AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55677


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55677.t1 MTR_3g063250 97.500 400 9 1 1 399 1 400 0.0 779
MS.gene55677.t1 MTR_3g063250 97.275 367 9 1 1 366 1 367 0.0 714
MS.gene55677.t1 MTR_3g063240 86.335 322 43 1 78 399 7 327 0.0 557
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55677.t1 AT3G02690 75.610 328 75 2 68 394 89 412 1.37e-166 473

Find 113 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCGATGCTGCTTGCTTTC+AGG 0.060471 3.3:-57153774 MS.gene55677:CDS
GTACTTGCTGCTTTGTTATT+TGG 0.128361 3.3:-57152661 MS.gene55677:CDS
TACCTTCTGGTTTCAATGCT+TGG 0.281970 3.3:-57153820 MS.gene55677:CDS
TCTCACCTGTACAGCTTGTT+GGG 0.293813 3.3:-57150635 MS.gene55677:CDS
GTCGATGCTGCTTGCTTTCA+GGG 0.300946 3.3:-57153773 MS.gene55677:CDS
GCAGAAGACTTCAGCTGGTT+TGG 0.301404 3.3:-57153732 MS.gene55677:CDS
CAGAAGACTTCAGCTGGTTT+GGG 0.335089 3.3:-57153731 MS.gene55677:CDS
ATTGGAGTTGTTGGAGCTGC+CGG 0.341031 3.3:-57152631 MS.gene55677:CDS
GTGCCTTGGGGAAGCGTTAT+GGG 0.347839 3.3:-57154002 MS.gene55677:CDS
GGTGGATTCTGTTGATTTGC+CGG 0.362199 3.3:+57154129 None:intergenic
AGAGGAAGAGCTTTACCTTC+TGG 0.363399 3.3:-57153833 MS.gene55677:CDS
TGTGCCTTGGGGAAGCGTTA+TGG 0.370312 3.3:-57154003 MS.gene55677:CDS
TTCTCACCTGTACAGCTTGT+TGG 0.377272 3.3:-57150636 MS.gene55677:CDS
CATCGAAGAGACTGTGCCTT+GGG 0.379009 3.3:-57154015 MS.gene55677:CDS
GGTGAGTCCATTGGAGTTGT+TGG 0.381294 3.3:-57152640 MS.gene55677:CDS
GGAGCTGCCGGGCTTGTACT+TGG 0.385948 3.3:-57152619 MS.gene55677:CDS
AACAATGAGCCTGCTGTAAG+TGG 0.386921 3.3:-57151614 MS.gene55677:CDS
AGTTGCTCCCATCAAATGAT+AGG 0.387462 3.3:+57152301 None:intergenic
TTGGTAGATTGCGTCGGAAC+AGG 0.388498 3.3:-57154097 MS.gene55677:CDS
GCGGGTGGTGGTGTTGGTTA+AGG 0.401721 3.3:+57154252 None:intergenic
TATTGATTCACAACCTTTGA+CGG 0.403423 3.3:-57152689 MS.gene55677:CDS
CGAAAATTGAGGCAAACATT+GGG 0.404211 3.3:+57151048 None:intergenic
TTTCAGGGGTTTCTTGCTGA+AGG 0.419771 3.3:-57153758 MS.gene55677:CDS
CACTGTGGGGAAGTGGGGAG+TGG 0.422259 3.3:-57152275 MS.gene55677:CDS
CCGAAAATTGAGGCAAACAT+TGG 0.438271 3.3:+57151047 None:intergenic
TGTGGGGAAGTGGGGAGTGG+TGG 0.438538 3.3:-57152272 MS.gene55677:CDS
ACCCATCCAGTTGCCATGAT+AGG 0.438828 3.3:+57152180 None:intergenic
AAGCGAGAAGAGGGGAATTG+TGG 0.440883 3.3:+57154205 None:intergenic
TTGGAGTTGTTGGAGCTGCC+GGG 0.442346 3.3:-57152630 MS.gene55677:CDS
TTACCTGCCCTATCATTTGA+TGG 0.443344 3.3:-57152309 MS.gene55677:CDS
AACTTCTCACTGTGGGGAAG+TGG 0.443633 3.3:-57152282 MS.gene55677:CDS
GTGGTGGAAAAGCGAGAAGA+GGG 0.451732 3.3:+57154196 None:intergenic
AAAGAAGTGATTCCTAATTA+CGG 0.454305 3.3:-57153923 MS.gene55677:CDS
TCTGATCCTATCATGGCAAC+TGG 0.460438 3.3:-57152186 MS.gene55677:CDS
TTGCAGCATATGGTTATTGG+TGG 0.460764 3.3:-57151665 MS.gene55677:intron
CATGATAGGATCAGAGTACT+TGG 0.465171 3.3:+57152194 None:intergenic
TTCAGGGGTTTCTTGCTGAA+GGG 0.468219 3.3:-57153757 MS.gene55677:CDS
TTGTTATTTGGTGAGTCCAT+TGG 0.469846 3.3:-57152649 MS.gene55677:CDS
TTTGGAAGTGCTGTTAGCTA+TGG 0.483715 3.3:-57151536 MS.gene55677:CDS
GGTTAAGGTGACGGTGGTGA+AGG 0.486318 3.3:+57154267 None:intergenic
GTACAGTTCAACGGATGTAT+TGG 0.491468 3.3:-57151579 MS.gene55677:CDS
ATGCGGAAACGGAGAGAAGA+TGG 0.492013 3.3:+57154172 None:intergenic
CTGGCCCCAACAAGCTGTAC+AGG 0.499277 3.3:+57150630 None:intergenic
GGGTTGCAGAAGACTTCAGC+TGG 0.500512 3.3:-57153737 MS.gene55677:CDS
CAAGTACTCTGATCCTATCA+TGG 0.508310 3.3:-57152193 MS.gene55677:CDS
ACTTCTCACTGTGGGGAAGT+GGG 0.511659 3.3:-57152281 MS.gene55677:CDS
GGTGGTGTTGGTTAAGGTGA+CGG 0.513546 3.3:+57154258 None:intergenic
GAAAGAGTAGCGGCGGGTGG+TGG 0.513851 3.3:+57154240 None:intergenic
GCAAGTACAGCCACCGTCAA+AGG 0.517053 3.3:+57152676 None:intergenic
ATCCTATCATGGCAACTGGA+TGG 0.518310 3.3:-57152182 MS.gene55677:CDS
TGGAGCATGGAATGCGGAAA+CGG 0.521876 3.3:+57154161 None:intergenic
GTAGCGGCGGGTGGTGGTGT+TGG 0.525807 3.3:+57154246 None:intergenic
GGGCTTGTACTTGGCGTCGT+AGG 0.527479 3.3:-57152610 MS.gene55677:CDS
TTGGCACTGTCATGGTTCGG+TGG 0.529695 3.3:-57152221 MS.gene55677:CDS
CTCACCTGTACAGCTTGTTG+GGG 0.533384 3.3:-57150634 MS.gene55677:CDS
TGGCACTGTCATGGTTCGGT+GGG 0.533959 3.3:-57152220 MS.gene55677:CDS
TACCTGCCCTATCATTTGAT+GGG 0.539425 3.3:-57152308 MS.gene55677:CDS
CTTCTCACTGTGGGGAAGTG+GGG 0.546730 3.3:-57152280 MS.gene55677:CDS
TGGGAGCAACTTCTCACTGT+GGG 0.546919 3.3:-57152289 MS.gene55677:CDS
GTTAAGGTGACGGTGGTGAA+GGG 0.547874 3.3:+57154268 None:intergenic
GGCAGCTCCAACAACTCCAA+TGG 0.552770 3.3:+57152633 None:intergenic
