Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906200 | XP_013450996.2 | 81.176 | 170 | 3 | 2 | 1 | 143 | 1 | 168 | 5.83e-90 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004920 | Msa0906200 | 0.807554 | 4.775788e-50 | -8.615850e-47 |
| Msa0006070 | Msa0906200 | 0.804500 | 2.096964e-49 | -8.615850e-47 |
| Msa0017510 | Msa0906200 | 0.847804 | 9.169368e-60 | -8.615850e-47 |
| Msa0025330 | Msa0906200 | 0.801265 | 9.770739e-49 | -8.615850e-47 |
| Msa0032430 | Msa0906200 | 0.806665 | 7.365299e-50 | -8.615850e-47 |
| Msa0068680 | Msa0906200 | 0.820496 | 6.653313e-53 | -8.615850e-47 |
| Msa0073530 | Msa0906200 | 0.812148 | 4.904610e-51 | -8.615850e-47 |
| Msa0074240 | Msa0906200 | 0.808975 | 2.377729e-50 | -8.615850e-47 |
| Msa0079380 | Msa0906200 | 0.802367 | 5.803169e-49 | -8.615850e-47 |
| Msa0086650 | Msa0906200 | 0.808477 | 3.038769e-50 | -8.615850e-47 |
| Msa0089630 | Msa0906200 | 0.838127 | 3.459290e-57 | -8.615850e-47 |
| Msa0107020 | Msa0906200 | 0.808134 | 3.595131e-50 | -8.615850e-47 |
| Msa0110970 | Msa0906200 | 0.816770 | 4.660387e-52 | -8.615850e-47 |
| Msa0112750 | Msa0906200 | 0.810809 | 9.585500e-51 | -8.615850e-47 |
| Msa0114060 | Msa0906200 | 0.803692 | 3.088371e-49 | -8.615850e-47 |
| Msa0116770 | Msa0906200 | 0.815281 | 1.001815e-51 | -8.615850e-47 |
| Msa0116850 | Msa0906200 | 0.809174 | 2.155752e-50 | -8.615850e-47 |
| Msa0604510 | Msa0906200 | 0.825891 | 3.660858e-54 | -8.615850e-47 |
| Msa0607050 | Msa0906200 | 0.837363 | 5.431449e-57 | -8.615850e-47 |
| Msa0621490 | Msa0906200 | 0.805441 | 1.332759e-49 | -8.615850e-47 |
| Msa0625720 | Msa0906200 | 0.813049 | 3.116447e-51 | -8.615850e-47 |
| Msa0627450 | Msa0906200 | 0.812249 | 4.661812e-51 | -8.615850e-47 |
| Msa0638070 | Msa0906200 | 0.803376 | 3.590179e-49 | -8.615850e-47 |
| Msa0650020 | Msa0906200 | 0.812166 | 4.859839e-51 | -8.615850e-47 |
| Msa0657970 | Msa0906200 | 0.837902 | 3.951347e-57 | -8.615850e-47 |
| Msa0662500 | Msa0906200 | 0.800929 | 1.144387e-48 | -8.615850e-47 |
| Msa0663390 | Msa0906200 | 0.818148 | 2.279760e-52 | -8.615850e-47 |
| Msa0677410 | Msa0906200 | 0.818521 | 1.876877e-52 | -8.615850e-47 |
| Msa0682330 | Msa0906200 | 0.803499 | 3.385712e-49 | -8.615850e-47 |
| Msa0683510 | Msa0906200 | 0.825685 | 4.096158e-54 | -8.615850e-47 |
| Msa0690150 | Msa0906200 | 0.821777 | 3.371577e-53 | -8.615850e-47 |
| Msa0693380 | Msa0906200 | 0.812458 | 4.197959e-51 | -8.615850e-47 |
| Msa0696640 | Msa0906200 | 0.814412 | 1.560853e-51 | -8.615850e-47 |
| Msa0708520 | Msa0906200 | 0.817013 | 4.108884e-52 | -8.615850e-47 |
| Msa0744040 | Msa0906200 | 0.808510 | 2.989016e-50 | -8.615850e-47 |
| Msa0756540 | Msa0906200 | 0.817784 | 2.755060e-52 | -8.615850e-47 |
| Msa0803890 | Msa0906200 | 0.822417 | 2.395650e-53 | -8.615850e-47 |
| Msa0824660 | Msa0906200 | 0.830759 | 2.450307e-55 | -8.615850e-47 |
| Msa0828560 | Msa0906200 | 0.826702 | 2.346686e-54 | -8.615850e-47 |
| Msa0136070 | Msa0906200 | 0.820039 | 8.467323e-53 | -8.615850e-47 |
| Msa0136100 | Msa0906200 | 0.809247 | 2.079177e-50 | -8.615850e-47 |
| Msa0142200 | Msa0906200 | 0.804380 | 2.221619e-49 | -8.615850e-47 |
| Msa0157290 | Msa0906200 | 0.847241 | 1.309644e-59 | -8.615850e-47 |
| Msa0159930 | Msa0906200 | 0.807939 | 3.956051e-50 | -8.615850e-47 |
| Msa0160130 | Msa0906200 | 0.800755 | 1.241963e-48 | -8.615850e-47 |
| Msa0165210 | Msa0906200 | 0.829826 | 4.142537e-55 | -8.615850e-47 |
| Msa0165220 | Msa0906200 | 0.820389 | 7.038908e-53 | -8.615850e-47 |
| Msa0172070 | Msa0906200 | 0.807479 | 4.954495e-50 | -8.615850e-47 |
| Msa0173990 | Msa0906200 | 0.814341 | 1.618930e-51 | -8.615850e-47 |
| Msa0197660 | Msa0906200 | 0.825807 | 3.831964e-54 | -8.615850e-47 |
| Msa0197930 | Msa0906200 | 0.810969 | 8.846747e-51 | -8.615850e-47 |
| Msa0212990 | Msa0906200 | 0.809010 | 2.336921e-50 | -8.615850e-47 |
| Msa0220580 | Msa0906200 | 0.804129 | 2.505135e-49 | -8.615850e-47 |
| Msa0222620 | Msa0906200 | 0.800694 | 1.277933e-48 | -8.615850e-47 |
| Msa0223690 | Msa0906200 | 0.812190 | 4.802737e-51 | -8.615850e-47 |
| Msa0227470 | Msa0906200 | 0.809132 | 2.200499e-50 | -8.615850e-47 |
| Msa0366240 | Msa0906200 | 0.804790 | 1.824502e-49 | -8.615850e-47 |
| Msa0380740 | Msa0906200 | 0.800857 | 1.183963e-48 | -8.615850e-47 |
| Msa0391030 | Msa0906200 | 0.801251 | 9.835745e-49 | -8.615850e-47 |
| Msa0392510 | Msa0906200 | 0.820674 | 6.054035e-53 | -8.615850e-47 |
| Msa0395790 | Msa0906200 | 0.816116 | 6.526328e-52 | -8.615850e-47 |
| Msa0395970 | Msa0906200 | 0.821333 | 4.268379e-53 | -8.615850e-47 |
| Msa0398710 | Msa0906200 | 0.825983 | 3.480922e-54 | -8.615850e-47 |
| Msa0403970 | Msa0906200 | 0.823411 | 1.405726e-53 | -8.615850e-47 |
| Msa0407920 | Msa0906200 | 0.828392 | 9.223208e-55 | -8.615850e-47 |
| Msa0410650 | Msa0906200 | 0.824037 | 1.002635e-53 | -8.615850e-47 |
| Msa0414170 | Msa0906200 | 0.814554 | 1.451947e-51 | -8.615850e-47 |
| Msa0417270 | Msa0906200 | 0.809084 | 2.253820e-50 | -8.615850e-47 |
| Msa0417880 | Msa0906200 | 0.815011 | 1.150210e-51 | -8.615850e-47 |
| Msa0419820 | Msa0906200 | 0.810680 | 1.022149e-50 | -8.615850e-47 |
| Msa0425010 | Msa0906200 | 0.805127 | 1.550817e-49 | -8.615850e-47 |
| Msa0428080 | Msa0906200 | 0.803459 | 3.450949e-49 | -8.615850e-47 |
| Msa0436050 | Msa0906200 | 0.824074 | 9.827667e-54 | -8.615850e-47 |
| Msa0440750 | Msa0906200 | 0.801027 | 1.092580e-48 | -8.615850e-47 |
| Msa0452920 | Msa0906200 | 0.814299 | 1.653199e-51 | -8.615850e-47 |
| Msa0461730 | Msa0906200 | 0.808923 | 2.439366e-50 | -8.615850e-47 |
| Msa0479170 | Msa0906200 | 0.806381 | 8.458146e-50 | -8.615850e-47 |
| Msa0481530 | Msa0906200 | 0.817522 | 3.157315e-52 | -8.615850e-47 |
| Msa0239800 | Msa0906200 | 0.822142 | 2.775282e-53 | -8.615850e-47 |
| Msa0240150 | Msa0906200 | 0.800125 | 1.668764e-48 | -8.615850e-47 |
| Msa0242430 | Msa0906200 | 0.803623 | 3.190859e-49 | -8.615850e-47 |
| Msa0243100 | Msa0906200 | 0.804686 | 1.917158e-49 | -8.615850e-47 |
| Msa0243890 | Msa0906200 | 0.805180 | 1.511781e-49 | -8.615850e-47 |
| Msa0260610 | Msa0906200 | 0.803725 | 3.040131e-49 | -8.615850e-47 |
| Msa0260670 | Msa0906200 | 0.806026 | 1.004533e-49 | -8.615850e-47 |
| Msa0264150 | Msa0906200 | 0.824551 | 7.592053e-54 | -8.615850e-47 |
| Msa0284420 | Msa0906200 | 0.800188 | 1.620490e-48 | -8.615850e-47 |
| Msa0287650 | Msa0906200 | 0.813500 | 2.480788e-51 | -8.615850e-47 |
| Msa0306300 | Msa0906200 | 0.831105 | 2.015791e-55 | -8.615850e-47 |
