Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38127.t1 | XP_003618057.1 | 92.7 | 96 | 7 | 0 | 1 | 96 | 1 | 96 | 1.00E-39 | 172.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38127.t1 | G7K0N1 | 92.7 | 96 | 7 | 0 | 1 | 96 | 1 | 96 | 7.4e-40 | 172.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38127 | 0.836757 | 7.76E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene38127 | 0.914051 | 3.01E-84 | -1.69E-46 |
| MS.gene049173 | MS.gene38127 | 0.8626 | 4.52E-64 | -1.69E-46 |
| MS.gene049217 | MS.gene38127 | 0.866542 | 2.64E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene38127 | 0.882948 | 6.79E-71 | -1.69E-46 |
| MS.gene049285 | MS.gene38127 | 0.907524 | 4.62E-81 | -1.69E-46 |
| MS.gene049320 | MS.gene38127 | 0.893245 | 7.52E-75 | -1.69E-46 |
| MS.gene04939 | MS.gene38127 | 0.842154 | 3.08E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene38127 | 0.822181 | 2.72E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene38127 | 0.863464 | 2.44E-64 | -1.69E-46 |
| MS.gene049633 | MS.gene38127 | 0.878727 | 2.22E-69 | -1.69E-46 |
| MS.gene049634 | MS.gene38127 | -0.800793 | 1.22E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene38127 | 0.861639 | 8.91E-64 | -1.69E-46 |
| MS.gene05010 | MS.gene38127 | 0.833036 | 6.72E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene38127 | 0.892922 | 1.02E-74 | -1.69E-46 |
| MS.gene050165 | MS.gene38127 | 0.892877 | 1.06E-74 | -1.69E-46 |
| MS.gene050170 | MS.gene38127 | 0.801763 | 7.72E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene38127 | 0.850475 | 1.66E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene38127 | 0.888408 | 6.06E-73 | -1.69E-46 |
| MS.gene050338 | MS.gene38127 | -0.809467 | 1.87E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene38127 | 0.893218 | 7.71E-75 | -1.69E-46 |
| MS.gene050475 | MS.gene38127 | -0.800556 | 1.36E-48 | -1.69E-46 |
| MS.gene050496 | MS.gene38127 | 0.803707 | 3.07E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene38127 | 0.885425 | 8.22E-72 | -1.69E-46 |
| MS.gene050518 | MS.gene38127 | 0.878576 | 2.51E-69 | -1.69E-46 |
| MS.gene050538 | MS.gene38127 | 0.826093 | 3.28E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene38127 | 0.853184 | 2.83E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene38127 | 0.840808 | 6.96E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene38127 | 0.909558 | 4.99E-82 | -1.69E-46 |
| MS.gene050675 | MS.gene38127 | 0.863055 | 3.27E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene38127 | 0.879844 | 8.94E-70 | -1.69E-46 |
| MS.gene050747 | MS.gene38127 | 0.836143 | 1.11E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene38127 | 0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene050770 | MS.gene38127 | 0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene38127 | 0.873595 | 1.30E-67 | -1.69E-46 |
| MS.gene05079 | MS.gene38127 | -0.815123 | 1.09E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene38127 | 0.880732 | 4.31E-70 | -1.69E-46 |
| MS.gene05081 | MS.gene38127 | 0.847975 | 8.23E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene38127 | 0.849438 | 3.23E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene38127 | 0.843633 | 1.24E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene38127 | 0.811776 | 5.91E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene38127 | 0.826052 | 3.35E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene38127 | 0.827261 | 1.73E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene38127 | 0.869628 | 2.69E-66 | -1.69E-46 |