AGTGGTGGAAAAGCGAGAAG+AGG 0.554177 3.3:+57154195 None:intergenic
GCTTCTTGCAGCTCAGAGCA+TGG 0.554655 3.3:-57152247 MS.gene55677:CDS
TCCTATCATGGCAACTGGAT+GGG 0.555793 3.3:-57152181 MS.gene55677:intron
TTAAGACTCCCACTTACAGC+AGG 0.557189 3.3:+57151605 None:intergenic
TCATCGAAGAGACTGTGCCT+TGG 0.558301 3.3:-57154016 MS.gene55677:CDS
GCAGCACCACGGCGACAGCA+TGG 0.560788 3.3:+57154297 None:intergenic
CGTAGGACTTGTGTTACTTG+AGG 0.562304 3.3:-57152593 MS.gene55677:intron
CTCCCATCAAATGATAGGGC+AGG 0.566112 3.3:+57152306 None:intergenic
CAGTTGGCACTGTCATGGTT+CGG 0.567605 3.3:-57152224 MS.gene55677:CDS
TTTCTGGGGAACTGCAATGG+TGG 0.568350 3.3:-57153951 MS.gene55677:CDS
TACTGTAGCTGCAATATACA+TGG 0.570176 3.3:-57150604 MS.gene55677:CDS
CGTCGGAACAGGACAAGATG+TGG 0.570376 3.3:-57154086 MS.gene55677:CDS
ATCTACCAACTCGAGGTCGG+TGG 0.578134 3.3:+57154111 None:intergenic
GCAACAAGAAGAAACCCAGC+TGG 0.582668 3.3:+57153869 None:intergenic
CATGGCAGTTGGCACTGTCA+TGG 0.583057 3.3:-57152229 MS.gene55677:CDS
GGGGAATTGTGGAGTGTGAG+AGG 0.584400 3.3:+57154216 None:intergenic
GTTGCTCCCATCAAATGATA+GGG 0.584772 3.3:+57152302 None:intergenic
TACGACGCCAAGTACAAGCC+CGG 0.585440 3.3:+57152612 None:intergenic
TCGATGCTGCTTGCTTTCAG+GGG 0.585931 3.3:-57153772 MS.gene55677:CDS
GCAGCTCAGAGCATGGCAGT+TGG 0.587376 3.3:-57152240 MS.gene55677:CDS
TGGTGGAAAAGCGAGAAGAG+GGG 0.594034 3.3:+57154197 None:intergenic
TGATTCACAACCTTTGACGG+TGG 0.594698 3.3:-57152686 MS.gene55677:CDS
ATCCAAGCATTGAAACCAGA+AGG 0.594844 3.3:+57153818 None:intergenic
CCATGCTCCAATAAAACCAC+CGG 0.594876 3.3:-57154148 MS.gene55677:CDS
ACGGAGAGAAGATGGAGTGG+TGG 0.595523 3.3:+57154180 None:intergenic
GCAGTCTTACCCGAAAATTG+AGG 0.600905 3.3:+57151037 None:intergenic
TAAGAATCGCGAATGCCACA+AGG 0.602922 3.3:+57151636 None:intergenic
AGAGGTGAAAGAGTAGCGGC+GGG 0.615126 3.3:+57154234 None:intergenic
AGAATCCACCGACCTCGAGT+TGG 0.615914 3.3:-57154116 MS.gene55677:CDS
CTTGGGGAAGCGTTATGGGA+AGG 0.616732 3.3:-57153998 MS.gene55677:CDS
ACAATGAGCCTGCTGTAAGT+GGG 0.625638 3.3:-57151613 MS.gene55677:CDS
GAGAGGTGAAAGAGTAGCGG+CGG 0.626582 3.3:+57154233 None:intergenic
GGTGTTGGTTAAGGTGACGG+TGG 0.628057 3.3:+57154261 None:intergenic
TATTGCAGCTACAGTAACAC+TGG 0.628956 3.3:+57150611 None:intergenic
AAGAATCGCGAATGCCACAA+GGG 0.631679 3.3:+57151637 None:intergenic
GAAAATTGAGGCAAACATTG+GGG 0.640798 3.3:+57151049 None:intergenic
TCTTAAAGAGTACAGTTCAA+CGG 0.646276 3.3:-57151588 MS.gene55677:CDS
ATGGGAGCAACTTCTCACTG+TGG 0.649529 3.3:-57152290 MS.gene55677:CDS
CTCGAGTTGGTAGATTGCGT+CGG 0.651582 3.3:-57154103 MS.gene55677:CDS
GGTGAAAGAGTAGCGGCGGG+TGG 0.654425 3.3:+57154237 None:intergenic
ATCGAAGAGACTGTGCCTTG+GGG 0.656879 3.3:-57154014 MS.gene55677:CDS
GAAACGGAGAGAAGATGGAG+TGG 0.658221 3.3:+57154177 None:intergenic
CTTCCCATAACGCTTCCCCA+AGG 0.660357 3.3:+57153999 None:intergenic
GCAATCTACCAACTCGAGGT+CGG 0.661614 3.3:+57154108 None:intergenic
AGAATCGCGAATGCCACAAG+GGG 0.663619 3.3:+57151638 None:intergenic
TGTGAGAGGTGAAAGAGTAG+CGG 0.670902 3.3:+57154230 None:intergenic
GGATTCTGTTGATTTGCCGG+TGG 0.671329 3.3:+57154132 None:intergenic
AAGGGAGTTGAGCAGCACCA+CGG 0.694244 3.3:+57154286 None:intergenic
TCGTGGCCATGCTGTCGCCG+TGG 0.699440 3.3:-57154303 None:intergenic
GGGAGCAACTTCTCACTGTG+GGG 0.700978 3.3:-57152288 MS.gene55677:CDS
GAATCGCGAATGCCACAAGG+GGG 0.735698 3.3:+57151639 None:intergenic
CGACGCAATCTACCAACTCG+AGG 0.737114 3.3:+57154104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATAATTGTAAAAGA+TGG + chr3.3:57154004-57154023 None:intergenic 10.0%
!!! AATTTGTTAAAAAAAAAAAG+AGG - chr3.3:57153108-57153127 MS.gene55677:intron 10.0%
!!! ATTTTTTTTTTTAAAGAAAG+TGG + chr3.3:57153566-57153585 None:intergenic 10.0%
!!! TTTCATTATATTTATTTTTG+CGG - chr3.3:57152846-57152865 MS.gene55677:intron 10.0%
!! AAAAAAAAAAATACAAAACC+CGG + chr3.3:57153882-57153901 None:intergenic 15.0%
!! TAAAAATTACAAAATCAACT+AGG + chr3.3:57152468-57152487 None:intergenic 15.0%
!! TAAATATATGAATTTCAACA+AGG - chr3.3:57153451-57153470 MS.gene55677:intron 15.0%
!!! AAAATATTTGAATTTTCTAG+AGG + chr3.3:57154125-57154144 None:intergenic 15.0%
!!! AAAATCTTTTACATATATTG+TGG - chr3.3:57152380-57152399 MS.gene55677:intron 15.0%
!!! AAGATTTTGATTTCTAATTT+TGG + chr3.3:57152368-57152387 None:intergenic 15.0%
!!! AGATTTTGATTTCTAATTTT+GGG + chr3.3:57152367-57152386 None:intergenic 15.0%
!!! TCTTGATTTTTAATTGAAAA+AGG + chr3.3:57152792-57152811 None:intergenic 15.0%
!! AAATATGTAAGTGTACAAAA+TGG + chr3.3:57153680-57153699 None:intergenic 20.0%
