Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119540 | AES67467.2 | 70.042 | 237 | 35 | 8 | 1 | 230 | 1 | 208 | 2.84e-98 | 297 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119540 | sp|F1MK05|RN170_BOVIN | 28.571 | 196 | 131 | 4 | 76 | 271 | 73 | 259 | 9.94e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119540 | G7IRQ1 | 70.042 | 237 | 35 | 8 | 1 | 230 | 1 | 208 | 1.36e-98 | 297 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1119540 | 0.801597 | 8.352515e-49 | -8.615850e-47 |
| Msa0014710 | Msa1119540 | 0.802008 | 6.877328e-49 | -8.615850e-47 |
| Msa0015390 | Msa1119540 | 0.813238 | 2.831370e-51 | -8.615850e-47 |
| Msa0017510 | Msa1119540 | 0.820274 | 7.478634e-53 | -8.615850e-47 |
| Msa0026910 | Msa1119540 | 0.802593 | 5.213021e-49 | -8.615850e-47 |
| Msa0028640 | Msa1119540 | 0.807552 | 4.780556e-50 | -8.615850e-47 |
| Msa0031340 | Msa1119540 | 0.815528 | 8.827017e-52 | -8.615850e-47 |
| Msa0052680 | Msa1119540 | 0.813077 | 3.072499e-51 | -8.615850e-47 |
| Msa0052730 | Msa1119540 | 0.808184 | 3.508195e-50 | -8.615850e-47 |
| Msa0089360 | Msa1119540 | 0.813624 | 2.329379e-51 | -8.615850e-47 |
| Msa0092990 | Msa1119540 | 0.813343 | 2.685509e-51 | -8.615850e-47 |
| Msa0094920 | Msa1119540 | 0.800427 | 1.448616e-48 | -8.615850e-47 |
| Msa0100000 | Msa1119540 | 0.839520 | 1.508915e-57 | -8.615850e-47 |
| Msa0104800 | Msa1119540 | 0.802502 | 5.443277e-49 | -8.615850e-47 |
| Msa0113970 | Msa1119540 | 0.803017 | 4.260775e-49 | -8.615850e-47 |
| Msa0114060 | Msa1119540 | 0.802343 | 5.868278e-49 | -8.615850e-47 |
| Msa0116770 | Msa1119540 | 0.800423 | 1.451187e-48 | -8.615850e-47 |
| Msa0604510 | Msa1119540 | 0.806613 | 7.554452e-50 | -8.615850e-47 |
| Msa0616160 | Msa1119540 | 0.816932 | 4.285255e-52 | -8.615850e-47 |
| Msa0617640 | Msa1119540 | 0.803939 | 2.744206e-49 | -8.615850e-47 |
| Msa0638070 | Msa1119540 | 0.802530 | 5.371121e-49 | -8.615850e-47 |
| Msa0649490 | Msa1119540 | 0.808568 | 2.905326e-50 | -8.615850e-47 |
| Msa0656530 | Msa1119540 | 0.825992 | 3.464442e-54 | -8.615850e-47 |
| Msa0659400 | Msa1119540 | 0.801858 | 7.384991e-49 | -8.615850e-47 |
| Msa0663240 | Msa1119540 | 0.815830 | 7.560808e-52 | -8.615850e-47 |
| Msa0679710 | Msa1119540 | 0.818012 | 2.447419e-52 | -8.615850e-47 |
| Msa0682330 | Msa1119540 | 0.807637 | 4.586230e-50 | -8.615850e-47 |
| Msa0682840 | Msa1119540 | 0.803475 | 3.424323e-49 | -8.615850e-47 |
| Msa0682900 | Msa1119540 | 0.805433 | 1.338144e-49 | -8.615850e-47 |
| Msa0684500 | Msa1119540 | 0.817494 | 3.202638e-52 | -8.615850e-47 |
| Msa0688480 | Msa1119540 | 0.839714 | 1.343380e-57 | -8.615850e-47 |
| Msa0692230 | Msa1119540 | 0.806606 | 7.580077e-50 | -8.615850e-47 |
| Msa0693380 | Msa1119540 | 0.805149 | 1.534493e-49 | -8.615850e-47 |
| Msa0704600 | Msa1119540 | 0.805224 | 1.480157e-49 | -8.615850e-47 |
| Msa0743720 | Msa1119540 | 0.803787 | 2.950682e-49 | -8.615850e-47 |
| Msa0745790 | Msa1119540 | 0.802002 | 6.897823e-49 | -8.615850e-47 |
| Msa0756540 | Msa1119540 | 0.803097 | 4.100652e-49 | -8.615850e-47 |
| Msa0777230 | Msa1119540 | 0.823039 | 1.716559e-53 | -8.615850e-47 |
| Msa0787470 | Msa1119540 | 0.805056 | 1.604622e-49 | -8.615850e-47 |
| Msa0804230 | Msa1119540 | 0.809365 | 1.961900e-50 | -8.615850e-47 |
| Msa0810220 | Msa1119540 | 0.807071 | 6.044596e-50 | -8.615850e-47 |
| Msa0820850 | Msa1119540 | 0.816211 | 6.216739e-52 | -8.615850e-47 |
| Msa0824660 | Msa1119540 | 0.812427 | 4.263421e-51 | -8.615850e-47 |
| Msa0827040 | Msa1119540 | 0.801551 | 8.535937e-49 | -8.615850e-47 |
| Msa0122590 | Msa1119540 | 0.801275 | 9.724695e-49 | -8.615850e-47 |
| Msa0147250 | Msa1119540 | 0.804686 | 1.917798e-49 | -8.615850e-47 |
| Msa0149000 | Msa1119540 | 0.807681 | 4.489555e-50 | -8.615850e-47 |
| Msa0150800 | Msa1119540 | 0.819683 | 1.021273e-52 | -8.615850e-47 |
| Msa0151180 | Msa1119540 | 0.803825 | 2.897343e-49 | -8.615850e-47 |
| Msa0157290 | Msa1119540 | 0.820306 | 7.354340e-53 | -8.615850e-47 |
| Msa0205230 | Msa1119540 | 0.819341 | 1.221776e-52 | -8.615850e-47 |
| Msa0205850 | Msa1119540 | 0.805068 | 1.595902e-49 | -8.615850e-47 |