| MS.gene05100 | MS.gene38127 | 0.847729 | 9.62E-60 | -1.69E-46 |
| MS.gene051138 | MS.gene38127 | -0.81563 | 8.38E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene38127 | 0.89403 | 3.62E-75 | -1.69E-46 |
| MS.gene051317 | MS.gene38127 | 0.870478 | 1.42E-66 | -1.69E-46 |
| MS.gene051434 | MS.gene38127 | 0.808336 | 3.26E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene38127 | 0.836478 | 9.14E-57 | -1.69E-46 |
| MS.gene051617 | MS.gene38127 | 0.851901 | 6.56E-61 | -1.69E-46 |
| MS.gene051651 | MS.gene38127 | -0.817446 | 3.28E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene38127 | 0.884806 | 1.40E-71 | -1.69E-46 |
| MS.gene051694 | MS.gene38127 | 0.80343 | 3.50E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene38127 | 0.809288 | 2.04E-50 | -1.69E-46 |
| MS.gene051749 | MS.gene38127 | -0.803618 | 3.20E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene38127 | 0.879649 | 1.05E-69 | -1.69E-46 |
| MS.gene051838 | MS.gene38127 | 0.852587 | 4.19E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene38127 | 0.842661 | 2.26E-58 | -1.69E-46 |
| MS.gene051874 | MS.gene38127 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene38127 | 0.879037 | 1.73E-69 | -1.69E-46 |
| MS.gene052050 | MS.gene38127 | -0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene052129 | MS.gene38127 | -0.845262 | 4.53E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene38127 | 0.840795 | 7.01E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene38127 | 0.848216 | 7.06E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene38127 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene38127 | 0.86617 | 3.47E-65 | -1.69E-46 |
| MS.gene052482 | MS.gene38127 | 0.808975 | 2.38E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene38127 | 0.822183 | 2.71E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene38127 | 0.811614 | 6.41E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene38127 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene052504 | MS.gene38127 | 0.802212 | 6.24E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene38127 | 0.841585 | 4.35E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene38127 | 0.843568 | 1.29E-58 | -1.69E-46 |
| MS.gene052820 | MS.gene38127 | 0.813121 | 3.00E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene38127 | 0.850977 | 1.20E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene38127 | 0.816622 | 5.03E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene38127 | 0.819693 | 1.02E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene38127 | 0.883809 | 3.28E-71 | -1.69E-46 |
| MS.gene052872 | MS.gene38127 | 0.887961 | 9.00E-73 | -1.69E-46 |
| MS.gene052916 | MS.gene38127 | 0.820472 | 6.74E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene38127 | 0.847103 | 1.43E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene38127 | 0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene38127 | 0.841262 | 5.29E-58 | -1.69E-46 |
| MS.gene053104 | MS.gene38127 | 0.877555 | 5.72E-69 | -1.69E-46 |
| MS.gene053107 | MS.gene38127 | 0.816091 | 6.61E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene38127 | 0.846408 | 2.21E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene38127 | 0.867314 | 1.50E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene38127 | 0.849743 | 2.66E-60 | -1.69E-46 |
| MS.gene053284 | MS.gene38127 | 0.855284 | 7.00E-62 | -1.69E-46 |