!! ACTAGTAGTACTATTAATAA+GGG - chr3.3:57151442-57151461 MS.gene55677:intron 20.0%
!! ATAAATGAAAATTCACAGAA+AGG + chr3.3:57153425-57153444 None:intergenic 20.0%
!! ATAATATGGTGTATTCTTTA+TGG + chr3.3:57153738-57153757 None:intergenic 20.0%
!! GATACTTCAATAAATTATGA+AGG + chr3.3:57154055-57154074 None:intergenic 20.0%
!! TAACATATCTATTCTACAAA+AGG + chr3.3:57151423-57151442 None:intergenic 20.0%
!! TAATATGGTGTATTCTTTAT+GGG + chr3.3:57153737-57153756 None:intergenic 20.0%
!! TACTAGTAGTACTATTAATA+AGG - chr3.3:57151441-57151460 MS.gene55677:intron 20.0%
!! TAGTGAAATGATGATTATAT+AGG - chr3.3:57153047-57153066 MS.gene55677:intron 20.0%
!!! ATGTTTTCTTAAAAAATGAG+AGG + chr3.3:57153592-57153611 None:intergenic 20.0%
!!! GATAATTTTATGCTATGAAA+CGG - chr3.3:57152748-57152767 MS.gene55677:intron 20.0%
!!! TAATTTTGGTTTTAACCTAA+AGG - chr3.3:57152308-57152327 MS.gene55677:CDS 20.0%
!!! TACTTGAGGTATTTTAATTT+TGG - chr3.3:57152294-57152313 MS.gene55677:CDS 20.0%
!!! TGTTTTCTTAAAAAATGAGA+GGG + chr3.3:57153591-57153610 None:intergenic 20.0%
!!! TTTTAAATTGTAACGCAAAA+AGG + chr3.3:57152891-57152910 None:intergenic 20.0%
! AAAATCAGAAAGACAACTAA+TGG - chr3.3:57153930-57153949 MS.gene55677:CDS 25.0%
! AAAGAAGTGATTCCTAATTA+CGG - chr3.3:57150950-57150969 MS.gene55677:intron 25.0%
! AAATTATGAAGGATGTAAGT+GGG + chr3.3:57154044-57154063 None:intergenic 25.0%
! ACGAAAAAATGTGTATACAA+AGG + chr3.3:57154183-57154202 None:intergenic 25.0%
! CTATGTAGCAATTCTTTAAA+CGG - chr3.3:57153953-57153972 MS.gene55677:CDS 25.0%
! CTTTAGTGAATAAACATAGA+AGG + chr3.3:57152520-57152539 None:intergenic 25.0%
! GCACAATGTCAATAATAATA+TGG + chr3.3:57153752-57153771 None:intergenic 25.0%
! GTGTTTCATATTGATAGATA+TGG - chr3.3:57152036-57152055 MS.gene55677:intron 25.0%
! GTTAAAAAAAAAAAGAGGCA+TGG - chr3.3:57153113-57153132 MS.gene55677:intron 25.0%
! TAAATTATGAAGGATGTAAG+TGG + chr3.3:57154045-57154064 None:intergenic 25.0%
! TACTAATTACCATATTGAAG+AGG + chr3.3:57153639-57153658 None:intergenic 25.0%
! TCAAATGAAGCTTACATTTA+GGG - chr3.3:57151540-57151559 MS.gene55677:CDS 25.0%
! TGAATTAGAGCTTATAGTTA+GGG - chr3.3:57151497-57151516 MS.gene55677:intron 25.0%
! TTCAAATGAAGCTTACATTT+AGG - chr3.3:57151539-57151558 MS.gene55677:CDS 25.0%
! TTGAATTAGAGCTTATAGTT+AGG - chr3.3:57151496-57151515 MS.gene55677:intron 25.0%
!! AAATTCACACTTTTGTAAAC+TGG + chr3.3:57152927-57152946 None:intergenic 25.0%
!! AGTTTACAAAAGTGTGAATT+TGG - chr3.3:57152926-57152945 MS.gene55677:intron 25.0%
!! GTTTACAAAAGTGTGAATTT+GGG - chr3.3:57152927-57152946 MS.gene55677:intron 25.0%
!! GTTTTCTTAAAAAATGAGAG+GGG + chr3.3:57153590-57153609 None:intergenic 25.0%
!! TTTACATATATTGTGGATTG+CGG - chr3.3:57152387-57152406 MS.gene55677:intron 25.0%
!! TTTTAGCATACAATTTCTCT+TGG - chr3.3:57152483-57152502 MS.gene55677:intron 25.0%
!!! ATTTTTTCGTTTGGTATTTC+AGG - chr3.3:57154193-57154212 MS.gene55677:CDS 25.0%
!!! TATTGATAGATATGGATTAG+AGG - chr3.3:57152044-57152063 MS.gene55677:intron 25.0%
!!! TATTTCAGGTTTTTGTATCT+CGG - chr3.3:57154207-57154226 MS.gene55677:CDS 25.0%
!!! TGTATACACATTTTTTCGTT+TGG - chr3.3:57154184-57154203 MS.gene55677:CDS 25.0%
AAAAGTTGGGGATTCATATT+TGG + chr3.3:57151894-57151913 None:intergenic 30.0%
AAACGTTGGATATATAAGAG+AGG - chr3.3:57151650-57151669 MS.gene55677:CDS 30.0%
AACTAGGTAATTGTATGATG+TGG + chr3.3:57152452-57152471 None:intergenic 30.0%
ACATAAAAACCCAAACATGT+TGG + chr3.3:57151784-57151803 None:intergenic 30.0%
ACTGTAGTGTAGTTCTTATT+TGG - chr3.3:57151828-57151847 MS.gene55677:intron 30.0%
ATAAAAACCCAAACATGTTG+GGG + chr3.3:57151782-57151801 None:intergenic 30.0%
ATTTGACCTTGTAACCTTAA+GGG - chr3.3:57153493-57153512 MS.gene55677:intron 30.0%
CAGATTCATATTGATAGACA+TGG + chr3.3:57152003-57152022 None:intergenic 30.0%
CATAAAAACCCAAACATGTT+GGG + chr3.3:57151783-57151802 None:intergenic 30.0%
CATCCATGTAAAATCCAAAA+CGG - chr3.3:57153609-57153628 MS.gene55677:intron 30.0%
! ATATTTCTGCAACTATGATC+AGG + chr3.3:57152985-57153004 None:intergenic 30.0%
! CATGTTTGTGTATCTTTTTG+AGG - chr3.3:57154156-57154175 MS.gene55677:CDS 30.0%
! TATTTCTGCAACTATGATCA+GGG + chr3.3:57152984-57153003 None:intergenic 30.0%
! TCTTAAAGAGTACAGTTCAA+CGG - chr3.3:57153285-57153304 MS.gene55677:intron 30.0%
! TTCTTTTACAGTGCAACTAA+AGG - chr3.3:57153364-57153383 MS.gene55677:intron 30.0%
!! TAACCGTTTTGGATTTTACA+TGG + chr3.3:57153615-57153634 None:intergenic 30.0%
!! TATTGATAGACATGGATTAG+AGG + chr3.3:57151995-57152014 None:intergenic 30.0%
