Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070242.t1 | KCW52694.1 | 100 | 103 | 0 | 0 | 1 | 103 | 4 | 106 | 7.50E-48 | 199.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070242.t1 | P62785 | 100.0 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 1.8e-50 | 199.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070242.t1 | M5VRN0 | 100.0 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 5.4e-48 | 199.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene070242 | 0.841381 | 4.92E-58 | -1.69E-46 |
MS.gene049159 | MS.gene070242 | 0.870382 | 1.52E-66 | -1.69E-46 |
MS.gene049255 | MS.gene070242 | 0.829127 | 6.12E-55 | -1.69E-46 |
MS.gene049341 | MS.gene070242 | 0.823034 | 1.72E-53 | -1.69E-46 |
MS.gene049368 | MS.gene070242 | 0.80518 | 1.51E-49 | -1.69E-46 |
MS.gene049501 | MS.gene070242 | 0.822591 | 2.18E-53 | -1.69E-46 |
MS.gene049821 | MS.gene070242 | 0.88193 | 1.59E-70 | -1.69E-46 |
MS.gene049850 | MS.gene070242 | 0.833521 | 5.08E-56 | -1.69E-46 |
MS.gene050020 | MS.gene070242 | 0.853838 | 1.83E-61 | -1.69E-46 |
MS.gene050442 | MS.gene070242 | 0.80276 | 4.81E-49 | -1.69E-46 |
MS.gene05045 | MS.gene070242 | 0.801947 | 7.08E-49 | -1.69E-46 |
MS.gene050689 | MS.gene070242 | 0.866203 | 3.39E-65 | -1.69E-46 |
MS.gene050807 | MS.gene070242 | 0.829353 | 5.40E-55 | -1.69E-46 |
MS.gene050815 | MS.gene070242 | 0.848619 | 5.46E-60 | -1.69E-46 |
MS.gene050838 | MS.gene070242 | 0.807665 | 4.52E-50 | -1.69E-46 |
MS.gene050901 | MS.gene070242 | 0.851442 | 8.85E-61 | -1.69E-46 |
MS.gene051102 | MS.gene070242 | 0.808434 | 3.10E-50 | -1.69E-46 |
MS.gene051198 | MS.gene070242 | 0.80141 | 9.13E-49 | -1.69E-46 |
MS.gene051243 | MS.gene070242 | 0.819042 | 1.43E-52 | -1.69E-46 |
MS.gene051247 | MS.gene070242 | 0.84226 | 2.88E-58 | -1.69E-46 |
MS.gene051328 | MS.gene070242 | 0.875933 | 2.08E-68 | -1.69E-46 |
MS.gene05134 | MS.gene070242 | 0.810041 | 1.40E-50 | -1.69E-46 |
MS.gene05157 | MS.gene070242 | 0.844164 | 8.96E-59 | -1.69E-46 |
MS.gene051664 | MS.gene070242 | 0.806971 | 6.35E-50 | -1.69E-46 |
MS.gene051700 | MS.gene070242 | 0.825891 | 3.66E-54 | -1.69E-46 |
MS.gene051719 | MS.gene070242 | 0.854677 | 1.05E-61 | -1.69E-46 |
MS.gene051720 | MS.gene070242 | 0.852234 | 5.28E-61 | -1.69E-46 |
MS.gene051744 | MS.gene070242 | 0.817594 | 3.04E-52 | -1.69E-46 |
MS.gene051975 | MS.gene070242 | 0.803598 | 3.23E-49 | -1.69E-46 |
MS.gene052012 | MS.gene070242 | 0.832563 | 8.80E-56 | -1.69E-46 |
MS.gene052020 | MS.gene070242 | 0.828186 | 1.03E-54 | -1.69E-46 |
MS.gene052133 | MS.gene070242 | 0.847106 | 1.43E-59 | -1.69E-46 |
MS.gene052323 | MS.gene070242 | 0.803189 | 3.93E-49 | -1.69E-46 |
MS.gene052397 | MS.gene070242 | 0.806094 | 9.72E-50 | -1.69E-46 |
MS.gene052516 | MS.gene070242 | 0.855125 | 7.78E-62 | -1.69E-46 |
MS.gene052519 | MS.gene070242 | 0.822027 | 2.95E-53 | -1.69E-46 |
MS.gene052611 | MS.gene070242 | 0.831318 | 1.79E-55 | -1.69E-46 |
MS.gene052665 | MS.gene070242 | 0.837655 | 4.57E-57 | -1.69E-46 |