| MS.gene053285 | MS.gene38127 | 0.847923 | 8.50E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene38127 | 0.847452 | 1.15E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene38127 | 0.84289 | 1.96E-58 | -1.69E-46 |
| MS.gene053384 | MS.gene38127 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene38127 | 0.822555 | 2.23E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene38127 | 0.81025 | 1.27E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene38127 | -0.801929 | 7.14E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene38127 | 0.822199 | 2.69E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene38127 | 0.882426 | 1.05E-70 | -1.69E-46 |
| MS.gene053824 | MS.gene38127 | 0.865803 | 4.53E-65 | -1.69E-46 |
| MS.gene053916 | MS.gene38127 | 0.882028 | 1.47E-70 | -1.69E-46 |
| MS.gene054408 | MS.gene38127 | 0.809739 | 1.63E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene38127 | 0.839148 | 1.88E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene38127 | 0.88581 | 5.90E-72 | -1.69E-46 |
| MS.gene054642 | MS.gene38127 | 0.90955 | 5.03E-82 | -1.69E-46 |
| MS.gene054706 | MS.gene38127 | -0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene38127 | 0.85629 | 3.55E-62 | -1.69E-46 |
| MS.gene054884 | MS.gene38127 | -0.815993 | 6.95E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene38127 | 0.882543 | 9.54E-71 | -1.69E-46 |
| MS.gene054959 | MS.gene38127 | -0.800524 | 1.38E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene38127 | 0.808975 | 2.38E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene38127 | 0.89263 | 1.33E-74 | -1.69E-46 |
| MS.gene055212 | MS.gene38127 | 0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene38127 | 0.848334 | 6.55E-60 | -1.69E-46 |
| MS.gene055289 | MS.gene38127 | 0.823313 | 1.48E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene38127 | 0.887682 | 1.15E-72 | -1.69E-46 |
| MS.gene055397 | MS.gene38127 | 0.839969 | 1.15E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene38127 | 0.807242 | 5.56E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene38127 | 0.893457 | 6.18E-75 | -1.69E-46 |
| MS.gene055577 | MS.gene38127 | 0.894689 | 1.95E-75 | -1.69E-46 |
| MS.gene055636 | MS.gene38127 | 0.838134 | 3.45E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene38127 | 0.845164 | 4.82E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene38127 | 0.819979 | 8.74E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene38127 | 0.847566 | 1.07E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene38127 | 0.905278 | 5.08E-80 | -1.69E-46 |
| MS.gene055750 | MS.gene38127 | 0.859415 | 4.20E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene38127 | 0.897338 | 1.55E-76 | -1.69E-46 |
| MS.gene055776 | MS.gene38127 | 0.832923 | 7.16E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene38127 | 0.852474 | 4.51E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene38127 | 0.860848 | 1.55E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene38127 | 0.875908 | 2.13E-68 | -1.69E-46 |
| MS.gene055956 | MS.gene38127 | -0.847369 | 1.21E-59 | -1.69E-46 |
| MS.gene056083 | MS.gene38127 | 0.821447 | 4.02E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene38127 | 0.862653 | 4.35E-64 | -1.69E-46 |
| MS.gene056449 | MS.gene38127 | 0.807612 | 4.64E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene38127 | 0.812632 | 3.85E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene38127 | 0.857185 | 1.94E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene38127 | 0.861054 | 1.34E-63 | -1.69E-46 |