!! TATTGATTCACAACCTTTGA+CGG - chr3.3:57152184-57152203 MS.gene55677:CDS 30.0%
!!! GCTTAGTTTTATGTTGTAAC+CGG - chr3.3:57151864-57151883 MS.gene55677:intron 30.0%
!!! GGTCAATTTTTTCTCTTGAA+TGG + chr3.3:57153983-57154002 None:intergenic 30.0%
!!! GTCAACTTTTTGTGTTGATT+CGG - chr3.3:57152081-57152100 MS.gene55677:intron 30.0%
!!! TTTTTTGTACCTTTTGTCAC+CGG - chr3.3:57154094-57154113 MS.gene55677:CDS 30.0%
AACGGTTAACCTCTTCAATA+TGG - chr3.3:57153627-57153646 MS.gene55677:intron 35.0%
AAGCTGAAAACAGCTTATGA+AGG - chr3.3:57151344-57151363 MS.gene55677:intron 35.0%
ACGAAAAAAGGACCGTAATT+AGG + chr3.3:57150965-57150984 None:intergenic 35.0%
ACTGCAGTGTAGTTCTTATT+TGG + chr3.3:57151939-57151958 None:intergenic 35.0%
AGAGCTTATAGTTAGGGTTA+GGG - chr3.3:57151503-57151522 MS.gene55677:intron 35.0%
ATGTAGTTTAGATCACCTTG+GGG - chr3.3:57153516-57153535 MS.gene55677:intron 35.0%
CACTCTTACCCAAAACTTTA+AGG + chr3.3:57151694-57151713 None:intergenic 35.0%
CCATATGCTGCAAAAGAAAA+AGG + chr3.3:57153201-57153220 None:intergenic 35.0%
CGAAAATTGAGGCAAACATT+GGG + chr3.3:57153828-57153847 None:intergenic 35.0%
CGAATTAAGACACTTCCTTT+AGG + chr3.3:57152326-57152345 None:intergenic 35.0%
GAAAATTGAGGCAAACATTG+GGG + chr3.3:57153827-57153846 None:intergenic 35.0%
GATCTAAACTACATCCCTTA+AGG + chr3.3:57153510-57153529 None:intergenic 35.0%
GATGTAGTTTAGATCACCTT+GGG - chr3.3:57153515-57153534 MS.gene55677:intron 35.0%
GATTTGACCTTGTAACCTTA+AGG - chr3.3:57153492-57153511 MS.gene55677:intron 35.0%
GTAGCAATTCTTTAAACGGA+AGG - chr3.3:57153957-57153976 MS.gene55677:CDS 35.0%
TACTGTAGCTGCAATATACA+TGG - chr3.3:57154269-57154288 MS.gene55677:CDS 35.0%
TAGAGCTTATAGTTAGGGTT+AGG - chr3.3:57151502-57151521 MS.gene55677:intron 35.0%
TTCACTAAAGCAAACACTAC+TGG - chr3.3:57152530-57152549 MS.gene55677:intron 35.0%
! AACCCATTGCCTTAAAGTTT+TGG - chr3.3:57151682-57151701 MS.gene55677:intron 35.0%
! AATTTTGGGCTGTGCTTAAA+GGG + chr3.3:57152353-57152372 None:intergenic 35.0%
! ACCCATTGCCTTAAAGTTTT+GGG - chr3.3:57151683-57151702 MS.gene55677:intron 35.0%
! AGTATCACCGTTCTTTTTCT+GGG - chr3.3:57150907-57150926 MS.gene55677:intron 35.0%
! ATTGAAGAGGTTAACCGTTT+TGG + chr3.3:57153626-57153645 None:intergenic 35.0%
! CAATGTTTGCCTCAATTTTC+GGG - chr3.3:57153827-57153846 MS.gene55677:CDS 35.0%
! CCAATGTTTGCCTCAATTTT+CGG - chr3.3:57153826-57153845 MS.gene55677:CDS 35.0%
! CCTTTTTCTTTTGCAGCATA+TGG - chr3.3:57153198-57153217 MS.gene55677:intron 35.0%
! CTTTTCGTTTAATTCCAGCT+GGG - chr3.3:57150990-57151009 MS.gene55677:intron 35.0%
! CTTTTGCAGCATATGGTTAT+TGG - chr3.3:57153205-57153224 MS.gene55677:intron 35.0%
! TAATTTTGGGCTGTGCTTAA+AGG + chr3.3:57152354-57152373 None:intergenic 35.0%
! TAGTATCACCGTTCTTTTTC+TGG - chr3.3:57150906-57150925 MS.gene55677:intron 35.0%
! TCTTTTCGTTTAATTCCAGC+TGG - chr3.3:57150989-57151008 MS.gene55677:intron 35.0%
! TTTTATTGGAGCATGGAATG+CGG + chr3.3:57150721-57150740 None:intergenic 35.0%
!! ACATGGATTAGAGGAAAAGT+TGG + chr3.3:57151986-57152005 None:intergenic 35.0%
!! ACCCAAAACTTTAAGGCAAT+GGG + chr3.3:57151687-57151706 None:intergenic 35.0%
!! ACTTTAAGGCAATGGGTTTA+TGG + chr3.3:57151680-57151699 None:intergenic 35.0%
!! AGTTCTTATTTGGTGCACAT+TGG - chr3.3:57151838-57151857 MS.gene55677:intron 35.0%
!! AGTTCTTATTTGGTGCACAT+TGG + chr3.3:57151857-57151838 None:intergenic 35.0%
!! ATGGATTAGAGGAAAAGTTG+GGG + chr3.3:57152074-57152055 None:intergenic 35.0%
!! CATGGATTAGAGGAAAAGTT+GGG + chr3.3:57151985-57152004 None:intergenic 35.0%
!! CTTTAAGGCAATGGGTTTAT+GGG + chr3.3:57151679-57151698 None:intergenic 35.0%
!! GAATTTTCTAGAGGAAATGC+CGG + chr3.3:57154116-57154135 None:intergenic 35.0%
!! GTACTTGCTGCTTTGTTATT+TGG - chr3.3:57152212-57152231 MS.gene55677:CDS 35.0%
!! TACCCAAAACTTTAAGGCAA+TGG + chr3.3:57151688-57151707 None:intergenic 35.0%
!! TGTTTTTGCTTCGTCTTCTT+CGG + chr3.3:57150825-57150844 None:intergenic 35.0%
!! TTGTTATTTGGTGAGTCCAT+TGG - chr3.3:57152224-57152243 MS.gene55677:CDS 35.0%
!!! TAAAGTTTTGGGTAAGAGTG+TGG - chr3.3:57151694-57151713 MS.gene55677:intron 35.0%
!!! TGTTGCTTGTTTTGACTATC+TGG - chr3.3:57152140-57152159 MS.gene55677:intron 35.0%
!!! TTGTTGCTGCTTTGTTTTGT+TGG - chr3.3:57151581-57151600 MS.gene55677:CDS 35.0%
AAGTGTGAATTTGGGTGTGT+TGG - chr3.3:57152935-57152954 MS.gene55677:intron 40.0%
ACTAGAAATGGAGGAAACGT+TGG - chr3.3:57151636-57151655 MS.gene55677:CDS 40.0%
AGTTGCTCCCATCAAATGAT+AGG + chr3.3:57152575-57152594 None:intergenic 40.0%
ATGGCTTAGAGGAAAAGTTG+GGG + chr3.3:57151906-57151925 None:intergenic 40.0%