| Msa0309770 | Msa0906200 | 0.818773 | 1.645694e-52 | -8.615850e-47 |
| Msa0317510 | Msa0906200 | 0.827891 | 1.217515e-54 | -8.615850e-47 |
| Msa0330340 | Msa0906200 | 0.814651 | 1.381878e-51 | -8.615850e-47 |
| Msa0340090 | Msa0906200 | 0.803130 | 4.036790e-49 | -8.615850e-47 |
| Msa0345970 | Msa0906200 | 0.801458 | 8.919900e-49 | -8.615850e-47 |
| Msa0363350 | Msa0906200 | 0.800023 | 1.750758e-48 | -8.615850e-47 |
| Msa0484780 | Msa0906200 | 0.820744 | 5.835062e-53 | -8.615850e-47 |
| Msa0493250 | Msa0906200 | 0.814046 | 1.880474e-51 | -8.615850e-47 |
| Msa0495320 | Msa0906200 | 0.815506 | 8.926997e-52 | -8.615850e-47 |
| Msa0498060 | Msa0906200 | 0.813463 | 2.527219e-51 | -8.615850e-47 |
| Msa0503580 | Msa0906200 | 0.809835 | 1.554763e-50 | -8.615850e-47 |
| Msa0507680 | Msa0906200 | 0.823508 | 1.333567e-53 | -8.615850e-47 |
| Msa0509610 | Msa0906200 | 0.816020 | 6.858009e-52 | -8.615850e-47 |
| Msa0516320 | Msa0906200 | 0.812408 | 4.303729e-51 | -8.615850e-47 |
| Msa0526890 | Msa0906200 | 0.802065 | 6.696429e-49 | -8.615850e-47 |
| Msa0529890 | Msa0906200 | 0.815554 | 8.709403e-52 | -8.615850e-47 |
| Msa0546680 | Msa0906200 | 0.809348 | 1.977766e-50 | -8.615850e-47 |
| Msa0547320 | Msa0906200 | 0.805186 | 1.507523e-49 | -8.615850e-47 |
| Msa0557070 | Msa0906200 | 0.819770 | 9.753371e-53 | -8.615850e-47 |
| Msa0563560 | Msa0906200 | 0.815359 | 9.628356e-52 | -8.615850e-47 |
| Msa0585560 | Msa0906200 | 0.816039 | 6.790793e-52 | -8.615850e-47 |
| Msa0593650 | Msa0906200 | 0.810737 | 9.933658e-51 | -8.615850e-47 |
| Msa0597330 | Msa0906200 | 0.816213 | 6.210373e-52 | -8.615850e-47 |
| Msa0601750 | Msa0906200 | 0.817314 | 3.515621e-52 | -8.615850e-47 |
| Msa0858840 | Msa0906200 | 0.813783 | 2.149428e-51 | -8.615850e-47 |
| Msa0861920 | Msa0906200 | 0.800596 | 1.337933e-48 | -8.615850e-47 |
| Msa0867890 | Msa0906200 | 0.808709 | 2.710980e-50 | -8.615850e-47 |
| Msa0871270 | Msa0906200 | 0.838424 | 2.900509e-57 | -8.615850e-47 |
| Msa0876200 | Msa0906200 | 0.808731 | 2.681300e-50 | -8.615850e-47 |
| Msa0880140 | Msa0906200 | 0.844755 | 6.211174e-59 | -8.615850e-47 |
| Msa0888530 | Msa0906200 | 0.810489 | 1.123847e-50 | -8.615850e-47 |
| Msa0899980 | Msa0906200 | 0.803998 | 2.667600e-49 | -8.615850e-47 |
| Msa0902760 | Msa0906200 | 0.810249 | 1.266074e-50 | -8.615850e-47 |
| Msa0906200 | Msa0938220 | 0.839745 | 1.318166e-57 | -8.615850e-47 |
| Msa0906200 | Msa0975220 | 0.802212 | 6.245608e-49 | -8.615850e-47 |
| Msa0906200 | Msa0975340 | 0.822449 | 2.354468e-53 | -8.615850e-47 |
| Msa0906200 | Msa0979730 | 0.801815 | 7.536055e-49 | -8.615850e-47 |
| Msa0906200 | Msa0993290 | 0.812423 | 4.272601e-51 | -8.615850e-47 |
| Msa0906200 | Msa0993600 | 0.823083 | 1.676030e-53 | -8.615850e-47 |
| Msa0906200 | Msa1003750 | 0.820217 | 7.707329e-53 | -8.615850e-47 |
| Msa0906200 | Msa1007270 | 0.806373 | 8.490516e-50 | -8.615850e-47 |
| Msa0906200 | Msa1013400 | 0.815075 | 1.113273e-51 | -8.615850e-47 |
| Msa0906200 | Msa1053280 | 0.808149 | 3.568731e-50 | -8.615850e-47 |
| Msa0906200 | Msa1066490 | 0.802936 | 4.427883e-49 | -8.615850e-47 |
| Msa0906200 | Msa1075540 | 0.833218 | 6.050704e-56 | -8.615850e-47 |
| Msa0906200 | Msa1079590 | 0.808408 | 3.143758e-50 | -8.615850e-47 |
| Msa0906200 | Msa1082500 | 0.846638 | 1.915631e-59 | -8.615850e-47 |
| Msa0906200 | Msa1085200 | 0.823196 | 1.577528e-53 | -8.615850e-47 |
| Msa0906200 | Msa1085300 | 0.808301 | 3.312064e-50 | -8.615850e-47 |
| Msa0906200 | Msa1093530 | 0.811472 | 6.882980e-51 | -8.615850e-47 |
| Msa0906200 | Msa1098400 | 0.807809 | 4.216849e-50 | -8.615850e-47 |
| Msa0906200 | Msa1098420 | 0.804032 | 2.624687e-49 | -8.615850e-47 |
| Msa0906200 | Msa1104370 | 0.820775 | 5.738540e-53 | -8.615850e-47 |
| Msa0906200 | Msa1108280 | 0.823572 | 1.288587e-53 | -8.615850e-47 |
| Msa0906200 | Msa1123380 | 0.824156 | 9.404191e-54 | -8.615850e-47 |
| Msa0906200 | Msa1124050 | 0.803580 | 3.258203e-49 | -8.615850e-47 |
| Msa0906200 | Msa1131220 | 0.812209 | 4.757852e-51 | -8.615850e-47 |
| Msa0906200 | Msa1139810 | 0.804036 | 2.619767e-49 | -8.615850e-47 |
| Msa0906200 | Msa1147280 | 0.800281 | 1.551532e-48 | -8.615850e-47 |
| Msa0906200 | Msa1151910 | 0.806163 | 9.400468e-50 | -8.615850e-47 |
| Msa0906200 | Msa1162270 | 0.801997 | 6.913249e-49 | -8.615850e-47 |
| Msa0906200 | Msa1168160 | 0.802081 | 6.645123e-49 | -8.615850e-47 |
| Msa0906200 | Msa1179460 | 0.811783 | 5.890318e-51 | -8.615850e-47 |
| Msa0906200 | Msa1187840 | 0.803425 | 3.506857e-49 | -8.615850e-47 |
| Msa0906200 | Msa1193290 | 0.810182 | 1.309033e-50 | -8.615850e-47 |
| Msa0906200 | Msa1203250 | 0.808164 | 3.543792e-50 | -8.615850e-47 |
| Msa0906200 | Msa1209460 | 0.808801 | 2.590352e-50 | -8.615850e-47 |
| Msa0906200 | Msa1214890 | 0.814521 | 1.476736e-51 | -8.615850e-47 |
| Msa0906200 | Msa1222990 | 0.809220 | 2.106748e-50 | -8.615850e-47 |
| Msa0906200 | Msa1238470 | 0.800716 | 1.264762e-48 | -8.615850e-47 |
| Msa0906200 | Msa1238930 | 0.818204 | 2.214182e-52 | -8.615850e-47 |
| Msa0906200 | Msa1239920 | 0.809484 | 1.849329e-50 | -8.615850e-47 |
| Msa0906200 | Msa1242220 | 0.803014 | 4.267328e-49 | -8.615850e-47 |
| Msa0906200 | Msa1267960 | 0.829722 | 4.391976e-55 | -8.615850e-47 |
| Msa0906200 | Msa1271290 | 0.805571 | 1.251651e-49 | -8.615850e-47 |
| Msa0906200 | Msa1271990 | 0.801198 | 1.008055e-48 | -8.615850e-47 |
| Msa0906200 | Msa1283860 | 0.814828 | 1.263160e-51 | -8.615850e-47 |
| Msa0906200 | Msa1289280 | 0.802561 | 5.291929e-49 | -8.615850e-47 |
| Msa0906200 | Msa1300490 | 0.800959 | 1.128583e-48 | -8.615850e-47 |
| Msa0906200 | Msa1305340 | 0.800078 | 1.705990e-48 | -8.615850e-47 |
| Msa0906200 | Msa1308380 | 0.822277 | 2.582219e-53 | -8.615850e-47 |
| Msa0906200 | Msa1320410 | 0.803087 | 4.121676e-49 | -8.615850e-47 |
| Msa0906200 | Msa1322890 | 0.803838 | 2.879281e-49 | -8.615850e-47 |
| Msa0906200 | Msa1327680 | 0.804774 | 1.838404e-49 | -8.615850e-47 |
| Msa0906200 | Msa1331910 | 0.833578 | 4.920628e-56 | -8.615850e-47 |
| Msa0906200 | Msa1336110 | 0.801574 | 8.443814e-49 | -8.615850e-47 |
| Msa0906200 | Msa1346370 | 0.835172 | 1.959073e-56 | -8.615850e-47 |
| Msa0906200 | Msa1353980 | 0.805374 | 1.377020e-49 | -8.615850e-47 |
| Msa0906200 | Msa1382620 | 0.812717 | 3.684726e-51 | -8.615850e-47 |
| Msa0906200 | Msa1409870 | 0.802794 | 4.737607e-49 | -8.615850e-47 |
| Msa0906200 | Msa1423350 | 0.803659 | 3.136127e-49 | -8.615850e-47 |
| Msa0906200 | Msa1424750 | 0.809005 | 2.343190e-50 | -8.615850e-47 |
| Msa0906200 | Msa1438250 | 0.804840 | 1.780814e-49 | -8.615850e-47 |
| Msa0906200 | Msa1439320 | 0.800640 | 1.310930e-48 | -8.615850e-47 |
| Msa0906200 | Msa1452120 | 0.803823 | 2.900149e-49 | -8.615850e-47 |
| Msa0906200 | Msa1460020 | 0.833395 | 5.466967e-56 | -8.615850e-47 |
| Msa0906200 | Msa1461300 | 0.828302 | 9.698085e-55 | -8.615850e-47 |
| Msa0906200 | Msa1463670 | 0.807101 | 5.958581e-50 | -8.615850e-47 |
| Msa0906200 | Msa1464810 | 0.813146 | 2.966389e-51 | -8.615850e-47 |
| Msa0906200 | Msa1466540 | 0.804706 | 1.899098e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906200 | MtrunA17_Chr6g0454081 | 81.176 | 170 | 3 | 2 | 1 | 143 | 1 | 168 | 5.36e-94 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906200 | AT3G29280.1 | 58.278 | 151 | 36 | 1 | 16 | 139 | 24 | 174 | 2.99e-58 | 179 |
| Msa0906200 | AT3G29280.2 | 55.000 | 160 | 36 | 2 | 16 | 139 | 24 | 183 | 3.50e-55 | 171 |
Find 41 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTTCTGGGCTGGATTT+TGG | 0.147980 | 6_2:+4781341 | Msa0906200:CDS |
| GTTGGAAAGATGACAATTTC+TGG | 0.233986 | 6_2:+4781329 | Msa0906200:CDS |
| CTTCCTCATTCTACTTGTTA+TGG | 0.246023 | 6_2:+4776197 | Msa0906200:CDS |
| TATTTAACTTAATAGCTTAA+TGG | 0.248649 | 6_2:-4781421 | None:intergenic |
| ATTTAACTTAATAGCTTAAT+GGG | 0.305991 | 6_2:-4781420 | None:intergenic |
| TCTACTTGTTATGGTCTTCA+TGG | 0.312452 | 6_2:+4776206 | Msa0906200:CDS |
| CGAGCACATGTTTCTATTCC+AGG | 0.353050 | 6_2:-4781525 | None:intergenic |
| CACAGGTATGGTTGAACAAA+AGG | 0.398980 | 6_2:+4780698 | Msa0906200:CDS |
| ATGTTTGTGAGAATGGTAAT+TGG | 0.399760 | 6_2:-4775964 | None:intergenic |
| CTTCCAAACGGTTCAATCTC+AGG | 0.427063 | 6_2:+4776161 | Msa0906200:CDS |
| TTGGAAAGATGACAATTTCT+GGG | 0.446900 | 6_2:+4781330 | Msa0906200:CDS |
| CTGACCCATGTTTGTGAGAA+TGG | 0.452744 | 6_2:-4775971 | None:intergenic |
| ATGTGCTCGTCACTTATTGA+AGG | 0.469025 | 6_2:+4781539 | Msa0906200:three_prime_UTR |
| CACTGCGTTGATCATGCTCA+TGG | 0.469990 | 6_2:+4780341 | Msa0906200:CDS |
| TGTCCTGAGATTGAACCGTT+TGG | 0.473850 | 6_2:-4776164 | None:intergenic |
| GTGCGAAAGGGAATGCAGTA+AGG | 0.476356 | 6_2:+4780138 | Msa0906200:CDS |
| AAAGATGACAATTTCTGGGC+TGG | 0.478819 | 6_2:+4781334 | Msa0906200:CDS |
| TTGAATTATGCAGTTAACGT+TGG | 0.489090 | 6_2:+4781311 | Msa0906200:intron |
| AAACTATTCTGTAGAAAGGT+AGG | 0.495438 | 6_2:+4781476 | Msa0906200:three_prime_UTR |
| TGTTATGGTCTTCATGGCAC+TGG | 0.507081 | 6_2:+4776212 | Msa0906200:CDS |
| GCAGTAAGGGTGAGGACTAT+CGG | 0.514678 | 6_2:+4780152 | Msa0906200:CDS |
| TAGAAAACTATTCTGTAGAA+AGG | 0.514941 | 6_2:+4781472 | Msa0906200:three_prime_UTR |
| ACCTTTGCACTCTACAACAG+TGG | 0.516686 | 6_2:-4780300 | None:intergenic |
| TCAATAGCATTACTTCCAAA+CGG | 0.548406 | 6_2:+4776149 | Msa0906200:CDS |
| TGAAAGAATTGGAGTGCGAA+AGG | 0.552769 | 6_2:+4780125 | Msa0906200:intron |
| GGTATGGTTGAACAAAAGGA+TGG | 0.563367 | 6_2:+4780702 | Msa0906200:CDS |
| CAAGAAACAACAACAATGGA+AGG | 0.568539 | 6_2:+4776119 | Msa0906200:CDS |
| AATTACCATTCTCACAAACA+TGG | 0.574534 | 6_2:+4775966 | Msa0906200:exon |
| GGATAAGGAGATCACAGGTA+TGG | 0.582254 | 6_2:+4780686 | Msa0906200:CDS |
| GAAAGAATTGGAGTGCGAAA+GGG | 0.583284 | 6_2:+4780126 | Msa0906200:intron |
| ACAACAAGAAACAACAACAA+TGG | 0.584106 | 6_2:+4776115 | Msa0906200:CDS |
| AAGGGAATGCAGTAAGGGTG+AGG | 0.592308 | 6_2:+4780144 | Msa0906200:CDS |
| GCAAAGGTCATGATGCTGCT+CGG | 0.594994 | 6_2:+4780315 | Msa0906200:CDS |
| TGCGAAAGGGAATGCAGTAA+GGG | 0.601067 | 6_2:+4780139 | Msa0906200:CDS |
| ACTGCGTTGATCATGCTCAT+GGG | 0.607234 | 6_2:+4780342 | Msa0906200:CDS |
| AGTTGGGATAAGGAGATCAC+AGG | 0.611502 | 6_2:+4780681 | Msa0906200:intron |
| AGACCATAACAAGTAGAATG+AGG | 0.620403 | 6_2:-4776200 | None:intergenic |
| GCCACTGTTGTAGAGTGCAA+AGG | 0.635662 | 6_2:+4780299 | Msa0906200:CDS |
| GTATGGTTGAACAAAAGGAT+GGG | 0.653224 | 6_2:+4780703 | Msa0906200:CDS |
| ATTACCATTCTCACAAACAT+GGG | 0.654331 | 6_2:+4775967 | Msa0906200:exon |
| CATGAGCATGATCAACGCAG+TGG | 0.718511 | 6_2:-4780340 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTAATTGTATTTGTAT+TGG | + | chr6_2:4778661-4778680 | Msa0906200:intron | 10.0% |
| !!! | AAGATTAGATTTTAATTTAA+AGG | + | chr6_2:4778958-4778977 | Msa0906200:intron | 10.0% |
| !!! | AGATTAGATTTTAATTTAAA+GGG | + | chr6_2:4778959-4778978 | Msa0906200:intron | 10.0% |
| !! | AATGAAAAATGAAAATTAGA+GGG | - | chr6_2:4776061-4776080 | None:intergenic | 15.0% |
| !! | AAATGAAAAATGAAAATTAG+AGG | - | chr6_2:4776062-4776081 | None:intergenic | 15.0% |
| !!! | ATTTTGTTCAAAATCAAAAT+TGG | + | chr6_2:4776340-4776359 | Msa0906200:intron | 15.0% |
| !!! | TTTTGTTCAAAATCAAAATT+GGG | + | chr6_2:4776341-4776360 | Msa0906200:intron | 15.0% |
| !! | TTATTTATATAAGCTGTTAT+AGG | + | chr6_2:4779346-4779365 | Msa0906200:intron | 15.0% |
| !!! | TTGACTTTTACTATTTTATT+TGG | + | chr6_2:4779560-4779579 | Msa0906200:intron | 15.0% |
| !! | ATTGAATAATTACTTATGTA+TGG | + | chr6_2:4780081-4780100 | Msa0906200:intron | 15.0% |
| !!! | GGAAAATAAATTTTATGTAA+AGG | - | chr6_2:4780395-4780414 | None:intergenic | 15.0% |
| !!! | TACTTTTTTTATAACTCTAT+TGG | + | chr6_2:4780983-4781002 | Msa0906200:intron | 15.0% |
| !!! | AAAACCTTAAAATATTTTGA+AGG | - | chr6_2:4781131-4781150 | None:intergenic | 15.0% |
| !!! | ATTTAACTTAATAGCTTAAT+GGG | - | chr6_2:4781423-4781442 | None:intergenic | 15.0% |
| !!! | TATTTAACTTAATAGCTTAA+TGG | - | chr6_2:4781424-4781443 | None:intergenic | 15.0% |
| !!! | TGAGATTTTACGTTAAAAAA+AGG | + | chr6_2:4776409-4776428 | Msa0906200:intron | 20.0% |
| !!! | GAGATTTTACGTTAAAAAAA+GGG | + | chr6_2:4776410-4776429 | Msa0906200:intron | 20.0% |
| !!! | GCAAAAAAATGATCTTTTTT+AGG | + | chr6_2:4776463-4776482 | Msa0906200:intron | 20.0% |
| !! | ACAATCAAAGCTAAAAAAAT+TGG | + | chr6_2:4778518-4778537 | Msa0906200:intron | 20.0% |
| !! | CAAATACAATTAATATAAGC+AGG | - | chr6_2:4778658-4778677 | None:intergenic | 20.0% |
| !!! | AATTGTATTTGTATTGGTAT+AGG | + | chr6_2:4778667-4778686 | Msa0906200:intron | 20.0% |
| !! | AGCTTAATTCTTAATGATAA+TGG | + | chr6_2:4778798-4778817 | Msa0906200:intron | 20.0% |
| !!! | ATTAGTGTCATAAATTTTGT+AGG | + | chr6_2:4779194-4779213 | Msa0906200:intron | 20.0% |
| !!! | ACTTTTACTATTTTATTTGG+TGG | + | chr6_2:4779563-4779582 | Msa0906200:intron | 20.0% |
| !!! | CTTTTACTATTTTATTTGGT+GGG | + | chr6_2:4779564-4779583 | Msa0906200:intron | 20.0% |
| !! | AACATACAAATTAATCAACA+AGG | - | chr6_2:4779991-4780010 | None:intergenic | 20.0% |
| !! | CTGTTATATCAAAAACATAT+AGG | - | chr6_2:4780264-4780283 | None:intergenic | 20.0% |
| !!! | TTATTTTGATTCCTATAGTT+TGG | - | chr6_2:4780451-4780470 | None:intergenic | 20.0% |
| !! | TAGGAATCAAAATAAAAATC+TGG | + | chr6_2:4780456-4780475 | Msa0906200:intron | 20.0% |
| !! | TAATGTAATCAAAGAGAAAT+CGG | - | chr6_2:4780619-4780638 | None:intergenic | 20.0% |
| !!! | AAGTCCTTCAAAATATTTTA+AGG | + | chr6_2:4781124-4781143 | Msa0906200:intron | 20.0% |
| ! | TCATGCTTTAACATTCTTTA+AGG | + | chr6_2:4776260-4776279 | Msa0906200:intron | 25.0% |
| !!! | AAAAAAGGGTTTTTTTGTGA+TGG | + | chr6_2:4776424-4776443 | Msa0906200:intron | 25.0% |
| !!! | AAAAAGGGTTTTTTTGTGAT+GGG | + | chr6_2:4776425-4776444 | Msa0906200:intron | 25.0% |
| !!! | AAGATCATTTTTTTGCAACA+GGG | - | chr6_2:4776459-4776478 | None:intergenic | 25.0% |
| !!! | AAAGATCATTTTTTTGCAAC+AGG | - | chr6_2:4776460-4776479 | None:intergenic | 25.0% |
| !! | TAAAACACGAATTAGTTTCA+GGG | - | chr6_2:4776501-4776520 | None:intergenic | 25.0% |
| !!! | ACCCTAAAAACTGTTTTTTT+AGG | + | chr6_2:4776594-4776613 | Msa0906200:intron | 25.0% |
| !! | CCCTAAAAAAACAGTTTTTA+GGG | - | chr6_2:4776598-4776617 | None:intergenic | 25.0% |
| !!! | CCCTAAAAACTGTTTTTTTA+GGG | + | chr6_2:4776595-4776614 | Msa0906200:intron | 25.0% |
| !! | ACCCTAAAAAAACAGTTTTT+AGG | - | chr6_2:4776599-4776618 | None:intergenic | 25.0% |
| !!! | TGGTTTAGATTCTAAGATAA+TGG | + | chr6_2:4776731-4776750 | Msa0906200:intron | 25.0% |
| !!! | GGTTTAGATTCTAAGATAAT+GGG | + | chr6_2:4776732-4776751 | Msa0906200:intron | 25.0% |
| !!! | GTTTAGATTCTAAGATAATG+GGG | + | chr6_2:4776733-4776752 | Msa0906200:intron | 25.0% |
| ! | CTGTCAAATATTTACCTTTA+AGG | - | chr6_2:4777262-4777281 | None:intergenic | 25.0% |
| ! | TTCAAAAAGAATGTTCTCAT+GGG | - | chr6_2:4777416-4777435 | None:intergenic | 25.0% |
| !! | ATCATCTTAAAGAGTTTGTT+AGG | - | chr6_2:4777470-4777489 | None:intergenic | 25.0% |
| !!! | TAACAAACTCTTTAAGATGA+TGG | + | chr6_2:4777469-4777488 | Msa0906200:intron | 25.0% |
| !!! | TTTTAGCCTTTATTCATTCA+AGG | + | chr6_2:4777699-4777718 | Msa0906200:intron | 25.0% |
| !! | TTTAGCCTTTATTCATTCAA+GGG | + | chr6_2:4777700-4777719 | Msa0906200:intron | 25.0% |
| !!! | AAACAGTGAATTACTTTTCA+CGG | - | chr6_2:4778179-4778198 | None:intergenic | 25.0% |
| ! | GTCTAGAAAATTGTATAACA+AGG | + | chr6_2:4778349-4778368 | Msa0906200:intron | 25.0% |
| ! | AGAAAATTGTATAACAAGGA+TGG | + | chr6_2:4778353-4778372 | Msa0906200:intron | 25.0% |
| !! | AACTTGATGATTTCGATAAA+CGG | + | chr6_2:4778412-4778431 | Msa0906200:intron | 25.0% |
| ! | AATTAATATAAGCAGGTAGT+AGG | - | chr6_2:4778651-4778670 | None:intergenic | 25.0% |
| ! | AATTGCATATGACTTTCTTA+TGG | + | chr6_2:4779090-4779109 | Msa0906200:intron | 25.0% |
| ! | ATTGCATATGACTTTCTTAT+GGG | + | chr6_2:4779091-4779110 | Msa0906200:intron | 25.0% |
| !! | CCAAAATGAAGATTTTACTA+GGG | - | chr6_2:4779276-4779295 | None:intergenic | 25.0% |
| !! | ACCAAAATGAAGATTTTACT+AGG | - | chr6_2:4779277-4779296 | None:intergenic | 25.0% |
| ! | TATAGGAAGCTTATTGTAAT+AGG | + | chr6_2:4779363-4779382 | Msa0906200:intron | 25.0% |
| ! | ATTCTCTACTTAAAGGAAAT+TGG | - | chr6_2:4779484-4779503 | None:intergenic | 25.0% |
| ! | CCTTTAAGTAGAGAATATAT+CGG | + | chr6_2:4779488-4779507 | Msa0906200:intron | 25.0% |
| !!! | TATATCGGTGCATATTTTTA+TGG | + | chr6_2:4779503-4779522 | Msa0906200:intron | 25.0% |
| !!! | AATAATAGAACTGGCTTTTA+AGG | - | chr6_2:4779759-4779778 | None:intergenic | 25.0% |
| ! | CAAGAAAGTAATAATAGAAC+TGG | - | chr6_2:4779768-4779787 | None:intergenic | 25.0% |
| ! | CAAAATTACTGTAAAGAGAA+TGG | - | chr6_2:4780045-4780064 | None:intergenic | 25.0% |
| !!! | CTTTTTTATGGTGAAAGAAT+TGG | + | chr6_2:4780114-4780133 | Msa0906200:intron | 25.0% |
| ! | TAGAAAACTATTCTGTAGAA+AGG | + | chr6_2:4781472-4781491 | Msa0906200:three_prime_UTR | 25.0% |
| ATGTTTGTGAGAATGGTAAT+TGG | - | chr6_2:4775967-4775986 | None:intergenic | 30.0% | |
| AATTACCATTCTCACAAACA+TGG | + | chr6_2:4775966-4775985 | Msa0906200:exon | 30.0% | |
| ATTACCATTCTCACAAACAT+GGG | + | chr6_2:4775967-4775986 | Msa0906200:exon | 30.0% | |
| TTTCATCTGAATGTAGAAGA+AGG | - | chr6_2:4776085-4776104 | None:intergenic | 30.0% | |
| ACAACAAGAAACAACAACAA+TGG | + | chr6_2:4776115-4776134 | Msa0906200:CDS | 30.0% | |
| TCAATAGCATTACTTCCAAA+CGG | + | chr6_2:4776149-4776168 | Msa0906200:CDS | 30.0% | |
| AGATCGTAGAATCCTAAAAT+CGG | + | chr6_2:4776377-4776396 | Msa0906200:intron | 30.0% | |
| !!! | TCATTGATTCTACCGATTTT+AGG | - | chr6_2:4776392-4776411 | None:intergenic | 30.0% |
| ! | CTAAAACACGAATTAGTTTC+AGG | - | chr6_2:4776502-4776521 | None:intergenic | 30.0% |
| ! | TGTCTTTGAACTCAGTTTTA+GGG | - | chr6_2:4776564-4776583 | None:intergenic | 30.0% |
| ! | TTGTCTTTGAACTCAGTTTT+AGG | - | chr6_2:4776565-4776584 | None:intergenic | 30.0% |
| GAAACTCTAAACCTAATTTC+TGG | + | chr6_2:4776626-4776645 | Msa0906200:intron | 30.0% | |
| ATGAAGCTAAACCAGAAATT+AGG | - | chr6_2:4776640-4776659 | None:intergenic | 30.0% | |
| !! | TGCCTTTGAACTCATTTTTA+GGG | - | chr6_2:4776682-4776701 | None:intergenic | 30.0% |
| !! | TTGCCTTTGAACTCATTTTT+AGG | - | chr6_2:4776683-4776702 | None:intergenic | 30.0% |
| TAAACCATCATTTCCAGAAA+AGG | - | chr6_2:4776718-4776737 | None:intergenic | 30.0% | |
| ACCAAATCAGTAACATTCTT+TGG | - | chr6_2:4776759-4776778 | None:intergenic | 30.0% | |
| !! | GAATGTTACTGATTTGGTTA+TGG | + | chr6_2:4776761-4776780 | Msa0906200:intron | 30.0% |
| AAATGATGTTGAAGTTTGTG+AGG | + | chr6_2:4776896-4776915 | Msa0906200:intron | 30.0% | |
| AATGATGTTGAAGTTTGTGA+GGG | + | chr6_2:4776897-4776916 | Msa0906200:intron | 30.0% | |
| !! | GAGTTGGTGAAAAAAGAAAA+GGG | + | chr6_2:4776997-4777016 | Msa0906200:intron | 30.0% |
| AAAAAGAAAAGGGAATGAAG+TGG | + | chr6_2:4777007-4777026 | Msa0906200:intron | 30.0% | |
| !! | GTTCTAGAGATGATTTGAAA+AGG | + | chr6_2:4777039-4777058 | Msa0906200:intron | 30.0% |
| GTTTATTACTATGTGTGAGT+TGG | + | chr6_2:4777193-4777212 | Msa0906200:intron | 30.0% | |
| !! | AGAAGAAGTTAAGTTGACAA+GGG | + | chr6_2:4777280-4777299 | Msa0906200:intron | 30.0% |
| AGAGCTATATGGAAGATAAA+AGG | + | chr6_2:4777320-4777339 | Msa0906200:intron | 30.0% | |
| GAGCTATATGGAAGATAAAA+GGG | + | chr6_2:4777321-4777340 | Msa0906200:intron | 30.0% | |
| TTAGTATGTTCCTCTTCTTT+GGG | - | chr6_2:4777376-4777395 | None:intergenic | 30.0% | |
| TTTAGTATGTTCCTCTTCTT+TGG | - | chr6_2:4777377-4777396 | None:intergenic | 30.0% | |
| CTTCAAAAAGAATGTTCTCA+TGG | - | chr6_2:4777417-4777436 | None:intergenic | 30.0% | |
| ATGAAATTGTTGAAGAGGTT+GGG | + | chr6_2:4777492-4777511 | Msa0906200:intron | 30.0% | |
| TTGTATTGTCTGTCACAATT+TGG | - | chr6_2:4777532-4777551 | None:intergenic | 30.0% | |
| ACACACAATTGAGATGATAT+TGG | + | chr6_2:4777622-4777641 | Msa0906200:intron | 30.0% | |
| GTAATTGTCTCTTCATGAAT+GGG | - | chr6_2:4777665-4777684 | None:intergenic | 30.0% | |
| TGTAATTGTCTCTTCATGAA+TGG | - | chr6_2:4777666-4777685 | None:intergenic | 30.0% | |
| TCATGAAGAGACAATTACAA+AGG | + | chr6_2:4777667-4777686 | Msa0906200:intron | 30.0% | |
| CTTCACTAAAGGAATAGATT+TGG | + | chr6_2:4777748-4777767 | Msa0906200:intron | 30.0% | |
| CATGAATACAACCTAAAGTT+AGG | - | chr6_2:4777808-4777827 | None:intergenic | 30.0% | |
| !! | TTTCAGTTTTATGCATCTAC+AGG | + | chr6_2:4778206-4778225 | Msa0906200:intron | 30.0% |
| TTAATATCACCTCTAAATCC+AGG | - | chr6_2:4778318-4778337 | None:intergenic | 30.0% | |
| GGTGATATTAAAGTTAAACG+TGG | + | chr6_2:4778327-4778346 | Msa0906200:intron | 30.0% | |
| ! | ACTTGATGATTTCGATAAAC+GGG | + | chr6_2:4778413-4778432 | Msa0906200:intron | 30.0% |
| ! | ATAAATGGATTCCTTCACAT+TGG | + | chr6_2:4778475-4778494 | Msa0906200:intron | 30.0% |
| TTCAAAATTAGCCGAGAAAA+AGG | + | chr6_2:4778757-4778776 | Msa0906200:intron | 30.0% | |
| ! | CCCTTAATTTTCCTTTTTCT+CGG | - | chr6_2:4778771-4778790 | None:intergenic | 30.0% |
| CCGAGAAAAAGGAAAATTAA+GGG | + | chr6_2:4778768-4778787 | Msa0906200:intron | 30.0% | |
| !! | AATGATAATGGAGACATTGA+AGG | + | chr6_2:4778810-4778829 | Msa0906200:intron | 30.0% |
| ATTGAGATGAAGATGAAGAT+TGG | + | chr6_2:4778931-4778950 | Msa0906200:intron | 30.0% | |
| ! | TGAAGATTTTACTAGGGATT+GGG | - | chr6_2:4779270-4779289 | None:intergenic | 30.0% |
| ! | ATGAAGATTTTACTAGGGAT+TGG | - | chr6_2:4779271-4779290 | None:intergenic | 30.0% |
| ! | CCCTAGTAAAATCTTCATTT+TGG | + | chr6_2:4779273-4779292 | Msa0906200:intron | 30.0% |
| CTTTACACGCAAATTAAGAA+GGG | - | chr6_2:4779301-4779320 | None:intergenic | 30.0% | |
| ACTTTACACGCAAATTAAGA+AGG | - | chr6_2:4779302-4779321 | None:intergenic | 30.0% | |
| CCGATATATTCTCTACTTAA+AGG | - | chr6_2:4779491-4779510 | None:intergenic | 30.0% | |
| !! | TATTTTATTTGGTGGGTCAA+GGG | + | chr6_2:4779571-4779590 | Msa0906200:intron | 30.0% |
| ATTACTTTCTTGTATACCCT+TGG | + | chr6_2:4779776-4779795 | Msa0906200:intron | 30.0% | |
| AAATTCAACCATTTGACCAA+GGG | - | chr6_2:4779795-4779814 | None:intergenic | 30.0% | |
| AAAATTCAACCATTTGACCA+AGG | - | chr6_2:4779796-4779815 | None:intergenic | 30.0% | |
| TTTCACCATAAAAAAGACAG+AGG | - | chr6_2:4780110-4780129 | None:intergenic | 30.0% | |
| GTTTGTAAAACTAGGTACAT+AGG | - | chr6_2:4780597-4780616 | None:intergenic | 30.0% | |
| !! | AGAAATCGGTTTGTAAAACT+AGG | - | chr6_2:4780605-4780624 | None:intergenic | 30.0% |
| ! | CATTCACCTTTTTAACAGTT+GGG | + | chr6_2:4780665-4780684 | Msa0906200:intron | 30.0% |
| GTTATAGTTTCATGTCAGTT+CGG | + | chr6_2:4781017-4781036 | Msa0906200:intron | 30.0% | |
| CATTTAAGCAAATCAGAACT+AGG | - | chr6_2:4781253-4781272 | None:intergenic | 30.0% | |
| ! | CTTGACTCTTATATTTTGCT+TGG | + | chr6_2:4781284-4781303 | Msa0906200:intron | 30.0% |
| TTGAATTATGCAGTTAACGT+TGG | + | chr6_2:4781311-4781330 | Msa0906200:intron | 30.0% | |
| TTGGAAAGATGACAATTTCT+GGG | + | chr6_2:4781330-4781349 | Msa0906200:CDS | 30.0% | |
| AAACTATTCTGTAGAAAGGT+AGG | + | chr6_2:4781476-4781495 | Msa0906200:three_prime_UTR | 30.0% | |
| !!! | CTATTCCAGGATGATTTTTT+GGG | - | chr6_2:4781515-4781534 | None:intergenic | 30.0% |
| !!! | TCTATTCCAGGATGATTTTT+TGG | - | chr6_2:4781516-4781535 | None:intergenic | 30.0% |
| GATTGTGATTGAATGAAGTG+AGG | - | chr6_2:4776006-4776025 | None:intergenic | 35.0% | |
| CAAGAAACAACAACAATGGA+AGG | + | chr6_2:4776119-4776138 | Msa0906200:CDS | 35.0% | |
| ! | CTTCCTCATTCTACTTGTTA+TGG | + | chr6_2:4776197-4776216 | Msa0906200:CDS | 35.0% |
| AGACCATAACAAGTAGAATG+AGG | - | chr6_2:4776203-4776222 | None:intergenic | 35.0% | |
| !! | TCTACTTGTTATGGTCTTCA+TGG | + | chr6_2:4776206-4776225 | Msa0906200:CDS | 35.0% |
| TTCACTGAGTTTCTTTCTCT+TGG | + | chr6_2:4776528-4776547 | Msa0906200:intron | 35.0% | |
| TGCCCTAAAAATGAGTTCAA+AGG | + | chr6_2:4776677-4776696 | Msa0906200:intron | 35.0% | |
| !! | GATTCCTTTTCTGGAAATGA+TGG | + | chr6_2:4776711-4776730 | Msa0906200:intron | 35.0% |
| ! | GCCAAAGAATGTTACTGATT+TGG | + | chr6_2:4776755-4776774 | Msa0906200:intron | 35.0% |
| ! | TTATGCGTTTTTACGTCACT+TGG | + | chr6_2:4776857-4776876 | Msa0906200:intron | 35.0% |
| ! | TGATTTGCAAGAGAGTAATG+AGG | + | chr6_2:4776962-4776981 | Msa0906200:intron | 35.0% |
| !! | CGAGTTGGTGAAAAAAGAAA+AGG | + | chr6_2:4776996-4777015 | Msa0906200:intron | 35.0% |
| CTAGAGATGATTTGAAAAGG+AGG | + | chr6_2:4777042-4777061 | Msa0906200:intron | 35.0% | |
| ATGGTTAAGAAGACTTTGAG+AGG | + | chr6_2:4777098-4777117 | Msa0906200:intron | 35.0% | |
| ! | TGGTTAAGAAGACTTTGAGA+GGG | + | chr6_2:4777099-4777118 | Msa0906200:intron | 35.0% |
| TTGGTTTCAAGACATGGATT+AGG | + | chr6_2:4777212-4777231 | Msa0906200:intron | 35.0% | |
| TTAAGGTCATCAAAAGAAGG+TGG | - | chr6_2:4777245-4777264 | None:intergenic | 35.0% | |
| !! | CCTTTAAGGTCATCAAAAGA+AGG | - | chr6_2:4777248-4777267 | None:intergenic | 35.0% |
| !! | CCTTCTTTTGATGACCTTAA+AGG | + | chr6_2:4777245-4777264 | Msa0906200:intron | 35.0% |
| !! | CAGAAGAAGTTAAGTTGACA+AGG | + | chr6_2:4777279-4777298 | Msa0906200:intron | 35.0% |
| TGGAAGAACATAGAGCTATA+TGG | + | chr6_2:4777309-4777328 | Msa0906200:intron | 35.0% | |
| CAACATATTTGACGCATCAA+CGG | - | chr6_2:4777441-4777460 | None:intergenic | 35.0% | |
| GATGGATGAAATTGTTGAAG+AGG | + | chr6_2:4777487-4777506 | Msa0906200:intron | 35.0% | |
| GATGAAATTGTTGAAGAGGT+TGG | + | chr6_2:4777491-4777510 | Msa0906200:intron | 35.0% | |
| TGAAATTGTTGAAGAGGTTG+GGG | + | chr6_2:4777493-4777512 | Msa0906200:intron | 35.0% | |
| ACAACATACTACAAAGTTGC+TGG | + | chr6_2:4777548-4777567 | Msa0906200:intron | 35.0% | |
| AGAAGCCCTTGAATGAATAA+AGG | - | chr6_2:4777708-4777727 | None:intergenic | 35.0% | |
| !! | AGGAATAGATTTGGTGAAAC+AGG | + | chr6_2:4777757-4777776 | Msa0906200:intron | 35.0% |
| !! | GGAATAGATTTGGTGAAACA+GGG | + | chr6_2:4777758-4777777 | Msa0906200:intron | 35.0% |
| ACCTAAAGTTAGGTAAGATG+CGG | - | chr6_2:4777798-4777817 | None:intergenic | 35.0% | |
| !! | TTTTAAAAGTGCACATCCTC+TGG | + | chr6_2:4777961-4777980 | Msa0906200:intron | 35.0% |
| TTGTTTGGTCAGTTCAATAG+AGG | + | chr6_2:4777994-4778013 | Msa0906200:intron | 35.0% | |
| GAAAGGTAAATATGTCATGC+AGG | + | chr6_2:4778097-4778116 | Msa0906200:intron | 35.0% | |
| !! | TTACTTTTCACGGTCAAACA+AGG | - | chr6_2:4778169-4778188 | None:intergenic | 35.0% |
| CCAGGACTATAGTGATATTT+GGG | - | chr6_2:4778300-4778319 | None:intergenic | 35.0% | |
| TCCAGGACTATAGTGATATT+TGG | - | chr6_2:4778301-4778320 | None:intergenic | 35.0% | |
| ! | TCAATCTTAGCTCTTTCTTC+GGG | - | chr6_2:4778387-4778406 | None:intergenic | 35.0% |
| ! | CTCAATCTTAGCTCTTTCTT+CGG | - | chr6_2:4778388-4778407 | None:intergenic | 35.0% |
| TGTCAAGCTCAATATACGAA+TGG | - | chr6_2:4778544-4778563 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | - | chr6_2:4778601-4778620 | None:intergenic | 35.0% | |
| CTAAGAGAAGAAACCATTTG+AGG | + | chr6_2:4778696-4778715 | Msa0906200:intron | 35.0% | |
| GCCGAGAAAAAGGAAAATTA+AGG | + | chr6_2:4778767-4778786 | Msa0906200:intron | 35.0% | |
| AGACATTGAAGGTTTAGATG+TGG | + | chr6_2:4778821-4778840 | Msa0906200:intron | 35.0% | |
| TCAGATAGAGACTTCAGATA+TGG | - | chr6_2:4778873-4778892 | None:intergenic | 35.0% | |
| AGATGAAGATGAAGATTGGA+TGG | + | chr6_2:4778935-4778954 | Msa0906200:intron | 35.0% | |
| TGTTATTGTTGTCTATGTCC+TGG | + | chr6_2:4779015-4779034 | Msa0906200:intron | 35.0% | |
| ! | TTAAGCTTTTAACAAGTGCC+AGG | - | chr6_2:4779036-4779055 | None:intergenic | 35.0% |
| ! | AACGTAAAGAGTGGGATTTT+AGG | - | chr6_2:4779234-4779253 | None:intergenic | 35.0% |
| AAGTCAAGAACGTAAAGAGT+GGG | - | chr6_2:4779242-4779261 | None:intergenic | 35.0% | |
| ! | ATTTTACTAGGGATTGGGAA+GGG | - | chr6_2:4779265-4779284 | None:intergenic | 35.0% |
| !! | CTATTTTATTTGGTGGGTCA+AGG | + | chr6_2:4779570-4779589 | Msa0906200:intron | 35.0% |
| AGTTGTTAGTATCACTCAAC+TGG | + | chr6_2:4779633-4779652 | Msa0906200:intron | 35.0% | |
| GTTGTTAGTATCACTCAACT+GGG | + | chr6_2:4779634-4779653 | Msa0906200:intron | 35.0% | |
| CAACAAGGTAGCATACTAAA+GGG | - | chr6_2:4779976-4779995 | None:intergenic | 35.0% | |
| TCAACAAGGTAGCATACTAA+AGG | - | chr6_2:4779977-4779996 | None:intergenic | 35.0% | |
| !!! | GGTTTCCTCTGTCTTTTTTA+TGG | + | chr6_2:4780102-4780121 | Msa0906200:intron | 35.0% |
| TTCTACTCAAGCCAAACTAT+AGG | + | chr6_2:4780437-4780456 | Msa0906200:intron | 35.0% | |
| AGGTACATAGGACAATGAAT+TGG | - | chr6_2:4780585-4780604 | None:intergenic | 35.0% | |
| ! | GCATTCACCTTTTTAACAGT+TGG | + | chr6_2:4780664-4780683 | Msa0906200:intron | 35.0% |
| CCTTATCCCAACTGTTAAAA+AGG | - | chr6_2:4780674-4780693 | None:intergenic | 35.0% | |
| ! | CCTTTTTAACAGTTGGGATA+AGG | + | chr6_2:4780671-4780690 | Msa0906200:intron | 35.0% |
| GTATGGTTGAACAAAAGGAT+GGG | + | chr6_2:4780703-4780722 | Msa0906200:CDS | 35.0% | |
| ! | GACTCTTATATTTTGCTTGG+TGG | + | chr6_2:4781287-4781306 | Msa0906200:intron | 35.0% |
| GTTGGAAAGATGACAATTTC+TGG | + | chr6_2:4781329-4781348 | Msa0906200:CDS | 35.0% | |
| !!! | ACAGTTTTTAGGGTTAGCAG+AGG | - | chr6_2:4776588-4776607 | None:intergenic | 40.0% |
| !!! | AGCTCTGTTGATTCCTTTTC+TGG | + | chr6_2:4776702-4776721 | Msa0906200:intron | 40.0% |
| !! | ACTGATTTGGTTATGGAGCA+TGG | + | chr6_2:4776768-4776787 | Msa0906200:intron | 40.0% |
| !!! | GAGCATGGTGTTTTAGTTGA+TGG | + | chr6_2:4776783-4776802 | Msa0906200:intron | 40.0% |
| TTGCAAGAGAGTAATGAGGA+AGG | + | chr6_2:4776966-4776985 | Msa0906200:intron | 40.0% | |
| TGCAAGAGAGTAATGAGGAA+GGG | + | chr6_2:4776967-4776986 | Msa0906200:intron | 40.0% | |
| AAAGGGAATGAAGTGGATGT+TGG | + | chr6_2:4777014-4777033 | Msa0906200:intron | 40.0% | |
| AAGGGAATGAAGTGGATGTT+GGG | + | chr6_2:4777015-4777034 | Msa0906200:intron | 40.0% | |
| !! | AACCATGTTTTTGACGACGA+AGG | - | chr6_2:4777084-4777103 | None:intergenic | 40.0% |
| ! | GGTTAAGAAGACTTTGAGAG+GGG | + | chr6_2:4777100-4777119 | Msa0906200:intron | 40.0% |
| !! | TGTGAGTTGGTTTCAAGACA+TGG | + | chr6_2:4777206-4777225 | Msa0906200:intron | 40.0% |
| ! | TAAGTTGACAAGGGAAGCTT+TGG | + | chr6_2:4777289-4777308 | Msa0906200:intron | 40.0% |
| ! | GATAAAAGGGTGCACCATAA+TGG | + | chr6_2:4777334-4777353 | Msa0906200:intron | 40.0% |
| TATGTTCCTCTTCTTTGGGT+CGG | - | chr6_2:4777372-4777391 | None:intergenic | 40.0% | |
| CGTTGATGCGTCAAATATGT+TGG | + | chr6_2:4777439-4777458 | Msa0906200:intron | 40.0% | |
| CGAAAAGGACTAGGTTGTAT+TGG | + | chr6_2:4777585-4777604 | Msa0906200:intron | 40.0% | |
| TCAATTGTGTGTGTTGCACA+AGG | - | chr6_2:4777614-4777633 | None:intergenic | 40.0% | |
| GGTTGTATTCATGAGAACGA+AGG | + | chr6_2:4777815-4777834 | Msa0906200:intron | 40.0% | |
| GAGAAGAATGTTCACATCCA+AGG | + | chr6_2:4777844-4777863 | Msa0906200:intron | 40.0% | |
| ! | GAGTAATGGGAAATATGTCG+AGG | + | chr6_2:4777895-4777914 | Msa0906200:intron | 40.0% |
| ! | ATATGTCGAGGATGTGGTTT+TGG | + | chr6_2:4777907-4777926 | Msa0906200:intron | 40.0% |
| ! | AAACAAAGCACTTCAACCAG+AGG | - | chr6_2:4777980-4777999 | None:intergenic | 40.0% |
| ! | TCTGGTTGAAGTGCTTTGTT+TGG | + | chr6_2:4777979-4777998 | Msa0906200:intron | 40.0% |
| AGGTTCCATTTATGAGGCAT+TGG | + | chr6_2:4778027-4778046 | Msa0906200:intron | 40.0% | |
| TTGCTCCAATGCCTCATAAA+TGG | - | chr6_2:4778035-4778054 | None:intergenic | 40.0% | |
| AAGCTAAAGAGGAGATACGA+AGG | + | chr6_2:4778053-4778072 | Msa0906200:intron | 40.0% | |
| ATACGAAGGAGTCTTTCCAA+AGG | + | chr6_2:4778067-4778086 | Msa0906200:intron | 40.0% | |
| !! | TTTCCAAAGGTGTCACAGAA+AGG | + | chr6_2:4778080-4778099 | Msa0906200:intron | 40.0% |
| TTACCTTTCTGTGACACCTT+TGG | - | chr6_2:4778086-4778105 | None:intergenic | 40.0% | |
| AAATAGCCTGCAGTATGCAA+GGG | - | chr6_2:4778270-4778289 | None:intergenic | 40.0% | |
| AAAATAGCCTGCAGTATGCA+AGG | - | chr6_2:4778271-4778290 | None:intergenic | 40.0% | |
| CCCAAATATCACTATAGTCC+TGG | + | chr6_2:4778297-4778316 | Msa0906200:intron | 40.0% | |
| CACTATAGTCCTGGATTTAG+AGG | + | chr6_2:4778306-4778325 | Msa0906200:intron | 40.0% | |
| ! | AATGGATTCCTTCACATTGG+TGG | + | chr6_2:4778478-4778497 | Msa0906200:intron | 40.0% |
| ATGGATTCCTTCACATTGGT+GGG | + | chr6_2:4778479-4778498 | Msa0906200:intron | 40.0% | |
| AGCTTGACATGCAGTTCTTA+TGG | + | chr6_2:4778555-4778574 | Msa0906200:intron | 40.0% | |
| GCTTGACATGCAGTTCTTAT+GGG | + | chr6_2:4778556-4778575 | Msa0906200:intron | 40.0% | |
| CTTGACATGCAGTTCTTATG+GGG | + | chr6_2:4778557-4778576 | Msa0906200:intron | 40.0% | |
| TTGACATGCAGTTCTTATGG+GGG | + | chr6_2:4778558-4778577 | Msa0906200:intron | 40.0% | |
| AATGGTTTCTTCTCTTAGCG+TGG | - | chr6_2:4778694-4778713 | None:intergenic | 40.0% | |
| ! | TACGAGTCTTTTGCCTCAAA+TGG | - | chr6_2:4778712-4778731 | None:intergenic | 40.0% |
| AGGTTTAGATGTGGACAACT+TGG | + | chr6_2:4778830-4778849 | Msa0906200:intron | 40.0% | |
| AGATGTGGACAACTTGGATT+TGG | + | chr6_2:4778836-4778855 | Msa0906200:intron | 40.0% | |
| GATGTGGACAACTTGGATTT+GGG | + | chr6_2:4778837-4778856 | Msa0906200:intron | 40.0% | |
| TTGCGTGATGAATATGCTAC+TGG | + | chr6_2:4778906-4778925 | Msa0906200:intron | 40.0% | |
| GAAGTCAAGAACGTAAAGAG+TGG | - | chr6_2:4779243-4779262 | None:intergenic | 40.0% | |
| ! | GATTTTACTAGGGATTGGGA+AGG | - | chr6_2:4779266-4779285 | None:intergenic | 40.0% |
| ACCATGTTGGGAAATAAGCT+TGG | + | chr6_2:4779683-4779702 | Msa0906200:intron | 40.0% | |
| ACCAAGCTTATTTCCCAACA+TGG | - | chr6_2:4779687-4779706 | None:intergenic | 40.0% | |
| !!! | AGAACTGGCTTTTAAGGCAA+TGG | - | chr6_2:4779753-4779772 | None:intergenic | 40.0% |
| CTTGTATACCCTTGGTCAAA+TGG | + | chr6_2:4779784-4779803 | Msa0906200:intron | 40.0% | |
| CATTCAAAGCAGCAACACAA+AGG | - | chr6_2:4779826-4779845 | None:intergenic | 40.0% | |
| ACCTTGAGCATACTTTACCA+CGG | - | chr6_2:4779886-4779905 | None:intergenic | 40.0% | |
| TCTCATGATTCTGCTAAGTG+AGG | + | chr6_2:4780019-4780038 | Msa0906200:intron | 40.0% | |
| TGAAAGAATTGGAGTGCGAA+AGG | + | chr6_2:4780125-4780144 | Msa0906200:intron | 40.0% | |
| GAAAGAATTGGAGTGCGAAA+GGG | + | chr6_2:4780126-4780145 | Msa0906200:intron | 40.0% | |
| CCACAAGATGATCAATGTTG+TGG | - | chr6_2:4780416-4780435 | None:intergenic | 40.0% | |
| CCACAACATTGATCATCTTG+TGG | + | chr6_2:4780413-4780432 | Msa0906200:intron | 40.0% | |
| CACAGGTATGGTTGAACAAA+AGG | + | chr6_2:4780698-4780717 | Msa0906200:CDS | 40.0% | |
| GGTATGGTTGAACAAAAGGA+TGG | + | chr6_2:4780702-4780721 | Msa0906200:CDS | 40.0% | |
| AAGTTCATGCCAAAACTAGC+TGG | + | chr6_2:4780798-4780817 | Msa0906200:intron | 40.0% | |
| AGTTCATGCCAAAACTAGCT+GGG | + | chr6_2:4780799-4780818 | Msa0906200:intron | 40.0% | |
| TTCAGTTGTGACAGTTGGAA+CGG | + | chr6_2:4781040-4781059 | Msa0906200:intron | 40.0% | |
| ! | AAAGATGACAATTTCTGGGC+TGG | + | chr6_2:4781334-4781353 | Msa0906200:CDS | 40.0% |
| !! | ACAATTTCTGGGCTGGATTT+TGG | + | chr6_2:4781341-4781360 | Msa0906200:CDS | 40.0% |
| GTTTGCCCAAAAAATCATCC+TGG | + | chr6_2:4781507-4781526 | Msa0906200:three_prime_UTR | 40.0% | |
| ATGTGCTCGTCACTTATTGA+AGG | + | chr6_2:4781539-4781558 | Msa0906200:three_prime_UTR | 40.0% | |
| CTGACCCATGTTTGTGAGAA+TGG | - | chr6_2:4775974-4775993 | None:intergenic | 45.0% | |
| CTTCCAAACGGTTCAATCTC+AGG | + | chr6_2:4776161-4776180 | Msa0906200:CDS | 45.0% | |
| TGTCCTGAGATTGAACCGTT+TGG | - | chr6_2:4776167-4776186 | None:intergenic | 45.0% | |
| TGTTATGGTCTTCATGGCAC+TGG | + | chr6_2:4776212-4776231 | Msa0906200:CDS | 45.0% | |
| TGTGATGACTACTTGTCTCG+CGG | + | chr6_2:4776831-4776850 | Msa0906200:intron | 45.0% | |
| ! | GTTGAAGTTTGTGAGGGTGT+TGG | + | chr6_2:4776903-4776922 | Msa0906200:intron | 45.0% |
| GATTTGAAAAGGAGGAGAGC+TGG | + | chr6_2:4777050-4777069 | Msa0906200:intron | 45.0% | |
| AGCCTTCGTCGTCAAAAACA+TGG | + | chr6_2:4777079-4777098 | Msa0906200:intron | 45.0% | |
| !! | GCACCATAATGGTTGATGGA+TGG | + | chr6_2:4777345-4777364 | Msa0906200:intron | 45.0% |
| GGTCCATCCATCAACCATTA+TGG | - | chr6_2:4777351-4777370 | None:intergenic | 45.0% | |
| AGTTGCTGGTGAGATGTTGA+TGG | + | chr6_2:4777562-4777581 | Msa0906200:intron | 45.0% | |
| !! | GTGAGATGTTGATGGCGAAA+AGG | + | chr6_2:4777570-4777589 | Msa0906200:intron | 45.0% |
| !! | TGTTGATGGCGAAAAGGACT+AGG | + | chr6_2:4777576-4777595 | Msa0906200:intron | 45.0% |
| GCCGCATCTTACCTAACTTT+AGG | + | chr6_2:4777794-4777813 | Msa0906200:intron | 45.0% | |
| GAATGTTCACATCCAAGGAG+TGG | + | chr6_2:4777849-4777868 | Msa0906200:intron | 45.0% | |
| AGTTGGCGAAGACGAGTAAT+GGG | + | chr6_2:4777882-4777901 | Msa0906200:intron | 45.0% | |
| TGGGAAATATGTCGAGGATG+TGG | + | chr6_2:4777901-4777920 | Msa0906200:intron | 45.0% | |
| !!! | AGGATGTGGTTTTGGACACA+GGG | + | chr6_2:4777915-4777934 | Msa0906200:intron | 45.0% |
| !!! | TGGTTTTGGACACAGGGTTT+TGG | + | chr6_2:4777921-4777940 | Msa0906200:intron | 45.0% |
| !!! | GGTTTTGGACACAGGGTTTT+GGG | + | chr6_2:4777922-4777941 | Msa0906200:intron | 45.0% |
| TCATAAATGGAACCTGTGGC+TGG | - | chr6_2:4778022-4778041 | None:intergenic | 45.0% | |
| AGCCACAGGTTCCATTTATG+AGG | + | chr6_2:4778021-4778040 | Msa0906200:intron | 45.0% | |
| TGCCTCATAAATGGAACCTG+TGG | - | chr6_2:4778026-4778045 | None:intergenic | 45.0% | |
| AATAGCCTGCAGTATGCAAG+GGG | - | chr6_2:4778269-4778288 | None:intergenic | 45.0% | |
| ! | CTTAGCTCTTTCTTCGGGAT+CGG | - | chr6_2:4778382-4778401 | None:intergenic | 45.0% |
| GATGATTTCGATAAACGGGC+AGG | + | chr6_2:4778417-4778436 | Msa0906200:intron | 45.0% | |
| ! | GATAAACGGGCAGGTTTTCT+GGG | + | chr6_2:4778426-4778445 | Msa0906200:intron | 45.0% |
| CCATTTATCAGCAGCCCTTA+CGG | - | chr6_2:4778463-4778482 | None:intergenic | 45.0% | |
| AAAGAGTCCCACCAATGTGA+AGG | - | chr6_2:4778489-4778508 | None:intergenic | 45.0% | |
| ! | TCACATTGGTGGGACTCTTT+TGG | + | chr6_2:4778489-4778508 | Msa0906200:intron | 45.0% |
| ! | TAATCAGAGTGCCTTCGAGA+TGG | + | chr6_2:4778587-4778606 | Msa0906200:intron | 45.0% |
| ! | GGACAACTTGGATTTGGGTT+TGG | + | chr6_2:4778842-4778861 | Msa0906200:intron | 45.0% |
| AAGTGCAGCAAATTGCCCTT+CGG | + | chr6_2:4779857-4779876 | Msa0906200:intron | 45.0% | |
| ACTTTACCACGGAAACCGAA+GGG | - | chr6_2:4779875-4779894 | None:intergenic | 45.0% | |
| TACTTTACCACGGAAACCGA+AGG | - | chr6_2:4779876-4779895 | None:intergenic | 45.0% | |
| TCCGTGGTAAAGTATGCTCA+AGG | + | chr6_2:4779882-4779901 | Msa0906200:intron | 45.0% | |
| GCTGTGACTATTGTCTCTCA+AGG | + | chr6_2:4779941-4779960 | Msa0906200:intron | 45.0% | |
| TGCGAAAGGGAATGCAGTAA+GGG | + | chr6_2:4780139-4780158 | Msa0906200:CDS | 45.0% | |
| ACCTTTGCACTCTACAACAG+TGG | - | chr6_2:4780303-4780322 | None:intergenic | 45.0% | |
| ! | ACTGCGTTGATCATGCTCAT+GGG | + | chr6_2:4780342-4780361 | Msa0906200:CDS | 45.0% |
| AGTTGGGATAAGGAGATCAC+AGG | + | chr6_2:4780681-4780700 | Msa0906200:intron | 45.0% | |
| GGATAAGGAGATCACAGGTA+TGG | + | chr6_2:4780686-4780705 | Msa0906200:CDS | 45.0% | |
| TTGGCATGAACTTCCTGATG+TGG | - | chr6_2:4780791-4780810 | None:intergenic | 45.0% | |
| TTCGGTTCAGTTGTGACAGT+TGG | + | chr6_2:4781035-4781054 | Msa0906200:intron | 45.0% | |
| ! | CGAGCACATGTTTCTATTCC+AGG | - | chr6_2:4781528-4781547 | None:intergenic | 45.0% |
| GTGATGACTACTTGTCTCGC+GGG | + | chr6_2:4776832-4776851 | Msa0906200:intron | 50.0% | |
| TGATGACTACTTGTCTCGCG+GGG | + | chr6_2:4776833-4776852 | Msa0906200:intron | 50.0% | |
| ! | GCGTTTTTACGTCACTTGGC+TGG | + | chr6_2:4776861-4776880 | Msa0906200:intron | 50.0% |
| TTACGTCACTTGGCTGGAAC+TGG | + | chr6_2:4776867-4776886 | Msa0906200:intron | 50.0% | |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | + | chr6_2:4776911-4776930 | Msa0906200:intron | 50.0% |
| !! | TGTTGGTGATGAGGTGAGAG+AGG | + | chr6_2:4776920-4776939 | Msa0906200:intron | 50.0% |
| TGAGGTGAGAGAGGAAATGC+TGG | + | chr6_2:4776929-4776948 | Msa0906200:intron | 50.0% | |
| GAGGTGAGAGAGGAAATGCT+GGG | + | chr6_2:4776930-4776949 | Msa0906200:intron | 50.0% | |
| AGGTGAGAGAGGAAATGCTG+GGG | + | chr6_2:4776931-4776950 | Msa0906200:intron | 50.0% | |
| CAATGACATACCGCTCGATG+CGG | + | chr6_2:4777157-4777176 | Msa0906200:intron | 50.0% | |
| TCACTCTTTACCGCATCGAG+CGG | - | chr6_2:4777170-4777189 | None:intergenic | 50.0% | |
| GGGTGCACCATAATGGTTGA+TGG | + | chr6_2:4777341-4777360 | Msa0906200:intron | 50.0% | |
| CAAGGGCTTCTCTCATTCCT+CGG | + | chr6_2:4777717-4777736 | Msa0906200:intron | 50.0% | |
| !! | TTAGTGAAGTGCTGCAACCG+AGG | - | chr6_2:4777737-4777756 | None:intergenic | 50.0% |
| CGGTTGCAGCACTTCACTAA+AGG | + | chr6_2:4777737-4777756 | Msa0906200:intron | 50.0% | |
| CATTACTCGTCTTCGCCAAC+TGG | - | chr6_2:4777883-4777902 | None:intergenic | 50.0% | |
| CAGTTGGCGAAGACGAGTAA+TGG | + | chr6_2:4777881-4777900 | Msa0906200:intron | 50.0% | |
| !!! | GAGGATGTGGTTTTGGACAC+AGG | + | chr6_2:4777914-4777933 | Msa0906200:intron | 50.0% |
| ! | GGCATTGGAGCAAGCTAAAG+AGG | + | chr6_2:4778042-4778061 | Msa0906200:intron | 50.0% |
| ! | CGATAAACGGGCAGGTTTTC+TGG | + | chr6_2:4778425-4778444 | Msa0906200:intron | 50.0% |
| CCGTAAGGGCTGCTGATAAA+TGG | + | chr6_2:4778460-4778479 | Msa0906200:intron | 50.0% | |
| AGCACAGATCTGCACCATGT+TGG | + | chr6_2:4779670-4779689 | Msa0906200:intron | 50.0% | |
| GCACAGATCTGCACCATGTT+GGG | + | chr6_2:4779671-4779690 | Msa0906200:intron | 50.0% | |
| AAATTGCCCTTCGGTTTCCG+TGG | + | chr6_2:4779866-4779885 | Msa0906200:intron | 50.0% | |
| GTGCGAAAGGGAATGCAGTA+AGG | + | chr6_2:4780138-4780157 | Msa0906200:CDS | 50.0% | |
| AAGGGAATGCAGTAAGGGTG+AGG | + | chr6_2:4780144-4780163 | Msa0906200:CDS | 50.0% | |
| GCAGTAAGGGTGAGGACTAT+CGG | + | chr6_2:4780152-4780171 | Msa0906200:CDS | 50.0% | |
| GCCACTGTTGTAGAGTGCAA+AGG | + | chr6_2:4780299-4780318 | Msa0906200:CDS | 50.0% | |
| GCAAAGGTCATGATGCTGCT+CGG | + | chr6_2:4780315-4780334 | Msa0906200:CDS | 50.0% | |
| CATGAGCATGATCAACGCAG+TGG | - | chr6_2:4780343-4780362 | None:intergenic | 50.0% | |
| ! | CACTGCGTTGATCATGCTCA+TGG | + | chr6_2:4780341-4780360 | Msa0906200:CDS | 50.0% |
| GTGTGAGACACTGAAAGCTG+AGG | + | chr6_2:4780752-4780771 | Msa0906200:intron | 50.0% | |
| ATGCAGCTGAAGACCACATC+AGG | + | chr6_2:4780775-4780794 | Msa0906200:intron | 50.0% | |
| CATGCCAAAACTAGCTGGGA+TGG | + | chr6_2:4780803-4780822 | Msa0906200:intron | 50.0% | |
| !! | GCATCCATCCCAGCTAGTTT+TGG | - | chr6_2:4780810-4780829 | None:intergenic | 50.0% |
| ! | TTGTTTCTTCCCCTGCATGC+TGG | + | chr6_2:4781202-4781221 | Msa0906200:intron | 50.0% |
| TGTTTCTTCCCCTGCATGCT+GGG | + | chr6_2:4781203-4781222 | Msa0906200:intron | 50.0% | |
| AAAACAGACCCAGCATGCAG+GGG | - | chr6_2:4781214-4781233 | None:intergenic | 50.0% | |
| CAAAACAGACCCAGCATGCA+GGG | - | chr6_2:4781215-4781234 | None:intergenic | 50.0% | |
| ACAAAACAGACCCAGCATGC+AGG | - | chr6_2:4781216-4781235 | None:intergenic | 50.0% | |
| ! | TGCATGCTGGGTCTGTTTTG+TGG | + | chr6_2:4781215-4781234 | Msa0906200:intron | 50.0% |
| ! | GAGGAAGGGTGTGTACGAGT+TGG | + | chr6_2:4776981-4777000 | Msa0906200:intron | 55.0% |
| AAGCTTCTCGAGCGGTTGCA+AGG | + | chr6_2:4777123-4777142 | Msa0906200:intron | 55.0% | |
| GATGGACCGACCCAAAGAAG+AGG | + | chr6_2:4777363-4777382 | Msa0906200:intron | 55.0% | |
| TCAATAGAGGAGCCAGCCAC+AGG | + | chr6_2:4778007-4778026 | Msa0906200:intron | 55.0% | |
| CTGCAGTATGCAAGGGGCTA+TGG | - | chr6_2:4778263-4778282 | None:intergenic | 55.0% | |
| CATAGCCCCTTGCATACTGC+AGG | + | chr6_2:4778261-4778280 | Msa0906200:intron | 55.0% | |
| TGGGTGATCCTGTAGCCGTA+AGG | + | chr6_2:4778445-4778464 | Msa0906200:intron | 55.0% | |
| GGGTGATCCTGTAGCCGTAA+GGG | + | chr6_2:4778446-4778465 | Msa0906200:intron | 55.0% | |
| GAGAGGGGAAGCTTCTCGAG+CGG | + | chr6_2:4777115-4777134 | Msa0906200:intron | 60.0% | |
| CTGGCTGGACTTCCACTCCT+TGG | - | chr6_2:4777864-4777883 | None:intergenic | 60.0% | |
| GGAGTGGAAGTCCAGCCAGT+TGG | + | chr6_2:4777865-4777884 | Msa0906200:intron | 60.0% | |
| ACTCGTCTTCGCCAACTGGC+TGG | - | chr6_2:4777879-4777898 | None:intergenic | 60.0% | |
| TCAGCAGCCCTTACGGCTAC+AGG | - | chr6_2:4778456-4778475 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 4775962 | 4781565 | 4775962 | ID=Msa0906200;Name=Msa0906200 |
| chr6_2 | mRNA | 4775962 | 4781565 | 4775962 | ID=Msa0906200-mRNA-1;Parent=Msa0906200;Name=Msa0906200-mRNA-1;_AED=0.29;_eAED=0.29;_QI=23|0.8|0.83|1|0.8|0.83|6|174|143 |
| chr6_2 | exon | 4775962 | 4775988 | 4775962 | ID=Msa0906200-mRNA-1:exon:1358;Parent=Msa0906200-mRNA-1 |
| chr6_2 | exon | 4776099 | 4776233 | 4776099 | ID=Msa0906200-mRNA-1:exon:1359;Parent=Msa0906200-mRNA-1 |
| chr6_2 | exon | 4780131 | 4780204 | 4780131 | ID=Msa0906200-mRNA-1:exon:1360;Parent=Msa0906200-mRNA-1 |
| chr6_2 | exon | 4780284 | 4780363 | 4780284 | ID=Msa0906200-mRNA-1:exon:1361;Parent=Msa0906200-mRNA-1 |
| chr6_2 | exon | 4780683 | 4780753 | 4780683 | ID=Msa0906200-mRNA-1:exon:1362;Parent=Msa0906200-mRNA-1 |
| chr6_2 | exon | 4781324 | 4781565 | 4781324 | ID=Msa0906200-mRNA-1:exon:1363;Parent=Msa0906200-mRNA-1 |
| chr6_2 | five_prime_UTR | 4775962 | 4775984 | 4775962 | ID=Msa0906200-mRNA-1:five_prime_utr;Parent=Msa0906200-mRNA-1 |
| chr6_2 | CDS | 4775985 | 4775988 | 4775985 | ID=Msa0906200-mRNA-1:cds;Parent=Msa0906200-mRNA-1 |
| chr6_2 | CDS | 4776099 | 4776233 | 4776099 | ID=Msa0906200-mRNA-1:cds;Parent=Msa0906200-mRNA-1 |
| chr6_2 | CDS | 4780131 | 4780204 | 4780131 | ID=Msa0906200-mRNA-1:cds;Parent=Msa0906200-mRNA-1 |
| chr6_2 | CDS | 4780284 | 4780363 | 4780284 | ID=Msa0906200-mRNA-1:cds;Parent=Msa0906200-mRNA-1 |
| chr6_2 | CDS | 4780683 | 4780753 | 4780683 | ID=Msa0906200-mRNA-1:cds;Parent=Msa0906200-mRNA-1 |
| chr6_2 | CDS | 4781324 | 4781391 | 4781324 | ID=Msa0906200-mRNA-1:cds;Parent=Msa0906200-mRNA-1 |
| chr6_2 | three_prime_UTR | 4781392 | 4781565 | 4781392 | ID=Msa0906200-mRNA-1:three_prime_utr;Parent=Msa0906200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