| MS.gene056549 | MS.gene38127 | 0.822978 | 1.77E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene38127 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene38127 | 0.889413 | 2.48E-73 | -1.69E-46 |
| MS.gene056678 | MS.gene38127 | -0.814387 | 1.58E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene38127 | 0.870003 | 2.03E-66 | -1.69E-46 |
| MS.gene056856 | MS.gene38127 | -0.823523 | 1.32E-53 | -1.69E-46 |
| MS.gene056857 | MS.gene38127 | -0.802761 | 4.81E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene38127 | 0.827725 | 1.33E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene38127 | 0.842595 | 2.35E-58 | -1.69E-46 |
| MS.gene056903 | MS.gene38127 | 0.825199 | 5.34E-54 | -1.69E-46 |
| MS.gene056946 | MS.gene38127 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene38127 | 0.810274 | 1.25E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene38127 | 0.833598 | 4.86E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene38127 | 0.804482 | 2.12E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene38127 | 0.884276 | 2.20E-71 | -1.69E-46 |
| MS.gene057196 | MS.gene38127 | 0.834401 | 3.06E-56 | -1.69E-46 |
| MS.gene057246 | MS.gene38127 | 0.870332 | 1.58E-66 | -1.69E-46 |
| MS.gene057331 | MS.gene38127 | 0.853104 | 2.98E-61 | -1.69E-46 |
| MS.gene057332 | MS.gene38127 | 0.840828 | 6.87E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene38127 | 0.868315 | 7.16E-66 | -1.69E-46 |
| MS.gene05753 | MS.gene38127 | 0.805095 | 1.57E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene38127 | 0.875212 | 3.68E-68 | -1.69E-46 |
| MS.gene057831 | MS.gene38127 | 0.837638 | 4.62E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene38127 | 0.806563 | 7.74E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene38127 | 0.805007 | 1.64E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene38127 | 0.83289 | 7.30E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene38127 | 0.800151 | 1.65E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene38127 | 0.835351 | 1.77E-56 | -1.69E-46 |
| MS.gene058158 | MS.gene38127 | -0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene058323 | MS.gene38127 | 0.810863 | 9.33E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene38127 | -0.825832 | 3.78E-54 | -1.69E-46 |
| MS.gene058335 | MS.gene38127 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene38127 | 0.83039 | 3.02E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene38127 | 0.832624 | 8.50E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene38127 | 0.918267 | 1.92E-86 | -1.69E-46 |
| MS.gene058544 | MS.gene38127 | 0.872939 | 2.16E-67 | -1.69E-46 |
| MS.gene058603 | MS.gene38127 | -0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene38127 | 0.875136 | 3.91E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene38127 | 0.892268 | 1.86E-74 | -1.69E-46 |
| MS.gene058838 | MS.gene38127 | 0.895589 | 8.30E-76 | -1.69E-46 |
| MS.gene059022 | MS.gene38127 | 0.883414 | 4.58E-71 | -1.69E-46 |
| MS.gene059023 | MS.gene38127 | 0.887573 | 1.27E-72 | -1.69E-46 |
| MS.gene059029 | MS.gene38127 | 0.852825 | 3.58E-61 | -1.69E-46 |
| MS.gene059079 | MS.gene38127 | 0.857751 | 1.32E-62 | -1.69E-46 |
| MS.gene059102 | MS.gene38127 | -0.805708 | 1.17E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene38127 | 0.841578 | 4.36E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene38127 | 0.851449 | 8.81E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene38127 | 0.860493 | 1.99E-63 | -1.69E-46 |