CAAACATGTTGGGGATTATG+GGG + chr3.3:57151773-57151792 None:intergenic 40.0%
CAAGTACTCTGATCCTATCA+TGG - chr3.3:57152680-57152699 MS.gene55677:CDS 40.0%
CCAAACATGTTGGGGATTAT+GGG + chr3.3:57151774-57151793 None:intergenic 40.0%
CCATAATCCCCAACATGTTT+GGG - chr3.3:57151772-57151791 MS.gene55677:intron 40.0%
CCGAAAATTGAGGCAAACAT+TGG + chr3.3:57153829-57153848 None:intergenic 40.0%
CGAAAAGACGCAACGAAAAA+AGG + chr3.3:57150977-57150996 None:intergenic 40.0%
CTACATCCCTTAAGGTTACA+AGG + chr3.3:57153502-57153521 None:intergenic 40.0%
GATGGCTTAGAGGAAAAGTT+GGG + chr3.3:57151907-57151926 None:intergenic 40.0%
GCTAACAGCACTTCCAAAAA+TGG + chr3.3:57153335-57153354 None:intergenic 40.0%
GGATGTAGTTTAGATCACCT+TGG - chr3.3:57153514-57153533 MS.gene55677:intron 40.0%
GTACAGTTCAACGGATGTAT+TGG - chr3.3:57153294-57153313 MS.gene55677:intron 40.0%
GTTGCTCCCATCAAATGATA+GGG + chr3.3:57152574-57152593 None:intergenic 40.0%
TAACAATGGGAAAGAGTTGC+CGG - chr3.3:57153860-57153879 MS.gene55677:CDS 40.0%
TACCTGCCCTATCATTTGAT+GGG - chr3.3:57152565-57152584 MS.gene55677:intron 40.0%
TATTGCAGCTACAGTAACAC+TGG + chr3.3:57154265-57154284 None:intergenic 40.0%
TCACAGAAAGGAAAAGAGAG+AGG + chr3.3:57153413-57153432 None:intergenic 40.0%
TGAAAGGTCTCTCGTTGTTT+AGG - chr3.3:57153141-57153160 MS.gene55677:intron 40.0%
TTACCTGCCCTATCATTTGA+TGG - chr3.3:57152564-57152583 MS.gene55677:intron 40.0%
TTCCAAAAATGGACGTGTAG+AGG + chr3.3:57153324-57153343 None:intergenic 40.0%
TTGCAGCATATGGTTATTGG+TGG - chr3.3:57153208-57153227 MS.gene55677:intron 40.0%
TTGTAACGCAAAAAGGCTTG+AGG + chr3.3:57152884-57152903 None:intergenic 40.0%
! AAGCTTACATTTAGGGTCAG+AGG - chr3.3:57151547-57151566 MS.gene55677:CDS 40.0%
! AAGGTGTCAGTTCAGTGTTA+AGG - chr3.3:57153470-57153489 MS.gene55677:intron 40.0%
! CATGATAGGATCAGAGTACT+TGG + chr3.3:57152682-57152701 None:intergenic 40.0%
! GTATCACCGTTCTTTTTCTG+GGG - chr3.3:57150908-57150927 MS.gene55677:intron 40.0%
!! ATCCAAGCATTGAAACCAGA+AGG + chr3.3:57151058-57151077 None:intergenic 40.0%
!! CTTATTTGGTGCACATTGGA+TGG - chr3.3:57151842-57151861 MS.gene55677:intron 40.0%
!! CTTATTTGGTGCACATTGGA+TGG + chr3.3:57151861-57151842 None:intergenic 40.0%
!! TACCTTCTGGTTTCAATGCT+TGG - chr3.3:57151053-57151072 MS.gene55677:CDS 40.0%
!! TTTGGAAGTGCTGTTAGCTA+TGG - chr3.3:57153337-57153356 MS.gene55677:intron 40.0%
!!! GTTGCTTTTGCTGCTTTTAG+AGG - chr3.3:57151022-57151041 MS.gene55677:intron 40.0%
!!! TGATTTGCCGGTGGTTTTAT+TGG + chr3.3:57150735-57150754 None:intergenic 40.0%
AACAATGAGCCTGCTGTAAG+TGG - chr3.3:57153259-57153278 MS.gene55677:intron 45.0%
AACAATGGGAAAGAGTTGCC+GGG - chr3.3:57153861-57153880 MS.gene55677:CDS 45.0%
AAGAATCGCGAATGCCACAA+GGG + chr3.3:57153239-57153258 None:intergenic 45.0%
ACAATGAGCCTGCTGTAAGT+GGG - chr3.3:57153260-57153279 MS.gene55677:intron 45.0%
AGAGGAAAAGTTGGGGATTC+TGG + chr3.3:57151899-57151918 None:intergenic 45.0%
AGAGGAAGAGCTTTACCTTC+TGG - chr3.3:57151040-57151059 MS.gene55677:intron 45.0%
ATCCTATCATGGCAACTGGA+TGG - chr3.3:57152691-57152710 MS.gene55677:CDS 45.0%
CAACTATGATCAGGGACTCA+GGG + chr3.3:57152976-57152995 None:intergenic 45.0%
CCATGCTCCAATAAAACCAC+CGG - chr3.3:57150725-57150744 MS.gene55677:intron 45.0%
CCCAAACATGTTGGGGATTA+TGG + chr3.3:57151775-57151794 None:intergenic 45.0%
CCCATAATCCCCAACATGTT+TGG - chr3.3:57151771-57151790 MS.gene55677:intron 45.0%
CCTTGGGGACAGTTGTAAAA+TGG - chr3.3:57153531-57153550 MS.gene55677:intron 45.0%
CTCGTTGTTTAGGAACTCTC+TGG - chr3.3:57153151-57153170 MS.gene55677:intron 45.0%
GCAGTCTTACCCGAAAATTG+AGG + chr3.3:57153839-57153858 None:intergenic 45.0%
GCAGTTCCCCAGAAAAAGAA+CGG + chr3.3:57150917-57150936 None:intergenic 45.0%
GGATGGCTTAGAGGAAAAGT+TGG + chr3.3:57151908-57151927 None:intergenic 45.0%
GGCAACTCTTTCCCATTGTT+AGG + chr3.3:57153861-57153880 None:intergenic 45.0%
GGGTAAGACTGCCTAACAAT+GGG - chr3.3:57153847-57153866 MS.gene55677:CDS 45.0%
TAAGAATCGCGAATGCCACA+AGG + chr3.3:57153240-57153259 None:intergenic 45.0%
TCCTATCATGGCAACTGGAT+GGG - chr3.3:57152692-57152711 MS.gene55677:CDS 45.0%
TCTGATCCTATCATGGCAAC+TGG - chr3.3:57152687-57152706 MS.gene55677:CDS 45.0%
TGATTCACAACCTTTGACGG+TGG - chr3.3:57152187-57152206 MS.gene55677:CDS 45.0%
TGTGAGAGGTGAAAGAGTAG+CGG + chr3.3:57150646-57150665 None:intergenic 45.0%
TTAAGACTCCCACTTACAGC+AGG + chr3.3:57153271-57153290 None:intergenic 45.0%
TTCAGGGGTTTCTTGCTGAA+GGG - chr3.3:57151116-57151135 MS.gene55677:intron 45.0%
TTCTCACCTGTACAGCTTGT+TGG - chr3.3:57154237-57154256 MS.gene55677:CDS 45.0%
