-47 |
| Msa0002240 | Msa0744170 | -0.824488 | 7.856561e-54 | -8.615850e-47 |
| Msa0002240 | Msa0745260 | -0.800382 | 1.479376e-48 | -8.615850e-47 |
| Msa0002240 | Msa0747270 | 0.811105 | 8.267707e-51 | -8.615850e-47 |
| Msa0002240 | Msa0748970 | 0.803518 | 3.355732e-49 | -8.615850e-47 |
| Msa0002240 | Msa0750650 | 0.800164 | 1.638944e-48 | -8.615850e-47 |
| Msa0002240 | Msa0755180 | 0.835046 | 2.107957e-56 | -8.615850e-47 |
| Msa0002240 | Msa0756460 | 0.811501 | 6.783509e-51 | -8.615850e-47 |
| Msa0002240 | Msa0762970 | 0.801756 | 7.749298e-49 | -8.615850e-47 |
| Msa0002240 | Msa0766630 | 0.814485 | 1.503836e-51 | -8.615850e-47 |
| Msa0002240 | Msa0768290 | 0.852655 | 4.003095e-61 | -8.615850e-47 |
| Msa0002240 | Msa0768310 | 0.815439 | 9.239886e-52 | -8.615850e-47 |
| Msa0002240 | Msa0768370 | 0.850634 | 1.495884e-60 | -8.615850e-47 |
| Msa0002240 | Msa0773180 | 0.809541 | 1.798518e-50 | -8.615850e-47 |
| Msa0002240 | Msa0808080 | 0.815178 | 1.055896e-51 | -8.615850e-47 |
| Msa0002240 | Msa0810220 | 0.820122 | 8.105389e-53 | -8.615850e-47 |
| Msa0002240 | Msa0820850 | 0.809739 | 1.630284e-50 | -8.615850e-47 |
| Msa0002240 | Msa0822870 | 0.807417 | 5.106140e-50 | -8.615850e-47 |
| Msa0002240 | Msa0824590 | 0.806929 | 6.479745e-50 | -8.615850e-47 |
| Msa0002240 | Msa0832340 | 0.800191 | 1.618439e-48 | -8.615850e-47 |
| Msa0002240 | Msa0842650 | 0.836216 | 1.065435e-56 | -8.615850e-47 |
| Msa0002240 | Msa0844420 | 0.858543 | 7.664499e-63 | -8.615850e-47 |
| Msa0002240 | Msa0844450 | 0.845532 | 3.829685e-59 | -8.615850e-47 |
| Msa0002240 | Msa0844470 | 0.809136 | 2.195953e-50 | -8.615850e-47 |
| Msa0002240 | Msa0844490 | 0.887117 | 1.891486e-72 | -8.615850e-47 |
| Msa0002240 | Msa0849030 | 0.836379 | 9.687850e-57 | -8.615850e-47 |
| Msa0002240 | Msa0857640 | 0.806831 | 6.793795e-50 | -8.615850e-47 |
| Msa0002240 | Msa0861130 | 0.804412 | 2.187305e-49 | -8.615850e-47 |
| Msa0002240 | Msa0876580 | 0.804353 | 2.250038e-49 | -8.615850e-47 |
| Msa0002240 | Msa0877250 | 0.807278 | 5.465386e-50 | -8.615850e-47 |
| Msa0002240 | Msa0897330 | 0.839922 | 1.186058e-57 | -8.615850e-47 |
| Msa0002240 | Msa0901070 | 0.809858 | 1.537477e-50 | -8.615850e-47 |
| Msa0002240 | Msa0909110 | 0.805443 | 1.331547e-49 | -8.615850e-47 |
| Msa0002240 | Msa0914760 | 0.802444 | 5.593743e-49 | -8.615850e-47 |
| Msa0002240 | Msa0925250 | 0.837946 | 3.850557e-57 | -8.615850e-47 |
| Msa0002240 | Msa0925290 | 0.833961 | 3.947157e-56 | -8.615850e-47 |
| Msa0002240 | Msa0927380 | 0.838949 | 2.121296e-57 | -8.615850e-47 |
| Msa0002240 | Msa0930390 | 0.802362 | 5.816074e-49 | -8.615850e-47 |
| Msa0002240 | Msa0933100 | 0.829406 | 5.241269e-55 | -8.615850e-47 |
| Msa0002240 | Msa0936300 | 0.816406 | 5.622381e-52 | -8.615850e-47 |
| Msa0002240 | Msa0942550 | -0.801380 | 9.254903e-49 | -8.615850e-47 |
| Msa0002240 | Msa0947660 | 0.831368 | 1.736307e-55 | -8.615850e-47 |
| Msa0002240 | Msa0952720 | 0.806007 | 1.013716e-49 | -8.615850e-47 |
| Msa0002240 | Msa0953120 | 0.830208 | 3.341767e-55 | -8.615850e-47 |
| Msa0002240 | Msa0964900 | 0.815918 | 7.226795e-52 | -8.615850e-47 |
| Msa0002240 | Msa0966750 | 0.853040 | 3.107412e-61 | -8.615850e-47 |
| Msa0002240 | Msa0968680 | 0.808017 | 3.806797e-50 | -8.615850e-47 |
| Msa0002240 | Msa0969520 | 0.837958 | 3.823634e-57 | -8.615850e-47 |
| Msa0002240 | Msa0969810 | 0.851180 | 1.049917e-60 | -8.615850e-47 |
| Msa0002240 | Msa0973100 | 0.813737 | 2.199571e-51 | -8.615850e-47 |
| Msa0002240 | Msa0974070 | 0.836134 | 1.117865e-56 | -8.615850e-47 |
| Msa0002240 | Msa0974080 | 0.844090 | 9.377466e-59 | -8.615850e-47 |
| Msa0002240 | Msa0976670 | 0.806192 | 9.270921e-50 | -8.615850e-47 |
| Msa0002240 | Msa0993600 | 0.800407 | 1.462279e-48 | -8.615850e-47 |
| Msa0002240 | Msa0997370 | 0.812412 | 4.294624e-51 | -8.615850e-47 |
| Msa0002240 | Msa0998690 | 0.821036 | 4.998177e-53 | -8.615850e-47 |
| Msa0002240 | Msa1000880 | 0.801394 | 9.191502e-49 | -8.615850e-47 |
| Msa0002240 | Msa1000890 | 0.816798 | 4.593164e-52 | -8.615850e-47 |
| Msa0002240 | Msa1000900 | 0.815606 | 8.481277e-52 | -8.615850e-47 |
| Msa0002240 | Msa1003620 | 0.805600 | 1.234244e-49 | -8.615850e-47 |
| Msa0002240 | Msa1014540 | 0.837352 | 5.469750e-57 | -8.615850e-47 |
| Msa0002240 | Msa1036610 | 0.825996 | 3.455469e-54 | -8.615850e-47 |
| Msa0002240 | Msa1052330 | 0.806807 | 6.875234e-50 | -8.615850e-47 |
| Msa0002240 | Msa1058710 | 0.808426 | 3.115037e-50 | -8.615850e-47 |
| Msa0002240 | Msa1075220 | -0.830381 | 3.032804e-55 | -8.615850e-47 |
