Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528930 | AES69383.1 | 92.424 | 66 | 5 | 0 | 3 | 68 | 2 | 67 | 2.59e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528930 | G7IZD9 | 92.424 | 66 | 5 | 0 | 3 | 68 | 2 | 67 | 1.24e-31 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0528930 | -0.804499 | 2.097530e-49 | -8.615850e-47 |
| Msa0007810 | Msa0528930 | -0.801231 | 9.928498e-49 | -8.615850e-47 |
| Msa0011920 | Msa0528930 | -0.842436 | 2.588732e-58 | -8.615850e-47 |
| Msa0030050 | Msa0528930 | 0.804998 | 1.650697e-49 | -8.615850e-47 |
| Msa0037180 | Msa0528930 | 0.841893 | 3.604345e-58 | -8.615850e-47 |
| Msa0037650 | Msa0528930 | -0.828783 | 7.418500e-55 | -8.615850e-47 |
| Msa0042520 | Msa0528930 | -0.807170 | 5.760644e-50 | -8.615850e-47 |
| Msa0052780 | Msa0528930 | 0.842592 | 2.353942e-58 | -8.615850e-47 |
| Msa0059080 | Msa0528930 | 0.804732 | 1.875289e-49 | -8.615850e-47 |
| Msa0067590 | Msa0528930 | -0.840604 | 7.867487e-58 | -8.615850e-47 |
| Msa0074690 | Msa0528930 | 0.800439 | 1.440292e-48 | -8.615850e-47 |
| Msa0074860 | Msa0528930 | -0.804424 | 2.175050e-49 | -8.615850e-47 |
| Msa0075990 | Msa0528930 | -0.805294 | 1.430659e-49 | -8.615850e-47 |
| Msa0076640 | Msa0528930 | 0.813319 | 2.718094e-51 | -8.615850e-47 |
| Msa0081610 | Msa0528930 | -0.825546 | 4.418857e-54 | -8.615850e-47 |
| Msa0081700 | Msa0528930 | -0.803434 | 3.492376e-49 | -8.615850e-47 |
| Msa0087550 | Msa0528930 | 0.800091 | 1.695468e-48 | -8.615850e-47 |
| Msa0092220 | Msa0528930 | 0.835276 | 1.843329e-56 | -8.615850e-47 |
| Msa0097570 | Msa0528930 | 0.844232 | 8.585742e-59 | -8.615850e-47 |
| Msa0112880 | Msa0528930 | -0.826412 | 2.751931e-54 | -8.615850e-47 |
| Msa0127220 | Msa0528930 | -0.826827 | 2.190616e-54 | -8.615850e-47 |
| Msa0127350 | Msa0528930 | -0.805437 | 1.335663e-49 | -8.615850e-47 |
| Msa0127910 | Msa0528930 | -0.821125 | 4.768613e-53 | -8.615850e-47 |
| Msa0145430 | Msa0528930 | 0.845259 | 4.540395e-59 | -8.615850e-47 |
| Msa0150330 | Msa0528930 | 0.800753 | 1.243016e-48 | -8.615850e-47 |
| Msa0158890 | Msa0528930 | -0.818907 | 1.534175e-52 | -8.615850e-47 |
| Msa0159240 | Msa0528930 | -0.801367 | 9.311607e-49 | -8.615850e-47 |
| Msa0163540 | Msa0528930 | -0.808285 | 3.339402e-50 | -8.615850e-47 |
| Msa0168770 | Msa0528930 | -0.808121 | 3.618940e-50 | -8.615850e-47 |
| Msa0173950 | Msa0528930 | -0.832322 | 1.010172e-55 | -8.615850e-47 |
| Msa0174060 | Msa0528930 | -0.833587 | 4.896233e-56 | -8.615850e-47 |
| Msa0177320 | Msa0528930 | 0.825757 | 3.939295e-54 | -8.615850e-47 |
| Msa0178000 | Msa0528930 | 0.804734 | 1.874009e-49 | -8.615850e-47 |