| Msa0216240 | Msa1119540 | 0.826585 | 2.502468e-54 | -8.615850e-47 |
| Msa0220580 | Msa1119540 | 0.806219 | 9.146387e-50 | -8.615850e-47 |
| Msa0220740 | Msa1119540 | 0.811543 | 6.642038e-51 | -8.615850e-47 |
| Msa0231880 | Msa1119540 | 0.817569 | 3.080890e-52 | -8.615850e-47 |
| Msa0366240 | Msa1119540 | 0.805226 | 1.478571e-49 | -8.615850e-47 |
| Msa0376590 | Msa1119540 | 0.803837 | 2.880727e-49 | -8.615850e-47 |
| Msa0385580 | Msa1119540 | 0.826976 | 2.018467e-54 | -8.615850e-47 |
| Msa0388950 | Msa1119540 | 0.835621 | 1.508259e-56 | -8.615850e-47 |
| Msa0402290 | Msa1119540 | 0.818438 | 1.960040e-52 | -8.615850e-47 |
| Msa0416300 | Msa1119540 | 0.808619 | 2.832925e-50 | -8.615850e-47 |
| Msa0998690 | Msa1119540 | 0.804932 | 1.703409e-49 | -8.615850e-47 |
| Msa1013400 | Msa1119540 | 0.808779 | 2.618765e-50 | -8.615850e-47 |
| Msa1014420 | Msa1119540 | 0.820099 | 8.202852e-53 | -8.615850e-47 |
| Msa1014540 | Msa1119540 | 0.809510 | 1.826405e-50 | -8.615850e-47 |
| Msa1028970 | Msa1119540 | 0.805998 | 1.018115e-49 | -8.615850e-47 |
| Msa1039880 | Msa1119540 | 0.813499 | 2.482113e-51 | -8.615850e-47 |
| Msa1043390 | Msa1119540 | 0.801408 | 9.133585e-49 | -8.615850e-47 |
| Msa1043450 | Msa1119540 | 0.801149 | 1.031662e-48 | -8.615850e-47 |
| Msa1045200 | Msa1119540 | 0.827231 | 1.753393e-54 | -8.615850e-47 |
| Msa1075650 | Msa1119540 | 0.816773 | 4.653181e-52 | -8.615850e-47 |
| Msa1082500 | Msa1119540 | 0.832939 | 7.098849e-56 | -8.615850e-47 |
| Msa1093530 | Msa1119540 | 0.806498 | 7.991188e-50 | -8.615850e-47 |
| Msa1097840 | Msa1119540 | 0.801221 | 9.972962e-49 | -8.615850e-47 |
| Msa1098400 | Msa1119540 | 0.803001 | 4.292338e-49 | -8.615850e-47 |
| Msa0241190 | Msa1119540 | 0.800205 | 1.607513e-48 | -8.615850e-47 |
| Msa0243710 | Msa1119540 | 0.805695 | 1.178927e-49 | -8.615850e-47 |
| Msa0258760 | Msa1119540 | 0.807412 | 5.119657e-50 | -8.615850e-47 |
| Msa0260210 | Msa1119540 | 0.800290 | 1.544977e-48 | -8.615850e-47 |
| Msa0262510 | Msa1119540 | 0.801054 | 1.078855e-48 | -8.615850e-47 |
| Msa0269450 | Msa1119540 | 0.803257 | 3.799583e-49 | -8.615850e-47 |
| Msa0271530 | Msa1119540 | 0.817664 | 2.933026e-52 | -8.615850e-47 |
| Msa0279790 | Msa1119540 | 0.806609 | 7.571518e-50 | -8.615850e-47 |
| Msa0282250 | Msa1119540 | 0.802386 | 5.750241e-49 | -8.615850e-47 |
| Msa0287650 | Msa1119540 | 0.807782 | 4.272567e-50 | -8.615850e-47 |
| Msa0288100 | Msa1119540 | 0.823121 | 1.642682e-53 | -8.615850e-47 |
| Msa0291500 | Msa1119540 | 0.822118 | 2.810647e-53 | -8.615850e-47 |
| Msa0321310 | Msa1119540 | 0.800266 | 1.562557e-48 | -8.615850e-47 |
| Msa0323080 | Msa1119540 | 0.811758 | 5.964444e-51 | -8.615850e-47 |
| Msa0329350 | Msa1119540 | 0.816224 | 6.175489e-52 | -8.615850e-47 |
| Msa0334040 | Msa1119540 | 0.808727 | 2.686792e-50 | -8.615850e-47 |
| Msa0334360 | Msa1119540 | 0.822241 | 2.631439e-53 | -8.615850e-47 |
| Msa0350990 | Msa1119540 | 0.811783 | 5.891214e-51 | -8.615850e-47 |
| Msa0351030 | Msa1119540 | 0.814728 | 1.329193e-51 | -8.615850e-47 |
| Msa0351810 | Msa1119540 | 0.819434 | 1.163841e-52 | -8.615850e-47 |
| Msa0355220 | Msa1119540 | 0.815204 | 1.041975e-51 | -8.615850e-47 |
| Msa0359030 | Msa1119540 | 0.839852 | 1.236858e-57 | -8.615850e-47 |
| Msa1117170 | Msa1119540 | 0.801075 | 1.068487e-48 | -8.615850e-47 |
| Msa1119500 | Msa1119540 | 0.939237 | 1.781397e-99 | -8.615850e-47 |
| Msa1119540 | Msa1127890 | 0.809787 | 1.591889e-50 | -8.615850e-47 |
| Msa1119540 | Msa1137570 | 0.811311 | 7.461225e-51 | -8.615850e-47 |
| Msa1119540 | Msa1147900 | 0.804944 | 1.693498e-49 | -8.615850e-47 |
| Msa1119540 | Msa1147970 | 0.805340 | 1.399289e-49 | -8.615850e-47 |
| Msa1119540 | Msa1152990 | 0.808774 | 2.625481e-50 | -8.615850e-47 |
| Msa1119540 | Msa1172400 | 0.805829 | 1.105171e-49 | -8.615850e-47 |
| Msa1119540 | Msa1172670 | 0.809000 | 2.348641e-50 | -8.615850e-47 |
| Msa1119540 | Msa1174040 | 0.807010 | 6.229607e-50 | -8.615850e-47 |
| Msa1119540 | Msa1179460 | 0.815708 | 8.050850e-52 | -8.615850e-47 |
| Msa1119540 | Msa1193290 | 0.820813 | 5.626061e-53 | -8.615850e-47 |
| Msa1119540 | Msa1201120 | 0.823150 | 1.617340e-53 | -8.615850e-47 |
| Msa1119540 | Msa1218600 | 0.804998 | 1.650095e-49 | -8.615850e-47 |
| Msa1119540 | Msa1221050 | 0.806532 | 7.860168e-50 | -8.615850e-47 |
| Msa1119540 | Msa1231240 | 0.807820 | 4.192469e-50 | -8.615850e-47 |
| Msa1119540 | Msa1233890 | 0.832281 | 1.034083e-55 | -8.615850e-47 |
| Msa1119540 | Msa1235740 | 0.800796 | 1.218044e-48 | -8.615850e-47 |
| Msa1119540 | Msa1253020 | 0.800285 | 1.548740e-48 | -8.615850e-47 |
| Msa1119540 | Msa1284680 | 0.822535 | 2.248899e-53 | -8.615850e-47 |
| Msa1119540 | Msa1313140 | 0.835792 | 1.365112e-56 | -8.615850e-47 |
| Msa1119540 | Msa1314340 | 0.811971 | 5.359507e-51 | -8.615850e-47 |
| Msa1119540 | Msa1336710 | 0.801203 | 1.006000e-48 | -8.615850e-47 |
| Msa1119540 | Msa1340650 | 0.800932 | 1.142878e-48 | -8.615850e-47 |
| Msa1119540 | Msa1346370 | 0.815172 | 1.059173e-51 | -8.615850e-47 |
| Msa1119540 | Msa1353470 | 0.829162 | 6.007276e-55 | -8.615850e-47 |
| Msa1119540 | Msa1353980 | 0.809966 | 1.456658e-50 | -8.615850e-47 |
| Msa1119540 | Msa1359040 | 0.804365 | 2.236969e-49 | -8.615850e-47 |
| Msa1119540 | Msa1371640 | 0.812056 | 5.137160e-51 | -8.615850e-47 |
| Msa1119540 | Msa1377500 | 0.804229 | 2.388049e-49 | -8.615850e-47 |
| Msa1119540 | Msa1384350 | 0.806224 | 9.126979e-50 | -8.615850e-47 |
| Msa1119540 | Msa1397860 | 0.808261 | 3.378130e-50 | -8.615850e-47 |
| Msa1119540 | Msa1404540 | 0.806560 | 7.753913e-50 | -8.615850e-47 |
| Msa1119540 | Msa1411020 | 0.837360 | 5.443097e-57 | -8.615850e-47 |
| Msa1119540 | Msa1420490 | 0.816108 | 6.552501e-52 | -8.615850e-47 |
| Msa1119540 | Msa1423390 | 0.814405 | 1.566914e-51 | -8.615850e-47 |
| Msa1119540 | Msa1423870 | 0.841964 | 3.451635e-58 | -8.615850e-47 |
| Msa1119540 | Msa1424290 | 0.832026 | 1.195677e-55 | -8.615850e-47 |
| Msa1119540 | Msa1427230 | 0.800898 | 1.161421e-48 | -8.615850e-47 |
| Msa1119540 | Msa1431060 | 0.800061 | 1.719671e-48 | -8.615850e-47 |
| Msa1119540 | Msa1434350 | 0.834452 | 2.973038e-56 | -8.615850e-47 |
| Msa1119540 | Msa1439320 | 0.841165 | 5.606689e-58 | -8.615850e-47 |
| Msa1119540 | Msa1440370 | 0.813187 | 2.905358e-51 | -8.615850e-47 |
| Msa1119540 | Msa1440810 | 0.810554 | 1.088197e-50 | -8.615850e-47 |
| Msa1119540 | Msa1460020 | 0.804702 | 1.902756e-49 | -8.615850e-47 |
| Msa1119540 | Msa1461300 | 0.804786 | 1.827926e-49 | -8.615850e-47 |
| Msa1119540 | Msa1466540 | 0.812221 | 4.728840e-51 | -8.615850e-47 |
| Msa0484780 | Msa1119540 | 0.839229 | 1.794874e-57 | -8.615850e-47 |
| Msa0498650 | Msa1119540 | 0.820413 | 6.950344e-53 | -8.615850e-47 |
| Msa0516370 | Msa1119540 | 0.806277 | 8.896480e-50 | -8.615850e-47 |
| Msa0517110 | Msa1119540 | 0.823280 | 1.507628e-53 | -8.615850e-47 |
| Msa0534590 | Msa1119540 | 0.804413 | 2.185762e-49 | -8.615850e-47 |
| Msa0547320 | Msa1119540 | 0.820599 | 6.299249e-53 | -8.615850e-47 |
| Msa0547360 | Msa1119540 | 0.807040 | 6.138745e-50 | -8.615850e-47 |
| Msa0548620 | Msa1119540 | 0.822809 | 1.941598e-53 | -8.615850e-47 |
| Msa0562440 | Msa1119540 | 0.819775 | 9.726758e-53 | -8.615850e-47 |
| Msa0564590 | Msa1119540 | 0.821114 | 4.794969e-53 | -8.615850e-47 |
| Msa0569220 | Msa1119540 | 0.831553 | 1.564062e-55 | -8.615850e-47 |
| Msa0592440 | Msa1119540 | 0.806044 | 9.955758e-50 | -8.615850e-47 |
| Msa0601290 | Msa1119540 | 0.804226 | 2.390865e-49 | -8.615850e-47 |
| Msa0850960 | Msa1119540 | 0.807176 | 5.743108e-50 | -8.615850e-47 |
| Msa0861130 | Msa1119540 | 0.819235 | 1.292183e-52 | -8.615850e-47 |
| Msa0861870 | Msa1119540 | 0.813501 | 2.478744e-51 | -8.615850e-47 |
| Msa0863930 | Msa1119540 | 0.806887 | 6.613576e-50 | -8.615850e-47 |
| Msa0876200 | Msa1119540 | 0.811662 | 6.257376e-51 | -8.615850e-47 |
| Msa0880140 | Msa1119540 | 0.817119 | 3.889407e-52 | -8.615850e-47 |
| Msa0897080 | Msa1119540 | 0.809346 | 1.980304e-50 | -8.615850e-47 |
| Msa0902760 | Msa1119540 | 0.807559 | 4.765263e-50 | -8.615850e-47 |
| Msa0954130 | Msa1119540 | 0.801096 | 1.058075e-48 | -8.615850e-47 |
| Msa0969520 | Msa1119540 | 0.801897 | 7.248577e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119540 | MtrunA17_Chr2g0326471 | 70.042 | 237 | 35 | 8 | 1 | 230 | 1 | 208 | 2.61e-102 | 297 |
| Msa1119540 | MtrunA17_Chr3g0077701 | 59.694 | 196 | 73 | 3 | 75 | 270 | 1 | 190 | 1.84e-79 | 238 |
| Msa1119540 | MtrunA17_Chr3g0077691 | 48.921 | 139 | 64 | 3 | 83 | 221 | 10 | 141 | 8.11e-44 | 146 |
| Msa1119540 | MtrunA17_Chr2g0326461 | 89.583 | 48 | 5 | 0 | 228 | 275 | 36 | 83 | 4.50e-24 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119540 | AT1G72175.1 | 52.778 | 180 | 79 | 3 | 91 | 270 | 10 | 183 | 4.04e-50 | 163 |
| Msa1119540 | AT1G22510.1 | 53.333 | 180 | 78 | 3 | 91 | 270 | 10 | 183 | 5.73e-44 | 147 |
| Msa1119540 | AT1G72175.2 | 53.947 | 152 | 64 | 3 | 119 | 270 | 4 | 149 | 1.93e-38 | 132 |
| Msa1119540 | AT1G22510.2 | 54.088 | 159 | 67 | 3 | 112 | 270 | 49 | 201 | 4.18e-33 | 120 |
| Msa1119540 | AT4G33940.1 | 28.022 | 182 | 123 | 4 | 81 | 262 | 64 | 237 | 8.37e-22 | 92.0 |
| Msa1119540 | AT4G33940.2 | 27.941 | 136 | 91 | 3 | 81 | 216 | 64 | 192 | 1.95e-14 | 70.9 |
Find 64 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGAAAAGAAAGGGAAAT+TGG | 0.207524 | 7_3:-68498107 | Msa1119540:CDS |
| GGCTAAGATAGAAGAAGAAT+TGG | 0.288794 | 7_3:-68498191 | Msa1119540:CDS |
| GGCAAAGTATTGATCTATAA+AGG | 0.294780 | 7_3:+68497440 | None:intergenic |
| TCATCGACCCGTTACCCTTT+TGG | 0.297940 | 7_3:-68497894 | Msa1119540:CDS |
| GGTTGAAGAGAAAGTGAAAT+TGG | 0.301053 | 7_3:-68498230 | Msa1119540:CDS |
| TGAATTCCAATCAGAACTTC+AGG | 0.330596 | 7_3:+68497815 | None:intergenic |
| GGAAGAAGATTAATGTAATT+AGG | 0.352640 | 7_3:+68497476 | None:intergenic |
| TCTATCTTAGCCTCTAACCC+TGG | 0.356011 | 7_3:+68498202 | None:intergenic |
| GAAGAAAAGGTTGAAAAGAA+AGG | 0.390677 | 7_3:-68498115 | Msa1119540:CDS |
| GTTGAAAAGAAAGGGAAATT+GGG | 0.390750 | 7_3:-68498106 | Msa1119540:CDS |
| CACGACCCTGAAGTTCTGAT+TGG | 0.390853 | 7_3:-68497821 | Msa1119540:CDS |
| TCAAAGAGTCTCTGAGTAAT+GGG | 0.393871 | 7_3:+68497755 | None:intergenic |
| ATTCGGAAAAGTTGGTCTCT+TGG | 0.403931 | 7_3:-68497506 | Msa1119540:CDS |
| AGAGAAAAGGAAAGGGAAAT+CGG | 0.414418 | 7_3:-68498164 | Msa1119540:CDS |
| ATTGGAAAACCCAGGGTTAG+AGG | 0.416917 | 7_3:-68498212 | Msa1119540:CDS |
| GGGTGAAGAGAAAGGGAAAT+CGG | 0.418833 | 7_3:-68498293 | Msa1119540:CDS |
| GTGAAGCTACATGCTCTCAT+TGG | 0.435563 | 7_3:-68497991 | Msa1119540:CDS |
| CTATCTTAGCCTCTAACCCT+GGG | 0.438058 | 7_3:+68498203 | None:intergenic |
| AAAAGCCTCCGCACGAGAAA+AGG | 0.440424 | 7_3:+68497728 | None:intergenic |
| AACTTGTACAATCGCTGATT+GGG | 0.444017 | 7_3:-68497960 | Msa1119540:CDS |
| AAGAAAAGGTTGAAAAGAAA+GGG | 0.445187 | 7_3:-68498114 | Msa1119540:CDS |
| CTACCTCAGCTTCTAACCCT+AGG | 0.452493 | 7_3:+68498080 | None:intergenic |
| GCTAAGATAGAAGAAGAATT+GGG | 0.456108 | 7_3:-68498190 | Msa1119540:CDS |
| ATGTAGCTTCACATATAATC+TGG | 0.464921 | 7_3:+68498002 | None:intergenic |
| CAACTTGTACAATCGCTGAT+TGG | 0.465387 | 7_3:-68497961 | Msa1119540:CDS |
| AAGAATTGGGTGAAGAGAAA+AGG | 0.466239 | 7_3:-68498177 | Msa1119540:CDS |
| CCTTCTGGGATGATGTCAAT+GGG | 0.470014 | 7_3:+68497611 | None:intergenic |
| CAATACTTTGCCTCCGTCAC+GGG | 0.478130 | 7_3:-68497429 | Msa1119540:CDS |
| GCAAAGTATTGATCTATAAA+GGG | 0.479128 | 7_3:+68497441 | None:intergenic |
| GTAGGAACCAAAAGGGTAAC+GGG | 0.484752 | 7_3:+68497887 | None:intergenic |
| ACACGAGCTCTGAAAAGAAA+AGG | 0.485582 | 7_3:+68497674 | None:intergenic |
| GGAGACTGAGAGAGAAGAAA+TGG | 0.487507 | 7_3:-68498251 | Msa1119540:CDS |
| ATCAAAGAGTCTCTGAGTAA+TGG | 0.493238 | 7_3:+68497754 | None:intergenic |
| AAAGGGAAATTGGGAAACCT+AGG | 0.493922 | 7_3:-68498097 | Msa1119540:CDS |
| GCTGAGGTAGAAGAAGAGAA+AGG | 0.494774 | 7_3:-68498067 | Msa1119540:CDS |
| AAGAAAAGGAAGAGATGTAT+CGG | 0.495031 | 7_3:+68497688 | None:intergenic |
| CTGAGGTAGAAGAAGAGAAA+GGG | 0.500548 | 7_3:-68498066 | Msa1119540:CDS |
| ACCTTCTGGGATGATGTCAA+TGG | 0.502368 | 7_3:+68497610 | None:intergenic |
| GCAGGAATATTCGGAAAAGT+TGG | 0.504703 | 7_3:-68497514 | Msa1119540:intron |
| GAGAAAGGGAAATTGAAAGA+AGG | 0.506259 | 7_3:-68498052 | Msa1119540:CDS |
| AGAGGGTGAGATAGAAGAAA+AGG | 0.508654 | 7_3:-68498128 | Msa1119540:CDS |
| AACTACAACTGCGACGATGA+TGG | 0.510417 | 7_3:-68497857 | Msa1119540:CDS |
| CTCTCTCAGTCTCCAACGCT+AGG | 0.520593 | 7_3:+68498260 | None:intergenic |
| TGGGTGAAGAGAAAAGGAAA+GGG | 0.526426 | 7_3:-68498171 | Msa1119540:CDS |
| TCAATACTTTGCCTCCGTCA+CGG | 0.533287 | 7_3:-68497430 | Msa1119540:CDS |
| TTGGGTGAAGAGAAAAGGAA+AGG | 0.536616 | 7_3:-68498172 | Msa1119540:CDS |
| GAATTCCAATCAGAACTTCA+GGG | 0.553145 | 7_3:+68497816 | None:intergenic |
| AACGAAAATTACGCCCGTGA+CGG | 0.561983 | 7_3:+68497416 | None:intergenic |
| AGTAGGAACCAAAAGGGTAA+CGG | 0.564577 | 7_3:+68497886 | None:intergenic |
| TGACAGTGTGGACATTTACA+AGG | 0.564971 | 7_3:+68497914 | None:intergenic |
| AGAAAAGGAAGAGATGTATC+GGG | 0.571993 | 7_3:+68497689 | None:intergenic |
| GGAAAACGAAAACCTAGCGT+TGG | 0.582482 | 7_3:-68498272 | Msa1119540:CDS |
| GAAAATTACGCCCGTGACGG+AGG | 0.584757 | 7_3:+68497419 | None:intergenic |
| TATAAAGGGCAGCAACATGT+AGG | 0.587058 | 7_3:+68497455 | None:intergenic |
| AAACCTAGGGTTAGAAGCTG+AGG | 0.601923 | 7_3:-68498083 | Msa1119540:CDS |
| AAGGGAAATTGGGAAACCTA+GGG | 0.602237 | 7_3:-68498096 | Msa1119540:CDS |
| CCCATTGACATCATCCCAGA+AGG | 0.615355 | 7_3:-68497611 | Msa1119540:intron |
| ATCGGAAGAAATATCGTCAG+AGG | 0.626223 | 7_3:-68498146 | Msa1119540:CDS |
| AAGTGAAATTGGAAAACCCA+GGG | 0.639009 | 7_3:-68498219 | Msa1119540:CDS |
| TCGGAAGAAATATCGTCAGA+GGG | 0.641570 | 7_3:-68498145 | Msa1119540:CDS |
| ACATTTACAAGGTTCAATGT+CGG | 0.657703 | 7_3:+68497925 | None:intergenic |
| AAAGTGAAATTGGAAAACCC+AGG | 0.679877 | 7_3:-68498220 | Msa1119540:CDS |
| CTTCTGGGATGATGTCAATG+GGG | 0.725072 | 7_3:+68497612 | None:intergenic |
| GTAACGGGTCGATGACAGTG+TGG | 0.759412 | 7_3:+68497902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGAAAAGGTTGAAAAGAAA+GGG | - | chr7_3:68497592-68497611 | Msa1119540:intron | 25.0% |
| !! | CAGACTTATAACACTATTTT+TGG | - | chr7_3:68497912-68497931 | Msa1119540:CDS | 25.0% |
| ! | ATGGAAAAATATAACCTTCT+GGG | + | chr7_3:68498112-68498131 | None:intergenic | 25.0% |
| ! | AATGGAAAAATATAACCTTC+TGG | + | chr7_3:68498113-68498132 | None:intergenic | 25.0% |
| ! | GGAAGAAGATTAATGTAATT+AGG | + | chr7_3:68498233-68498252 | None:intergenic | 25.0% |
| !!! | GCAAAGTATTGATCTATAAA+GGG | + | chr7_3:68498268-68498287 | None:intergenic | 25.0% |
| ! | AAGAAAAGGTTGAAAAGAAA+GGG | - | chr7_3:68497592-68497611 | Msa1119540:intron | 25.0% |
| !! | CAGACTTATAACACTATTTT+TGG | - | chr7_3:68497912-68497931 | Msa1119540:CDS | 25.0% |
| ! | ATGGAAAAATATAACCTTCT+GGG | + | chr7_3:68498112-68498131 | None:intergenic | 25.0% |
| ! | AATGGAAAAATATAACCTTC+TGG | + | chr7_3:68498113-68498132 | None:intergenic | 25.0% |
| ! | GGAAGAAGATTAATGTAATT+AGG | + | chr7_3:68498233-68498252 | None:intergenic | 25.0% |
| !!! | GCAAAGTATTGATCTATAAA+GGG | + | chr7_3:68498268-68498287 | None:intergenic | 25.0% |
| GCTAAGATAGAAGAAGAATT+GGG | - | chr7_3:68497516-68497535 | Msa1119540:intron | 30.0% | |
| GAAGAAAAGGTTGAAAAGAA+AGG | - | chr7_3:68497591-68497610 | Msa1119540:intron | 30.0% | |
| GTTGAAAAGAAAGGGAAATT+GGG | - | chr7_3:68497600-68497619 | Msa1119540:intron | 30.0% | |
| ATGTAGCTTCACATATAATC+TGG | + | chr7_3:68497707-68497726 | None:intergenic | 30.0% | |
| ACATTTACAAGGTTCAATGT+CGG | + | chr7_3:68497784-68497803 | None:intergenic | 30.0% | |
| !! | TTTTTCAGTAGGAACCAAAA+GGG | + | chr7_3:68497829-68497848 | None:intergenic | 30.0% |
| !!! | TTTTTTCAGTAGGAACCAAA+AGG | + | chr7_3:68497830-68497849 | None:intergenic | 30.0% |
| !!! | CAGTTGTAGTTTTTTTCAGT+AGG | + | chr7_3:68497840-68497859 | None:intergenic | 30.0% |
| AAGAAAAGGAAGAGATGTAT+CGG | + | chr7_3:68498021-68498040 | None:intergenic | 30.0% | |
| ! | TTTCACAAGTTGGACAAAAA+TGG | + | chr7_3:68498131-68498150 | None:intergenic | 30.0% |
| ! | TCCAACTTGTGAAATTGTTT+TGG | - | chr7_3:68498137-68498156 | Msa1119540:CDS | 30.0% |
| ACCAAAACAATTTCACAAGT+TGG | + | chr7_3:68498141-68498160 | None:intergenic | 30.0% | |
| ! | AATTTTGTTCCTTTTTCTGC+AGG | - | chr7_3:68498174-68498193 | Msa1119540:CDS | 30.0% |
| !! | GGCAAAGTATTGATCTATAA+AGG | + | chr7_3:68498269-68498288 | None:intergenic | 30.0% |
| GCTAAGATAGAAGAAGAATT+GGG | - | chr7_3:68497516-68497535 | Msa1119540:intron | 30.0% | |
| GAAGAAAAGGTTGAAAAGAA+AGG | - | chr7_3:68497591-68497610 | Msa1119540:intron | 30.0% | |
| GTTGAAAAGAAAGGGAAATT+GGG | - | chr7_3:68497600-68497619 | Msa1119540:intron | 30.0% | |
| ATGTAGCTTCACATATAATC+TGG | + | chr7_3:68497707-68497726 | None:intergenic | 30.0% | |
| ACATTTACAAGGTTCAATGT+CGG | + | chr7_3:68497784-68497803 | None:intergenic | 30.0% | |
| !! | TTTTTCAGTAGGAACCAAAA+GGG | + | chr7_3:68497829-68497848 | None:intergenic | 30.0% |
| !!! | TTTTTTCAGTAGGAACCAAA+AGG | + | chr7_3:68497830-68497849 | None:intergenic | 30.0% |
| !!! | CAGTTGTAGTTTTTTTCAGT+AGG | + | chr7_3:68497840-68497859 | None:intergenic | 30.0% |
| AAGAAAAGGAAGAGATGTAT+CGG | + | chr7_3:68498021-68498040 | None:intergenic | 30.0% | |
| ! | TTTCACAAGTTGGACAAAAA+TGG | + | chr7_3:68498131-68498150 | None:intergenic | 30.0% |
| ! | TCCAACTTGTGAAATTGTTT+TGG | - | chr7_3:68498137-68498156 | Msa1119540:CDS | 30.0% |
| ACCAAAACAATTTCACAAGT+TGG | + | chr7_3:68498141-68498160 | None:intergenic | 30.0% | |
| ! | AATTTTGTTCCTTTTTCTGC+AGG | - | chr7_3:68498174-68498193 | Msa1119540:CDS | 30.0% |
| !! | GGCAAAGTATTGATCTATAA+AGG | + | chr7_3:68498269-68498288 | None:intergenic | 30.0% |
| GGTTGAAGAGAAAGTGAAAT+TGG | - | chr7_3:68497476-68497495 | Msa1119540:CDS | 35.0% | |
| AAAGTGAAATTGGAAAACCC+AGG | - | chr7_3:68497486-68497505 | Msa1119540:CDS | 35.0% | |
| AAGTGAAATTGGAAAACCCA+GGG | - | chr7_3:68497487-68497506 | Msa1119540:CDS | 35.0% | |
| GGCTAAGATAGAAGAAGAAT+TGG | - | chr7_3:68497515-68497534 | Msa1119540:intron | 35.0% | |
| AAGAATTGGGTGAAGAGAAA+AGG | - | chr7_3:68497529-68497548 | Msa1119540:intron | 35.0% | |
| AGAGAAAAGGAAAGGGAAAT+CGG | - | chr7_3:68497542-68497561 | Msa1119540:intron | 35.0% | |
| GGTTGAAAAGAAAGGGAAAT+TGG | - | chr7_3:68497599-68497618 | Msa1119540:intron | 35.0% | |
| GAGAAAGGGAAATTGAAAGA+AGG | - | chr7_3:68497654-68497673 | Msa1119540:CDS | 35.0% | |
| ! | AACTTGTACAATCGCTGATT+GGG | - | chr7_3:68497746-68497765 | Msa1119540:CDS | 35.0% |
| GAATTCCAATCAGAACTTCA+GGG | + | chr7_3:68497893-68497912 | None:intergenic | 35.0% | |
| TGAATTCCAATCAGAACTTC+AGG | + | chr7_3:68497894-68497913 | None:intergenic | 35.0% | |
| TCAAAGAGTCTCTGAGTAAT+GGG | + | chr7_3:68497954-68497973 | None:intergenic | 35.0% | |
| ATCAAAGAGTCTCTGAGTAA+TGG | + | chr7_3:68497955-68497974 | None:intergenic | 35.0% | |
| AGAAAAGGAAGAGATGTATC+GGG | + | chr7_3:68498020-68498039 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTGCAGGAATATT+CGG | - | chr7_3:68498183-68498202 | Msa1119540:CDS | 35.0% |
| GGTTGAAGAGAAAGTGAAAT+TGG | - | chr7_3:68497476-68497495 | Msa1119540:CDS | 35.0% | |
| AAAGTGAAATTGGAAAACCC+AGG | - | chr7_3:68497486-68497505 | Msa1119540:CDS | 35.0% | |
| AAGTGAAATTGGAAAACCCA+GGG | - | chr7_3:68497487-68497506 | Msa1119540:CDS | 35.0% | |
| GGCTAAGATAGAAGAAGAAT+TGG | - | chr7_3:68497515-68497534 | Msa1119540:intron | 35.0% | |
| AAGAATTGGGTGAAGAGAAA+AGG | - | chr7_3:68497529-68497548 | Msa1119540:intron | 35.0% | |
| AGAGAAAAGGAAAGGGAAAT+CGG | - | chr7_3:68497542-68497561 | Msa1119540:intron | 35.0% | |
| GGTTGAAAAGAAAGGGAAAT+TGG | - | chr7_3:68497599-68497618 | Msa1119540:intron | 35.0% | |
| GAGAAAGGGAAATTGAAAGA+AGG | - | chr7_3:68497654-68497673 | Msa1119540:CDS | 35.0% | |
| ! | AACTTGTACAATCGCTGATT+GGG | - | chr7_3:68497746-68497765 | Msa1119540:CDS | 35.0% |
| GAATTCCAATCAGAACTTCA+GGG | + | chr7_3:68497893-68497912 | None:intergenic | 35.0% | |
| TGAATTCCAATCAGAACTTC+AGG | + | chr7_3:68497894-68497913 | None:intergenic | 35.0% | |
| TCAAAGAGTCTCTGAGTAAT+GGG | + | chr7_3:68497954-68497973 | None:intergenic | 35.0% | |
| ATCAAAGAGTCTCTGAGTAA+TGG | + | chr7_3:68497955-68497974 | None:intergenic | 35.0% | |
| AGAAAAGGAAGAGATGTATC+GGG | + | chr7_3:68498020-68498039 | None:intergenic | 35.0% | |
| ! | CCTTTTTCTGCAGGAATATT+CGG | - | chr7_3:68498183-68498202 | Msa1119540:CDS | 35.0% |
| TTGGGTGAAGAGAAAAGGAA+AGG | - | chr7_3:68497534-68497553 | Msa1119540:intron | 40.0% | |
| TGGGTGAAGAGAAAAGGAAA+GGG | - | chr7_3:68497535-68497554 | Msa1119540:intron | 40.0% | |
| ATCGGAAGAAATATCGTCAG+AGG | - | chr7_3:68497560-68497579 | Msa1119540:intron | 40.0% | |
| TCGGAAGAAATATCGTCAGA+GGG | - | chr7_3:68497561-68497580 | Msa1119540:intron | 40.0% | |
| AGAGGGTGAGATAGAAGAAA+AGG | - | chr7_3:68497578-68497597 | Msa1119540:intron | 40.0% | |
| AAAGGGAAATTGGGAAACCT+AGG | - | chr7_3:68497609-68497628 | Msa1119540:intron | 40.0% | |
| AAGGGAAATTGGGAAACCTA+GGG | - | chr7_3:68497610-68497629 | Msa1119540:intron | 40.0% | |
| CTGAGGTAGAAGAAGAGAAA+GGG | - | chr7_3:68497640-68497659 | Msa1119540:CDS | 40.0% | |
| CAACTTGTACAATCGCTGAT+TGG | - | chr7_3:68497745-68497764 | Msa1119540:CDS | 40.0% | |
| TGACAGTGTGGACATTTACA+AGG | + | chr7_3:68497795-68497814 | None:intergenic | 40.0% | |
| AGTAGGAACCAAAAGGGTAA+CGG | + | chr7_3:68497823-68497842 | None:intergenic | 40.0% | |
| ! | TTGATCTTCCTTTTCTCGTG+CGG | - | chr7_3:68497970-68497989 | Msa1119540:CDS | 40.0% |
| !! | ACACGAGCTCTGAAAAGAAA+AGG | + | chr7_3:68498035-68498054 | None:intergenic | 40.0% |
| CCGAATATTCCTGCAGAAAA+AGG | + | chr7_3:68498186-68498205 | None:intergenic | 40.0% | |
| GCAGGAATATTCGGAAAAGT+TGG | - | chr7_3:68498192-68498211 | Msa1119540:CDS | 40.0% | |
| ! | ATTCGGAAAAGTTGGTCTCT+TGG | - | chr7_3:68498200-68498219 | Msa1119540:CDS | 40.0% |
| TATAAAGGGCAGCAACATGT+AGG | + | chr7_3:68498254-68498273 | None:intergenic | 40.0% | |
| TTGGGTGAAGAGAAAAGGAA+AGG | - | chr7_3:68497534-68497553 | Msa1119540:intron | 40.0% | |
| TGGGTGAAGAGAAAAGGAAA+GGG | - | chr7_3:68497535-68497554 | Msa1119540:intron | 40.0% | |
| ATCGGAAGAAATATCGTCAG+AGG | - | chr7_3:68497560-68497579 | Msa1119540:intron | 40.0% | |
| TCGGAAGAAATATCGTCAGA+GGG | - | chr7_3:68497561-68497580 | Msa1119540:intron | 40.0% | |
| AGAGGGTGAGATAGAAGAAA+AGG | - | chr7_3:68497578-68497597 | Msa1119540:intron | 40.0% | |
| AAAGGGAAATTGGGAAACCT+AGG | - | chr7_3:68497609-68497628 | Msa1119540:intron | 40.0% | |
| AAGGGAAATTGGGAAACCTA+GGG | - | chr7_3:68497610-68497629 | Msa1119540:intron | 40.0% | |
| CTGAGGTAGAAGAAGAGAAA+GGG | - | chr7_3:68497640-68497659 | Msa1119540:CDS | 40.0% | |
| CAACTTGTACAATCGCTGAT+TGG | - | chr7_3:68497745-68497764 | Msa1119540:CDS | 40.0% | |
| TGACAGTGTGGACATTTACA+AGG | + | chr7_3:68497795-68497814 | None:intergenic | 40.0% | |
| AGTAGGAACCAAAAGGGTAA+CGG | + | chr7_3:68497823-68497842 | None:intergenic | 40.0% | |
| ! | TTGATCTTCCTTTTCTCGTG+CGG | - | chr7_3:68497970-68497989 | Msa1119540:CDS | 40.0% |
| !! | ACACGAGCTCTGAAAAGAAA+AGG | + | chr7_3:68498035-68498054 | None:intergenic | 40.0% |
| CCGAATATTCCTGCAGAAAA+AGG | + | chr7_3:68498186-68498205 | None:intergenic | 40.0% | |
| GCAGGAATATTCGGAAAAGT+TGG | - | chr7_3:68498192-68498211 | Msa1119540:CDS | 40.0% | |
| ! | ATTCGGAAAAGTTGGTCTCT+TGG | - | chr7_3:68498200-68498219 | Msa1119540:CDS | 40.0% |
| TATAAAGGGCAGCAACATGT+AGG | + | chr7_3:68498254-68498273 | None:intergenic | 40.0% | |
| GGGTGAAGAGAAAGGGAAAT+CGG | - | chr7_3:68497413-68497432 | Msa1119540:CDS | 45.0% | |
| GGAAAACGAAAACCTAGCGT+TGG | - | chr7_3:68497434-68497453 | Msa1119540:CDS | 45.0% | |
| GGAGACTGAGAGAGAAGAAA+TGG | - | chr7_3:68497455-68497474 | Msa1119540:CDS | 45.0% | |
| ATTGGAAAACCCAGGGTTAG+AGG | - | chr7_3:68497494-68497513 | Msa1119540:CDS | 45.0% | |
| CTATCTTAGCCTCTAACCCT+GGG | + | chr7_3:68497506-68497525 | None:intergenic | 45.0% | |
| TCTATCTTAGCCTCTAACCC+TGG | + | chr7_3:68497507-68497526 | None:intergenic | 45.0% | |
| AAACCTAGGGTTAGAAGCTG+AGG | - | chr7_3:68497623-68497642 | Msa1119540:CDS | 45.0% | |
| GCTGAGGTAGAAGAAGAGAA+AGG | - | chr7_3:68497639-68497658 | Msa1119540:CDS | 45.0% | |
| GTGAAGCTACATGCTCTCAT+TGG | - | chr7_3:68497715-68497734 | Msa1119540:CDS | 45.0% | |
| GTAGGAACCAAAAGGGTAAC+GGG | + | chr7_3:68497822-68497841 | None:intergenic | 45.0% | |
| AACTACAACTGCGACGATGA+TGG | - | chr7_3:68497849-68497868 | Msa1119540:CDS | 45.0% | |
| !! | CTTCTGGGATGATGTCAATG+GGG | + | chr7_3:68498097-68498116 | None:intergenic | 45.0% |
| !! | CCTTCTGGGATGATGTCAAT+GGG | + | chr7_3:68498098-68498117 | None:intergenic | 45.0% |
| !! | ACCTTCTGGGATGATGTCAA+TGG | + | chr7_3:68498099-68498118 | None:intergenic | 45.0% |
| TCAATACTTTGCCTCCGTCA+CGG | - | chr7_3:68498276-68498295 | Msa1119540:CDS | 45.0% | |
| AACGAAAATTACGCCCGTGA+CGG | + | chr7_3:68498293-68498312 | None:intergenic | 45.0% | |
| GGGTGAAGAGAAAGGGAAAT+CGG | - | chr7_3:68497413-68497432 | Msa1119540:CDS | 45.0% | |
| GGAAAACGAAAACCTAGCGT+TGG | - | chr7_3:68497434-68497453 | Msa1119540:CDS | 45.0% | |
| GGAGACTGAGAGAGAAGAAA+TGG | - | chr7_3:68497455-68497474 | Msa1119540:CDS | 45.0% | |
| ATTGGAAAACCCAGGGTTAG+AGG | - | chr7_3:68497494-68497513 | Msa1119540:CDS | 45.0% | |
| CTATCTTAGCCTCTAACCCT+GGG | + | chr7_3:68497506-68497525 | None:intergenic | 45.0% | |
| TCTATCTTAGCCTCTAACCC+TGG | + | chr7_3:68497507-68497526 | None:intergenic | 45.0% | |
| AAACCTAGGGTTAGAAGCTG+AGG | - | chr7_3:68497623-68497642 | Msa1119540:CDS | 45.0% | |
| GCTGAGGTAGAAGAAGAGAA+AGG | - | chr7_3:68497639-68497658 | Msa1119540:CDS | 45.0% | |
| GTGAAGCTACATGCTCTCAT+TGG | - | chr7_3:68497715-68497734 | Msa1119540:CDS | 45.0% | |
| GTAGGAACCAAAAGGGTAAC+GGG | + | chr7_3:68497822-68497841 | None:intergenic | 45.0% | |
| AACTACAACTGCGACGATGA+TGG | - | chr7_3:68497849-68497868 | Msa1119540:CDS | 45.0% | |
| !! | CTTCTGGGATGATGTCAATG+GGG | + | chr7_3:68498097-68498116 | None:intergenic | 45.0% |
| !! | CCTTCTGGGATGATGTCAAT+GGG | + | chr7_3:68498098-68498117 | None:intergenic | 45.0% |
| !! | ACCTTCTGGGATGATGTCAA+TGG | + | chr7_3:68498099-68498118 | None:intergenic | 45.0% |
| TCAATACTTTGCCTCCGTCA+CGG | - | chr7_3:68498276-68498295 | Msa1119540:CDS | 45.0% | |
| AACGAAAATTACGCCCGTGA+CGG | + | chr7_3:68498293-68498312 | None:intergenic | 45.0% | |
| CTACCTCAGCTTCTAACCCT+AGG | + | chr7_3:68497629-68497648 | None:intergenic | 50.0% | |
| ! | TCATCGACCCGTTACCCTTT+TGG | - | chr7_3:68497812-68497831 | Msa1119540:CDS | 50.0% |
| ! | CACGACCCTGAAGTTCTGAT+TGG | - | chr7_3:68497885-68497904 | Msa1119540:CDS | 50.0% |
| ! | ATCTTCCTTTTCTCGTGCGG+AGG | - | chr7_3:68497973-68497992 | Msa1119540:CDS | 50.0% |
| AAAAGCCTCCGCACGAGAAA+AGG | + | chr7_3:68497981-68498000 | None:intergenic | 50.0% | |
| CCCATTGACATCATCCCAGA+AGG | - | chr7_3:68498095-68498114 | Msa1119540:CDS | 50.0% | |
| CAATACTTTGCCTCCGTCAC+GGG | - | chr7_3:68498277-68498296 | Msa1119540:CDS | 50.0% | |
| CTACCTCAGCTTCTAACCCT+AGG | + | chr7_3:68497629-68497648 | None:intergenic | 50.0% | |
| ! | TCATCGACCCGTTACCCTTT+TGG | - | chr7_3:68497812-68497831 | Msa1119540:CDS | 50.0% |
| ! | CACGACCCTGAAGTTCTGAT+TGG | - | chr7_3:68497885-68497904 | Msa1119540:CDS | 50.0% |
| ! | ATCTTCCTTTTCTCGTGCGG+AGG | - | chr7_3:68497973-68497992 | Msa1119540:CDS | 50.0% |
| AAAAGCCTCCGCACGAGAAA+AGG | + | chr7_3:68497981-68498000 | None:intergenic | 50.0% | |
| CCCATTGACATCATCCCAGA+AGG | - | chr7_3:68498095-68498114 | Msa1119540:CDS | 50.0% | |
| CAATACTTTGCCTCCGTCAC+GGG | - | chr7_3:68498277-68498296 | Msa1119540:CDS | 50.0% | |
| CTCTCTCAGTCTCCAACGCT+AGG | + | chr7_3:68497449-68497468 | None:intergenic | 55.0% | |
| !! | GTAACGGGTCGATGACAGTG+TGG | + | chr7_3:68497807-68497826 | None:intergenic | 55.0% |
| ! | TCTCGTGCGGAGGCTTTTCA+AGG | - | chr7_3:68497983-68498002 | Msa1119540:CDS | 55.0% |
| GAAAATTACGCCCGTGACGG+AGG | + | chr7_3:68498290-68498309 | None:intergenic | 55.0% | |
| CTCTCTCAGTCTCCAACGCT+AGG | + | chr7_3:68497449-68497468 | None:intergenic | 55.0% | |
| !! | GTAACGGGTCGATGACAGTG+TGG | + | chr7_3:68497807-68497826 | None:intergenic | 55.0% |
| ! | TCTCGTGCGGAGGCTTTTCA+AGG | - | chr7_3:68497983-68498002 | Msa1119540:CDS | 55.0% |
| GAAAATTACGCCCGTGACGG+AGG | + | chr7_3:68498290-68498309 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 68497411 | 68498317 | 68497411 | ID=Msa1119540;Name=Msa1119540 |
| chr7_3 | mRNA | 68497411 | 68498317 | 68497411 | ID=Msa1119540-mRNA-1;Parent=Msa1119540;Name=Msa1119540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|275 |
| chr7_3 | exon | 68497612 | 68498317 | 68497612 | ID=Msa1119540-mRNA-1:exon:17199;Parent=Msa1119540-mRNA-1 |
| chr7_3 | exon | 68497411 | 68497532 | 68497411 | ID=Msa1119540-mRNA-1:exon:17198;Parent=Msa1119540-mRNA-1 |
| chr7_3 | CDS | 68497612 | 68498317 | 68497612 | ID=Msa1119540-mRNA-1:cds;Parent=Msa1119540-mRNA-1 |
| chr7_3 | CDS | 68497411 | 68497532 | 68497411 | ID=Msa1119540-mRNA-1:cds;Parent=Msa1119540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