MS.gene052773 | MS.gene070242 | 0.819301 | 1.25E-52 | -1.69E-46 |
MS.gene052863 | MS.gene070242 | 0.834771 | 2.47E-56 | -1.69E-46 |
MS.gene052896 | MS.gene070242 | 0.831519 | 1.59E-55 | -1.69E-46 |
MS.gene052947 | MS.gene070242 | 0.808765 | 2.64E-50 | -1.69E-46 |
MS.gene053008 | MS.gene070242 | 0.854553 | 1.14E-61 | -1.69E-46 |
MS.gene053144 | MS.gene070242 | 0.802112 | 6.55E-49 | -1.69E-46 |
MS.gene053226 | MS.gene070242 | 0.856769 | 2.57E-62 | -1.69E-46 |
MS.gene053563 | MS.gene070242 | 0.810658 | 1.03E-50 | -1.69E-46 |
MS.gene053581 | MS.gene070242 | 0.837475 | 5.09E-57 | -1.69E-46 |
MS.gene053599 | MS.gene070242 | 0.811546 | 6.63E-51 | -1.69E-46 |
MS.gene05364 | MS.gene070242 | 0.836221 | 1.06E-56 | -1.69E-46 |
MS.gene054236 | MS.gene070242 | 0.800782 | 1.23E-48 | -1.69E-46 |
MS.gene054472 | MS.gene070242 | 0.815523 | 8.85E-52 | -1.69E-46 |
MS.gene054584 | MS.gene070242 | 0.800159 | 1.64E-48 | -1.69E-46 |
MS.gene05458 | MS.gene070242 | 0.801769 | 7.70E-49 | -1.69E-46 |
MS.gene05462 | MS.gene070242 | 0.832037 | 1.19E-55 | -1.69E-46 |
MS.gene054651 | MS.gene070242 | 0.806596 | 7.62E-50 | -1.69E-46 |
MS.gene054775 | MS.gene070242 | 0.806463 | 8.13E-50 | -1.69E-46 |
MS.gene05517 | MS.gene070242 | 0.83895 | 2.12E-57 | -1.69E-46 |
MS.gene055465 | MS.gene070242 | 0.86042 | 2.09E-63 | -1.69E-46 |
MS.gene055466 | MS.gene070242 | 0.878713 | 2.25E-69 | -1.69E-46 |
MS.gene055468 | MS.gene070242 | 0.862796 | 3.93E-64 | -1.69E-46 |
MS.gene055469 | MS.gene070242 | 0.820023 | 8.54E-53 | -1.69E-46 |
MS.gene055512 | MS.gene070242 | 0.83351 | 5.12E-56 | -1.69E-46 |
MS.gene055513 | MS.gene070242 | 0.827099 | 1.89E-54 | -1.69E-46 |
MS.gene055580 | MS.gene070242 | -0.832285 | 1.03E-55 | -1.69E-46 |
MS.gene055623 | MS.gene070242 | 0.811214 | 7.83E-51 | -1.69E-46 |
MS.gene055778 | MS.gene070242 | 0.830022 | 3.71E-55 | -1.69E-46 |
MS.gene055818 | MS.gene070242 | 0.836729 | 7.89E-57 | -1.69E-46 |
MS.gene055926 | MS.gene070242 | 0.813258 | 2.80E-51 | -1.69E-46 |
MS.gene056043 | MS.gene070242 | -0.821851 | 3.24E-53 | -1.69E-46 |
MS.gene05604 | MS.gene070242 | 0.815286 | 9.99E-52 | -1.69E-46 |
MS.gene05608 | MS.gene070242 | 0.838613 | 2.59E-57 | -1.69E-46 |
MS.gene056173 | MS.gene070242 | 0.806482 | 8.05E-50 | -1.69E-46 |
MS.gene056174 | MS.gene070242 | 0.803367 | 3.61E-49 | -1.69E-46 |
MS.gene056215 | MS.gene070242 | 0.882518 | 9.74E-71 | -1.69E-46 |
MS.gene056308 | MS.gene070242 | 0.834144 | 3.55E-56 | -1.69E-46 |
MS.gene056366 | MS.gene070242 | 0.807939 | 3.96E-50 | -1.69E-46 |
MS.gene056595 | MS.gene070242 | 0.83423 | 3.38E-56 | -1.69E-46 |
MS.gene056760 | MS.gene070242 | 0.807671 | 4.51E-50 | -1.69E-46 |
MS.gene057034 | MS.gene070242 | 0.81081 | 9.58E-51 | -1.69E-46 |
MS.gene057060 | MS.gene070242 | 0.801528 | 8.63E-49 | -1.69E-46 |
MS.gene057140 | MS.gene070242 | 0.803898 | 2.80E-49 | -1.69E-46 |
MS.gene057294 | MS.gene070242 | 0.800336 | 1.51E-48 | -1.69E-46 |
MS.gene057444 | MS.gene070242 | 0.827714 | 1.34E-54 | -1.69E-46 |
MS.gene057446 | MS.gene070242 | 0.832649 | 8.38E-56 | -1.69E-46 |
MS.gene057693 | MS.gene070242 | 0.858544 | 7.66E-63 | -1.69E-46 |
MS.gene057694 | MS.gene070242 | 0.81065 | 1.04E-50 | -1.69E-46 |
MS.gene057705 | MS.gene070242 | 0.811835 | 5.74E-51 | -1.69E-46 |
MS.gene057915 | MS.gene070242 | 0.840702 | 7.41E-58 | -1.69E-46 |
MS.gene058010 | MS.gene070242 | 0.80794 | 3.95E-50 | -1.69E-46 |
MS.gene058084 | MS.gene070242 | 0.807378 | 5.21E-50 | -1.69E-46 |
MS.gene058339 | MS.gene070242 | 0.810106 | 1.36E-50 | -1.69E-46 |
MS.gene05847 | MS.gene070242 | 0.809346 | 1.98E-50 | -1.69E-46 |
MS.gene058625 | MS.gene070242 | 0.824579 | 7.48E-54 | -1.69E-46 |
MS.gene058636 | MS.gene070242 | 0.805897 | 1.07E-49 | -1.69E-46 |
MS.gene058646 | MS.gene070242 | 0.804452 | 2.15E-49 | -1.69E-46 |
MS.gene058906 | MS.gene070242 | 0.823336 | 1.46E-53 | -1.69E-46 |
MS.gene058976 | MS.gene070242 | 0.823199 | 1.57E-53 | -1.69E-46 |
MS.gene058979 | MS.gene070242 | 0.811917 | 5.51E-51 | -1.69E-46 |
MS.gene059151 | MS.gene070242 | 0.818179 | 2.24E-52 | -1.69E-46 |
MS.gene059625 | MS.gene070242 | 0.811472 | 6.88E-51 | -1.69E-46 |
MS.gene05978 | MS.gene070242 | 0.835548 | 1.57E-56 | -1.69E-46 |
MS.gene059842 | MS.gene070242 | 0.858276 | 9.21E-63 | -1.69E-46 |
MS.gene059937 | MS.gene070242 | 0.841698 | 4.06E-58 | -1.69E-46 |
MS.gene060194 | MS.gene070242 | 0.800167 | 1.64E-48 | -1.69E-46 |
MS.gene060310 | MS.gene070242 | 0.825625 | 4.23E-54 | -1.69E-46 |
MS.gene060429 | MS.gene070242 | 0.857813 | 1.26E-62 | -1.69E-46 |
MS.gene060587 | MS.gene070242 | 0.850643 | 1.49E-60 | -1.69E-46 |
MS.gene060803 | MS.gene070242 | 0.868434 | 6.55E-66 | -1.69E-46 |
MS.gene061176 | MS.gene070242 | 0.814952 | 1.19E-51 | -1.69E-46 |
MS.gene061177 | MS.gene070242 | 0.814083 | 1.85E-51 | -1.69E-46 |
MS.gene061178 | MS.gene070242 | 0.814597 | 1.42E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070242.t1 | MTR_7g029510 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_7g099610 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_5g063620 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_4g061827 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_4g061920 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g462400 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g054380 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g462730 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g462510 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g070920 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g061440 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_3g462410 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_2g096100 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_8g038460 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene070242.t1 | MTR_4g128150 | 100.000 | 102 | 0 | 0 | 1 | 102 | 1 | 102 | 1.67e-66 | 204 |
MS.gene070242.t1 | MTR_7g029520 | 84.000 | 50 | 8 | 0 | 27 | 76 | 1 | 50 | 2.15e-21 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070242.t1 | AT5G59970 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT5G59690 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT5G59970 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT3G46320 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT3G45930 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT3G53730 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT2G28740 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT1G07660 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT1G07820 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT1G07820 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene070242.t1 | AT1G07660 | 83.495 | 103 | 0 | 1 | 1 | 103 | 1 | 86 | 4.34e-51 | 155 |
Find 32 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGCAGGGAAGGACTCTTTA+TGG | 0.247348 | 8.2:+6155719 | MS.gene070242:CDS |
GGAAGGACTCTTTATGGATT+TGG | 0.297351 | 8.2:+6155725 | MS.gene070242:CDS |
TCCTTTGCCTCTTCCTGACA+TGG | 0.418595 | 8.2:-6155441 | None:intergenic |
TCTTTATGGATTTGGCGGTT+AGG | 0.439485 | 8.2:+6155733 | MS.gene070242:CDS |
GGCAAAGGAGGAAAGGGTCT+TGG | 0.446329 | 8.2:+6155455 | MS.gene070242:CDS |
CAAGAATTCACAGCCATGTC+AGG | 0.481900 | 8.2:+6155428 | None:intergenic |
CGTTTACGCTCTCAAGAGGC+AGG | 0.488613 | 8.2:+6155703 | MS.gene070242:CDS |
GGTTCTTCGCGATAACATCC+AGG | 0.500175 | 8.2:+6155505 | MS.gene070242:CDS |
AGGACTCTTTATGGATTTGG+CGG | 0.509079 | 8.2:+6155728 | MS.gene070242:CDS |
GGAGGAAAGGGTCTTGGAAA+GGG | 0.511441 | 8.2:+6155461 | MS.gene070242:CDS |
TCGCAGGCTTCGTGATTCCC+TGG | 0.511861 | 8.2:-6155523 | None:intergenic |
AGGAAGAGGCAAAGGAGGAA+AGG | 0.518412 | 8.2:+6155448 | MS.gene070242:CDS |
GGAAGAGGCAAAGGAGGAAA+GGG | 0.527098 | 8.2:+6155449 | MS.gene070242:CDS |
CCATCGCAGTAACAGTCTTA+CGG | 0.545551 | 8.2:-6155676 | None:intergenic |
GCCATGTCAGGAAGAGGCAA+AGG | 0.547501 | 8.2:+6155440 | None:intergenic |
AGGAGGAAAGGGTCTTGGAA+AGG | 0.553664 | 8.2:+6155460 | MS.gene070242:CDS |
CCGTAAGACTGTTACTGCGA+TGG | 0.561095 | 8.2:+6155676 | MS.gene070242:CDS |
CTTGCGAGACGACGAATCGC+AGG | 0.571080 | 8.2:-6155539 | None:intergenic |
TTCACAGCCATGTCAGGAAG+AGG | 0.573281 | 8.2:+6155434 | None:intergenic |
AGGAGCAAAACGACACCGTA+AGG | 0.575994 | 8.2:+6155484 | MS.gene070242:CDS |
TGTTATCGCGAAGAACCTTA+CGG | 0.576355 | 8.2:-6155499 | None:intergenic |
ATGTCAGGAAGAGGCAAAGG+AGG | 0.581057 | 8.2:+6155443 | MS.gene070242:CDS |
ACGCTCTCAAGAGGCAGGGA+AGG | 0.583359 | 8.2:+6155708 | MS.gene070242:CDS |
ACGGCGAGCATGCTCTGTGT+AGG | 0.590446 | 8.2:-6155657 | None:intergenic |
GGAAAGGGTCTTGGAAAGGG+AGG | 0.621886 | 8.2:+6155464 | MS.gene070242:CDS |
ATTCGTCGTCTCGCAAGACG+TGG | 0.624267 | 8.2:+6155545 | MS.gene070242:CDS |
TTAATCTATGAAGAAACTCG+TGG | 0.634992 | 8.2:+6155590 | MS.gene070242:CDS |
ATGTCGTTTACGCTCTCAAG+AGG | 0.636714 | 8.2:+6155699 | MS.gene070242:CDS |
CGTCGTCTCGCAAGACGTGG+TGG | 0.642630 | 8.2:+6155548 | MS.gene070242:CDS |
GTTCTTCGCGATAACATCCA+GGG | 0.657095 | 8.2:+6155506 | MS.gene070242:CDS |
GTTTACGCTCTCAAGAGGCA+GGG | 0.663401 | 8.2:+6155704 | MS.gene070242:CDS |
GGTGGTGTGAAGCGTATCAG+TGG | 0.669421 | 8.2:+6155566 | MS.gene070242:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
TTAATCTATGAAGAAACTCG+TGG | + | chr8.2:6155590-6155609 | MS.gene070242:CDS | 30.0% | |
AGGACTCTTTATGGATTTGG+CGG | + | chr8.2:6155728-6155747 | MS.gene070242:CDS | 40.0% | |
GGAAGGACTCTTTATGGATT+TGG | + | chr8.2:6155725-6155744 | MS.gene070242:CDS | 40.0% | |
TGTTATCGCGAAGAACCTTA+CGG | - | chr8.2:6155502-6155521 | None:intergenic | 40.0% | |
CCATCGCAGTAACAGTCTTA+CGG | - | chr8.2:6155679-6155698 | None:intergenic | 45.0% | |
GTTCTTCGCGATAACATCCA+GGG | + | chr8.2:6155506-6155525 | MS.gene070242:CDS | 45.0% | |
! | ATGTCGTTTACGCTCTCAAG+AGG | + | chr8.2:6155699-6155718 | MS.gene070242:CDS | 45.0% |
AGGAAGAGGCAAAGGAGGAA+AGG | + | chr8.2:6155448-6155467 | MS.gene070242:CDS | 50.0% | |
AGGAGCAAAACGACACCGTA+AGG | + | chr8.2:6155484-6155503 | MS.gene070242:CDS | 50.0% | |
AGGAGGAAAGGGTCTTGGAA+AGG | + | chr8.2:6155460-6155479 | MS.gene070242:CDS | 50.0% | |
AGGCAGGGAAGGACTCTTTA+TGG | + | chr8.2:6155719-6155738 | MS.gene070242:CDS | 50.0% | |
ATGTCAGGAAGAGGCAAAGG+AGG | + | chr8.2:6155443-6155462 | MS.gene070242:CDS | 50.0% | |
CCGTAAGACTGTTACTGCGA+TGG | + | chr8.2:6155676-6155695 | MS.gene070242:CDS | 50.0% | |
GGAAGAGGCAAAGGAGGAAA+GGG | + | chr8.2:6155449-6155468 | MS.gene070242:CDS | 50.0% | |
GGAGGAAAGGGTCTTGGAAA+GGG | + | chr8.2:6155461-6155480 | MS.gene070242:CDS | 50.0% | |
GGTTCTTCGCGATAACATCC+AGG | + | chr8.2:6155505-6155524 | MS.gene070242:CDS | 50.0% | |
GTTTACGCTCTCAAGAGGCA+GGG | + | chr8.2:6155704-6155723 | MS.gene070242:CDS | 50.0% | |
ATTCGTCGTCTCGCAAGACG+TGG | + | chr8.2:6155545-6155564 | MS.gene070242:CDS | 55.0% | |
CGTTTACGCTCTCAAGAGGC+AGG | + | chr8.2:6155703-6155722 | MS.gene070242:CDS | 55.0% | |
GGAAAGGGTCTTGGAAAGGG+AGG | + | chr8.2:6155464-6155483 | MS.gene070242:CDS | 55.0% | |
GGCAAAGGAGGAAAGGGTCT+TGG | + | chr8.2:6155455-6155474 | MS.gene070242:CDS | 55.0% | |
GGTGGTGTGAAGCGTATCAG+TGG | + | chr8.2:6155566-6155585 | MS.gene070242:CDS | 55.0% | |
ACGCTCTCAAGAGGCAGGGA+AGG | + | chr8.2:6155708-6155727 | MS.gene070242:CDS | 60.0% | |
ACGGCGAGCATGCTCTGTGT+AGG | - | chr8.2:6155660-6155679 | None:intergenic | 60.0% | |
CTTGCGAGACGACGAATCGC+AGG | - | chr8.2:6155542-6155561 | None:intergenic | 60.0% | |
TCGCAGGCTTCGTGATTCCC+TGG | - | chr8.2:6155526-6155545 | None:intergenic | 60.0% | |
CGTCGTCTCGCAAGACGTGG+TGG | + | chr8.2:6155548-6155567 | MS.gene070242:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 6155443 | 6155754 | 6155443 | ID=MS.gene070242 |
chr8.2 | mRNA | 6155443 | 6155754 | 6155443 | ID=MS.gene070242.t1;Parent=MS.gene070242 |
chr8.2 | exon | 6155443 | 6155754 | 6155443 | ID=MS.gene070242.t1.exon1;Parent=MS.gene070242.t1 |
chr8.2 | CDS | 6155443 | 6155754 | 6155443 | ID=cds.MS.gene070242.t1;Parent=MS.gene070242.t1 |
Gene Sequence |
Protein sequence |