TTGTGCTTGTGATGCATTGC+AGG - chr3.3:57153766-57153785 MS.gene55677:CDS 45.0%
TTTCAGGGGTTTCTTGCTGA+AGG - chr3.3:57151115-57151134 MS.gene55677:intron 45.0%
! AAGAGGCATGGACATCTGAA+AGG - chr3.3:57153125-57153144 MS.gene55677:intron 45.0%
! CAGAAGACTTCAGCTGGTTT+GGG - chr3.3:57151142-57151161 MS.gene55677:intron 45.0%
! CCATTTTACAACTGTCCCCA+AGG + chr3.3:57153534-57153553 None:intergenic 45.0%
! CTCCTCTACACGTCCATTTT+TGG - chr3.3:57153319-57153338 MS.gene55677:intron 45.0%
! CTTACATTTAGGGTCAGAGG+TGG - chr3.3:57151550-57151569 MS.gene55677:CDS 45.0%
! GTGTGGTGTCTCTCTTTTAG+CGG - chr3.3:57151711-57151730 MS.gene55677:intron 45.0%
! TCTCACCTGTACAGCTTGTT+GGG - chr3.3:57154238-57154257 MS.gene55677:CDS 45.0%
! TGTCCCACATCGACTAGAAA+TGG - chr3.3:57151624-57151643 MS.gene55677:CDS 45.0%
! TGTGGTGTCTCTCTTTTAGC+GGG - chr3.3:57151712-57151731 MS.gene55677:intron 45.0%
! TTAGGAACTCTCTGGAAGCT+TGG - chr3.3:57153159-57153178 MS.gene55677:intron 45.0%
!! ATCTGGCATCGATATATCGC+AGG - chr3.3:57152157-57152176 MS.gene55677:intron 45.0%
!! CCTCCATTTCTAGTCGATGT+GGG + chr3.3:57151630-57151649 None:intergenic 45.0%
!! CGTAGGACTTGTGTTACTTG+AGG - chr3.3:57152280-57152299 MS.gene55677:CDS 45.0%
!! CTTTTTCTGGGGAACTGCAA+TGG - chr3.3:57150919-57150938 MS.gene55677:intron 45.0%
!! GGGATTCATATTTGGTGCAC+CGG + chr3.3:57151886-57151905 None:intergenic 45.0%
!! GGTGGATTCTGTTGATTTGC+CGG + chr3.3:57150747-57150766 None:intergenic 45.0%
!! TCCTCCATTTCTAGTCGATG+TGG + chr3.3:57151631-57151650 None:intergenic 45.0%
!!! TTGTATTTTTTTTTTTTTTT+TGG - chr3.3:57153886-57153905 MS.gene55677:CDS 5.0%
AACTTCTCACTGTGGGGAAG+TGG - chr3.3:57152591-57152610 MS.gene55677:intron 50.0%
AAGCGAGAAGAGGGGAATTG+TGG + chr3.3:57150671-57150690 None:intergenic 50.0%
ACCCATCCAGTTGCCATGAT+AGG + chr3.3:57152696-57152715 None:intergenic 50.0%
ACTTCTCACTGTGGGGAAGT+GGG - chr3.3:57152592-57152611 MS.gene55677:intron 50.0%
AGAATCGCGAATGCCACAAG+GGG + chr3.3:57153238-57153257 None:intergenic 50.0%
ATCGAAGAGACTGTGCCTTG+GGG - chr3.3:57150859-57150878 MS.gene55677:intron 50.0%
ATGCGGAAACGGAGAGAAGA+TGG + chr3.3:57150704-57150723 None:intergenic 50.0%
ATGGGAGCAACTTCTCACTG+TGG - chr3.3:57152583-57152602 MS.gene55677:intron 50.0%
ATTGGAGTTGTTGGAGCTGC+CGG - chr3.3:57152242-57152261 MS.gene55677:CDS 50.0%
CAGTTGGCACTGTCATGGTT+CGG - chr3.3:57152649-57152668 MS.gene55677:CDS 50.0%
CATCGAAGAGACTGTGCCTT+GGG - chr3.3:57150858-57150877 MS.gene55677:intron 50.0%
CGGGTAAGACTGCCTAACAA+TGG - chr3.3:57153846-57153865 MS.gene55677:CDS 50.0%
CTCCCATCAAATGATAGGGC+AGG + chr3.3:57152570-57152589 None:intergenic 50.0%
GAAACGGAGAGAAGATGGAG+TGG + chr3.3:57150699-57150718 None:intergenic 50.0%
GAGGAAATGCCGGTGACAAA+AGG + chr3.3:57154106-57154125 None:intergenic 50.0%
GCAACAAGAAGAAACCCAGC+TGG + chr3.3:57151007-57151026 None:intergenic 50.0%
GCAACTATGATCAGGGACTC+AGG + chr3.3:57152977-57152996 None:intergenic 50.0%
GCAATCTACCAACTCGAGGT+CGG + chr3.3:57150768-57150787 None:intergenic 50.0%
GCAGAAGACTTCAGCTGGTT+TGG - chr3.3:57151141-57151160 MS.gene55677:intron 50.0%
GGTGAGTCCATTGGAGTTGT+TGG - chr3.3:57152233-57152252 MS.gene55677:CDS 50.0%
GTGCACATTGGATGGCTTAG+AGG + chr3.3:57151869-57151850 None:intergenic 50.0%
TCATCGAAGAGACTGTGCCT+TGG - chr3.3:57150857-57150876 MS.gene55677:intron 50.0%
TGGAGCATGGAATGCGGAAA+CGG + chr3.3:57150715-57150734 None:intergenic 50.0%
TGGGAGCAACTTCTCACTGT+GGG - chr3.3:57152584-57152603 MS.gene55677:intron 50.0%
TGGTGGAAAAGCGAGAAGAG+GGG + chr3.3:57150679-57150698 None:intergenic 50.0%
TTGGTAGATTGCGTCGGAAC+AGG - chr3.3:57150776-57150795 MS.gene55677:intron 50.0%
! AGTGGTGGAAAAGCGAGAAG+AGG + chr3.3:57150681-57150700 None:intergenic 50.0%
! CCCACATCGACTAGAAATGG+AGG - chr3.3:57151627-57151646 MS.gene55677:CDS 50.0%
! GTCGATGCTGCTTGCTTTCA+GGG - chr3.3:57151100-57151119 MS.gene55677:intron 50.0%
! GTGGTGGAAAAGCGAGAAGA+GGG + chr3.3:57150680-57150699 None:intergenic 50.0%
! GTTAAGGTGACGGTGGTGAA+GGG + chr3.3:57150608-57150627 None:intergenic 50.0%
! TCGATGCTGCTTGCTTTCAG+GGG - chr3.3:57151101-57151120 MS.gene55677:intron 50.0%
! TTTCTGGGGAACTGCAATGG+TGG - chr3.3:57150922-57150941 MS.gene55677:intron 50.0%
!! CTCACCTGTACAGCTTGTTG+GGG - chr3.3:57154239-57154258 MS.gene55677:CDS 50.0%
!! CTCGAGTTGGTAGATTGCGT+CGG - chr3.3:57150770-57150789 MS.gene55677:intron 50.0%
!! GGATTCTGTTGATTTGCCGG+TGG + chr3.3:57150744-57150763 None:intergenic 50.0%
!! GGTGGTGTTGGTTAAGGTGA+CGG + chr3.3:57150618-57150637 None:intergenic 50.0%