| MS.gene059526 | MS.gene38127 | -0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene38127 | 0.810857 | 9.36E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene38127 | 0.807219 | 5.63E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene38127 | 0.90736 | 5.51E-81 | -1.69E-46 |
| MS.gene059718 | MS.gene38127 | 0.884574 | 1.71E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene38127 | 0.842888 | 1.96E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene38127 | 0.824317 | 8.62E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene38127 | 0.857637 | 1.43E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene38127 | 0.841663 | 4.14E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene38127 | 0.858663 | 7.06E-63 | -1.69E-46 |
| MS.gene060193 | MS.gene38127 | 0.815052 | 1.13E-51 | -1.69E-46 |
| MS.gene060341 | MS.gene38127 | 0.82757 | 1.45E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene38127 | 0.845186 | 4.75E-59 | -1.69E-46 |
| MS.gene060727 | MS.gene38127 | 0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene38127 | 0.837839 | 4.10E-57 | -1.69E-46 |
| MS.gene060762 | MS.gene38127 | 0.896483 | 3.53E-76 | -1.69E-46 |
| MS.gene06077 | MS.gene38127 | 0.846027 | 2.81E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene38127 | 0.831217 | 1.89E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene38127 | 0.848753 | 5.01E-60 | -1.69E-46 |
| MS.gene060823 | MS.gene38127 | -0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene38127 | 0.830593 | 2.69E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene38127 | 0.882016 | 1.48E-70 | -1.69E-46 |
| MS.gene060982 | MS.gene38127 | 0.863089 | 3.19E-64 | -1.69E-46 |
| MS.gene061041 | MS.gene38127 | 0.826379 | 2.80E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene38127 | 0.91039 | 1.98E-82 | -1.69E-46 |
| MS.gene061200 | MS.gene38127 | 0.836605 | 8.48E-57 | -1.69E-46 |
| MS.gene061231 | MS.gene38127 | 0.816726 | 4.77E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38127.t1 | MTR_5g098530 | 92.708 | 96 | 7 | 0 | 1 | 96 | 1 | 96 | 1.26e-52 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38127.t1 | AT4G13500 | 73.214 | 56 | 15 | 0 | 41 | 96 | 48 | 103 | 2.46e-24 | 91.3 |
| MS.gene38127.t1 | AT2G05310 | 71.429 | 56 | 16 | 0 | 41 | 96 | 48 | 103 | 3.48e-24 | 90.9 |
Find 24 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTATATTATCTTATT+TGG | 0.144829 | 5.1:-79173234 | MS.gene38127:intron |
| CGCTTGCGGCAGTGTAATTT+TGG | 0.238006 | 5.1:-79171978 | MS.gene38127:CDS |
| ATCAAAGTTTGTGCTCAATT+AGG | 0.317774 | 5.1:-79173592 | MS.gene38127:intron |
| TTTGTTATTACATACTGTTC+TGG | 0.320587 | 5.1:+79173377 | None:intergenic |
| TGAGAAAGTGAAGATGATTT+AGG | 0.339562 | 5.1:+79173649 | None:intergenic |
| ATACCAAATAAGATAATATA+AGG | 0.355873 | 5.1:+79173231 | None:intergenic |
| TAAGGAAGTGGCGTCATCAT+TGG | 0.409790 | 5.1:+79173249 | None:intergenic |
| TACACTGCCGCAAGCGACTA+AGG | 0.429889 | 5.1:+79171985 | None:intergenic |
| AGAAGATAGAAGAGTTACTT+TGG | 0.480230 | 5.1:+79173699 | None:intergenic |
| TACAGATATTGGCAGTCAGC+AGG | 0.495903 | 5.1:-79173291 | MS.gene38127:intron |
| TAGAAGAGTTACTTTGGCTA+TGG | 0.509481 | 5.1:+79173705 | None:intergenic |
| AAGAGTTACTTTGGCTATGG+TGG | 0.517669 | 5.1:+79173708 | None:intergenic |
| ATCTACACCTTAGTCGCTTG+CGG | 0.523454 | 5.1:-79171992 | MS.gene38127:CDS |
| TCACTAACTTTCACTGCGTA+GGG | 0.546971 | 5.1:+79171902 | None:intergenic |
| AGCACAAACTTTGATACCAA+GGG | 0.547969 | 5.1:+79173600 | None:intergenic |
| AGCGACTAAGGTGTAGATCA+AGG | 0.555002 | 5.1:+79171997 | None:intergenic |