| Msa0002240 | Msa1075540 | 0.825797 | 3.852510e-54 | -8.615850e-47 |
| Msa0002240 | Msa1082500 | 0.802085 | 6.630529e-49 | -8.615850e-47 |
| Msa0002240 | Msa1085740 | 0.802878 | 4.550842e-49 | -8.615850e-47 |
| Msa0002240 | Msa1104090 | 0.805214 | 1.486875e-49 | -8.615850e-47 |
| Msa0002240 | Msa1111870 | 0.810795 | 9.652545e-51 | -8.615850e-47 |
| Msa0002240 | Msa1113170 | 0.847527 | 1.093424e-59 | -8.615850e-47 |
| Msa0002240 | Msa1116130 | -0.814916 | 1.207115e-51 | -8.615850e-47 |
| Msa0002240 | Msa1120610 | 0.800718 | 1.263456e-48 | -8.615850e-47 |
| Msa0002240 | Msa1121450 | -0.824319 | 8.610818e-54 | -8.615850e-47 |
| Msa0002240 | Msa1121480 | 0.802349 | 5.851562e-49 | -8.615850e-47 |
| Msa0002240 | Msa1121490 | 0.835438 | 1.677935e-56 | -8.615850e-47 |
| Msa0002240 | Msa1131220 | 0.809169 | 2.160687e-50 | -8.615850e-47 |
| Msa0002240 | Msa1137570 | 0.826522 | 2.590766e-54 | -8.615850e-47 |
| Msa0002240 | Msa1139000 | -0.803844 | 2.871859e-49 | -8.615850e-47 |
| Msa0002240 | Msa1143930 | -0.803275 | 3.767565e-49 | -8.615850e-47 |
| Msa0002240 | Msa1154280 | 0.808470 | 3.049455e-50 | -8.615850e-47 |
| Msa0002240 | Msa1156020 | 0.822483 | 2.312926e-53 | -8.615850e-47 |
| Msa0002240 | Msa1162550 | -0.820746 | 5.827901e-53 | -8.615850e-47 |
| Msa0002240 | Msa1162780 | 0.818351 | 2.051526e-52 | -8.615850e-47 |
| Msa0002240 | Msa1174040 | 0.809453 | 1.878173e-50 | -8.615850e-47 |
| Msa0002240 | Msa1174910 | 0.810311 | 1.227548e-50 | -8.615850e-47 |
| Msa0002240 | Msa1183100 | -0.811776 | 5.910828e-51 | -8.615850e-47 |
| Msa0002240 | Msa1186950 | -0.819305 | 1.245056e-52 | -8.615850e-47 |
| Msa0002240 | Msa1195190 | 0.807452 | 5.019035e-50 | -8.615850e-47 |
| Msa0002240 | Msa1197410 | 0.811121 | 8.203860e-51 | -8.615850e-47 |
| Msa0002240 | Msa1210020 | 0.830371 | 3.049608e-55 | -8.615850e-47 |
| Msa0002240 | Msa1210910 | 0.818820 | 1.605291e-52 | -8.615850e-47 |
| Msa0002240 | Msa1227730 | 0.821900 | 3.157936e-53 | -8.615850e-47 |
| Msa0002240 | Msa1228590 | 0.800590 | 1.342280e-48 | -8.615850e-47 |
| Msa0002240 | Msa1232740 | 0.802165 | 6.384972e-49 | -8.615850e-47 |
| Msa0002240 | Msa1237980 | 0.814786 | 1.290532e-51 | -8.615850e-47 |
| Msa0002240 | Msa1253020 | 0.824792 | 6.663020e-54 | -8.615850e-47 |
| Msa0002240 | Msa1259300 | 0.822503 | 2.287527e-53 | -8.615850e-47 |
| Msa0002240 | Msa1276890 | 0.829147 | 6.055578e-55 | -8.615850e-47 |
| Msa0002240 | Msa1277660 | 0.801587 | 8.390762e-49 | -8.615850e-47 |
| Msa0002240 | Msa1281510 | 0.817556 | 3.101025e-52 | -8.615850e-47 |
| Msa0002240 | Msa1282580 | -0.806771 | 6.997507e-50 | -8.615850e-47 |
| Msa0002240 | Msa1284680 | 0.810695 | 1.014150e-50 | -8.615850e-47 |
| Msa0002240 | Msa1286800 | 0.814263 | 1.684000e-51 | -8.615850e-47 |
| Msa0002240 | Msa1296280 | 0.809132 | 2.200902e-50 | -8.615850e-47 |
| Msa0002240 | Msa1298510 | 0.836390 | 9.624035e-57 | -8.615850e-47 |
| Msa0002240 | Msa1305190 | 0.808062 | 3.724024e-50 | -8.615850e-47 |
| Msa0002240 | Msa1305340 | 0.806311 | 8.747191e-50 | -8.615850e-47 |
| Msa0002240 | Msa1306760 | 0.823561 | 1.296081e-53 | -8.615850e-47 |
| Msa0002240 | Msa1313320 | 0.807977 | 3.883282e-50 | -8.615850e-47 |
| Msa0002240 | Msa1325860 | -0.813400 | 2.609864e-51 | -8.615850e-47 |
| Msa0002240 | Msa1345220 | 0.816360 | 5.757413e-52 | -8.615850e-47 |
| Msa0002240 | Msa1353470 | 0.815353 | 9.656061e-52 | -8.615850e-47 |
| Msa0002240 | Msa1359040 | 0.822587 | 2.186823e-53 | -8.615850e-47 |
| Msa0002240 | Msa1366810 | 0.832374 | 9.802962e-56 | -8.615850e-47 |
| Msa0002240 | Msa1366970 | 0.833974 | 3.918090e-56 | -8.615850e-47 |
| Msa0002240 | Msa1374470 | 0.811486 | 6.834699e-51 | -8.615850e-47 |
| Msa0002240 | Msa1379500 | 0.808788 | 2.607980e-50 | -8.615850e-47 |
| Msa0002240 | Msa1390700 | 0.811549 | 6.621707e-51 | -8.615850e-47 |
| Msa0002240 | Msa1392910 | 0.809152 | 2.179389e-50 | -8.615850e-47 |
| Msa0002240 | Msa1403340 | 0.825052 | 5.782491e-54 | -8.615850e-47 |
| Msa0002240 | Msa1410680 | 0.823582 | 1.281611e-53 | -8.615850e-47 |
| Msa0002240 | Msa1412530 | 0.810967 | 8.855584e-51 | -8.615850e-47 |
| Msa0002240 | Msa1427230 | 0.828779 | 7.437593e-55 | -8.615850e-47 |
| Msa0002240 | Msa1445610 | -0.804432 | 2.166228e-49 | -8.615850e-47 |
| Msa0002240 | Msa1449340 | -0.801835 | 7.464004e-49 | -8.615850e-47 |
| Msa0002240 | Msa1451620 | -0.822992 | 1.760696e-53 | -8.615850e-47 |
| Msa0002240 | Msa1458750 | 0.806112 | 9.633909e-50 | -8.615850e-47 |
| Msa0002240 | Msa1460830 | 0.831771 | 1.381887e-55 | -8.615850e-47 |
| Msa0002240 | Msa1466540 | 0.834853 | 2.356968e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002240 | MtrunA17_Chr5g0410681 | 92.500 | 40 | 3 | 0 | 41 | 80 | 168 | 207 | 6.39e-18 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002240 | AT1G32220.1 | 67.500 | 40 | 13 | 0 | 41 | 80 | 162 | 201 | 1.18e-13 | 64.3 |
Find 47 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCATTGGTTCCTTTAT+TGG | 0.101512 | 1_1:+4084483 | Msa0002240:three_prime_UTR |
| AACTGAGATCAATATGAATT+TGG | 0.138307 | 1_1:-4083330 | None:intergenic |
| TATAGATATCACTCCCTTTA+TGG | 0.158338 | 1_1:+4084401 | Msa0002240:three_prime_UTR |
| TTCTGAAACAATAGGGAATT+TGG | 0.170765 | 1_1:-4083432 | None:intergenic |
| AAGCGAAGATTTACAACTTT+TGG | 0.230576 | 1_1:+4084236 | Msa0002240:three_prime_UTR |
| AAGCGAAGATTTACAACTTT+TGG | 0.230576 | 1_1:+4084305 | Msa0002240:three_prime_UTR |
| TGATTATCACCACCAATTTC+AGG | 0.240753 | 1_1:-4082285 | None:intergenic |
| GCATTTACTAAACCTGAAAT+TGG | 0.301867 | 1_1:+4082273 | Msa0002240:CDS |
| TGCGAGCTAAAACTGTAAAA+AGG | 0.352984 | 1_1:-4084445 | None:intergenic |
| TCAAACCTTCTTCTTGTGCT+TGG | 0.370945 | 1_1:+4083613 | Msa0002240:three_prime_UTR |
| CTGTTATGCGATTACCATAA+AGG | 0.373310 | 1_1:-4084415 | None:intergenic |
| CACTCAGATTCTGAAACAAT+AGG | 0.387450 | 1_1:-4083440 | None:intergenic |
| AATCGTAATTTGCACATCAT+TGG | 0.388810 | 1_1:+4084471 | Msa0002240:three_prime_UTR |
| ACTGAGATCAATATGAATTT+GGG | 0.389375 | 1_1:-4083329 | None:intergenic |
| ATATGTACATCATGTATTTA+CGG | 0.404038 | 1_1:-4084542 | None:intergenic |
| ATGACAGAAATTGCAATTGC+AGG | 0.423174 | 1_1:+4082309 | Msa0002240:CDS |
| TTAAGATATCTTGATAGAAA+AGG | 0.432646 | 1_1:+4082357 | Msa0002240:CDS |
| TGTTATGCGATTACCATAAA+GGG | 0.432717 | 1_1:-4084414 | None:intergenic |
| TGTTTCAGAATCTGAGTGAA+TGG | 0.454782 | 1_1:+4083445 | Msa0002240:exon |
| CTTGATAGAAAAGGCAAGAA+TGG | 0.458584 | 1_1:+4082366 | Msa0002240:CDS |
| CTTGGAACCTCTCTACTTTG+TGG | 0.472185 | 1_1:+4083631 | Msa0002240:three_prime_UTR |
| ACTCAGATTCTGAAACAATA+GGG | 0.475824 | 1_1:-4083439 | None:intergenic |
| TGATTAACACATTACATTGA+AGG | 0.479014 | 1_1:-4084627 | None:intergenic |
| GCAGATATTGACATAATACT+TGG | 0.484723 | 1_1:-4084520 | None:intergenic |
| GTGATATCTATATTTACATC+AGG | 0.488582 | 1_1:-4084390 | None:intergenic |
| AAGAAGAAGGTTTGAAAGGA+TGG | 0.493952 | 1_1:-4083605 | None:intergenic |
| AGGTTCCAAGCACAAGAAGA+AGG | 0.498266 | 1_1:-4083618 | None:intergenic |
| TACATTGAAGGGCAGTATAG+AGG | 0.506979 | 1_1:-4084615 | None:intergenic |
| CTAACACTGTAGGAGGATCA+TGG | 0.537340 | 1_1:-4084180 | None:intergenic |
| ATTTACATCAGGCAAAATGA+AGG | 0.549700 | 1_1:-4084379 | None:intergenic |
| GATTAACACATTACATTGAA+GGG | 0.556845 | 1_1:-4084626 | None:intergenic |
| GCACAAGAAGAAGGTTTGAA+AGG | 0.568007 | 1_1:-4083609 | None:intergenic |
| GGAACCTCTCTACTTTGTGG+TGG | 0.572641 | 1_1:+4083634 | Msa0002240:three_prime_UTR |
| TGTAAATGAGAAACAGCTGC+AGG | 0.575982 | 1_1:+4084132 | Msa0002240:three_prime_UTR |
| TCAACAGCTAACACTGTAGG+AGG | 0.577253 | 1_1:-4084187 | None:intergenic |
| TGTAAATCTTCGCTTAAGCA+AGG | 0.578162 | 1_1:-4084228 | None:intergenic |
| TGTAAATCTTCGCTTAAGCA+AGG | 0.578162 | 1_1:-4084297 | None:intergenic |
| TGTGGTGGCATTGCAAACCT+TGG | 0.582228 | 1_1:+4083649 | Msa0002240:three_prime_UTR |
| TGCGCTTAGCAGTAATAAGA+CGG | 0.601521 | 1_1:-4084069 | None:intergenic |
| ACTTCAACAGCTAACACTGT+AGG | 0.604561 | 1_1:-4084190 | None:intergenic |
| CTTCGCTTAAGCAAGGTCAT+CGG | 0.616870 | 1_1:-4084221 | None:intergenic |
| TTTACTAAACCTGAAATTGG+TGG | 0.617466 | 1_1:+4082276 | Msa0002240:CDS |
| CAGATATTGACATAATACTT+GGG | 0.624252 | 1_1:-4084519 | None:intergenic |
| AATGAGAAACAGCTGCAGGA+AGG | 0.632595 | 1_1:+4084136 | Msa0002240:three_prime_UTR |
| TTTCGTGTGAAGTACCCCGA+TGG | 0.660144 | 1_1:-4083383 | None:intergenic |
| TGGCATTGCAAACCTTGGAG+TGG | 0.662345 | 1_1:+4083654 | Msa0002240:three_prime_UTR |
| AATGCCACCACAAAGTAGAG+AGG | 0.713159 | 1_1:-4083638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATTTAATTTTTCTAC+AGG | + | chr1_1:4083178-4083197 | Msa0002240:intron | 10.0% |
| !!! | ATTAAATTTAATTTTTCTAC+AGG | + | chr1_1:4083178-4083197 | Msa0002240:intron | 10.0% |
| !! | AACACTTAAATACTTAATAT+AGG | - | chr1_1:4082446-4082465 | None:intergenic | 15.0% |
| !! | TGTAACATAAATTATCATTT+AGG | + | chr1_1:4082838-4082857 | Msa0002240:intron | 15.0% |
| !!! | TTTGCTTTATCTAATTTTAA+TGG | - | chr1_1:4082992-4083011 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAATTGCTCTAA+AGG | + | chr1_1:4083242-4083261 | Msa0002240:intron | 15.0% |
| !! | AACACTTAAATACTTAATAT+AGG | - | chr1_1:4082446-4082465 | None:intergenic | 15.0% |
| !! | TGTAACATAAATTATCATTT+AGG | + | chr1_1:4082838-4082857 | Msa0002240:intron | 15.0% |
| !!! | TTTGCTTTATCTAATTTTAA+TGG | - | chr1_1:4082992-4083011 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAATTGCTCTAA+AGG | + | chr1_1:4083242-4083261 | Msa0002240:intron | 15.0% |
| !! | TTAAGATATCTTGATAGAAA+AGG | + | chr1_1:4082357-4082376 | Msa0002240:CDS | 20.0% |
| !!! | GATTTAGATTTTACAAGAAA+TGG | + | chr1_1:4082414-4082433 | Msa0002240:intron | 20.0% |
| !! | GTATTTAAGTGTTTAGTATA+TGG | + | chr1_1:4082453-4082472 | Msa0002240:intron | 20.0% |
| !! | AAAATGATATTGGGAAATTT+AGG | + | chr1_1:4082769-4082788 | Msa0002240:intron | 20.0% |
| !! | AAATTAGATAAAGCAAAAGT+TGG | + | chr1_1:4082995-4083014 | Msa0002240:intron | 20.0% |
| !!! | CAGTGATTATTTTTTTACAT+AGG | - | chr1_1:4083472-4083491 | None:intergenic | 20.0% |
| !!! | TTTAAAATGGAAGTGTTAAT+TGG | - | chr1_1:4083712-4083731 | None:intergenic | 20.0% |
| !! | ATTTAGTTGTTACATAGAAT+AGG | - | chr1_1:4083928-4083947 | None:intergenic | 20.0% |
| !! | ATATGTACATCATGTATTTA+CGG | - | chr1_1:4084545-4084564 | None:intergenic | 20.0% |
| !! | TTAAGATATCTTGATAGAAA+AGG | + | chr1_1:4082357-4082376 | Msa0002240:CDS | 20.0% |
| !!! | GATTTAGATTTTACAAGAAA+TGG | + | chr1_1:4082414-4082433 | Msa0002240:intron | 20.0% |
| !! | GTATTTAAGTGTTTAGTATA+TGG | + | chr1_1:4082453-4082472 | Msa0002240:intron | 20.0% |
| !! | AAAATGATATTGGGAAATTT+AGG | + | chr1_1:4082769-4082788 | Msa0002240:intron | 20.0% |
| !! | AAATTAGATAAAGCAAAAGT+TGG | + | chr1_1:4082995-4083014 | Msa0002240:intron | 20.0% |
| !!! | CAGTGATTATTTTTTTACAT+AGG | - | chr1_1:4083472-4083491 | None:intergenic | 20.0% |
| !!! | TTTAAAATGGAAGTGTTAAT+TGG | - | chr1_1:4083712-4083731 | None:intergenic | 20.0% |
| !! | ATTTAGTTGTTACATAGAAT+AGG | - | chr1_1:4083928-4083947 | None:intergenic | 20.0% |
| !! | ATATGTACATCATGTATTTA+CGG | - | chr1_1:4084545-4084564 | None:intergenic | 20.0% |
| ! | AATAAATTCACAACTTGCAT+TGG | + | chr1_1:4082487-4082506 | Msa0002240:intron | 25.0% |
| ! | ATAAATTCACAACTTGCATT+GGG | + | chr1_1:4082488-4082507 | Msa0002240:intron | 25.0% |
| !! | TAAAATGACACTATTTTGTG+AGG | + | chr1_1:4082512-4082531 | Msa0002240:intron | 25.0% |
| !! | CAACACCTTAATTTATTTCT+AGG | - | chr1_1:4082808-4082827 | None:intergenic | 25.0% |
| ! | TTATCATTTAGGAAACTGAA+TGG | + | chr1_1:4082849-4082868 | Msa0002240:intron | 25.0% |
| ! | TATCATTTAGGAAACTGAAT+GGG | + | chr1_1:4082850-4082869 | Msa0002240:intron | 25.0% |
| ! | TGATACTTTGTTCTATGAAT+GGG | + | chr1_1:4082878-4082897 | Msa0002240:intron | 25.0% |
| ! | ACTGAGATCAATATGAATTT+GGG | - | chr1_1:4083332-4083351 | None:intergenic | 25.0% |
| ! | AACTGAGATCAATATGAATT+TGG | - | chr1_1:4083333-4083352 | None:intergenic | 25.0% |
| !!! | GAAGTGTTAATTGGATTTTA+GGG | - | chr1_1:4083703-4083722 | None:intergenic | 25.0% |
| ! | GAAAATACCTCGATTTAAAA+TGG | - | chr1_1:4083725-4083744 | None:intergenic | 25.0% |
| ! | TAGAAACAAAAAAACACACA+TGG | - | chr1_1:4083768-4083787 | None:intergenic | 25.0% |
| ! | AAAAACAGAACACAAGAAAA+AGG | - | chr1_1:4083791-4083810 | None:intergenic | 25.0% |
| !! | TTTTTCATGTCCATATTACA+AGG | + | chr1_1:4083885-4083904 | Msa0002240:intron | 25.0% |
| !!! | TTTATGAGATTTTGAAGCTA+AGG | + | chr1_1:4083958-4083977 | Msa0002240:intron | 25.0% |
| !!! | TTATGAGATTTTGAAGCTAA+GGG | + | chr1_1:4083959-4083978 | Msa0002240:intron | 25.0% |
| ! | AACAAAGCTGAAAAATCATT+AGG | + | chr1_1:4084091-4084110 | Msa0002240:three_prime_UTR | 25.0% |
| ! | GTGATATCTATATTTACATC+AGG | - | chr1_1:4084393-4084412 | None:intergenic | 25.0% |
| ! | AAAAAAACTGGAACCAATAA+AGG | - | chr1_1:4084499-4084518 | None:intergenic | 25.0% |
| ! | ATAATACTTGGGAAAAAAAC+TGG | - | chr1_1:4084511-4084530 | None:intergenic | 25.0% |
| ! | CAGATATTGACATAATACTT+GGG | - | chr1_1:4084522-4084541 | None:intergenic | 25.0% |
| ! | AATAAATTCACAACTTGCAT+TGG | + | chr1_1:4082487-4082506 | Msa0002240:intron | 25.0% |
| ! | ATAAATTCACAACTTGCATT+GGG | + | chr1_1:4082488-4082507 | Msa0002240:intron | 25.0% |
| !! | TAAAATGACACTATTTTGTG+AGG | + | chr1_1:4082512-4082531 | Msa0002240:intron | 25.0% |
| !! | CAACACCTTAATTTATTTCT+AGG | - | chr1_1:4082808-4082827 | None:intergenic | 25.0% |
| ! | TTATCATTTAGGAAACTGAA+TGG | + | chr1_1:4082849-4082868 | Msa0002240:intron | 25.0% |
| ! | TATCATTTAGGAAACTGAAT+GGG | + | chr1_1:4082850-4082869 | Msa0002240:intron | 25.0% |
| ! | TGATACTTTGTTCTATGAAT+GGG | + | chr1_1:4082878-4082897 | Msa0002240:intron | 25.0% |
| ! | ACTGAGATCAATATGAATTT+GGG | - | chr1_1:4083332-4083351 | None:intergenic | 25.0% |
| ! | AACTGAGATCAATATGAATT+TGG | - | chr1_1:4083333-4083352 | None:intergenic | 25.0% |
| !!! | GAAGTGTTAATTGGATTTTA+GGG | - | chr1_1:4083703-4083722 | None:intergenic | 25.0% |
| ! | GAAAATACCTCGATTTAAAA+TGG | - | chr1_1:4083725-4083744 | None:intergenic | 25.0% |
| ! | TAGAAACAAAAAAACACACA+TGG | - | chr1_1:4083768-4083787 | None:intergenic | 25.0% |
| ! | AAAAACAGAACACAAGAAAA+AGG | - | chr1_1:4083791-4083810 | None:intergenic | 25.0% |
| !! | TTTTTCATGTCCATATTACA+AGG | + | chr1_1:4083885-4083904 | Msa0002240:intron | 25.0% |
| !!! | TTTATGAGATTTTGAAGCTA+AGG | + | chr1_1:4083958-4083977 | Msa0002240:intron | 25.0% |
| !!! | TTATGAGATTTTGAAGCTAA+GGG | + | chr1_1:4083959-4083978 | Msa0002240:intron | 25.0% |
| ! | AACAAAGCTGAAAAATCATT+AGG | + | chr1_1:4084091-4084110 | Msa0002240:three_prime_UTR | 25.0% |
| ! | GTGATATCTATATTTACATC+AGG | - | chr1_1:4084393-4084412 | None:intergenic | 25.0% |
| ! | AAAAAAACTGGAACCAATAA+AGG | - | chr1_1:4084499-4084518 | None:intergenic | 25.0% |
| ! | ATAATACTTGGGAAAAAAAC+TGG | - | chr1_1:4084511-4084530 | None:intergenic | 25.0% |
| ! | CAGATATTGACATAATACTT+GGG | - | chr1_1:4084522-4084541 | None:intergenic | 25.0% |
| GCATTTACTAAACCTGAAAT+TGG | + | chr1_1:4082273-4082292 | Msa0002240:CDS | 30.0% | |
| TTTACTAAACCTGAAATTGG+TGG | + | chr1_1:4082276-4082295 | Msa0002240:CDS | 30.0% | |
| ACGAGTATATGTTTCAAAAC+TGG | + | chr1_1:4082537-4082556 | Msa0002240:intron | 30.0% | |
| CAAAAGTCAGCAAACAATAA+AGG | - | chr1_1:4082581-4082600 | None:intergenic | 30.0% | |
| GGCAAAATTCAGTATGATAA+AGG | + | chr1_1:4082611-4082630 | Msa0002240:intron | 30.0% | |
| TGATAAAGGCAATGTTACAA+AGG | + | chr1_1:4082625-4082644 | Msa0002240:intron | 30.0% | |
| ATACGATCTAAAAGTTGACA+TGG | - | chr1_1:4082709-4082728 | None:intergenic | 30.0% | |
| TCTGTAGGAGAAAATGATAT+TGG | + | chr1_1:4082759-4082778 | Msa0002240:intron | 30.0% | |
| CTGTAGGAGAAAATGATATT+GGG | + | chr1_1:4082760-4082779 | Msa0002240:intron | 30.0% | |
| CGAAGCCTAGAAATAAATTA+AGG | + | chr1_1:4082800-4082819 | Msa0002240:intron | 30.0% | |
| CTGATACTTTGTTCTATGAA+TGG | + | chr1_1:4082877-4082896 | Msa0002240:intron | 30.0% | |
| ATCAAAGTGGAAAGTCTTAA+GGG | + | chr1_1:4082940-4082959 | Msa0002240:intron | 30.0% | |
| !!! | GTGTTTTAGTCTGTAAGAAT+TGG | + | chr1_1:4083017-4083036 | Msa0002240:intron | 30.0% |
| TTAGTCTGTAAGAATTGGAA+TGG | + | chr1_1:4083022-4083041 | Msa0002240:intron | 30.0% | |
| ! | TGTTAGTAGATGTTGATTGA+TGG | + | chr1_1:4083270-4083289 | Msa0002240:intron | 30.0% |
| AAAAAGAAAAGCAGAATCTG+AGG | + | chr1_1:4083403-4083422 | Msa0002240:CDS | 30.0% | |
| !! | TTCTGAAACAATAGGGAATT+TGG | - | chr1_1:4083435-4083454 | None:intergenic | 30.0% |
| !! | ACTCAGATTCTGAAACAATA+GGG | - | chr1_1:4083442-4083461 | None:intergenic | 30.0% |
| ! | GTTGTCAAGTATTCTCTTTT+AGG | + | chr1_1:4083580-4083599 | Msa0002240:three_prime_UTR | 30.0% |
| !!! | GGAAGTGTTAATTGGATTTT+AGG | - | chr1_1:4083704-4083723 | None:intergenic | 30.0% |
| ! | AACACTTCCATTTTAAATCG+AGG | + | chr1_1:4083715-4083734 | Msa0002240:intron | 30.0% |
| AAAGCTGAAAAATCATTAGG+AGG | + | chr1_1:4084094-4084113 | Msa0002240:three_prime_UTR | 30.0% | |
| AAGCTGAAAAATCATTAGGA+GGG | + | chr1_1:4084095-4084114 | Msa0002240:three_prime_UTR | 30.0% | |
| ! | AAGCGAAGATTTACAACTTT+TGG | + | chr1_1:4084236-4084255 | Msa0002240:three_prime_UTR | 30.0% |
| !!! | AACTTTTGGAGTTTGAATTC+TGG | + | chr1_1:4084250-4084269 | Msa0002240:three_prime_UTR | 30.0% |
| ! | AAGCGAAGATTTACAACTTT+TGG | + | chr1_1:4084236-4084255 | Msa0002240:three_prime_UTR | 30.0% |
| !!! | AACTTTTGGAGTTTGAATTC+TGG | + | chr1_1:4084250-4084269 | Msa0002240:three_prime_UTR | 30.0% |
| ATTTACATCAGGCAAAATGA+AGG | - | chr1_1:4084382-4084401 | None:intergenic | 30.0% | |
| TATAGATATCACTCCCTTTA+TGG | + | chr1_1:4084401-4084420 | Msa0002240:three_prime_UTR | 30.0% | |
| TGTTATGCGATTACCATAAA+GGG | - | chr1_1:4084417-4084436 | None:intergenic | 30.0% | |
| ! | AATCGTAATTTGCACATCAT+TGG | + | chr1_1:4084471-4084490 | Msa0002240:three_prime_UTR | 30.0% |
| GCAGATATTGACATAATACT+TGG | - | chr1_1:4084523-4084542 | None:intergenic | 30.0% | |
| GCATTTACTAAACCTGAAAT+TGG | + | chr1_1:4082273-4082292 | Msa0002240:CDS | 30.0% | |
| TTTACTAAACCTGAAATTGG+TGG | + | chr1_1:4082276-4082295 | Msa0002240:CDS | 30.0% | |
| ACGAGTATATGTTTCAAAAC+TGG | + | chr1_1:4082537-4082556 | Msa0002240:intron | 30.0% | |
| CAAAAGTCAGCAAACAATAA+AGG | - | chr1_1:4082581-4082600 | None:intergenic | 30.0% | |
| GGCAAAATTCAGTATGATAA+AGG | + | chr1_1:4082611-4082630 | Msa0002240:intron | 30.0% | |
| TGATAAAGGCAATGTTACAA+AGG | + | chr1_1:4082625-4082644 | Msa0002240:intron | 30.0% | |
| ATACGATCTAAAAGTTGACA+TGG | - | chr1_1:4082709-4082728 | None:intergenic | 30.0% | |
| TCTGTAGGAGAAAATGATAT+TGG | + | chr1_1:4082759-4082778 | Msa0002240:intron | 30.0% | |
| CTGTAGGAGAAAATGATATT+GGG | + | chr1_1:4082760-4082779 | Msa0002240:intron | 30.0% | |
| CGAAGCCTAGAAATAAATTA+AGG | + | chr1_1:4082800-4082819 | Msa0002240:intron | 30.0% | |
| CTGATACTTTGTTCTATGAA+TGG | + | chr1_1:4082877-4082896 | Msa0002240:intron | 30.0% | |
| ATCAAAGTGGAAAGTCTTAA+GGG | + | chr1_1:4082940-4082959 | Msa0002240:intron | 30.0% | |
| !!! | GTGTTTTAGTCTGTAAGAAT+TGG | + | chr1_1:4083017-4083036 | Msa0002240:intron | 30.0% |
| TTAGTCTGTAAGAATTGGAA+TGG | + | chr1_1:4083022-4083041 | Msa0002240:intron | 30.0% | |
| ! | TGTTAGTAGATGTTGATTGA+TGG | + | chr1_1:4083270-4083289 | Msa0002240:intron | 30.0% |
| AAAAAGAAAAGCAGAATCTG+AGG | + | chr1_1:4083403-4083422 | Msa0002240:CDS | 30.0% | |
| !! | TTCTGAAACAATAGGGAATT+TGG | - | chr1_1:4083435-4083454 | None:intergenic | 30.0% |
| !! | ACTCAGATTCTGAAACAATA+GGG | - | chr1_1:4083442-4083461 | None:intergenic | 30.0% |
| ! | GTTGTCAAGTATTCTCTTTT+AGG | + | chr1_1:4083580-4083599 | Msa0002240:three_prime_UTR | 30.0% |
| !!! | GGAAGTGTTAATTGGATTTT+AGG | - | chr1_1:4083704-4083723 | None:intergenic | 30.0% |
| ! | AACACTTCCATTTTAAATCG+AGG | + | chr1_1:4083715-4083734 | Msa0002240:intron | 30.0% |
| AAAGCTGAAAAATCATTAGG+AGG | + | chr1_1:4084094-4084113 | Msa0002240:three_prime_UTR | 30.0% | |
| AAGCTGAAAAATCATTAGGA+GGG | + | chr1_1:4084095-4084114 | Msa0002240:three_prime_UTR | 30.0% | |
| ! | AAGCGAAGATTTACAACTTT+TGG | + | chr1_1:4084236-4084255 | Msa0002240:three_prime_UTR | 30.0% |
| !!! | AACTTTTGGAGTTTGAATTC+TGG | + | chr1_1:4084250-4084269 | Msa0002240:three_prime_UTR | 30.0% |
| ! | AAGCGAAGATTTACAACTTT+TGG | + | chr1_1:4084236-4084255 | Msa0002240:three_prime_UTR | 30.0% |
| !!! | AACTTTTGGAGTTTGAATTC+TGG | + | chr1_1:4084250-4084269 | Msa0002240:three_prime_UTR | 30.0% |
| ATTTACATCAGGCAAAATGA+AGG | - | chr1_1:4084382-4084401 | None:intergenic | 30.0% | |
| TATAGATATCACTCCCTTTA+TGG | + | chr1_1:4084401-4084420 | Msa0002240:three_prime_UTR | 30.0% | |
| TGTTATGCGATTACCATAAA+GGG | - | chr1_1:4084417-4084436 | None:intergenic | 30.0% | |
| ! | AATCGTAATTTGCACATCAT+TGG | + | chr1_1:4084471-4084490 | Msa0002240:three_prime_UTR | 30.0% |
| GCAGATATTGACATAATACT+TGG | - | chr1_1:4084523-4084542 | None:intergenic | 30.0% | |
| TGATTATCACCACCAATTTC+AGG | - | chr1_1:4082288-4082307 | None:intergenic | 35.0% | |
| ATGACAGAAATTGCAATTGC+AGG | + | chr1_1:4082309-4082328 | Msa0002240:CDS | 35.0% | |
| CTTGATAGAAAAGGCAAGAA+TGG | + | chr1_1:4082366-4082385 | Msa0002240:CDS | 35.0% | |
| !! | GCTGACTTTTGTTTCAAAAG+TGG | + | chr1_1:4082590-4082609 | Msa0002240:intron | 35.0% |
| CATCAAAGTGGAAAGTCTTA+AGG | + | chr1_1:4082939-4082958 | Msa0002240:intron | 35.0% | |
| CAAAAAGGTGGAAGTTTCTT+TGG | - | chr1_1:4083052-4083071 | None:intergenic | 35.0% | |
| ! | CAAAGAAACTTCCACCTTTT+TGG | + | chr1_1:4083050-4083069 | Msa0002240:intron | 35.0% |
| !! | AGTTTGTTCTTTTACCTTGC+AGG | + | chr1_1:4083302-4083321 | Msa0002240:intron | 35.0% |
| !! | ACCATCGTTTTTACTTCCAT+CGG | + | chr1_1:4083367-4083386 | Msa0002240:CDS | 35.0% |
| !! | CACTCAGATTCTGAAACAAT+AGG | - | chr1_1:4083443-4083462 | None:intergenic | 35.0% |
| TGTTTCAGAATCTGAGTGAA+TGG | + | chr1_1:4083445-4083464 | Msa0002240:exon | 35.0% | |
| AAGAAGAAGGTTTGAAAGGA+TGG | - | chr1_1:4083608-4083627 | None:intergenic | 35.0% | |
| TTCATGTCCATATTACAAGG+CGG | + | chr1_1:4083888-4083907 | Msa0002240:intron | 35.0% | |
| ATTTGAACCGCCTTGTAATA+TGG | - | chr1_1:4083898-4083917 | None:intergenic | 35.0% | |
| GTAACAACTAAATGCTGCAA+CGG | + | chr1_1:4083935-4083954 | Msa0002240:intron | 35.0% | |
| AGCTGAAAAATCATTAGGAG+GGG | + | chr1_1:4084096-4084115 | Msa0002240:three_prime_UTR | 35.0% | |
| AAAAATCATTAGGAGGGGAT+TGG | + | chr1_1:4084101-4084120 | Msa0002240:three_prime_UTR | 35.0% | |
| TGTAAATCTTCGCTTAAGCA+AGG | - | chr1_1:4084231-4084250 | None:intergenic | 35.0% | |
| TGTAAATCTTCGCTTAAGCA+AGG | - | chr1_1:4084231-4084250 | None:intergenic | 35.0% | |
| CTGTTATGCGATTACCATAA+AGG | - | chr1_1:4084418-4084437 | None:intergenic | 35.0% | |
| TGCGAGCTAAAACTGTAAAA+AGG | - | chr1_1:4084448-4084467 | None:intergenic | 35.0% | |
| !! | CACATCATTGGTTCCTTTAT+TGG | + | chr1_1:4084483-4084502 | Msa0002240:three_prime_UTR | 35.0% |
| TGATTATCACCACCAATTTC+AGG | - | chr1_1:4082288-4082307 | None:intergenic | 35.0% | |
| ATGACAGAAATTGCAATTGC+AGG | + | chr1_1:4082309-4082328 | Msa0002240:CDS | 35.0% | |
| CTTGATAGAAAAGGCAAGAA+TGG | + | chr1_1:4082366-4082385 | Msa0002240:CDS | 35.0% | |
| !! | GCTGACTTTTGTTTCAAAAG+TGG | + | chr1_1:4082590-4082609 | Msa0002240:intron | 35.0% |
| CATCAAAGTGGAAAGTCTTA+AGG | + | chr1_1:4082939-4082958 | Msa0002240:intron | 35.0% | |
| CAAAAAGGTGGAAGTTTCTT+TGG | - | chr1_1:4083052-4083071 | None:intergenic | 35.0% | |
| ! | CAAAGAAACTTCCACCTTTT+TGG | + | chr1_1:4083050-4083069 | Msa0002240:intron | 35.0% |
| !! | AGTTTGTTCTTTTACCTTGC+AGG | + | chr1_1:4083302-4083321 | Msa0002240:intron | 35.0% |
| !! | ACCATCGTTTTTACTTCCAT+CGG | + | chr1_1:4083367-4083386 | Msa0002240:CDS | 35.0% |
| !! | CACTCAGATTCTGAAACAAT+AGG | - | chr1_1:4083443-4083462 | None:intergenic | 35.0% |
| TGTTTCAGAATCTGAGTGAA+TGG | + | chr1_1:4083445-4083464 | Msa0002240:exon | 35.0% | |
| AAGAAGAAGGTTTGAAAGGA+TGG | - | chr1_1:4083608-4083627 | None:intergenic | 35.0% | |
| TTCATGTCCATATTACAAGG+CGG | + | chr1_1:4083888-4083907 | Msa0002240:intron | 35.0% | |
| ATTTGAACCGCCTTGTAATA+TGG | - | chr1_1:4083898-4083917 | None:intergenic | 35.0% | |
| GTAACAACTAAATGCTGCAA+CGG | + | chr1_1:4083935-4083954 | Msa0002240:intron | 35.0% | |
| AGCTGAAAAATCATTAGGAG+GGG | + | chr1_1:4084096-4084115 | Msa0002240:three_prime_UTR | 35.0% | |
| AAAAATCATTAGGAGGGGAT+TGG | + | chr1_1:4084101-4084120 | Msa0002240:three_prime_UTR | 35.0% | |
| TGTAAATCTTCGCTTAAGCA+AGG | - | chr1_1:4084231-4084250 | None:intergenic | 35.0% | |
| TGTAAATCTTCGCTTAAGCA+AGG | - | chr1_1:4084231-4084250 | None:intergenic | 35.0% | |
| CTGTTATGCGATTACCATAA+AGG | - | chr1_1:4084418-4084437 | None:intergenic | 35.0% | |
| TGCGAGCTAAAACTGTAAAA+AGG | - | chr1_1:4084448-4084467 | None:intergenic | 35.0% | |
| !! | CACATCATTGGTTCCTTTAT+TGG | + | chr1_1:4084483-4084502 | Msa0002240:three_prime_UTR | 35.0% |
| TACAAAGGCTGCTTCATCTA+AGG | + | chr1_1:4082640-4082659 | Msa0002240:intron | 40.0% | |
| ACAAAGGCTGCTTCATCTAA+GGG | + | chr1_1:4082641-4082660 | Msa0002240:intron | 40.0% | |
| ACATGAGAGCAAGAATGACA+AGG | + | chr1_1:4082734-4082753 | Msa0002240:intron | 40.0% | |
| CATGAGAGCAAGAATGACAA+GGG | + | chr1_1:4082735-4082754 | Msa0002240:intron | 40.0% | |
| AAGAATGACAAGGGTTCTGT+AGG | + | chr1_1:4082744-4082763 | Msa0002240:intron | 40.0% | |
| GATCGCAATGAACATCAAAG+TGG | + | chr1_1:4082927-4082946 | Msa0002240:intron | 40.0% | |
| GAGCTTTCTTTCCAAAAAGG+TGG | - | chr1_1:4083064-4083083 | None:intergenic | 40.0% | |
| CACGAGCTTTCTTTCCAAAA+AGG | - | chr1_1:4083067-4083086 | None:intergenic | 40.0% | |
| !! | CTTTTTGGAAAGAAAGCTCG+TGG | + | chr1_1:4083065-4083084 | Msa0002240:intron | 40.0% |
| TGAATTTGGGAATTCCTGCA+AGG | - | chr1_1:4083319-4083338 | None:intergenic | 40.0% | |
| !! | CCATCGTTTTTACTTCCATC+GGG | + | chr1_1:4083368-4083387 | Msa0002240:CDS | 40.0% |
| !! | CATCGTTTTTACTTCCATCG+GGG | + | chr1_1:4083369-4083388 | Msa0002240:CDS | 40.0% |
| GCACAAGAAGAAGGTTTGAA+AGG | - | chr1_1:4083612-4083631 | None:intergenic | 40.0% | |
| TCAAACCTTCTTCTTGTGCT+TGG | + | chr1_1:4083613-4083632 | Msa0002240:three_prime_UTR | 40.0% | |
| !! | CATATTTTTGCTCCACTCCA+AGG | - | chr1_1:4083669-4083688 | None:intergenic | 40.0% |
| TGCGCTTAGCAGTAATAAGA+CGG | - | chr1_1:4084072-4084091 | None:intergenic | 40.0% | |
| TGTAAATGAGAAACAGCTGC+AGG | + | chr1_1:4084132-4084151 | Msa0002240:three_prime_UTR | 40.0% | |
| ACTTCAACAGCTAACACTGT+AGG | - | chr1_1:4084193-4084212 | None:intergenic | 40.0% | |
| TACATTGAAGGGCAGTATAG+AGG | - | chr1_1:4084618-4084637 | None:intergenic | 40.0% | |
| TACAAAGGCTGCTTCATCTA+AGG | + | chr1_1:4082640-4082659 | Msa0002240:intron | 40.0% | |
| ACAAAGGCTGCTTCATCTAA+GGG | + | chr1_1:4082641-4082660 | Msa0002240:intron | 40.0% | |
| ACATGAGAGCAAGAATGACA+AGG | + | chr1_1:4082734-4082753 | Msa0002240:intron | 40.0% | |
| CATGAGAGCAAGAATGACAA+GGG | + | chr1_1:4082735-4082754 | Msa0002240:intron | 40.0% | |
| AAGAATGACAAGGGTTCTGT+AGG | + | chr1_1:4082744-4082763 | Msa0002240:intron | 40.0% | |
| GATCGCAATGAACATCAAAG+TGG | + | chr1_1:4082927-4082946 | Msa0002240:intron | 40.0% | |
| GAGCTTTCTTTCCAAAAAGG+TGG | - | chr1_1:4083064-4083083 | None:intergenic | 40.0% | |
| CACGAGCTTTCTTTCCAAAA+AGG | - | chr1_1:4083067-4083086 | None:intergenic | 40.0% | |
| !! | CTTTTTGGAAAGAAAGCTCG+TGG | + | chr1_1:4083065-4083084 | Msa0002240:intron | 40.0% |
| TGAATTTGGGAATTCCTGCA+AGG | - | chr1_1:4083319-4083338 | None:intergenic | 40.0% | |
| !! | CCATCGTTTTTACTTCCATC+GGG | + | chr1_1:4083368-4083387 | Msa0002240:CDS | 40.0% |
| !! | CATCGTTTTTACTTCCATCG+GGG | + | chr1_1:4083369-4083388 | Msa0002240:CDS | 40.0% |
| GCACAAGAAGAAGGTTTGAA+AGG | - | chr1_1:4083612-4083631 | None:intergenic | 40.0% | |
| TCAAACCTTCTTCTTGTGCT+TGG | + | chr1_1:4083613-4083632 | Msa0002240:three_prime_UTR | 40.0% | |
| !! | CATATTTTTGCTCCACTCCA+AGG | - | chr1_1:4083669-4083688 | None:intergenic | 40.0% |
| TGCGCTTAGCAGTAATAAGA+CGG | - | chr1_1:4084072-4084091 | None:intergenic | 40.0% | |
| TGTAAATGAGAAACAGCTGC+AGG | + | chr1_1:4084132-4084151 | Msa0002240:three_prime_UTR | 40.0% | |
| ACTTCAACAGCTAACACTGT+AGG | - | chr1_1:4084193-4084212 | None:intergenic | 40.0% | |
| TACATTGAAGGGCAGTATAG+AGG | - | chr1_1:4084618-4084637 | None:intergenic | 40.0% | |
| GGAAAGTCTTAAGGGAAGTG+CGG | + | chr1_1:4082948-4082967 | Msa0002240:intron | 45.0% | |
| CCCGATGGAAGTAAAAACGA+TGG | - | chr1_1:4083371-4083390 | None:intergenic | 45.0% | |
| AGGTTCCAAGCACAAGAAGA+AGG | - | chr1_1:4083621-4083640 | None:intergenic | 45.0% | |
| CTTGGAACCTCTCTACTTTG+TGG | + | chr1_1:4083631-4083650 | Msa0002240:three_prime_UTR | 45.0% | |
| AATGCCACCACAAAGTAGAG+AGG | - | chr1_1:4083641-4083660 | None:intergenic | 45.0% | |
| AATGAGAAACAGCTGCAGGA+AGG | + | chr1_1:4084136-4084155 | Msa0002240:three_prime_UTR | 45.0% | |
| CTAACACTGTAGGAGGATCA+TGG | - | chr1_1:4084183-4084202 | None:intergenic | 45.0% | |
| TCAACAGCTAACACTGTAGG+AGG | - | chr1_1:4084190-4084209 | None:intergenic | 45.0% | |
| CTTCGCTTAAGCAAGGTCAT+CGG | - | chr1_1:4084224-4084243 | None:intergenic | 45.0% | |
| GGAAAGTCTTAAGGGAAGTG+CGG | + | chr1_1:4082948-4082967 | Msa0002240:intron | 45.0% | |
| CCCGATGGAAGTAAAAACGA+TGG | - | chr1_1:4083371-4083390 | None:intergenic | 45.0% | |
| AGGTTCCAAGCACAAGAAGA+AGG | - | chr1_1:4083621-4083640 | None:intergenic | 45.0% | |
| CTTGGAACCTCTCTACTTTG+TGG | + | chr1_1:4083631-4083650 | Msa0002240:three_prime_UTR | 45.0% | |
| AATGCCACCACAAAGTAGAG+AGG | - | chr1_1:4083641-4083660 | None:intergenic | 45.0% | |
| AATGAGAAACAGCTGCAGGA+AGG | + | chr1_1:4084136-4084155 | Msa0002240:three_prime_UTR | 45.0% | |
| CTAACACTGTAGGAGGATCA+TGG | - | chr1_1:4084183-4084202 | None:intergenic | 45.0% | |
| TCAACAGCTAACACTGTAGG+AGG | - | chr1_1:4084190-4084209 | None:intergenic | 45.0% | |
| CTTCGCTTAAGCAAGGTCAT+CGG | - | chr1_1:4084224-4084243 | None:intergenic | 45.0% | |
| ! | TTTCGTGTGAAGTACCCCGA+TGG | - | chr1_1:4083386-4083405 | None:intergenic | 50.0% |
| GGAACCTCTCTACTTTGTGG+TGG | + | chr1_1:4083634-4083653 | Msa0002240:three_prime_UTR | 50.0% | |
| TGTGGTGGCATTGCAAACCT+TGG | + | chr1_1:4083649-4083668 | Msa0002240:three_prime_UTR | 50.0% | |
| TGGCATTGCAAACCTTGGAG+TGG | + | chr1_1:4083654-4083673 | Msa0002240:three_prime_UTR | 50.0% | |
| ! | TTTCGTGTGAAGTACCCCGA+TGG | - | chr1_1:4083386-4083405 | None:intergenic | 50.0% |
| GGAACCTCTCTACTTTGTGG+TGG | + | chr1_1:4083634-4083653 | Msa0002240:three_prime_UTR | 50.0% | |
| TGTGGTGGCATTGCAAACCT+TGG | + | chr1_1:4083649-4083668 | Msa0002240:three_prime_UTR | 50.0% | |
| TGGCATTGCAAACCTTGGAG+TGG | + | chr1_1:4083654-4083673 | Msa0002240:three_prime_UTR | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 4082267 | 4084638 | 4082267 | ID=Msa0002240;Name=Msa0002240 |
| chr1_1 | mRNA | 4082267 | 4084638 | 4082267 | ID=Msa0002240-mRNA-1;Parent=Msa0002240;Name=Msa0002240-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|1|0.66|1|0.5|0.66|3|861|86 |
| chr1_1 | exon | 4082267 | 4082387 | 4082267 | ID=Msa0002240-mRNA-1:exon:1224;Parent=Msa0002240-mRNA-1 |
| chr1_1 | exon | 4083324 | 4083693 | 4083324 | ID=Msa0002240-mRNA-1:exon:1225;Parent=Msa0002240-mRNA-1 |
| chr1_1 | exon | 4084008 | 4084638 | 4084008 | ID=Msa0002240-mRNA-1:exon:1226;Parent=Msa0002240-mRNA-1 |
| chr1_1 | CDS | 4082267 | 4082387 | 4082267 | ID=Msa0002240-mRNA-1:cds;Parent=Msa0002240-mRNA-1 |
| chr1_1 | CDS | 4083324 | 4083463 | 4083324 | ID=Msa0002240-mRNA-1:cds;Parent=Msa0002240-mRNA-1 |
| chr1_1 | three_prime_UTR | 4083464 | 4083693 | 4083464 | ID=Msa0002240-mRNA-1:three_prime_utr;Parent=Msa0002240-mRNA-1 |
| chr1_1 | three_prime_UTR | 4084008 | 4084638 | 4084008 | ID=Msa0002240-mRNA-1:three_prime_utr;Parent=Msa0002240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