!!! CCGGTGGTTTTATTGGAGCA+TGG + chr3.3:57150728-57150747 None:intergenic 50.0%
AAGGGAGTTGAGCAGCACCA+CGG + chr3.3:57150590-57150609 None:intergenic 55.0%
ACGGAGAGAAGATGGAGTGG+TGG + chr3.3:57150696-57150715 None:intergenic 55.0%
AGAATCCACCGACCTCGAGT+TGG - chr3.3:57150757-57150776 MS.gene55677:intron 55.0%
AGAGGTGAAAGAGTAGCGGC+GGG + chr3.3:57150642-57150661 None:intergenic 55.0%
ATCTACCAACTCGAGGTCGG+TGG + chr3.3:57150765-57150784 None:intergenic 55.0%
CATGGCAGTTGGCACTGTCA+TGG - chr3.3:57152644-57152663 MS.gene55677:CDS 55.0%
CGACGCAATCTACCAACTCG+AGG + chr3.3:57150772-57150791 None:intergenic 55.0%
CGTCGGAACAGGACAAGATG+TGG - chr3.3:57150787-57150806 MS.gene55677:intron 55.0%
CTTCCCATAACGCTTCCCCA+AGG + chr3.3:57150877-57150896 None:intergenic 55.0%
CTTCTCACTGTGGGGAAGTG+GGG - chr3.3:57152593-57152612 MS.gene55677:intron 55.0%
GAATCGCGAATGCCACAAGG+GGG + chr3.3:57153237-57153256 None:intergenic 55.0%
GAGAGGTGAAAGAGTAGCGG+CGG + chr3.3:57150643-57150662 None:intergenic 55.0%
GCAAGTACAGCCACCGTCAA+AGG + chr3.3:57152200-57152219 None:intergenic 55.0%
GCTTCTTGCAGCTCAGAGCA+TGG - chr3.3:57152626-57152645 MS.gene55677:CDS 55.0%
GGCAGCTCCAACAACTCCAA+TGG + chr3.3:57152243-57152262 None:intergenic 55.0%
GGGAGCAACTTCTCACTGTG+GGG - chr3.3:57152585-57152604 MS.gene55677:intron 55.0%
GGGGAATTGTGGAGTGTGAG+AGG + chr3.3:57150660-57150679 None:intergenic 55.0%
GGGTTGCAGAAGACTTCAGC+TGG - chr3.3:57151136-57151155 MS.gene55677:intron 55.0%
TACGACGCCAAGTACAAGCC+CGG + chr3.3:57152264-57152283 None:intergenic 55.0%
TTGGAGTTGTTGGAGCTGCC+GGG - chr3.3:57152243-57152262 MS.gene55677:CDS 55.0%
! CGTCGATGCTGCTTGCTTTC+AGG - chr3.3:57151099-57151118 MS.gene55677:intron 55.0%
! GGTTAAGGTGACGGTGGTGA+AGG + chr3.3:57150609-57150628 None:intergenic 55.0%
! TATTGGTGGTCTCCCCCTTG+TGG - chr3.3:57153222-57153241 MS.gene55677:intron 55.0%
! TTGGCACTGTCATGGTTCGG+TGG - chr3.3:57152652-57152671 MS.gene55677:CDS 55.0%
!! ATTATGGGGAGCGCTTGGAG+CGG + chr3.3:57151759-57151778 None:intergenic 55.0%
!! CGGCAATGGGCTAAACGTCT+AGG + chr3.3:57151739-57151758 None:intergenic 55.0%
!! CTTGGGGAAGCGTTATGGGA+AGG - chr3.3:57150875-57150894 MS.gene55677:intron 55.0%
!! GGTGTTGGTTAAGGTGACGG+TGG + chr3.3:57150615-57150634 None:intergenic 55.0%
!! GTGCCTTGGGGAAGCGTTAT+GGG - chr3.3:57150871-57150890 MS.gene55677:intron 55.0%
!! TGGCACTGTCATGGTTCGGT+GGG - chr3.3:57152653-57152672 MS.gene55677:CDS 55.0%
!! TGTGCCTTGGGGAAGCGTTA+TGG - chr3.3:57150870-57150889 MS.gene55677:intron 55.0%
CTGGCCCCAACAAGCTGTAC+AGG + chr3.3:57154246-57154265 None:intergenic 60.0%
GCAGCTCAGAGCATGGCAGT+TGG - chr3.3:57152633-57152652 MS.gene55677:CDS 60.0%
GGGCTTGTACTTGGCGTCGT+AGG - chr3.3:57152263-57152282 MS.gene55677:CDS 60.0%
!! GCGGGTGGTGGTGTTGGTTA+AGG + chr3.3:57150624-57150643 None:intergenic 60.0%
!! TGGGGATTATGGGGAGCGCT+TGG + chr3.3:57151764-57151783 None:intergenic 60.0%
CACTGTGGGGAAGTGGGGAG+TGG - chr3.3:57152598-57152617 MS.gene55677:CDS 65.0%
GAAAGAGTAGCGGCGGGTGG+TGG + chr3.3:57150636-57150655 None:intergenic 65.0%
GGAGCTGCCGGGCTTGTACT+TGG - chr3.3:57152254-57152273 MS.gene55677:CDS 65.0%
GGTGAAAGAGTAGCGGCGGG+TGG + chr3.3:57150639-57150658 None:intergenic 65.0%
TGTGGGGAAGTGGGGAGTGG+TGG - chr3.3:57152601-57152620 MS.gene55677:CDS 65.0%
! GGAGCGCTTGGAGCGGCAAT+GGG + chr3.3:57151752-57151771 None:intergenic 65.0%
! GTAGCGGCGGGTGGTGGTGT+TGG + chr3.3:57150630-57150649 None:intergenic 70.0%
!! GGGAGCGCTTGGAGCGGCAA+TGG + chr3.3:57151753-57151772 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 57150578 57154317 57150578 ID=MS.gene55677
chr3.3 mRNA 57150578 57154317 57150578 ID=MS.gene55677.t1;Parent=MS.gene55677
chr3.3 exon 57153727 57154317 57153727 ID=MS.gene55677.t1.exon1;Parent=MS.gene55677.t1
chr3.3 CDS 57153727 57154317 57153727 ID=cds.MS.gene55677.t1;Parent=MS.gene55677.t1
chr3.3 exon 57152594 57152716 57152594 ID=MS.gene55677.t1.exon2;Parent=MS.gene55677.t1
chr3.3 CDS 57152594 57152716 57152594 ID=cds.MS.gene55677.t1;Parent=MS.gene55677.t1
chr3.3 exon 57152182 57152331 57152182 ID=MS.gene55677.t1.exon3;Parent=MS.gene55677.t1
chr3.3 CDS 57152182 57152331 57152182 ID=cds.MS.gene55677.t1;Parent=MS.gene55677.t1
chr3.3 exon 57151510 57151681 57151510 ID=MS.gene55677.t1.exon4;Parent=MS.gene55677.t1
chr3.3 CDS 57151510 57151681 57151510 ID=cds.MS.gene55677.t1;Parent=MS.gene55677.t1
chr3.3 exon 57151047 57151107 57151047 ID=MS.gene55677.t1.exon5;Parent=MS.gene55677.t1
chr3.3 CDS 57151047 57151107 57151047 ID=cds.MS.gene55677.t1;Parent=MS.gene55677.t1