| Msa0206040 | Msa0528930 | -0.822412 | 2.401433e-53 | -8.615850e-47 |
| Msa0216150 | Msa0528930 | -0.838515 | 2.747379e-57 | -8.615850e-47 |
| Msa0216340 | Msa0528930 | 0.835188 | 1.940535e-56 | -8.615850e-47 |
| Msa0389080 | Msa0528930 | -0.826828 | 2.189863e-54 | -8.615850e-47 |
| Msa0390590 | Msa0528930 | -0.821630 | 3.645721e-53 | -8.615850e-47 |
| Msa0399810 | Msa0528930 | 0.910281 | 2.232758e-82 | -8.615850e-47 |
| Msa0399820 | Msa0528930 | 0.872936 | 2.168240e-67 | -8.615850e-47 |
| Msa0403740 | Msa0528930 | -0.807941 | 3.951218e-50 | -8.615850e-47 |
| Msa0456450 | Msa0528930 | -0.804832 | 1.787595e-49 | -8.615850e-47 |
| Msa0458220 | Msa0528930 | 0.808482 | 3.030525e-50 | -8.615850e-47 |
| Msa0256540 | Msa0528930 | 0.813219 | 2.858741e-51 | -8.615850e-47 |
| Msa0293720 | Msa0528930 | 0.807160 | 5.789525e-50 | -8.615850e-47 |
| Msa0320230 | Msa0528930 | 0.801934 | 7.123812e-49 | -8.615850e-47 |
| Msa0326170 | Msa0528930 | -0.810541 | 1.094926e-50 | -8.615850e-47 |
| Msa0331070 | Msa0528930 | -0.805713 | 1.168952e-49 | -8.615850e-47 |
| Msa0334320 | Msa0528930 | 0.839912 | 1.192569e-57 | -8.615850e-47 |
| Msa0334450 | Msa0528930 | -0.838813 | 2.300193e-57 | -8.615850e-47 |
| Msa0340700 | Msa0528930 | -0.805763 | 1.140805e-49 | -8.615850e-47 |
| Msa0351050 | Msa0528930 | 0.806188 | 9.285566e-50 | -8.615850e-47 |
| Msa0362440 | Msa0528930 | -0.801755 | 7.752403e-49 | -8.615850e-47 |
| Msa0364030 | Msa0528930 | -0.807724 | 4.395192e-50 | -8.615850e-47 |
| Msa0504700 | Msa0528930 | 0.818852 | 1.578826e-52 | -8.615850e-47 |
| Msa0523420 | Msa0528930 | -0.812260 | 4.636338e-51 | -8.615850e-47 |
| Msa0526520 | Msa0528930 | -0.842992 | 1.842672e-58 | -8.615850e-47 |
| Msa0528930 | Msa0559690 | -0.801120 | 1.045962e-48 | -8.615850e-47 |
| Msa0528930 | Msa0563440 | 0.817615 | 3.007696e-52 | -8.615850e-47 |
| Msa0528930 | Msa0571900 | -0.820274 | 7.481354e-53 | -8.615850e-47 |
| Msa0528930 | Msa0572730 | -0.812823 | 3.491669e-51 | -8.615850e-47 |
| Msa0528930 | Msa0581350 | 0.802390 | 5.740278e-49 | -8.615850e-47 |
| Msa0528930 | Msa0582270 | -0.809898 | 1.506714e-50 | -8.615850e-47 |
| Msa0528930 | Msa0583270 | -0.805977 | 1.028746e-49 | -8.615850e-47 |
| Msa0528930 | Msa0588110 | -0.814611 | 1.410403e-51 | -8.615850e-47 |
| Msa0528930 | Msa0600350 | 0.805499 | 1.295872e-49 | -8.615850e-47 |
| Msa0528930 | Msa0616890 | -0.807628 | 4.606321e-50 | -8.615850e-47 |
| Msa0528930 | Msa0617470 | -0.807589 | 4.695135e-50 | -8.615850e-47 |
| Msa0528930 | Msa0621670 | -0.809237 | 2.089494e-50 | -8.615850e-47 |
| Msa0528930 | Msa0626920 | 0.809242 | 2.084688e-50 | -8.615850e-47 |
| Msa0528930 | Msa0638810 | 0.817163 | 3.801813e-52 | -8.615850e-47 |
| Msa0528930 | Msa0639530 | -0.800565 | 1.357600e-48 | -8.615850e-47 |
| Msa0528930 | Msa0667670 | -0.812749 | 3.625021e-51 | -8.615850e-47 |
| Msa0528930 | Msa0672980 | 0.823825 | 1.124137e-53 | -8.615850e-47 |
| Msa0528930 | Msa0690100 | -0.811431 | 7.025721e-51 | -8.615850e-47 |
| Msa0528930 | Msa0697510 | 0.804651 | 1.950368e-49 | -8.615850e-47 |
| Msa0528930 | Msa0701800 | -0.819980 | 8.731314e-53 | -8.615850e-47 |
| Msa0528930 | Msa0742370 | -0.809867 | 1.530132e-50 | -8.615850e-47 |
| Msa0528930 | Msa0772490 | 0.807536 | 4.818739e-50 | -8.615850e-47 |
| Msa0528930 | Msa0779450 | -0.837129 | 6.236940e-57 | -8.615850e-47 |
| Msa0528930 | Msa0801320 | -0.804433 | 2.165161e-49 | -8.615850e-47 |
| Msa0528930 | Msa0807100 | -0.800097 | 1.691273e-48 | -8.615850e-47 |
| Msa0528930 | Msa0807870 | -0.821074 | 4.897830e-53 | -8.615850e-47 |
| Msa0528930 | Msa0816630 | 0.811379 | 7.210427e-51 | -8.615850e-47 |
| Msa0528930 | Msa0826380 | 0.812167 | 4.858660e-51 | -8.615850e-47 |
| Msa0528930 | Msa0826450 | 0.801362 | 9.332954e-49 | -8.615850e-47 |
| Msa0528930 | Msa0844970 | -0.800005 | 1.765632e-48 | -8.615850e-47 |
| Msa0528930 | Msa0868050 | -0.803970 | 2.703278e-49 | -8.615850e-47 |
| Msa0528930 | Msa0869320 | -0.815767 | 7.810074e-52 | -8.615850e-47 |
| Msa0528930 | Msa0876790 | 0.811633 | 6.351536e-51 | -8.615850e-47 |
| Msa0528930 | Msa0934290 | -0.818709 | 1.701401e-52 | -8.615850e-47 |
| Msa0528930 | Msa0956600 | -0.815372 | 9.560333e-52 | -8.615850e-47 |
| Msa0528930 | Msa0969380 | 0.837896 | 3.965506e-57 | -8.615850e-47 |
| Msa0528930 | Msa0969590 | 0.850166 | 2.023642e-60 | -8.615850e-47 |
| Msa0528930 | Msa0969720 | 0.846764 | 1.769556e-59 | -8.615850e-47 |
| Msa0528930 | Msa0971780 | -0.828168 | 1.044186e-54 | -8.615850e-47 |
| Msa0528930 | Msa0975960 | 0.807044 | 6.126368e-50 | -8.615850e-47 |
| Msa0528930 | Msa1014550 | -0.823185 | 1.587085e-53 | -8.615850e-47 |
| Msa0528930 | Msa1029030 | -0.800345 | 1.505557e-48 | -8.615850e-47 |
| Msa0528930 | Msa1055520 | -0.850410 | 1.728901e-60 | -8.615850e-47 |
| Msa0528930 | Msa1078590 | -0.801659 | 8.111597e-49 | -8.615850e-47 |
| Msa0528930 | Msa1078760 | -0.804693 | 1.910836e-49 | -8.615850e-47 |
| Msa0528930 | Msa1088000 | -0.810828 | 9.494711e-51 | -8.615850e-47 |
| Msa0528930 | Msa1093190 | -0.809972 | 1.453015e-50 | -8.615850e-47 |
| Msa0528930 | Msa1104020 | -0.804651 | 1.950562e-49 | -8.615850e-47 |
| Msa0528930 | Msa1117770 | -0.817412 | 3.341528e-52 | -8.615850e-47 |
| Msa0528930 | Msa1121720 | -0.840632 | 7.737083e-58 | -8.615850e-47 |
| Msa0528930 | Msa1129120 | -0.822601 | 2.171332e-53 | -8.615850e-47 |
| Msa0528930 | Msa1156120 | -0.821692 | 3.527843e-53 | -8.615850e-47 |
| Msa0528930 | Msa1169590 | -0.807177 | 5.741417e-50 | -8.615850e-47 |
| Msa0528930 | Msa1173150 | 0.845961 | 2.929781e-59 | -8.615850e-47 |
| Msa0528930 | Msa1199540 | -0.817758 | 2.793296e-52 | -8.615850e-47 |
| Msa0528930 | Msa1202470 | 0.828160 | 1.049308e-54 | -8.615850e-47 |
| Msa0528930 | Msa1205270 | -0.814581 | 1.432310e-51 | -8.615850e-47 |
| Msa0528930 | Msa1236190 | -0.806021 | 1.007171e-49 | -8.615850e-47 |
| Msa0528930 | Msa1246480 | 0.816326 | 5.858911e-52 | -8.615850e-47 |
| Msa0528930 | Msa1249600 | 0.818607 | 1.794596e-52 | -8.615850e-47 |
| Msa0528930 | Msa1252000 | 0.812382 | 4.361257e-51 | -8.615850e-47 |
| Msa0528930 | Msa1254910 | 0.822845 | 1.905208e-53 | -8.615850e-47 |
| Msa0528930 | Msa1265020 | 0.806382 | 8.451498e-50 | -8.615850e-47 |
| Msa0528930 | Msa1273620 | -0.826162 | 3.155090e-54 | -8.615850e-47 |
| Msa0528930 | Msa1279200 | -0.805172 | 1.517783e-49 | -8.615850e-47 |
| Msa0528930 | Msa1290900 | 0.809512 | 1.824345e-50 | -8.615850e-47 |
| Msa0528930 | Msa1300370 | -0.800466 | 1.422524e-48 | -8.615850e-47 |
| Msa0528930 | Msa1305970 | -0.803161 | 3.979122e-49 | -8.615850e-47 |
| Msa0528930 | Msa1311600 | -0.821178 | 4.635977e-53 | -8.615850e-47 |
| Msa0528930 | Msa1326180 | 0.825849 | 3.746180e-54 | -8.615850e-47 |
| Msa0528930 | Msa1328680 | -0.809397 | 1.931079e-50 | -8.615850e-47 |
| Msa0528930 | Msa1342360 | -0.803328 | 3.673610e-49 | -8.615850e-47 |
| Msa0528930 | Msa1356100 | -0.838999 | 2.059822e-57 | -8.615850e-47 |
| Msa0528930 | Msa1363310 | -0.845271 | 4.505717e-59 | -8.615850e-47 |
| Msa0528930 | Msa1373310 | -0.816310 | 5.908374e-52 | -8.615850e-47 |
| Msa0528930 | Msa1377980 | -0.827038 | 1.950448e-54 | -8.615850e-47 |
| Msa0528930 | Msa1384410 | -0.826504 | 2.616471e-54 | -8.615850e-47 |
| Msa0528930 | Msa1386580 | -0.844888 | 5.718014e-59 | -8.615850e-47 |
| Msa0528930 | Msa1388720 | -0.820717 | 5.916979e-53 | -8.615850e-47 |
| Msa0528930 | Msa1398450 | -0.828182 | 1.036186e-54 | -8.615850e-47 |
| Msa0528930 | Msa1402300 | 0.805421 | 1.345934e-49 | -8.615850e-47 |
| Msa0528930 | Msa1408280 | -0.826564 | 2.531015e-54 | -8.615850e-47 |
| Msa0528930 | Msa1410480 | -0.813169 | 2.933215e-51 | -8.615850e-47 |
| Msa0528930 | Msa1410500 | -0.809177 | 2.152804e-50 | -8.615850e-47 |
| Msa0528930 | Msa1411370 | 0.813369 | 2.651077e-51 | -8.615850e-47 |
| Msa0528930 | Msa1414780 | -0.810556 | 1.086721e-50 | -8.615850e-47 |
| Msa0528930 | Msa1432730 | -0.802408 | 5.691807e-49 | -8.615850e-47 |
| Msa0528930 | Msa1439860 | 0.810267 | 1.254836e-50 | -8.615850e-47 |
| Msa0528930 | Msa1459130 | -0.820394 | 7.021078e-53 | -8.615850e-47 |
| Msa0528930 | Msa1459920 | 0.817445 | 3.285453e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528930 | MtrunA17_Chr3g0087921 | 92.424 | 66 | 5 | 0 | 3 | 68 | 2 | 67 | 2.38e-35 | 114 |
| Msa0528930 | MtrunA17_Chr3g0087931 | 87.692 | 65 | 8 | 0 | 4 | 68 | 3 | 67 | 2.15e-32 | 106 |
| Msa0528930 | MtrunA17_Chr3g0087911 | 87.692 | 65 | 8 | 0 | 4 | 68 | 3 | 67 | 5.50e-25 | 87.8 |
| Msa0528930 | MtrunA17_Chr3g0088251 | 75.385 | 65 | 14 | 2 | 6 | 68 | 2 | 66 | 1.61e-23 | 84.3 |
| Msa0528930 | MtrunA17_Chr3g0087981 | 72.727 | 66 | 16 | 2 | 5 | 68 | 3 | 68 | 1.66e-23 | 84.3 |
| Msa0528930 | MtrunA17_Chr3g0088031 | 78.689 | 61 | 11 | 2 | 10 | 68 | 1 | 61 | 1.88e-23 | 84.0 |
| Msa0528930 | MtrunA17_Chr3g0088011 | 79.661 | 59 | 9 | 2 | 13 | 68 | 8 | 66 | 4.66e-23 | 82.8 |
| Msa0528930 | MtrunA17_Chr3g0088021 | 73.438 | 64 | 15 | 2 | 7 | 68 | 3 | 66 | 2.67e-22 | 81.3 |
| Msa0528930 | MtrunA17_Chr3g0087941 | 83.824 | 68 | 11 | 0 | 1 | 68 | 1 | 68 | 1.00e-21 | 79.7 |
| Msa0528930 | MtrunA17_Chr3g0088041 | 93.182 | 44 | 3 | 0 | 25 | 68 | 23 | 66 | 1.68e-21 | 79.0 |
| Msa0528930 | MtrunA17_Chr3g0088271 | 82.979 | 47 | 8 | 0 | 22 | 68 | 19 | 65 | 2.75e-20 | 75.9 |
| Msa0528930 | MtrunA17_Chr3g0088071 | 79.167 | 48 | 10 | 0 | 21 | 68 | 19 | 66 | 8.92e-20 | 74.7 |
| Msa0528930 | MtrunA17_Chr3g0088081 | 88.095 | 42 | 5 | 0 | 27 | 68 | 24 | 65 | 1.19e-19 | 74.3 |
| Msa0528930 | MtrunA17_Chr3g0088001 | 76.923 | 65 | 14 | 1 | 5 | 68 | 3 | 67 | 1.48e-19 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 18 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACTATGAAGTTGTTCTT+TGG | 0.337246 | 4_1:+1914784 | Msa0528930:CDS |
| CCAGCATCAGGACCTGGTGC+TGG | 0.401353 | 4_1:-1914865 | None:intergenic |
| GCAAGTTCTGTGGCTATGAT+TGG | 0.405849 | 4_1:+1914904 | Msa0528930:CDS |
| CCAGCACCAGGTCCTGATGC+TGG | 0.415553 | 4_1:+1914865 | Msa0528930:CDS |
| GATCCGGCAGCTCCAGCATC+AGG | 0.425147 | 4_1:-1914877 | None:intergenic |
| GGTCCTGATGCTGGAGCTGC+CGG | 0.466366 | 4_1:+1914874 | Msa0528930:CDS |
| CACAGAACTTGCAACAGATC+CGG | 0.484083 | 4_1:-1914893 | None:intergenic |
| CGTCTTCGCCGCTGTAGTCT+CGG | 0.497571 | 4_1:+1914816 | Msa0528930:CDS |
| CTAACGACGGACTAAGGTCT+TGG | 0.503269 | 4_1:-1914840 | None:intergenic |
| CTGGAGCTAACGACGGACTA+AGG | 0.507562 | 4_1:-1914846 | None:intergenic |
| TAACGACGGACTAAGGTCTT+GGG | 0.525930 | 4_1:-1914839 | None:intergenic |
| GCAGCTCCAGCATCAGGACC+TGG | 0.550326 | 4_1:-1914871 | None:intergenic |
| CCGTCGTTAGCTCCAGCACC+AGG | 0.556130 | 4_1:+1914853 | Msa0528930:CDS |
| ACCAAAGAACAACTTCATAG+TGG | 0.593920 | 4_1:-1914785 | None:intergenic |
| CGGATCTGTTGCAAGTTCTG+TGG | 0.613339 | 4_1:+1914894 | Msa0528930:CDS |
| AAAGAACAACTTCATAGTGG+TGG | 0.644041 | 4_1:-1914782 | None:intergenic |
| CCTGGTGCTGGAGCTAACGA+CGG | 0.671877 | 4_1:-1914853 | None:intergenic |
| GTCTTGGGCCGAGACTACAG+CGG | 0.726320 | 4_1:-1914824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAAGAACAACTTCATAGTGG+TGG | - | chr4_1:1914785-1914804 | None:intergenic | 35.0% | |
| ACCACTATGAAGTTGTTCTT+TGG | + | chr4_1:1914784-1914803 | Msa0528930:CDS | 35.0% | |
| ACCAAAGAACAACTTCATAG+TGG | - | chr4_1:1914788-1914807 | None:intergenic | 35.0% | |
| !! | TAACGACGGACTAAGGTCTT+GGG | - | chr4_1:1914842-1914861 | None:intergenic | 45.0% |
| CACAGAACTTGCAACAGATC+CGG | - | chr4_1:1914896-1914915 | None:intergenic | 45.0% | |
| GCAAGTTCTGTGGCTATGAT+TGG | + | chr4_1:1914904-1914923 | Msa0528930:CDS | 45.0% | |
| !! | CTAACGACGGACTAAGGTCT+TGG | - | chr4_1:1914843-1914862 | None:intergenic | 50.0% |
| CGGATCTGTTGCAAGTTCTG+TGG | + | chr4_1:1914894-1914913 | Msa0528930:CDS | 50.0% | |
| !! | CTGGAGCTAACGACGGACTA+AGG | - | chr4_1:1914849-1914868 | None:intergenic | 55.0% |
| CGTCTTCGCCGCTGTAGTCT+CGG | + | chr4_1:1914816-1914835 | Msa0528930:CDS | 60.0% | |
| GTCTTGGGCCGAGACTACAG+CGG | - | chr4_1:1914827-1914846 | None:intergenic | 60.0% | |
| ! | CCTGGTGCTGGAGCTAACGA+CGG | - | chr4_1:1914856-1914875 | None:intergenic | 60.0% |
| CCGTCGTTAGCTCCAGCACC+AGG | + | chr4_1:1914853-1914872 | Msa0528930:CDS | 65.0% | |
| CCAGCATCAGGACCTGGTGC+TGG | - | chr4_1:1914868-1914887 | None:intergenic | 65.0% | |
| CCAGCACCAGGTCCTGATGC+TGG | + | chr4_1:1914865-1914884 | Msa0528930:CDS | 65.0% | |
| GCAGCTCCAGCATCAGGACC+TGG | - | chr4_1:1914874-1914893 | None:intergenic | 65.0% | |
| GGTCCTGATGCTGGAGCTGC+CGG | + | chr4_1:1914874-1914893 | Msa0528930:CDS | 65.0% | |
| GATCCGGCAGCTCCAGCATC+AGG | - | chr4_1:1914880-1914899 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 1914763 | 1914978 | 1914763 | ID=Msa0528930;Name=Msa0528930 |
| chr4_1 | mRNA | 1914763 | 1914978 | 1914763 | ID=Msa0528930-mRNA-1;Parent=Msa0528930;Name=Msa0528930-mRNA-1;_AED=0.31;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|71 |
| chr4_1 | exon | 1914763 | 1914978 | 1914763 | ID=Msa0528930-mRNA-1:exon:603;Parent=Msa0528930-mRNA-1 |
| chr4_1 | CDS | 1914763 | 1914978 | 1914763 | ID=Msa0528930-mRNA-1:cds;Parent=Msa0528930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