| AATAAGATAATATAAGGAAG+TGG | 0.555321 | 5.1:+79173237 | None:intergenic |
| GCAGAATACAATGAATTCAC+CGG | 0.576375 | 5.1:-79171956 | MS.gene38127:CDS |
| TTCACTAACTTTCACTGCGT+AGG | 0.589826 | 5.1:+79171901 | None:intergenic |
| CGAGATGAAGAAACCAAGAA+AGG | 0.593391 | 5.1:-79173434 | MS.gene38127:CDS |
| CAGTCAGCAGGAGAGAGAGA+AGG | 0.609827 | 5.1:-79173279 | MS.gene38127:CDS |
| CTGAATGTTAGTCAAGCTAC+CGG | 0.614514 | 5.1:+79171937 | None:intergenic |
| GAGCACAAACTTTGATACCA+AGG | 0.618661 | 5.1:+79173599 | None:intergenic |
| CTAACTTTCACTGCGTAGGG+AGG | 0.636821 | 5.1:+79171905 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAACTAGATA+TGG | - | chr5.1:79173227-79173246 | MS.gene38127:intron | 10.0% |
| !!! | TTAGACAATATTTTTTTATA+AGG | - | chr5.1:79173327-79173346 | MS.gene38127:intron | 10.0% |
| !! | AAATTGTTTATAAATATGAC+TGG | + | chr5.1:79172689-79172708 | None:intergenic | 15.0% |
| !! | ATACCAAATAAGATAATATA+AGG | + | chr5.1:79172376-79172395 | None:intergenic | 15.0% |
| !! | GTTATACTATATGATTAATA+TGG | - | chr5.1:79172117-79172136 | MS.gene38127:intron | 15.0% |
| !!! | TAGTTTTTTTTTTTTTTGAG+AGG | + | chr5.1:79173223-79173242 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACTAGATATGG+AGG | - | chr5.1:79173230-79173249 | MS.gene38127:intron | 20.0% |
| !! | AATAAGATAATATAAGGAAG+TGG | + | chr5.1:79172370-79172389 | None:intergenic | 20.0% |
| !! | CTTCCTTATATTATCTTATT+TGG | - | chr5.1:79172370-79172389 | MS.gene38127:intron | 20.0% |
| !! | TACTATTAGTGAAATTGTTA+AGG | - | chr5.1:79173103-79173122 | MS.gene38127:intron | 20.0% |
| !! | TGTTGGTATATATTTGTATT+AGG | - | chr5.1:79172143-79172162 | MS.gene38127:intron | 20.0% |
| !!! | AATTTTGTTTTGAACATCAT+CGG | - | chr5.1:79173040-79173059 | MS.gene38127:intron | 20.0% |
| !!! | TAAATGTTCAATTTTGTAGA+TGG | + | chr5.1:79172853-79172872 | None:intergenic | 20.0% |
| !!! | TTACTTTTTCACATATGTAA+CGG | - | chr5.1:79172581-79172600 | MS.gene38127:intron | 20.0% |
| ! | AAGAAGAATATGTAATAAGG+AGG | + | chr5.1:79173467-79173486 | None:intergenic | 25.0% |
| ! | AGAAGAATATGTAATAAGGA+GGG | + | chr5.1:79173466-79173485 | None:intergenic | 25.0% |
| ! | CAAAACATATACATATCGTT+TGG | - | chr5.1:79172722-79172741 | MS.gene38127:intron | 25.0% |
| ! | CACTTTGATTAGTAAAAACA+TGG | + | chr5.1:79172278-79172297 | None:intergenic | 25.0% |
| ! | TATGATTAATATGGTTGTGT+TGG | - | chr5.1:79172126-79172145 | MS.gene38127:intron | 25.0% |
| ! | TGGTATATATTTGTATTAGG+TGG | - | chr5.1:79172146-79172165 | MS.gene38127:intron | 25.0% |
| !! | TTTTGTAAACTATTGCACAA+CGG | + | chr5.1:79173283-79173302 | None:intergenic | 25.0% |
| !! | TTTTGTAAATGGTTGGATTA+AGG | - | chr5.1:79172426-79172445 | MS.gene38127:intron | 25.0% |
| !!! | AAATGAAGTTTTGAAGGTAA+GGG | + | chr5.1:79171932-79171951 | None:intergenic | 25.0% |
| !!! | AGAAGTGCTTACAATAAAAT+TGG | + | chr5.1:79172516-79172535 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTTTCTCCTTTCT+TGG | + | chr5.1:79172186-79172205 | None:intergenic | 25.0% |
| !!! | TTTGTTATTACATACTGTTC+TGG | + | chr5.1:79172230-79172249 | None:intergenic | 25.0% |
| AGAAGATAGAAGAGTTACTT+TGG | + | chr5.1:79171908-79171927 | None:intergenic | 30.0% | |
| ATCAAAGTTTGTGCTCAATT+AGG | - | chr5.1:79172012-79172031 | MS.gene38127:intron | 30.0% | |
| ATTTGTGATGCTACAGATAT+TGG | - | chr5.1:79172302-79172321 | MS.gene38127:intron | 30.0% | |
| GCGAAGAAGAATATGTAATA+AGG | + | chr5.1:79173470-79173489 | None:intergenic | 30.0% | |
| TAGATGGATAACTAACAAGT+GGG | + | chr5.1:79172837-79172856 | None:intergenic | 30.0% | |
| TCTCAATCCTAAAGAAATCA+GGG | - | chr5.1:79173137-79173156 | MS.gene38127:intron | 30.0% | |
| TGAGAAAGTGAAGATGATTT+AGG | + | chr5.1:79171958-79171977 | None:intergenic | 30.0% | |
| TTCTCAATCCTAAAGAAATC+AGG | - | chr5.1:79173136-79173155 | MS.gene38127:intron | 30.0% | |
| !! | AGGAAGAAATGAAGTTTTGA+AGG | + | chr5.1:79171938-79171957 | None:intergenic | 30.0% |
| !! | TTAGCCATTGCTTTTGTAAA+TGG | - | chr5.1:79172415-79172434 | MS.gene38127:intron | 30.0% |
| !!! | AATGAAGTTTTGAAGGTAAG+GGG | + | chr5.1:79171931-79171950 | None:intergenic | 30.0% |
| !!! | GAAATGAAGTTTTGAAGGTA+AGG | + | chr5.1:79171933-79171952 | None:intergenic | 30.0% |
| AAAATCCATGGATGCAGAAT+TGG | + | chr5.1:79172940-79172959 | None:intergenic | 35.0% | |
| AAATCCATGGATGCAGAATT+GGG | + | chr5.1:79172939-79172958 | None:intergenic | 35.0% | |
| AAGAATCCCCTGATTTCTTT+AGG | + | chr5.1:79173147-79173166 | None:intergenic | 35.0% | |
| AAGGATAGACAAATGTGAGT+AGG | - | chr5.1:79173346-79173365 | MS.gene38127:intron | 35.0% | |
| AGCACAAACTTTGATACCAA+GGG | + | chr5.1:79172007-79172026 | None:intergenic | 35.0% | |
| AGGTACCAATTAGATAGATG+AGG | - | chr5.1:79172446-79172465 | MS.gene38127:intron | 35.0% | |
| CCAACCATTTACAAAAGCAA+TGG | + | chr5.1:79172422-79172441 | None:intergenic | 35.0% | |
| CTACACAAATAGTCAACTAC+TGG | + | chr5.1:79173260-79173279 | None:intergenic | 35.0% | |
| CTCAATCCTAAAGAAATCAG+GGG | - | chr5.1:79173138-79173157 | MS.gene38127:intron | 35.0% | |
| CTTGCATCACATTGATCAAT+AGG | - | chr5.1:79173068-79173087 | MS.gene38127:intron | 35.0% | |
| GACAAGTTCCATTCAAAGAA+TGG | + | chr5.1:79173556-79173575 | None:intergenic | 35.0% | |
| GCAATGGCTAAGATTACAAA+AGG | + | chr5.1:79172406-79172425 | None:intergenic | 35.0% | |
| GCAGAATACAATGAATTCAC+CGG | - | chr5.1:79173648-79173667 | MS.gene38127:CDS | 35.0% | |
| GGATTCATATGAAGTTATGC+AGG | + | chr5.1:79173202-79173221 | None:intergenic | 35.0% | |
| GTAGATGGATAACTAACAAG+TGG | + | chr5.1:79172838-79172857 | None:intergenic | 35.0% | |
| GTGAGAATGAACACATTACA+AGG | + | chr5.1:79172494-79172513 | None:intergenic | 35.0% | |
| TGTGACCTCATCTATCTAAT+TGG | + | chr5.1:79172454-79172473 | None:intergenic | 35.0% | |
| ! | AATTCTGCATCCATGGATTT+TGG | - | chr5.1:79172939-79172958 | MS.gene38127:intron | 35.0% |
| ! | ATACCAAGGGAAGTAGTTTT+TGG | + | chr5.1:79171994-79172013 | None:intergenic | 35.0% |
| ! | ATGAAAACACGACTAGTTGA+TGG | - | chr5.1:79172888-79172907 | MS.gene38127:intron | 35.0% |
| ! | ATTCTGCATCCATGGATTTT+GGG | - | chr5.1:79172940-79172959 | MS.gene38127:intron | 35.0% |
| ! | GTCACGTAATTTTGTTCATG+AGG | + | chr5.1:79172796-79172815 | None:intergenic | 35.0% |
| ! | TAGAAGAGTTACTTTGGCTA+TGG | + | chr5.1:79171902-79171921 | None:intergenic | 35.0% |
| !! | ACACATTACAAGGAAGTGTT+TGG | + | chr5.1:79172484-79172503 | None:intergenic | 35.0% |
| !! | CCATTGCTTTTGTAAATGGT+TGG | - | chr5.1:79172419-79172438 | MS.gene38127:intron | 35.0% |
| !! | TTACAAGGAAGTGTTTGGTT+TGG | + | chr5.1:79172479-79172498 | None:intergenic | 35.0% |
| !!! | GTTTTTGTTGTTCCAACGAT+AGG | - | chr5.1:79173576-79173595 | MS.gene38127:intron | 35.0% |
| AAGGATTGATGTCCTATCGT+TGG | + | chr5.1:79173591-79173610 | None:intergenic | 40.0% | |
| CGAGATGAAGAAACCAAGAA+AGG | - | chr5.1:79172170-79172189 | MS.gene38127:intron | 40.0% | |
| CTGAATGTTAGTCAAGCTAC+CGG | + | chr5.1:79173670-79173689 | None:intergenic | 40.0% | |
| CTGGATCACCATTCTTTGAA+TGG | - | chr5.1:79173545-79173564 | MS.gene38127:intron | 40.0% | |
| GAACTGGATATGATACATGC+TGG | + | chr5.1:79172636-79172655 | None:intergenic | 40.0% | |
| GACAAATGTGAGTAGGTTAC+TGG | - | chr5.1:79173353-79173372 | MS.gene38127:intron | 40.0% | |
| GAGCACAAACTTTGATACCA+AGG | + | chr5.1:79172008-79172027 | None:intergenic | 40.0% | |
| GCATGTATCATATCCAGTTC+CGG | - | chr5.1:79172636-79172655 | MS.gene38127:intron | 40.0% | |
| TATTCTTACTCGTCCTCTAC+CGG | + | chr5.1:79172658-79172677 | None:intergenic | 40.0% | |
| TCACTAACTTTCACTGCGTA+GGG | + | chr5.1:79173705-79173724 | None:intergenic | 40.0% | |
| TCTCCAAAAACTACTTCCCT+TGG | - | chr5.1:79171988-79172007 | MS.gene38127:CDS | 40.0% | |
| TGTAAAAGCCCCAAAATCCA+TGG | + | chr5.1:79172952-79172971 | None:intergenic | 40.0% | |
| TTCACTAACTTTCACTGCGT+AGG | + | chr5.1:79173706-79173725 | None:intergenic | 40.0% | |
| ! | AAGAGTTACTTTGGCTATGG+TGG | + | chr5.1:79171899-79171918 | None:intergenic | 40.0% |
| ! | TTCTGCATCCATGGATTTTG+GGG | - | chr5.1:79172941-79172960 | MS.gene38127:intron | 40.0% |
| !! | AAGGGAAGTAGTTTTTGGAG+AGG | + | chr5.1:79171989-79172008 | None:intergenic | 40.0% |
| !! | AGTAGTTTTTGGAGAGGCAA+TGG | + | chr5.1:79171983-79172002 | None:intergenic | 40.0% |
| ACTCAGCTTAACTCTTCAGC+AGG | - | chr5.1:79172992-79173011 | MS.gene38127:intron | 45.0% | |
| AGCGACTAAGGTGTAGATCA+AGG | + | chr5.1:79173610-79173629 | None:intergenic | 45.0% | |
| ATCATATCCAGTTCCGGTAG+AGG | - | chr5.1:79172642-79172661 | MS.gene38127:intron | 45.0% | |
| ATCTACACCTTAGTCGCTTG+CGG | - | chr5.1:79173612-79173631 | MS.gene38127:CDS | 45.0% | |
| CTCAGCTTAACTCTTCAGCA+GGG | - | chr5.1:79172993-79173012 | MS.gene38127:intron | 45.0% | |
| TAAGGAAGTGGCGTCATCAT+TGG | + | chr5.1:79172358-79172377 | None:intergenic | 45.0% | |
| TACAGATATTGGCAGTCAGC+AGG | - | chr5.1:79172313-79172332 | MS.gene38127:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAG+TGG | + | chr5.1:79173492-79173511 | None:intergenic | 50.0% | |
| CTAACTTTCACTGCGTAGGG+AGG | + | chr5.1:79173702-79173721 | None:intergenic | 50.0% | |
| CTCTCCCAATTCTGCATCCA+TGG | - | chr5.1:79172932-79172951 | MS.gene38127:intron | 50.0% | |
| GACTCTCGCTCTCTACAATC+TGG | - | chr5.1:79173526-79173545 | MS.gene38127:intron | 50.0% | |
| GCTTAACTCTTCAGCAGGGT+AGG | - | chr5.1:79172997-79173016 | MS.gene38127:intron | 50.0% | |
| ! | CGCTTGCGGCAGTGTAATTT+TGG | - | chr5.1:79173626-79173645 | MS.gene38127:CDS | 50.0% |
| CAGTCAGCAGGAGAGAGAGA+AGG | - | chr5.1:79172325-79172344 | MS.gene38127:intron | 55.0% | |
| TACACTGCCGCAAGCGACTA+AGG | + | chr5.1:79173622-79173641 | None:intergenic | 55.0% | |
| TACTCGTCCTCTACCGGAAC+TGG | + | chr5.1:79172652-79172671 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 79171892 | 79173734 | 79171892 | ID=MS.gene38127 |
| chr5.1 | mRNA | 79171892 | 79173734 | 79171892 | ID=MS.gene38127.t1;Parent=MS.gene38127 |
| chr5.1 | exon | 79173593 | 79173734 | 79173593 | ID=MS.gene38127.t1.exon1;Parent=MS.gene38127.t1 |
| chr5.1 | CDS | 79173593 | 79173734 | 79173593 | ID=cds.MS.gene38127.t1;Parent=MS.gene38127.t1 |
| chr5.1 | exon | 79173392 | 79173461 | 79173392 | ID=MS.gene38127.t1.exon2;Parent=MS.gene38127.t1 |
| chr5.1 | CDS | 79173392 | 79173461 | 79173392 | ID=cds.MS.gene38127.t1;Parent=MS.gene38127.t1 |
| chr5.1 | exon | 79173235 | 79173308 | 79173235 | ID=MS.gene38127.t1.exon3;Parent=MS.gene38127.t1 |
| chr5.1 | CDS | 79173235 | 79173308 | 79173235 | ID=cds.MS.gene38127.t1;Parent=MS.gene38127.t1 |
| chr5.1 | exon | 79171892 | 79172028 | 79171892 | ID=MS.gene38127.t1.exon4;Parent=MS.gene38127.t1 |
| chr5.1 | CDS | 79171892 | 79172028 | 79171892 | ID=cds.MS.gene38127.t1;Parent=MS.gene38127.t1 |
| Gene Sequence |
| Protein sequence |