chr3.3 exon 57150578 57150680 57150578 ID=MS.gene55677.t1.exon6;Parent=MS.gene55677.t1
chr3.3 CDS 57150578 57150680 57150578 ID=cds.MS.gene55677.t1;Parent=MS.gene55677.t1
Gene Sequence

>MS.gene55677

ATGCTGTCGCCGTGGTGCTGCTCAACTCCCTTCACCACCGTCACCTTAACCAACACCACCACCCGCCGCTACTCTTTCACCTCTCACACTCCACAATTCCCCTCTTCTCGCTTTTCCACCACTCCATCTTCTCTCCGTTTCCGCATTCCATGCTCCAATAAAACCACCGGCAAATCAACAGAATCCACCGACCTCGAGTTGGTAGATTGCGTCGGAACAGGACAAGATGTGGAGTGTCTTCTAACCGAAGAAGACGAAGCAAAAACAGAAGATGAATCATCATCGAAGAGACTGTGCCTTGGGGAAGCGTTATGGGAAGGTGCAGTGTTAGTATCACCGTTCTTTTTCTGGGGAACTGCAATGGTGGCGATGAAAGAAGTGATTCCTAATTACGGTCCTTTTTTCGTTGCGTCTTTTCGTTTAATTCCAGCTGGGTTTCTTCTTGTTGCTTTTGCTGCTTTTAGAGGAAGAGCTTTACCTTCTGGTTTCAATGCTTGGATTTCTATCGCAATATTCGCACTCGTCGATGCTGCTTGCTTTCAGGGGTTTCTTGCTGAAGGGTTGCAGAAGACTTCAGCTGGTTTGGGCAGTGTATGTTTGCATTTCATTTCTTACTCAATTTTGTTGTTACTAACTTACTTTGCAGCTTATAGTATAAGCGCTTTTTATGATAAGCGAAGCTATTTCTATAACAAAAAGTTAAGTTGTTTTGTTTTGTAAGCTATAAGCTGTTTTCATAAACTAGCTTAGAGAACTTATGAAAAATAAGCTGAAAACAGCTTATGAAGGTATCGTAAGTTGAATAGATGTGTTACTAGTTGAAAACAGTTTACAAAAATTGACCTTTTGTAGAATAGATATGTTACTAGTAGTACTATTAATAAGGGTTAAAAAAAATTAATGCATATATTTAGTAATTTGAATTAGAGCTTATAGTTAGGGTTAGGGACACATTTTTCTTTTCAAATGAAGCTTACATTTAGGGTCAGAGGTGGCATTATTGTTGTTGCTGCTTTGTTTTGTTGGAAATCAAGTGTGAGTGATAATGTCCCACATCGACTAGAAATGGAGGAAACGTTGGATATATAAGAGAGGAGACCCATAAACCCATTGCCTTAAAGTTTTGGGTAAGAGTGTGGTGTCTCTCTTTTAGCGGGTCCTAGACGTTTAGCCCATTGCCGCTCCAAGCGCTCCCCATAATCCCCAACATGTTTGGGTTTTTATGTCTAGTTCATGTGTCTTTGCTAGAGACTGTAGTGTAGTTCTTATTTGGTGCACATTGGATGGCTTAGTTTTATGTTGTAACCGGTGCACCAAATATGAATCCCCAACTTTTCCTCTAAGCCATCCAATGTGCACCAAATAAGAACTACACTGCAGTCTCTAGCAAAGACTGCCAGAATCCCCAACTTTTCCTCTAATCCATGTCTATCAATATGAATCTGTAAAATGTTGTTTGTGTTTCATATTGATAGATATGGATTAGAGGAAAAGTTGCTTTGAGTCAACTTTTTGTGTTGATTCGGATTCTAGATTGCAGTGAGAGAATTAATTGTTTTAATTGTTGCTTGTTTTGACTATCTGGCATCGATATATCGCAGGTTATTATTGATTCACAACCTTTGACGGTGGCTGTACTTGCTGCTTTGTTATTTGGTGAGTCCATTGGAGTTGTTGGAGCTGCCGGGCTTGTACTTGGCGTCGTAGGACTTGTGTTACTTGAGGTATTTTAATTTTGGTTTTAACCTAAAGGAAGTGTCTTAATTCGCATACCCTTTAAGCACAGCCCAAAATTAGAAATCAAAATCTTTTACATATATTGTGGATTGCGGAATGATATTTAGCTTATGTCTTGCTATAGTTAGTGCTGTCCACATCATACAATTACCTAGTTGATTTTGTAATTTTTAGCATACAATTTCTCTTGGACTAGACATTACCTTCTATGTTTATTCACTAAAGCAAACACTACTGGTTTTATTGCAGTTACCTGCCCTATCATTTGATGGGAGCAACTTCTCACTGTGGGGAAGTGGGGAGTGGTGGATGCTTCTTGCAGCTCAGAGCATGGCAGTTGGCACTGTCATGGTTCGGTGGGTCTCCAAGTACTCTGATCCTATCATGGCAACTGGATGGGTACGCTTCAAATCTCATTCTGACTCTAGTTTTTGATAATTTTATGCTATGAAACGGAACTTAATGATTAGTATTCCTTTTTCAATTAAAAATCAAGATGCATTTCTTCAAATGTACAAAATTATAGCTATTTTTCATTATATTTATTTTTGCGGTGTTTTGAGTGTCCTCAAGCCTTTTTGCGTTACAATTTAAAACGATACAATAAGTCCAGTTTACAAAAGTGTGAATTTGGGTGTGTTGGACTCTAATATATAGACCCTGAGTCCCTGATCATAGTTGCAGAAATATTTATTTCAGCATATGTTTCAACAATAAGTTTGTATACTGAAATAGTGAAATGATGATTATATAGGTGTTACGTTCATATATTAGTATTTATGCAAAAAATATCAATTTGTTAAAAAAAAAAAGAGGCATGGACATCTGAAAGGTCTCTCGTTGTTTAGGAACTCTCTGGAAGCTTGGTTCAAAACTTTACTATCCTTTTTCTTTTGCAGCATATGGTTATTGGTGGTCTCCCCCTTGTGGCATTCGCGATTCTTAACAATGAGCCTGCTGTAAGTGGGAGTCTTAAAGAGTACAGTTCAACGGATGTATTGGCACTCCTCTACACGTCCATTTTTGGAAGTGCTGTTAGCTATGGTGTGTTCTTTTACAGTGCAACTAAAGGTATGTATATCTTTCTGATCATGACCTCTCTCTTTTCCTTTCTGTGAATTTTCATTTATAGTCTTTAAATATATGAATTTCAACAAGGTGTCAGTTCAGTGTTAAGGATTTGACCTTGTAACCTTAAGGGATGTAGTTTAGATCACCTTGGGGACAGTTGTAAAATGGTTATTAGTGCCACTTTCTTTAAAAAAAAAAATTCCCCTCTCATTTTTTAAGAAAACATCCATGTAAAATCCAAAACGGTTAACCTCTTCAATATGGTAATTAGTATTATTGATTTATCTTTAGCCATTTTGTACACTTACATATTTGAACTTTATTTTTGTTTTTCAAAATTCTTATCGACCCATAAAGAATACACCATATTATTATTGACATTGTGCTTGTGATGCATTGCAGGTAGCTTGACAAAGCTCAGTTCACTTACATTTCTAACCCCAATGTTTGCCTCAATTTTCGGGTAAGACTGCCTAACAATGGGAAAGAGTTGCCGGGTTTTGTATTTTTTTTTTTTTTTTGGAATTATGTAGCAGAGAGAATAAAAATCAGAAAGACAACTAATGGCTATGTAGCAATTCTTTAAACGGAAGGCCATTCAAGAGAAAAAATTGACCATCTTTTACAATTATATATTTTTTTTAACAGAATAACACCCACTTACATCCTTCATAATTTATTGAAGTATCGTGCTCACAAGATCATAACTTTTTTGTACCTTTTGTCACCGGCATTTCCTCTAGAAAATTCAAATATTTTCTGTCAAATTACATGTTTGTGTATCTTTTTGAGGACCTTTGTATACACATTTTTTCGTTTGGTATTTCAGGTTTTTGTATCTCGGTGAGACATTCTCACCTGTACAGCTTGTTGGGGCCAGTGTTACTGTAGCTGCAATATACATGGTTAACTTCAGAAACACTTCAGAATGA

Protein sequence

>MS.gene55677.t1

MLSPWCCSTPFTTVTLTNTTTRRYSFTSHTPQFPSSRFSTTPSSLRFRIPCSNKTTGKSTESTDLELVDCVGTGQDVECLLTEEDEAKTEDESSSKRLCLGEALWEGAVLVSPFFFWGTAMVAMKEVIPNYGPFFVASFRLIPAGFLLVAFAAFRGRALPSGFNAWISIAIFALVDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGVVGLVLLELPALSFDGSNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVAFAILNNEPAVSGSLKEYSSTDVLALLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLVGASVTVAAIYMVNFRNTSE