AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0574420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0574420 MtrunA17_Chr8g0390881 91.389 511 27 2 1 495 1 510 0.0 954
Msa0574420 MtrunA17_Chr6g0484841 60.825 485 168 5 23 489 24 504 0.0 614
Msa0574420 MtrunA17_Chr5g0430081 58.904 511 187 5 1 493 1 506 0.0 612
Msa0574420 MtrunA17_Chr5g0430101 58.135 504 187 5 4 490 6 502 0.0 607
Msa0574420 MtrunA17_Chr5g0430031 58.250 503 188 5 9 494 12 509 0.0 604
Msa0574420 MtrunA17_Chr5g0430131 59.800 500 178 4 9 491 12 505 0.0 603
Msa0574420 MtrunA17_Chr5g0430091 59.920 499 178 5 9 490 12 505 0.0 598
Msa0574420 MtrunA17_Chr6g0484811 56.102 508 203 3 1 490 1 506 0.0 597
Msa0574420 MtrunA17_Chr5g0430111 59.382 421 149 4 9 412 12 427 3.25e-176 501
Msa0574420 MtrunA17_Chr2g0310391 47.327 505 233 7 8 490 1 494 3.22e-163 471
Msa0574420 MtrunA17_Chr8g0382901 48.851 522 226 9 1 492 447 957 2.10e-161 482
Msa0574420 MtrunA17_Chr8g0382901 47.358 511 222 9 8 495 1 487 3.02e-153 461
Msa0574420 MtrunA17_Chr2g0310381 46.535 505 237 7 8 490 1 494 2.00e-158 459
Msa0574420 MtrunA17_Chr5g0430071 57.660 359 133 3 149 490 2 358 3.41e-144 418
Msa0574420 MtrunA17_Chr8g0390871 81.466 232 27 1 280 495 1 232 8.99e-141 404
Msa0574420 MtrunA17_Chr3g0116681 39.044 502 268 10 7 485 13 499 1.83e-124 373
Msa0574420 MtrunA17_Chr5g0405001 38.327 514 275 11 3 490 17 514 3.22e-122 367
Msa0574420 MtrunA17_Chr5g0403331 38.431 510 274 9 10 487 1 502 4.41e-122 366
Msa0574420 MtrunA17_Chr3g0101821 37.228 505 283 8 6 486 4 498 8.68e-120 360
Msa0574420 MtrunA17_Chr3g0101711 37.897 504 277 10 10 487 9 502 3.10e-119 359
Msa0574420 MtrunA17_Chr3g0101581 36.926 501 287 8 8 487 8 500 4.49e-119 358
Msa0574420 MtrunA17_Chr4g0058231 39.010 505 266 11 12 489 9 498 2.88e-118 356
Msa0574420 MtrunA17_Chr3g0101691 37.800 500 280 12 12 486 9 502 1.02e-117 355
Msa0574420 MtrunA17_Chr5g0403321 37.166 487 270 8 29 487 26 504 2.44e-117 354
Msa0574420 MtrunA17_Chr4g0047661 39.335 511 273 10 4 487 15 515 3.20e-117 354
Msa0574420 MtrunA17_Chr6g0472311 39.535 516 265 12 11 487 8 515 3.33e-117 354
Msa0574420 MtrunA17_Chr4g0076161 39.010 505 272 11 8 487 8 501 4.45e-117 353
Msa0574420 MtrunA17_Chr3g0101611 38.174 482 269 6 26 486 27 500 5.82e-117 353
Msa0574420 MtrunA17_Chr4g0035921 36.557 517 277 13 13 491 12 515 6.36e-117 353
Msa0574420 MtrunA17_Chr8g0344181 38.075 478 262 8 38 490 39 507 8.32e-117 353
Msa0574420 MtrunA17_Chr4g0047631 38.386 508 280 10 2 487 14 510 8.93e-117 353
Msa0574420 MtrunA17_Chr3g0101571 36.273 499 291 6 8 487 7 497 1.42e-116 352
Msa0574420 MtrunA17_Chr8g0344151 38.622 479 258 9 38 490 37 505 2.68e-116 352
Msa0574420 MtrunA17_Chr3g0094171 36.634 505 285 8 15 494 18 512 1.17e-115 350
Msa0574420 MtrunA17_Chr3g0101631 36.581 503 278 10 10 486 6 493 2.87e-115 348
Msa0574420 MtrunA17_Chr5g0403351 35.842 505 289 9 10 487 5 501 7.72e-115 348
Msa0574420 MtrunA17_Chr4g0047691 39.020 510 274 9 4 487 15 513 4.50e-114 346
Msa0574420 MtrunA17_Chr4g0047641 38.150 519 274 11 1 487 11 514 7.41e-114 346
Msa0574420 MtrunA17_Chr3g0101601 36.056 502 280 11 12 488 12 497 1.35e-113 344
Msa0574420 MtrunA17_Chr3g0101731 35.630 508 297 9 6 491 4 503 2.25e-113 344
Msa0574420 MtrunA17_Chr8g0372251 38.669 481 259 9 37 490 35 506 2.38e-113 344
Msa0574420 MtrunA17_Chr3g0101701 36.978 503 282 11 12 487 9 503 2.44e-113 344
Msa0574420 MtrunA17_Chr3g0101661 37.725 501 282 12 10 487 9 502 1.38e-112 342
Msa0574420 MtrunA17_Chr3g0101751 35.600 500 288 10 6 483 15 502 1.64e-112 342
Msa0574420 MtrunA17_Chr4g0020041 38.067 507 274 13 8 486 5 499 2.78e-112 341
Msa0574420 MtrunA17_Chr3g0101621 36.832 505 278 10 10 491 6 492 3.83e-112 340
Msa0574420 MtrunA17_Chr1g0162801 37.598 508 280 12 6 490 11 504 1.36e-111 340
Msa0574420 MtrunA17_Chr3g0101651 37.451 510 281 11 5 487 5 503 1.84e-111 339
Msa0574420 MtrunA17_Chr1g0174461 36.719 512 279 14 10 491 10 506 2.24e-111 339
Msa0574420 MtrunA17_Chr4g0058261 40.295 474 250 10 39 486 64 530 6.17e-111 339
Msa0574420 MtrunA17_Chr1g0174481 36.111 504 291 7 9 490 6 500 6.76e-111 338
Msa0574420 MtrunA17_Chr1g0174451 35.547 512 290 13 9 491 7 507 7.32e-111 338
Msa0574420 MtrunA17_Chr1g0167321 36.874 499 276 12 16 487 12 498 7.74e-111 337
Msa0574420 MtrunA17_Chr3g0101831 35.657 502 292 8 8 486 6 499 8.81e-111 337
Msa0574420 MtrunA17_Chr4g0058191 38.337 493 268 11 17 487 8 486 1.28e-110 337
Msa0574420 MtrunA17_Chr3g0101721 36.016 497 288 10 12 486 12 500 2.42e-110 336
Msa0574420 MtrunA17_Chr5g0431641 36.000 500 289 9 11 489 11 500 6.16e-110 335
Msa0574420 MtrunA17_Chr3g0101761 35.857 502 288 9 6 483 4 495 1.10e-109 335
Msa0574420 MtrunA17_Chr4g0058281 37.450 502 280 8 10 486 19 511 1.12e-109 335
Msa0574420 MtrunA17_Chr3g0094231 36.907 485 267 9 31 490 30 500 4.62e-109 333
Msa0574420 MtrunA17_Chr3g0101801 34.394 503 300 7 6 486 11 505 5.00e-109 333
Msa0574420 MtrunA17_Chr1g0162811 35.503 507 295 11 7 490 4 501 5.27e-109 333
Msa0574420 MtrunA17_Chr1g0174441 36.471 510 288 10 10 492 29 529 1.53e-108 333
Msa0574420 MtrunA17_Chr5g0431671 36.117 479 275 8 32 489 33 501 1.71e-108 332
Msa0574420 MtrunA17_Chr8g0344191 36.200 500 280 11 6 478 40 527 2.98e-108 332
Msa0574420 MtrunA17_Chr6g0463791 37.103 504 279 12 8 487 8 497 4.36e-108 330
Msa0574420 MtrunA17_Chr5g0445461 35.259 502 290 10 13 489 9 500 5.38e-108 330
Msa0574420 MtrunA17_Chr7g0258221 35.700 507 292 10 12 491 7 506 9.80e-108 330
Msa0574420 MtrunA17_Chr8g0361471 37.200 500 284 11 10 486 6 498 1.10e-107 329
Msa0574420 MtrunA17_Chr4g0030701 36.437 494 266 8 37 491 35 519 1.64e-107 330
Msa0574420 MtrunA17_Chr6g0466331 37.200 500 284 11 10 486 6 498 2.15e-107 329
Msa0574420 MtrunA17_Chr5g0445441 36.111 504 283 10 13 489 50 541 2.35e-107 330
Msa0574420 MtrunA17_Chr4g0024771 35.130 501 294 9 10 489 10 500 3.82e-107 328
Msa0574420 MtrunA17_Chr6g0465511 37.000 500 285 11 10 486 6 498 8.72e-107 327
Msa0574420 MtrunA17_Chr3g0084921 35.603 514 292 10 9 491 7 512 1.03e-106 327
Msa0574420 MtrunA17_Chr1g0156101 38.115 488 258 12 38 489 33 512 1.58e-106 327
Msa0574420 MtrunA17_Chr3g0101671 36.040 505 291 12 6 486 6 502 5.98e-106 325
Msa0574420 MtrunA17_Chr1g0174471 35.421 511 292 11 9 491 22 522 8.30e-106 325
Msa0574420 MtrunA17_Chr3g0101811 33.784 518 298 9 6 486 4 513 3.96e-105 323
Msa0574420 MtrunA17_Chr4g0058201 38.004 471 263 8 38 487 29 491 5.88e-105 322
Msa0574420 MtrunA17_Chr5g0445451 34.921 504 289 10 13 489 9 500 6.28e-105 322
Msa0574420 MtrunA17_Chr5g0446161 33.661 508 292 12 9 486 5 497 6.55e-105 322
Msa0574420 MtrunA17_Chr4g0061381 37.317 477 255 9 46 490 40 504 7.04e-105 322
Msa0574420 MtrunA17_Chr3g0086691 36.897 477 263 7 44 490 39 507 1.45e-104 322
Msa0574420 MtrunA17_Chr3g0116741 35.271 516 281 12 3 486 19 513 8.58e-104 320
Msa0574420 MtrunA17_Chr3g0086651 38.155 477 257 7 44 490 39 507 7.99e-103 317
Msa0574420 MtrunA17_Chr8g0357431 34.269 499 301 8 8 487 10 500 1.51e-102 316
Msa0574420 MtrunA17_Chr7g0218601 35.569 492 280 10 20 485 15 495 3.13e-102 315
Msa0574420 MtrunA17_Chr8g0357421 34.861 502 293 10 8 487 10 499 3.37e-102 315
Msa0574420 MtrunA17_Chr5g0446151 34.286 490 286 10 19 486 23 498 6.10e-102 315
Msa0574420 MtrunA17_Chr3g0086661 37.945 477 258 7 44 490 39 507 6.70e-102 315
Msa0574420 MtrunA17_Chr8g0362701 34.442 511 298 9 9 492 7 507 1.11e-101 314
Msa0574420 MtrunA17_Chr8g0356001 34.122 507 295 7 1 486 15 503 1.91e-101 313
Msa0574420 MtrunA17_Chr5g0445531 35.593 472 273 9 38 489 39 499 7.58e-101 311
Msa0574420 MtrunA17_Chr5g0445421 34.600 500 273 9 14 489 84 553 9.60e-101 313
Msa0574420 MtrunA17_Chr4g0011871 35.102 490 286 8 10 475 2 483 2.44e-100 310
Msa0574420 MtrunA17_Chr1g0200961 33.267 505 296 9 6 486 7 494 8.11e-100 309
Msa0574420 MtrunA17_Chr4g0030711 35.537 484 269 9 48 494 48 525 1.54e-99 309
Msa0574420 MtrunA17_Chr5g0419691 34.898 490 286 8 10 475 2 482 1.73e-99 308
Msa0574420 MtrunA17_Chr1g0156081 36.680 488 265 11 38 489 57 536 1.89e-99 309
Msa0574420 MtrunA17_Chr6g0463801 35.532 470 269 9 38 486 38 494 5.18e-99 307
Msa0574420 MtrunA17_Chr5g0445381 35.130 501 294 9 10 489 41 531 1.11e-98 307
Msa0574420 MtrunA17_Chr7g0218611 34.583 480 279 8 31 485 27 496 3.64e-98 305
Msa0574420 MtrunA17_Chr8g0362481 36.018 447 249 9 72 491 1 437 5.73e-98 302
Msa0574420 MtrunA17_Chr4g0011881 33.538 489 290 10 21 485 15 492 8.26e-98 304
Msa0574420 MtrunA17_Chr8g0355961 32.937 504 307 6 4 486 10 503 1.03e-97 304
Msa0574420 MtrunA17_Chr2g0280261 34.765 489 281 9 26 491 23 496 2.55e-97 303
Msa0574420 MtrunA17_Chr1g0207841 36.042 480 264 10 48 491 49 521 4.56e-95 298
Msa0574420 MtrunA17_Chr7g0254641 33.402 485 284 7 38 490 38 515 4.66e-95 297
Msa0574420 MtrunA17_Chr1g0205361 30.906 508 305 9 9 486 3 494 6.82e-95 296
Msa0574420 MtrunA17_Chr7g0235551 33.267 505 302 9 12 487 7 505 4.27e-94 295
Msa0574420 MtrunA17_Chr4g0011921 34.420 491 287 9 8 475 4 482 6.81e-94 293
Msa0574420 MtrunA17_Chr4g0057001 34.809 497 286 9 17 490 33 514 1.02e-93 294
Msa0574420 MtrunA17_Chr3g0101741 35.104 433 250 7 72 486 1 420 1.67e-93 290
Msa0574420 MtrunA17_Chr7g0246221 32.649 487 299 6 19 482 16 496 1.73e-92 290
Msa0574420 MtrunA17_Chr5g0406651 34.400 500 286 11 17 487 12 498 5.47e-92 289
Msa0574420 MtrunA17_Chr5g0395321 32.806 506 297 10 6 487 10 496 2.01e-91 288
Msa0574420 MtrunA17_Chr1g0205371 30.237 506 319 7 2 486 3 495 4.51e-91 286
Msa0574420 MtrunA17_Chr4g0011981 33.830 470 268 10 35 475 27 482 5.09e-91 286
Msa0574420 MtrunA17_Chr7g0265611 34.008 494 285 10 23 486 32 514 4.33e-90 284
Msa0574420 MtrunA17_Chr4g0039901 32.143 476 293 5 26 480 24 490 7.64e-90 283
Msa0574420 MtrunA17_Chr1g0160851 29.622 503 320 7 5 486 5 494 9.66e-90 283
Msa0574420 MtrunA17_Chr4g0011901 35.032 471 265 11 23 467 19 474 1.25e-89 283
Msa0574420 MtrunA17_Chr4g0011961 33.401 491 279 13 6 467 2 473 1.33e-89 282
Msa0574420 MtrunA17_Chr1g0164211 30.992 484 298 7 24 486 23 491 2.47e-88 279
Msa0574420 MtrunA17_Chr1g0156061 34.792 480 231 11 33 489 48 468 1.02e-87 277
Msa0574420 MtrunA17_Chr4g0056951 34.949 495 288 8 19 490 26 509 1.11e-86 275
Msa0574420 MtrunA17_Chr7g0258211 32.246 521 300 13 2 486 3 506 1.34e-86 275
Msa0574420 MtrunA17_Chr5g0431501 34.025 482 279 11 38 491 34 504 1.51e-86 275
Msa0574420 MtrunA17_Chr5g0431461 34.025 482 279 11 38 491 34 504 1.51e-86 275
Msa0574420 MtrunA17_Chr5g0395381 32.411 506 274 11 6 487 10 471 1.97e-86 273
Msa0574420 MtrunA17_Chr7g0246131 31.211 487 307 7 19 482 16 497 1.31e-85 272
Msa0574420 MtrunA17_Chr5g0395331 31.717 495 295 9 22 487 23 503 3.76e-85 271
Msa0574420 MtrunA17_Chr7g0224561 31.670 521 305 13 7 490 3 509 4.05e-84 269
Msa0574420 MtrunA17_Chr5g0431511 33.548 465 270 9 38 474 34 487 6.37e-84 268
Msa0574420 MtrunA17_Chr7g0255531 30.368 517 308 12 6 490 1 497 1.90e-83 267
Msa0574420 MtrunA17_Chr2g0314721 31.933 476 284 8 9 457 14 476 3.66e-83 266
Msa0574420 MtrunA17_Chr7g0224551 31.094 521 308 12 7 490 3 509 4.08e-83 266
Msa0574420 MtrunA17_Chr4g0052851 34.747 495 273 13 16 489 17 482 8.13e-83 265
Msa0574420 MtrunA17_Chr2g0304871 33.977 518 290 15 10 490 12 514 1.05e-82 265
Msa0574420 MtrunA17_Chr4g0053621 33.267 505 277 13 9 478 4 483 3.32e-82 263
Msa0574420 MtrunA17_Chr4g0008101 33.207 527 295 14 12 494 14 527 4.18e-82 264
Msa0574420 MtrunA17_Chr5g0401691 31.313 495 293 10 8 479 27 497 4.29e-81 261
Msa0574420 MtrunA17_Chr5g0430171 60.181 221 85 2 9 229 12 229 5.59e-81 251
Msa0574420 MtrunA17_Chr7g0246121 33.532 504 289 10 19 492 16 503 1.42e-80 259
Msa0574420 MtrunA17_Chr6g0451781 32.179 491 284 11 43 494 80 560 3.30e-79 257
Msa0574420 MtrunA17_Chr8g0351801 31.417 487 284 11 47 493 44 520 7.41e-79 255
Msa0574420 MtrunA17_Chr7g0246181 33.000 500 298 9 10 482 6 495 8.76e-79 254
Msa0574420 MtrunA17_Chr8g0339331 31.337 501 297 16 26 490 25 514 9.55e-79 255
Msa0574420 MtrunA17_Chr4g0046321 30.550 491 291 13 37 489 34 512 1.04e-78 255
Msa0574420 MtrunA17_Chr3g0082701 31.309 527 308 13 10 494 14 528 1.66e-78 254
Msa0574420 MtrunA17_Chr4g0046351 30.346 491 292 13 37 489 34 512 2.46e-78 254
Msa0574420 MtrunA17_Chr6g0451691 32.302 517 295 15 11 482 13 519 3.16e-78 254
Msa0574420 MtrunA17_Chr4g0046331 30.502 518 302 16 18 489 9 514 7.13e-78 253
Msa0574420 MtrunA17_Chr6g0451751 31.731 520 304 13 4 482 6 515 9.37e-78 253
Msa0574420 MtrunA17_Chr8g0339311 33.402 485 278 12 33 482 40 514 1.78e-77 252
Msa0574420 MtrunA17_Chr5g0401681 31.898 511 293 14 11 489 3 490 2.21e-77 251
Msa0574420 MtrunA17_Chr7g0246151 31.659 458 283 8 48 482 45 495 2.67e-77 251
Msa0574420 MtrunA17_Chr4g0052861 29.883 512 301 11 9 489 6 490 3.00e-77 250
Msa0574420 MtrunA17_Chr6g0451741 32.122 523 303 14 14 494 37 549 4.14e-77 251
Msa0574420 MtrunA17_Chr2g0314731 30.689 479 288 8 4 457 6 465 3.16e-76 247
Msa0574420 MtrunA17_Chr1g0213671 30.849 483 289 12 38 487 35 505 4.41e-76 248
Msa0574420 MtrunA17_Chr1g0176831 31.290 473 289 8 6 457 38 495 1.13e-75 247
Msa0574420 MtrunA17_Chr6g0458561 29.868 529 314 17 3 490 15 527 1.46e-75 247
Msa0574420 MtrunA17_Chr1g0197891 30.707 495 296 11 14 479 8 484 3.20e-75 245
Msa0574420 MtrunA17_Chr6g0451641 32.809 509 288 16 12 482 16 508 3.57e-75 246
Msa0574420 MtrunA17_Chr1g0197851 29.980 497 307 11 9 479 3 484 1.00e-74 243
Msa0574420 MtrunA17_Chr1g0197881 29.839 496 308 11 9 479 3 483 1.44e-74 243
Msa0574420 MtrunA17_Chr1g0197871 31.753 485 289 11 11 468 5 474 4.63e-74 241
Msa0574420 MtrunA17_Chr4g0017411 32.842 475 270 14 16 470 14 459 2.45e-73 240
Msa0574420 MtrunA17_Chr2g0296651 31.600 500 285 12 1 471 1 472 2.81e-73 240
Msa0574420 MtrunA17_Chr4g0052881 31.412 503 279 12 6 478 14 480 1.05e-72 238
Msa0574420 MtrunA17_Chr4g0046631 32.596 497 279 14 36 494 44 522 8.75e-72 237
Msa0574420 MtrunA17_Chr6g0466941 31.928 498 285 16 15 469 10 496 1.53e-70 233
Msa0574420 MtrunA17_Chr2g0310351 51.741 201 79 2 306 489 1 200 4.89e-69 219
Msa0574420 MtrunA17_Chr6g0466901 31.452 496 289 15 15 469 10 495 7.27e-69 229
Msa0574420 MtrunA17_Chr2g0296661 33.043 460 257 11 49 477 44 483 2.46e-68 227
Msa0574420 MtrunA17_Chr8g0346261 31.612 484 260 18 39 482 86 538 3.33e-67 225
Msa0574420 MtrunA17_Chr4g0039391 31.277 470 279 12 44 485 42 495 3.88e-67 224
Msa0574420 MtrunA17_Chr6g0451681 30.123 488 253 14 9 470 31 456 2.88e-65 218
Msa0574420 MtrunA17_Chr5g0419451 31.458 480 278 15 39 489 62 519 3.46e-63 214
Msa0574420 MtrunA17_Chr5g0430151 52.273 176 67 1 332 490 1 176 7.10e-63 202
Msa0574420 MtrunA17_Chr5g0431591 34.426 305 175 6 203 489 21 318 1.18e-62 207
Msa0574420 MtrunA17_Chr1g0200951 32.577 485 274 16 40 490 64 529 6.45e-62 211
Msa0574420 MtrunA17_Chr8g0377341 31.613 465 270 16 40 476 70 514 3.54e-59 203
Msa0574420 MtrunA17_Chr8g0370641 28.378 518 321 15 12 491 15 520 9.57e-58 199
Msa0574420 MtrunA17_Chr5g0430041 52.532 158 58 1 332 472 1 158 5.60e-56 184
Msa0574420 MtrunA17_Chr8g0370651 27.831 521 324 16 12 491 15 524 7.98e-55 192
Msa0574420 MtrunA17_Chr3g0107541 28.070 456 276 10 46 462 59 501 3.91e-53 187
Msa0574420 MtrunA17_Chr1g0160861 28.402 338 211 6 170 486 8 335 1.75e-52 181
Msa0574420 MtrunA17_Chr1g0210091 27.966 472 287 16 46 481 74 528 2.82e-51 182
Msa0574420 MtrunA17_Chr3g0107611 26.667 495 310 12 9 460 20 504 5.28e-51 182
Msa0574420 MtrunA17_Chr5g0432751 27.664 488 296 16 38 486 34 503 2.88e-50 179
Msa0574420 MtrunA17_Chr6g0463611 32.667 300 186 6 7 302 20 307 1.83e-49 172
Msa0574420 MtrunA17_Chr1g0174421 35.507 276 166 4 38 307 48 317 2.86e-49 172
Msa0574420 MtrunA17_Chr4g0028321 53.731 134 60 2 359 491 27 159 3.74e-49 166
Msa0574420 MtrunA17_Chr4g0058211 43.000 200 94 4 305 487 18 214 4.04e-49 168
Msa0574420 MtrunA17_Chr4g0011861 33.582 268 169 4 28 288 20 285 4.22e-49 171
Msa0574420 MtrunA17_Chr3g0101591 36.864 236 124 4 270 487 8 236 5.20e-48 166
Msa0574420 MtrunA17_Chr6g0484771 56.835 139 59 1 72 210 1 138 4.83e-47 160
Msa0574420 MtrunA17_Chr5g0446101 33.088 272 155 4 231 486 50 310 1.36e-46 164
Msa0574420 MtrunA17_Chr4g0011941 39.196 199 103 4 306 487 1 198 5.00e-46 159
Msa0574420 MtrunA17_Chr4g0030741 33.645 321 195 8 16 329 40 349 1.42e-45 162
Msa0574420 MtrunA17_Chr5g0445751 32.692 312 187 10 1 306 13 307 1.63e-45 161
Msa0574420 MtrunA17_Chr1g0198191 28.008 482 295 18 10 455 18 483 1.81e-45 166
Msa0574420 MtrunA17_Chr1g0174431 37.981 208 104 4 306 490 1 206 2.67e-45 157
Msa0574420 MtrunA17_Chr4g0011851 37.245 196 105 2 297 475 7 201 2.79e-45 157
Msa0574420 MtrunA17_Chr6g0463621 41.089 202 98 6 306 487 1 201 1.66e-44 155
Msa0574420 MtrunA17_Chr5g0445371 37.339 233 119 6 262 490 22 231 5.86e-44 155
Msa0574420 MtrunA17_Chr2g0310371 52.027 148 69 1 8 155 1 146 2.09e-43 150
Msa0574420 MtrunA17_Chr5g0445361 54.331 127 57 1 360 486 9 134 1.09e-42 148
Msa0574420 MtrunA17_Chr2g0280071 26.559 497 314 16 8 471 40 518 2.90e-42 160
Msa0574420 MtrunA17_Chr2g0280121 27.928 444 274 16 61 471 61 491 1.42e-41 155
Msa0574420 MtrunA17_Chr2g0280081 28.027 446 269 16 61 471 558 986 2.74e-41 158
Msa0574420 MtrunA17_Chr2g0280081 26.974 456 294 13 61 488 57 501 2.27e-40 155
Msa0574420 MtrunA17_Chr5g0402971 29.310 290 189 4 31 304 31 320 4.28e-41 149
Msa0574420 MtrunA17_Chr6g0451811 38.679 212 107 5 302 494 1 208 1.81e-40 145
Msa0574420 MtrunA17_Chr8g0364651 25.591 465 300 15 38 471 31 480 2.15e-39 149
Msa0574420 MtrunA17_Chr5g0445761 39.888 178 89 2 306 466 1 177 2.50e-39 141
Msa0574420 MtrunA17_Chr4g0074581 25.047 531 336 16 1 485 24 538 1.03e-38 148
Msa0574420 MtrunA17_Chr2g0280041 26.757 441 281 14 61 471 89 517 4.82e-38 146
Msa0574420 MtrunA17_Chr5g0413911 25.203 492 316 15 38 484 43 527 2.77e-37 144
Msa0574420 MtrunA17_Chr4g0011931 31.071 280 181 5 6 279 2 275 2.97e-37 139
Msa0574420 MtrunA17_Chr6g0451771 39.286 196 96 5 306 482 22 213 4.66e-37 136
Msa0574420 MtrunA17_Chr5g0445351 51.220 123 59 1 360 482 95 216 5.03e-37 135
Msa0574420 MtrunA17_Chr4g0046691 30.337 267 165 7 38 293 40 296 2.74e-36 136
Msa0574420 MtrunA17_Chr5g0430051 58.929 112 43 2 4 115 8 116 1.19e-35 128
Msa0574420 MtrunA17_Chr5g0409051 23.651 482 317 15 34 476 26 495 8.95e-35 136
Msa0574420 MtrunA17_Chr5g0423621 35.165 182 98 4 322 486 1 179 2.12e-34 127
Msa0574420 MtrunA17_Chr8g0387101 25.113 442 296 9 61 474 59 493 7.71e-34 134
Msa0574420 MtrunA17_Chr1g0207851 31.225 253 154 5 43 279 44 292 3.01e-33 129
Msa0574420 MtrunA17_Chr5g0445411 41.860 129 73 1 38 164 46 174 1.35e-32 122
Msa0574420 MtrunA17_Chr5g0431631 42.143 140 77 2 9 146 24 161 2.68e-32 121
Msa0574420 MtrunA17_Chr4g0046681 35.096 208 112 4 306 494 31 234 3.41e-32 123
Msa0574420 MtrunA17_Chr3g0101541 46.491 114 60 1 360 473 24 136 3.42e-31 117
Msa0574420 MtrunA17_Chr8g0364631 26.105 475 291 16 38 471 33 488 3.49e-30 123
Msa0574420 MtrunA17_Chr3g0117321 43.103 116 66 0 39 154 9 124 2.33e-29 112
Msa0574420 MtrunA17_Chr4g0046671 29.329 283 175 9 38 304 44 317 3.16e-29 117
Msa0574420 MtrunA17_Chr6g0451801 27.974 311 197 8 11 297 13 320 3.67e-29 117
Msa0574420 MtrunA17_Chr2g0314781 33.333 153 84 3 322 457 1 152 1.09e-28 111
Msa0574420 MtrunA17_Chr4g0076171 39.655 174 90 6 322 487 1 167 2.47e-28 110
Msa0574420 MtrunA17_Chr5g0402981 34.184 196 105 5 318 493 4 195 4.98e-27 107
Msa0574420 MtrunA17_Chr3g0107561 28.428 299 193 7 4 286 14 307 9.22e-27 110
Msa0574420 MtrunA17_Chr3g0117301 45.918 98 52 1 360 457 21 117 1.46e-26 103
Msa0574420 MtrunA17_Chr3g0107551 32.749 171 94 3 305 455 4 173 6.80e-26 105
Msa0574420 MtrunA17_Chr1g0151221 23.830 470 286 13 36 449 38 491 2.25e-25 109
Msa0574420 MtrunA17_Chr3g0116731 42.188 128 58 3 360 487 21 132 2.34e-25 101
Msa0574420 MtrunA17_Chr6g0477081 30.400 250 129 7 171 396 10 238 2.61e-25 104
Msa0574420 MtrunA17_Chr4g0046661 36.723 177 92 4 297 454 16 191 2.78e-25 103
Msa0574420 MtrunA17_Chr3g0086681 38.806 134 77 2 361 490 37 169 1.53e-24 100
Msa0574420 MtrunA17_Chr4g0046701 40.152 132 73 3 361 490 31 158 5.91e-24 98.2
Msa0574420 MtrunA17_Chr2g0334021 23.542 480 312 14 37 483 35 492 6.42e-24 104
Msa0574420 MtrunA17_Chr3g0135841 24.699 498 289 19 36 467 41 518 7.06e-24 104
Msa0574420 MtrunA17_Chr1g0204271 26.247 461 273 20 42 457 40 478 1.54e-23 103
Msa0574420 MtrunA17_Chr5g0444981 31.977 172 98 4 318 472 23 192 3.73e-23 97.8
Msa0574420 MtrunA17_Chr3g0105761 30.114 176 100 4 307 462 1 173 6.06e-23 96.7
Msa0574420 MtrunA17_Chr3g0105751 26.349 315 201 8 7 301 15 318 2.05e-22 99.0
Msa0574420 MtrunA17_Chr2g0280011 31.053 190 103 6 305 470 7 192 3.46e-22 94.7
Msa0574420 MtrunA17_Chr8g0351401 25.185 405 250 12 121 486 119 509 7.40e-22 98.6
Msa0574420 MtrunA17_Chr2g0280061 31.053 190 103 6 305 470 7 192 2.70e-21 92.0
Msa0574420 MtrunA17_Chr2g0310361 33.793 145 85 3 164 304 1 138 4.94e-21 89.4
Msa0574420 MtrunA17_Chr0c19g0493771 22.811 434 286 11 61 463 211 626 7.38e-21 96.3
Msa0574420 MtrunA17_Chr8g0351391 22.667 375 236 11 121 457 125 483 4.89e-20 93.2
Msa0574420 MtrunA17_Chr5g0431601 48.193 83 42 1 72 154 1 82 5.56e-20 84.3
Msa0574420 MtrunA17_Chr4g0076181 52.632 76 36 0 72 147 1 76 7.74e-20 86.7
Msa0574420 MtrunA17_Chr4g0030761 33.333 147 71 4 359 495 19 148 1.05e-19 85.9
Msa0574420 MtrunA17_Chr1g0203141 25.081 307 196 8 174 460 199 491 2.52e-19 90.9
Msa0574420 MtrunA17_Chr1g0176851 25.316 237 157 4 129 357 7 231 2.88e-19 87.0
Msa0574420 MtrunA17_Chr6g0484761 64.815 54 19 0 437 490 1 54 3.36e-19 81.3
Msa0574420 MtrunA17_Chr5g0445341 42.353 85 48 1 72 155 1 85 4.04e-19 82.0
Msa0574420 MtrunA17_Chr6g0451761 25.177 282 176 8 14 283 17 275 5.23e-19 87.0
Msa0574420 MtrunA17_Chr1g0203151 22.917 432 276 16 56 457 80 484 5.72e-19 89.7
Msa0574420 MtrunA17_Chr8g0381541 23.673 452 283 18 31 453 37 455 5.84e-19 89.7
Msa0574420 MtrunA17_Chr8g0381571 23.673 452 283 18 31 453 37 455 5.98e-19 89.4
Msa0574420 MtrunA17_Chr2g0314771 30.189 159 107 1 72 226 1 159 6.03e-19 84.0
Msa0574420 MtrunA17_Chr7g0215181 23.239 426 278 16 56 457 82 482 8.02e-19 89.4
Msa0574420 MtrunA17_Chr5g0445541 39.623 106 59 2 4 107 8 110 1.27e-18 82.4
Msa0574420 MtrunA17_Chr3g0116721 29.798 198 119 7 145 332 3 190 1.80e-18 83.6
Msa0574420 MtrunA17_Chr1g0193811 22.788 452 296 13 56 476 82 511 2.00e-18 88.2
Msa0574420 MtrunA17_Chr6g0472221 22.434 419 290 11 63 460 98 502 2.09e-18 88.2
Msa0574420 MtrunA17_Chr6g0479681 22.646 446 276 15 56 457 82 502 3.02e-18 87.4
Msa0574420 MtrunA17_Chr8g0351441 23.301 412 249 14 121 486 118 508 8.75e-18 86.3
Msa0574420 MtrunA17_Chr8g0351421 23.156 488 317 17 41 486 38 509 1.09e-17 85.9
Msa0574420 MtrunA17_Chr8g0351461 21.728 405 264 13 121 486 118 508 4.83e-17 84.0
Msa0574420 MtrunA17_Chr8g0372331 34.615 130 78 4 367 493 2 127 6.67e-17 77.4
Msa0574420 MtrunA17_Chr8g0351311 22.034 472 282 16 37 457 48 484 7.81e-17 83.2
Msa0574420 MtrunA17_Chr4g0004481 26.556 241 141 7 233 450 231 458 1.01e-16 82.8
Msa0574420 MtrunA17_Chr2g0280051 25.000 284 192 10 8 279 50 324 1.18e-16 80.9
Msa0574420 MtrunA17_Chr4g0044851 20.993 443 291 10 38 457 38 444 1.38e-16 82.0
Msa0574420 MtrunA17_Chr4g0063221 23.139 497 325 15 9 460 11 495 2.03e-16 82.0
Msa0574420 MtrunA17_Chr6g0472171 35.345 116 68 2 352 464 23 134 4.52e-16 75.9
Msa0574420 MtrunA17_Chr1g0164321 24.096 249 154 5 233 450 269 513 6.58e-16 80.5
Msa0574420 MtrunA17_Chr5g0443401 23.701 481 296 20 14 457 5 451 8.00e-16 79.7
Msa0574420 MtrunA17_Chr4g0038271 23.755 261 164 6 225 457 280 533 1.14e-15 79.7
Msa0574420 MtrunA17_Chr7g0225531 24.658 511 305 20 2 463 11 490 1.17e-15 79.3
Msa0574420 MtrunA17_Chr1g0183611 26.295 251 148 9 231 453 153 394 1.70e-15 78.6
Msa0574420 MtrunA17_Chr8g0372591 31.250 144 77 4 304 426 1 143 2.07e-15 73.6
Msa0574420 MtrunA17_Chr2g0280001 29.070 172 111 4 8 175 40 204 5.07e-15 74.3
Msa0574420 MtrunA17_Chr4g0026941 23.666 431 263 14 67 453 99 507 5.48e-15 77.4
Msa0574420 MtrunA17_Chr1g0182861 34.483 116 69 2 352 464 28 139 7.72e-15 72.4
Msa0574420 MtrunA17_Chr6g0455461 21.415 509 304 19 6 468 1 459 8.29e-15 76.6
Msa0574420 MtrunA17_Chr2g0293421 22.098 448 278 18 38 453 46 454 9.03e-15 76.6
Msa0574420 MtrunA17_Chr1g0184421 23.620 453 285 19 41 453 40 471 9.23e-15 76.6
Msa0574420 MtrunA17_Chr2g0288661 22.759 435 284 18 61 464 87 500 1.28e-14 76.3
Msa0574420 MtrunA17_Chr3g0119681 23.567 471 278 15 41 453 40 486 2.05e-14 75.5
Msa0574420 MtrunA17_Chr2g0313771 23.953 430 274 19 82 483 115 519 2.34e-14 75.5
Msa0574420 MtrunA17_Chr5g0429651 22.560 461 291 13 40 450 30 474 2.47e-14 75.5
Msa0574420 MtrunA17_Chr4g0044841 21.315 441 292 12 38 457 39 445 2.74e-14 75.1
Msa0574420 MtrunA17_Chr7g0235261 21.765 510 307 16 16 460 4 486 4.36e-14 74.7
Msa0574420 MtrunA17_Chr2g0313801 23.223 422 289 17 61 460 84 492 5.12e-14 74.3
Msa0574420 MtrunA17_Chr2g0328711 50.000 56 28 0 432 487 2 57 7.79e-14 66.2
Msa0574420 MtrunA17_Chr2g0313791 23.323 313 201 10 174 460 188 487 1.70e-13 72.8
Msa0574420 MtrunA17_Chr8g0354531 22.328 421 274 14 67 457 221 618 1.95e-13 72.8
Msa0574420 MtrunA17_Chr5g0396521 21.935 465 285 17 67 468 102 551 2.15e-13 72.4
Msa0574420 MtrunA17_Chr1g0184461 22.938 497 306 21 6 453 3 471 2.27e-13 72.4
Msa0574420 MtrunA17_Chr8g0380501 26.016 246 137 10 233 450 229 457 3.09e-13 72.0
Msa0574420 MtrunA17_Chr3g0141801 23.909 481 309 17 7 460 10 460 3.53e-13 71.6
Msa0574420 MtrunA17_Chr1g0153371 21.142 473 306 15 11 453 4 439 3.81e-13 71.6
Msa0574420 MtrunA17_Chr7g0219961 24.324 259 150 8 236 466 216 456 5.20e-13 70.9
Msa0574420 MtrunA17_Chr2g0313811 22.633 433 278 15 67 460 90 504 7.88e-13 70.9
Msa0574420 MtrunA17_Chr8g0354511 22.143 420 277 15 67 457 99 497 9.37e-13 70.5
Msa0574420 MtrunA17_Chr7g0260831 20.485 454 297 16 41 453 39 469 9.39e-13 70.5
Msa0574420 MtrunA17_Chr8g0383801 53.571 56 23 2 391 444 3 57 1.02e-12 64.3
Msa0574420 MtrunA17_Chr1g0164371 20.851 470 311 14 12 457 18 450 1.31e-12 69.7
Msa0574420 MtrunA17_Chr6g0449381 22.245 481 286 19 44 463 31 484 1.96e-12 69.3
Msa0574420 MtrunA17_Chr1g0176861 43.820 89 44 2 6 94 12 94 3.38e-12 62.8
Msa0574420 MtrunA17_Chr8g0339861 22.989 435 262 18 38 438 46 441 5.54e-12 67.8
Msa0574420 MtrunA17_Chr5g0400411 22.000 450 277 15 38 453 46 455 5.75e-12 67.8
Msa0574420 MtrunA17_Chr1g0163421 25.306 245 153 9 233 453 271 509 5.77e-12 68.2
Msa0574420 MtrunA17_Chr6g0449361 22.284 359 206 15 142 450 134 469 5.99e-12 67.8
Msa0574420 MtrunA17_Chr7g0248991 21.875 320 205 9 118 408 48 351 6.42e-12 67.0
Msa0574420 MtrunA17_Chr6g0458571 34.821 112 65 5 3 106 15 126 6.46e-12 63.2
Msa0574420 MtrunA17_Chr5g0445551 46.552 58 31 0 432 489 2 59 9.46e-12 60.5
Msa0574420 MtrunA17_Chr1g0163401 26.210 248 153 8 233 453 237 481 1.57e-11 66.6
Msa0574420 MtrunA17_Chr5g0446131 22.476 307 205 11 174 457 191 487 2.15e-11 66.2
Msa0574420 MtrunA17_Chr2g0307301 21.461 438 278 18 58 460 88 494 2.19e-11 66.2
Msa0574420 MtrunA17_Chr2g0313781 23.037 382 243 14 117 460 136 504 2.26e-11 66.2
Msa0574420 MtrunA17_Chr1g0163281 25.306 245 143 9 233 450 254 485 3.71e-11 65.5
Msa0574420 MtrunA17_Chr1g0204241 25.430 291 167 13 188 457 8 269 4.34e-11 63.9
Msa0574420 MtrunA17_Chr1g0179811 24.286 420 255 19 67 446 107 503 4.69e-11 65.1
Msa0574420 MtrunA17_Chr2g0307291 20.979 429 291 17 58 460 88 494 6.67e-11 64.7
Msa0574420 MtrunA17_Chr7g0227291 20.902 244 151 7 233 450 233 460 7.22e-11 64.3
Msa0574420 MtrunA17_Chr1g0163451 23.457 243 160 6 233 453 255 493 8.17e-11 64.3
Msa0574420 MtrunA17_Chr7g0260821 20.705 454 296 15 41 453 40 470 9.90e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0574420 AT3G48320.1 36.145 498 284 8 11 487 3 487 3.63e-113 343
Msa0574420 AT5G07990.1 37.695 512 284 10 8 493 4 506 9.39e-113 343
Msa0574420 AT3G26300.1 34.870 499 292 8 12 487 7 495 8.41e-111 338
Msa0574420 AT2G30770.1 38.347 472 258 7 38 487 34 494 1.20e-109 335
Msa0574420 AT3G26310.1 35.800 500 285 10 14 489 9 496 3.62e-109 333
Msa0574420 AT4G36220.1 37.630 481 255 9 44 490 47 516 5.50e-109 333
Msa0574420 AT3G48280.1 35.341 498 292 8 8 487 1 486 8.88e-109 332
Msa0574420 AT3G48310.1 35.924 476 274 6 28 485 23 485 1.21e-108 332
Msa0574420 AT1G11610.1 37.288 472 263 6 38 487 34 494 4.54e-108 330
Msa0574420 AT3G48270.1 36.345 487 274 8 27 495 21 489 4.58e-108 330
Msa0574420 AT5G57260.1 35.903 493 274 10 28 490 21 501 5.21e-108 330
Msa0574420 AT1G11610.2 37.053 475 266 6 38 490 34 497 1.27e-107 330
Msa0574420 AT3G26330.1 35.833 480 276 8 35 491 29 499 6.79e-107 328
Msa0574420 AT2G30750.1 38.477 486 263 7 24 487 23 494 3.06e-104 321
Msa0574420 AT5G24950.1 35.805 472 271 6 38 487 33 494 4.24e-104 320
Msa0574420 AT3G26320.1 35.124 484 272 9 31 486 25 494 5.09e-104 320
Msa0574420 AT3G48290.1 35.908 479 276 6 27 487 23 488 1.18e-103 319
Msa0574420 AT3G48300.1 37.259 467 258 8 39 487 31 480 3.79e-103 317
Msa0574420 AT3G48300.2 37.259 467 258 8 39 487 33 482 4.02e-103 317
Msa0574420 AT3G26290.1 34.362 486 287 6 28 490 22 498 3.06e-102 315
Msa0574420 AT3G26290.2 34.362 486 287 6 28 490 35 511 3.67e-102 316
Msa0574420 AT2G45560.1 34.971 509 292 11 10 489 9 507 4.77e-102 315
Msa0574420 AT5G25120.1 34.980 506 283 11 9 487 5 491 9.28e-102 314
Msa0574420 AT5G24960.1 36.575 473 266 7 38 487 34 495 1.53e-100 311
Msa0574420 AT1G13080.1 35.088 513 292 11 6 489 1 501 1.27e-99 309
Msa0574420 AT4G13310.1 35.934 487 277 9 24 487 21 495 1.91e-99 308
Msa0574420 AT5G25140.1 34.387 506 286 12 9 487 5 491 5.25e-99 307
Msa0574420 AT5G04330.1 36.289 485 267 11 37 490 32 505 5.52e-99 308
Msa0574420 AT5G42590.1 34.127 504 295 10 8 487 5 495 6.70e-99 307
Msa0574420 AT5G06900.1 34.578 509 285 10 5 489 8 492 2.64e-98 306
Msa0574420 AT3G48290.2 34.059 505 276 7 27 487 23 514 7.67e-98 305
Msa0574420 AT4G13290.1 35.197 483 272 8 28 487 24 488 1.67e-97 303
Msa0574420 AT4G31500.1 34.077 493 284 11 23 487 17 496 4.87e-97 302
Msa0574420 AT2G45550.1 32.347 507 310 9 8 489 9 507 6.77e-97 302
Msa0574420 AT2G02580.1 34.394 503 295 9 12 490 7 498 2.06e-96 300
Msa0574420 AT3G26150.1 33.861 505 299 9 10 487 3 499 1.79e-94 296
Msa0574420 AT1G33720.1 33.908 522 284 14 4 486 5 504 3.17e-94 295
Msa0574420 AT5G25130.1 33.004 506 293 10 9 487 5 491 5.07e-94 294
Msa0574420 AT3G26160.1 33.730 504 299 10 10 486 3 498 2.17e-93 293
Msa0574420 AT3G26170.1 33.465 505 301 9 10 487 3 499 3.16e-93 292
Msa0574420 AT4G12320.1 35.029 511 292 10 9 493 18 514 3.57e-93 293
Msa0574420 AT3G26280.1 34.638 511 276 14 15 490 15 502 4.00e-93 292
Msa0574420 AT3G26180.1 35.178 506 290 11 9 487 5 499 5.17e-93 292
Msa0574420 AT3G26280.2 34.638 511 276 14 15 490 32 519 5.63e-93 292
Msa0574420 AT2G45570.1 34.175 515 292 14 6 489 10 508 6.00e-93 292
Msa0574420 AT1G01280.1 34.244 476 270 8 46 490 41 504 7.82e-93 291
Msa0574420 AT5G25180.1 33.539 486 281 9 28 486 20 490 1.23e-92 291
Msa0574420 AT3G26270.1 34.631 488 279 8 28 487 23 498 1.63e-92 290
Msa0574420 AT1G13110.1 31.890 508 311 9 6 486 1 500 1.79e-92 290
Msa0574420 AT3G26210.1 34.449 508 301 9 6 489 1 500 8.04e-92 289
Msa0574420 AT4G12300.1 34.423 520 294 12 1 490 7 509 1.75e-91 288
Msa0574420 AT4G13770.1 33.199 497 299 10 15 486 8 496 5.09e-91 286
Msa0574420 AT5G44620.1 34.322 472 273 8 44 490 53 512 2.63e-90 285
Msa0574420 AT3G44250.1 33.263 475 284 8 38 487 29 495 8.42e-90 283
Msa0574420 AT2G24180.1 34.917 484 271 12 28 486 31 495 5.97e-89 281
Msa0574420 AT2G45580.1 33.045 463 282 7 47 486 48 505 7.83e-89 281
Msa0574420 AT3G26190.1 33.753 477 280 10 38 487 29 496 2.24e-88 280
Msa0574420 AT3G53280.1 32.911 474 286 8 38 487 29 494 3.41e-88 279
Msa0574420 AT3G53300.1 33.820 479 283 8 35 487 26 496 7.29e-88 278
Msa0574420 AT3G26200.1 33.333 477 282 10 38 487 29 496 2.50e-85 272
Msa0574420 AT1G13090.2 33.557 447 262 9 38 458 29 466 3.29e-85 271
Msa0574420 AT3G26230.1 34.200 500 295 11 14 487 4 495 3.34e-85 271
Msa0574420 AT4G22690.1 32.196 469 282 8 46 490 93 549 5.31e-84 270
Msa0574420 AT3G61040.1 32.000 475 286 8 36 486 32 493 6.46e-84 268
Msa0574420 AT2G42250.1 31.890 508 307 7 8 487 12 508 1.89e-83 267
Msa0574420 AT4G22710.1 31.983 469 283 8 46 490 62 518 1.94e-83 268
Msa0574420 AT3G26220.1 33.735 498 295 9 16 486 8 497 3.01e-83 266
Msa0574420 AT4G12330.1 33.615 473 274 10 44 490 53 511 4.19e-83 266
Msa0574420 AT5G67310.1 32.803 503 286 16 8 484 18 494 5.82e-83 266
Msa0574420 AT4G31940.1 32.381 525 302 11 8 490 5 518 2.86e-81 262
Msa0574420 AT4G12310.1 33.755 474 282 8 44 493 51 516 4.08e-81 261
Msa0574420 AT4G31970.1 32.950 522 302 12 8 490 5 517 3.35e-80 259
Msa0574420 AT3G52970.1 31.014 503 313 11 12 486 14 510 1.91e-79 257
Msa0574420 AT2G25160.1 32.319 526 302 14 6 491 3 514 7.37e-79 256
Msa0574420 AT2G40890.1 29.545 484 299 9 36 490 26 496 1.11e-78 254
Msa0574420 AT3G52970.2 30.174 517 313 11 12 486 14 524 2.65e-77 252
Msa0574420 AT4G37310.1 30.695 518 303 15 6 489 5 500 3.00e-77 251
Msa0574420 AT4G37340.1 32.353 510 289 15 10 489 6 489 3.20e-76 248
Msa0574420 AT5G57220.1 31.590 497 285 15 15 485 12 479 2.27e-74 243
Msa0574420 AT3G26830.1 29.916 478 296 13 6 457 1 465 5.19e-73 239
Msa0574420 AT5G06905.1 29.832 476 291 10 16 455 9 477 6.84e-73 240
Msa0574420 AT4G37430.1 30.469 512 294 18 9 485 4 488 7.64e-73 239
Msa0574420 AT4G37410.1 30.957 491 284 18 15 476 12 476 1.04e-72 239
Msa0574420 AT1G13100.1 31.746 441 260 12 47 458 38 466 4.68e-72 237
Msa0574420 AT5G35715.1 30.995 442 271 9 72 487 1 434 1.00e-71 234
Msa0574420 AT4G37400.1 31.635 471 274 13 46 489 40 489 1.09e-71 236
Msa0574420 AT3G32047.1 30.928 485 277 12 10 457 13 476 1.30e-71 236
Msa0574420 AT4G37330.1 31.693 508 292 15 8 489 7 485 2.16e-71 235
Msa0574420 AT4G37320.1 30.588 510 298 16 9 489 6 488 3.94e-71 234
Msa0574420 AT3G25180.1 30.156 514 318 13 8 490 4 507 4.76e-71 235
Msa0574420 AT4G15360.1 30.452 509 310 13 9 488 11 504 7.64e-71 234
Msa0574420 AT3G20940.1 30.219 503 296 15 22 489 27 509 3.64e-69 230
Msa0574420 AT4G37360.1 31.641 512 293 16 8 489 4 488 5.85e-69 229
Msa0574420 AT4G31950.1 31.619 525 294 14 8 490 5 506 7.64e-69 229
Msa0574420 AT3G20950.1 30.134 521 303 14 8 489 14 512 9.52e-69 229
Msa0574420 AT3G20140.1 30.143 491 305 11 23 489 28 504 3.57e-68 227
Msa0574420 AT4G20240.1 33.166 398 236 5 38 415 34 421 3.62e-68 226
Msa0574420 AT3G28740.1 33.817 482 265 15 38 489 40 497 1.58e-67 226
Msa0574420 AT2G14100.1 28.320 512 309 12 15 491 21 509 2.67e-67 225
Msa0574420 AT1G74550.1 31.579 513 286 17 8 490 4 481 5.17e-67 223
Msa0574420 AT4G37370.1 30.000 510 298 15 10 489 6 486 5.90e-67 224
Msa0574420 AT4G15330.1 30.720 472 285 10 14 457 16 473 1.90e-66 223
Msa0574420 AT5G36220.1 29.320 515 301 15 8 489 10 494 3.87e-66 222
Msa0574420 AT4G15350.1 30.472 466 279 11 48 483 45 495 8.54e-66 221
Msa0574420 AT1G33720.4 33.333 384 214 10 132 486 2 372 1.82e-65 216
Msa0574420 AT1G33720.3 33.333 384 214 10 132 486 2 372 1.82e-65 216
Msa0574420 AT1G33720.5 33.333 384 214 10 132 486 2 372 1.82e-65 216
Msa0574420 AT5G10610.1 28.685 502 309 11 9 486 11 487 1.19e-64 218
Msa0574420 AT1G33730.1 33.245 376 209 10 139 485 5 367 2.00e-64 213
Msa0574420 AT1G33730.2 33.245 376 209 10 139 485 5 367 2.00e-64 213
Msa0574420 AT3G20130.1 29.909 438 268 9 48 457 53 479 5.69e-64 216
Msa0574420 AT2G23190.1 29.707 478 282 12 8 456 50 502 1.00e-63 216
Msa0574420 AT5G10600.1 28.770 504 307 12 8 485 25 502 1.62e-63 215
Msa0574420 AT1G50560.1 30.252 476 284 12 48 491 54 513 1.92e-63 215
Msa0574420 AT3G20090.2 29.091 495 306 11 8 473 14 492 2.43e-63 215
Msa0574420 AT2G23220.1 31.027 448 259 11 38 456 47 473 5.11e-63 214
Msa0574420 AT1G74540.1 31.250 496 277 17 14 474 5 471 5.47e-63 213
Msa0574420 AT2G46660.1 31.106 479 270 18 39 484 72 523 6.31e-63 214
Msa0574420 AT3G20120.4 29.630 513 309 13 12 489 11 506 7.91e-63 213
Msa0574420 AT1G50520.1 28.571 518 321 12 8 491 10 512 1.08e-62 213
Msa0574420 AT3G61880.1 30.103 485 272 16 39 484 68 524 1.95e-62 213
Msa0574420 AT1G58260.1 27.495 531 325 13 3 490 7 520 2.14e-62 213
Msa0574420 AT5G24960.2 34.146 369 211 6 38 384 34 392 3.85e-62 208
Msa0574420 AT3G61880.2 30.103 485 272 16 39 484 68 524 4.43e-62 212
Msa0574420 AT2G45580.2 32.456 342 203 7 171 489 18 354 1.44e-61 206
Msa0574420 AT3G20110.1 28.800 500 316 11 10 485 10 493 2.13e-61 209
Msa0574420 AT3G20100.1 29.905 525 300 15 8 490 11 509 2.63e-61 209
Msa0574420 AT4G13310.2 33.246 382 220 9 24 382 21 390 4.51e-61 205
Msa0574420 AT1G33720.2 31.450 407 216 11 132 486 2 397 1.22e-60 204
Msa0574420 AT1G01190.2 29.365 504 279 17 23 483 61 530 3.32e-60 207
Msa0574420 AT2G27000.1 30.275 436 263 10 51 457 54 477 4.04e-60 206
Msa0574420 AT1G01190.1 29.365 504 279 17 23 483 56 525 4.83e-60 206
Msa0574420 AT1G28430.1 29.184 490 306 9 12 474 15 490 1.72e-58 202
Msa0574420 AT5G09970.1 31.862 521 286 22 12 487 37 533 3.76e-56 196
Msa0574420 AT1G13080.2 30.874 366 215 9 152 489 28 383 4.36e-56 192
Msa0574420 AT4G20240.2 32.153 367 219 5 38 384 34 390 6.06e-56 192
Msa0574420 AT1G74110.1 28.942 539 308 21 2 486 18 535 6.56e-56 195
Msa0574420 AT5G47990.1 28.450 471 292 11 48 489 53 507 1.01e-55 194
Msa0574420 AT5G42580.1 27.237 503 319 10 12 490 15 494 1.51e-55 193
Msa0574420 AT1G13710.1 30.126 478 275 17 32 476 48 499 2.27e-55 193
Msa0574420 AT4G39950.1 27.419 496 307 13 4 462 28 507 3.64e-55 193
Msa0574420 AT1G66540.1 31.658 398 221 12 120 489 1 375 3.72e-55 189
Msa0574420 AT4G39950.2 27.419 496 307 13 4 462 68 547 4.57e-55 194
Msa0574420 AT1G79370.1 26.265 514 312 12 1 462 9 507 5.55e-55 193
Msa0574420 AT2G22330.1 26.559 497 317 11 4 462 23 509 2.40e-54 191
Msa0574420 AT2G22330.2 26.559 497 317 11 4 462 46 532 2.44e-54 192
Msa0574420 AT3G20960.2 27.790 457 285 11 62 489 67 507 2.55e-54 191
Msa0574420 AT3G20080.2 28.986 483 296 10 38 489 43 509 1.93e-53 188
Msa0574420 AT3G20080.1 28.986 483 296 10 38 489 43 509 1.93e-53 188
Msa0574420 AT4G15330.2 28.390 472 268 11 14 457 16 445 2.71e-52 184
Msa0574420 AT3G53290.1 29.782 413 261 12 87 487 8 403 1.16e-51 181
Msa0574420 AT2G25160.2 30.270 370 233 7 5 357 2 363 1.38e-51 181
Msa0574420 AT5G05260.2 27.881 538 310 17 11 490 5 522 5.71e-50 179
Msa0574420 AT3G20130.2 27.169 438 252 10 48 457 53 451 8.07e-49 175
Msa0574420 AT2G05180.1 30.137 438 254 12 8 409 5 426 6.44e-48 171
Msa0574420 AT2G27010.1 28.111 434 257 10 51 457 50 455 1.18e-47 172
Msa0574420 AT3G61040.2 28.841 371 228 7 36 382 32 390 1.57e-46 167
Msa0574420 AT1G66540.2 34.667 300 156 9 207 489 40 316 1.58e-46 165
Msa0574420 AT5G05260.1 27.612 536 282 17 11 490 5 490 3.54e-46 168
Msa0574420 AT3G26180.2 35.185 270 149 7 236 487 104 365 2.17e-45 163
Msa0574420 AT3G26180.2 48.214 112 55 1 9 120 5 113 6.22e-23 100
Msa0574420 AT1G16400.1 25.279 538 342 13 2 493 7 530 1.22e-44 164
Msa0574420 AT1G64940.1 26.511 513 319 16 15 481 11 511 2.25e-44 163
Msa0574420 AT2G45580.3 27.855 359 232 6 47 382 48 402 9.97e-44 159
Msa0574420 AT2G30490.1 28.043 460 280 14 48 473 44 486 1.13e-43 161
Msa0574420 AT1G16410.1 24.609 512 333 11 2 467 4 508 2.03e-43 161
Msa0574420 AT4G15380.1 26.039 457 301 9 62 495 68 510 1.08e-42 159
Msa0574420 AT5G04630.1 27.146 501 320 16 8 476 8 495 1.29e-42 159
Msa0574420 AT3G20120.2 27.979 386 234 10 132 489 1 370 1.36e-42 155
Msa0574420 AT3G20120.3 27.979 386 234 10 132 489 1 370 1.36e-42 155
Msa0574420 AT3G20120.1 27.979 386 234 10 132 489 1 370 1.36e-42 155
Msa0574420 AT1G64950.1 27.143 490 299 15 38 481 33 510 2.25e-42 158
Msa0574420 AT3G20960.1 26.859 417 260 12 102 489 4 404 8.61e-42 154
Msa0574420 AT3G10560.1 27.917 480 297 15 8 455 18 480 2.32e-41 155
Msa0574420 AT2G12190.1 26.585 489 310 15 38 489 33 509 1.72e-40 152
Msa0574420 AT3G25180.2 27.520 367 246 9 8 360 4 364 4.85e-39 146
Msa0574420 AT1G64930.1 24.949 489 317 16 38 489 33 508 4.66e-38 146
Msa0574420 AT3G20090.1 26.216 370 229 10 132 473 1 354 1.48e-37 142
Msa0574420 AT1G13090.1 31.225 253 160 4 38 282 29 275 1.87e-37 139
Msa0574420 AT5G36220.2 31.142 289 158 8 218 489 84 348 6.35e-37 139
Msa0574420 AT3G03470.1 25.000 468 308 11 38 471 32 490 6.79e-37 142
Msa0574420 AT2G45560.2 31.071 280 180 6 10 277 9 287 8.02e-37 138
Msa0574420 AT5G04660.1 26.478 423 270 11 62 455 69 479 1.33e-36 142
Msa0574420 AT1G11600.1 26.233 507 315 18 10 472 3 494 6.86e-36 140
Msa0574420 AT3G20080.4 26.289 388 240 9 132 489 1 372 6.90e-34 132
Msa0574420 AT3G20080.5 26.289 388 240 9 132 489 1 372 6.90e-34 132
Msa0574420 AT3G20080.6 26.289 388 240 9 132 489 1 372 6.90e-34 132
Msa0574420 AT3G20080.3 26.289 388 240 9 132 489 1 372 6.90e-34 132
Msa0574420 AT5G61320.1 26.959 434 282 14 61 476 58 474 2.43e-33 132
Msa0574420 AT2G45560.3 32.189 233 147 5 10 232 9 240 1.34e-32 125
Msa0574420 AT3G10570.1 26.737 475 299 17 44 485 50 508 5.35e-32 129
Msa0574420 AT3G20935.1 26.027 292 172 8 235 489 50 334 2.90e-31 124
Msa0574420 AT4G20235.1 31.317 281 151 11 10 280 6 254 5.05e-31 123
Msa0574420 AT4G20235.1 42.857 84 48 0 382 465 255 338 2.64e-17 83.6
Msa0574420 AT5G35917.1 23.937 447 300 12 38 454 43 479 7.77e-31 125
Msa0574420 AT1G64900.1 25.826 484 297 16 45 486 39 502 3.32e-30 123
Msa0574420 AT1G16410.2 23.798 416 270 9 2 376 4 413 8.75e-29 118
Msa0574420 AT5G25900.1 24.375 480 301 15 43 485 49 503 1.54e-28 119
Msa0574420 AT3G53305.1 40.000 125 65 2 363 487 211 325 2.45e-26 110
Msa0574420 AT3G53305.1 31.013 158 104 2 72 224 1 158 5.96e-18 85.5
Msa0574420 AT1G63710.1 21.667 540 343 14 4 490 4 516 4.63e-22 99.8
Msa0574420 AT2G44890.1 23.563 522 324 19 13 486 13 507 1.51e-21 98.2
Msa0574420 AT4G27710.1 24.661 442 279 17 67 476 93 512 9.14e-21 95.9
Msa0574420 AT2G45510.1 22.351 519 334 17 13 486 13 507 5.93e-20 93.2
Msa0574420 AT3G14620.1 22.936 436 271 17 61 462 89 493 1.33e-19 92.0
Msa0574420 AT4G19230.1 24.116 481 284 20 8 457 6 436 6.16e-19 89.7
Msa0574420 AT2G26170.1 23.541 497 302 18 9 456 24 491 7.27e-19 89.7
Msa0574420 AT2G26710.1 26.282 312 198 10 166 457 189 488 1.74e-18 88.6
Msa0574420 AT1G65340.1 25.806 248 153 8 233 457 237 476 2.07e-18 88.6
Msa0574420 AT3G19270.2 24.124 485 282 17 9 457 6 440 3.07e-18 87.8
Msa0574420 AT5G24900.2 23.224 366 239 10 121 457 31 383 1.29e-17 85.5
Msa0574420 AT2G21910.1 21.186 472 305 18 35 457 26 479 1.44e-17 85.9
Msa0574420 AT2G44890.2 22.989 522 309 20 13 486 13 489 1.45e-17 85.9
Msa0574420 AT1G31800.1 22.124 452 307 13 68 487 139 577 1.56e-17 85.9
Msa0574420 AT1G34540.1 23.800 479 284 21 40 466 30 479 2.37e-17 85.1
Msa0574420 AT2G32440.2 21.444 471 305 17 12 453 19 453 2.70e-17 84.7
Msa0574420 AT2G32440.1 21.444 471 305 17 12 453 19 453 2.70e-17 84.7
Msa0574420 AT5G52320.1 25.200 250 163 9 233 463 237 481 2.78e-17 85.1
Msa0574420 AT5G52320.2 25.200 250 163 9 233 463 237 481 3.15e-17 84.7
Msa0574420 AT5G24900.1 23.224 366 239 10 121 457 148 500 3.23e-17 84.7
Msa0574420 AT4G19230.2 24.109 477 275 21 8 450 6 429 3.69e-17 84.3
Msa0574420 AT5G35920.1 35.556 135 81 3 361 493 21 151 4.13e-17 79.0
Msa0574420 AT1G57750.1 22.822 241 163 6 233 457 236 469 4.27e-17 84.3
Msa0574420 AT3G19270.1 24.017 483 281 17 9 455 6 438 5.38e-17 83.6
Msa0574420 AT3G48520.1 21.748 492 317 14 6 453 1 468 5.86e-17 84.0
Msa0574420 AT3G56630.1 24.194 496 299 21 12 458 4 471 6.20e-17 84.0
Msa0574420 AT5G45340.1 24.222 450 261 18 38 457 37 436 1.16e-16 82.8
Msa0574420 AT5G45340.2 24.944 449 253 19 38 456 37 431 5.41e-16 80.5
Msa0574420 AT2G27690.1 23.570 437 273 16 67 466 61 473 1.07e-15 80.1
Msa0574420 AT2G46950.1 23.113 424 277 13 56 453 139 539 1.13e-15 80.1
Msa0574420 AT5G24910.1 22.977 383 243 10 113 457 137 505 1.56e-15 79.7
Msa0574420 AT5G02900.1 21.654 254 163 7 233 457 205 451 2.05e-15 79.0
Msa0574420 AT1G47620.1 23.228 254 161 8 233 459 244 490 4.77e-15 78.2
Msa0574420 AT1G24540.1 21.308 474 295 17 40 457 42 493 7.94e-15 77.4
Msa0574420 AT5G23190.1 21.333 375 233 9 129 457 155 513 2.52e-14 75.9
Msa0574420 AT3G26125.1 22.642 265 169 6 226 457 244 505 6.79e-14 74.3
Msa0574420 AT3G14610.1 22.300 426 285 17 60 460 84 488 8.39e-14 73.9
Msa0574420 AT5G08250.1 22.490 249 156 4 233 451 202 443 9.26e-14 73.9
Msa0574420 AT5G08250.2 22.490 249 156 4 233 451 264 505 9.83e-14 73.9
Msa0574420 AT1G13140.1 24.809 262 159 8 226 457 244 497 1.11e-13 73.9
Msa0574420 AT5G52400.1 23.041 434 264 17 55 453 90 488 1.17e-13 73.6
Msa0574420 AT2G46960.2 21.839 435 272 14 56 453 82 485 1.22e-13 73.6
Msa0574420 AT4G32170.1 24.901 253 151 10 233 457 235 476 1.79e-13 73.2
Msa0574420 AT3G53130.1 23.855 415 263 19 67 446 107 503 2.33e-13 72.8
Msa0574420 AT1G13140.2 26.108 203 120 5 281 457 273 471 3.54e-13 72.0
Msa0574420 AT3G30180.1 20.971 515 304 16 14 486 11 464 3.71e-13 72.0
Msa0574420 AT5G38450.1 21.670 503 330 12 1 457 5 489 4.59e-13 71.6
Msa0574420 AT2G29090.2 20.796 452 295 16 31 457 43 456 8.64e-13 70.9
Msa0574420 AT2G29090.1 20.796 452 295 16 31 457 43 456 8.64e-13 70.9
Msa0574420 AT3G14630.1 22.350 434 285 15 49 460 81 484 1.24e-12 70.5
Msa0574420 AT2G26170.2 25.847 236 141 7 240 456 188 408 1.36e-12 70.1
Msa0574420 AT3G14630.2 22.350 434 285 15 49 460 136 539 1.68e-12 70.1
Msa0574420 AT3G14660.1 22.014 427 282 17 61 460 86 488 2.14e-12 69.7
Msa0574420 AT1G13150.1 26.000 200 119 5 287 457 291 490 2.19e-12 69.7
Msa0574420 AT3G14680.1 22.759 435 278 19 56 460 82 488 2.84e-12 69.3
Msa0574420 AT2G23180.1 21.875 256 162 8 233 457 237 485 4.48e-12 68.6
Msa0574420 AT3G01900.1 22.876 459 277 17 41 453 32 459 6.99e-12 68.2
Msa0574420 AT4G39510.1 25.600 250 147 11 233 453 235 474 7.35e-12 68.2
Msa0574420 AT3G14650.1 22.402 433 273 18 61 460 86 488 1.02e-11 67.4
Msa0574420 AT4G39490.1 20.741 270 162 8 231 457 229 489 1.63e-11 67.0
Msa0574420 AT5G14400.1 25.000 244 156 7 223 463 124 343 2.51e-11 65.9
Msa0574420 AT5G14400.2 25.000 244 156 7 223 463 178 397 3.17e-11 65.9
Msa0574420 AT3G61035.1 26.978 278 146 14 46 300 51 294 3.46e-11 65.1
Msa0574420 AT2G29090.3 23.560 191 118 4 288 457 178 361 5.39e-11 64.7
Msa0574420 AT1G75130.1 21.067 356 241 8 126 460 143 479 5.93e-11 65.1
Msa0574420 AT2G46960.1 21.189 387 240 12 103 453 12 369 9.04e-11 64.3

Find 121 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAGTAATTGTGAATTTA+TGG 0.093898 4_1:+77902138 Msa0574420:CDS
CAACAAGGGATGGAACTTTC+TGG 0.236112 4_1:+77900599 Msa0574420:CDS
TAATGGGCGGCTTCAAGTTT+TGG 0.252115 4_1:-77900290 None:intergenic
GAGGCAGAGGGAACTAAAAT+TGG 0.259782 4_1:+77900433 Msa0574420:CDS
CAAAACCAAATGGTATAAAT+TGG 0.267633 4_1:-77902259 None:intergenic
GCCGCCCATTATATTTCTTA+TGG 0.269120 4_1:+77900302 Msa0574420:CDS
CTTGAAGAAAGCTGCGAGTT+TGG 0.280948 4_1:+77900466 Msa0574420:CDS
AACATAATCAGCAAGATTAA+AGG 0.290541 4_1:-77900624 None:intergenic
CAATTTATACCATTTGGTTT+TGG 0.291423 4_1:+77902260 Msa0574420:CDS
TAGAACCATAAGAAATATAA+TGG 0.294386 4_1:-77900307 None:intergenic
ATTGTGAATTTATGGGCAAT+AGG 0.319374 4_1:+77902146 Msa0574420:CDS
CAAGCAAGTGTTTGGCTCTT+GGG 0.324170 4_1:-77902427 None:intergenic
AGCAGAGATTGTGTATAAAA+TGG 0.335708 4_1:+77900529 Msa0574420:CDS
CAAACTCGCAGCTTTCTTCA+AGG 0.342006 4_1:-77900465 None:intergenic
TCAGTCATGTCTAAATCATT+TGG 0.344527 4_1:-77902386 None:intergenic
AAGAGTAATTGTGAATTTAT+GGG 0.347221 4_1:+77902139 Msa0574420:CDS
GCGATGAAGGAAACATGTTT+TGG 0.365975 4_1:-77899971 None:intergenic
GCAAGCAAGTGTTTGGCTCT+TGG 0.367833 4_1:-77902428 None:intergenic
TTCTTATGGTTCTAAAGGTC+TGG 0.368004 4_1:+77900316 Msa0574420:CDS
CTACATTATCTAGCTCTTGT+TGG 0.369919 4_1:-77901960 None:intergenic
TTGAAGAAAGCTGCGAGTTT+GGG 0.377551 4_1:+77900467 Msa0574420:CDS
TGCCGCGGCAATCATGTCTA+AGG 0.380352 4_1:-77901863 None:intergenic
TTAGACATGACTGAAAAGTT+TGG 0.380456 4_1:+77902395 Msa0574420:CDS
GTGCCAACATATCGCCTTCA+TGG 0.384217 4_1:+77902452 Msa0574420:CDS
GATTTCCAATTTATACCATT+TGG 0.388122 4_1:+77902254 Msa0574420:CDS
TATATTTCTTATGGTTCTAA+AGG 0.389126 4_1:+77900311 Msa0574420:CDS
GAGGGAACTAAAATTGGCTT+TGG 0.393298 4_1:+77900439 Msa0574420:CDS
CCTATCATGTTACTACGTTT+AGG 0.395862 4_1:+77900185 Msa0574420:CDS
CATTGATCGAACAAACATAA+AGG 0.420979 4_1:+77901834 Msa0574420:CDS
TTATGAGGAGTTTGATTTGA+AGG 0.421023 4_1:+77900568 Msa0574420:CDS
CAAGAGCTAGATAATGTAGT+TGG 0.422201 4_1:+77901964 Msa0574420:CDS
ACCGAGGATGCTACAGTTGA+TGG 0.427794 4_1:+77902095 Msa0574420:CDS
TGGCACAGCAAGCAAGTGTT+TGG 0.431884 4_1:-77902435 None:intergenic
TCGCTGAATACGGAGCATAT+TGG 0.433456 4_1:+77900342 Msa0574420:CDS
CTTGGAGTGCGCGGTGTGGG+AGG 0.438745 4_1:-77900142 None:intergenic
AGTGTTTGAGAAGATAATTA+AGG 0.440966 4_1:+77901696 Msa0574420:CDS
TTGAATCGTTTGCGCCTTTG+AGG 0.441875 4_1:+77900414 Msa0574420:CDS
AGTTCACATGTGCAAAATGA+AGG 0.443328 4_1:+77901730 Msa0574420:CDS
TTCTGCAACCATTGTGGAGT+GGG 0.444366 4_1:+77901894 Msa0574420:CDS
AGGCTTGGAGTGCGCGGTGT+GGG 0.447148 4_1:-77900145 None:intergenic
GCTAGTCCAAGGTTTATTCC+AGG 0.460614 4_1:-77902296 None:intergenic
TTGTGAATTTATGGGCAATA+GGG 0.461878 4_1:+77902147 Msa0574420:CDS
GAGGAAGAGACAATGATTGT+TGG 0.463070 4_1:-77900215 None:intergenic
CCTAAACGTAGTAACATGAT+AGG 0.463172 4_1:-77900185 None:intergenic
AGAACCATAAGAAATATAAT+GGG 0.465835 4_1:-77900306 None:intergenic
AGGAAGAGACAATGATTGTT+GGG 0.467212 4_1:-77900214 None:intergenic
CGTCAGAGGGATCGATCGTC+TGG 0.468578 4_1:-77901798 None:intergenic
GCTGGGGTGTAGTGTTTATG+AGG 0.469485 4_1:+77900553 Msa0574420:CDS
TTGGAGTGCGCGGTGTGGGA+GGG 0.475749 4_1:-77900141 None:intergenic
TCTCTCTGGATAAAATTCTT+CGG 0.486966 4_1:-77902198 None:intergenic
GAGACACCCACCAGGTCCAC+GGG 0.490669 4_1:+77900082 Msa0574420:CDS
AGAAACAAGGGAAGCGATGA+AGG 0.491042 4_1:-77899984 None:intergenic
AAGGAATTGTTCAGCGGCTG+AGG 0.492310 4_1:-77900237 None:intergenic
TAAACTTGTTGTAGCTCAGT+TGG 0.493751 4_1:+77902325 Msa0574420:CDS
CGTTTGCGCCTTTGAGGCAG+AGG 0.495141 4_1:+77900420 Msa0574420:CDS
TATGAGGAGTTTGATTTGAA+GGG 0.495160 4_1:+77900569 Msa0574420:CDS
TAGGGAGAGATTCTAAGATA+TGG 0.496511 4_1:+77902165 Msa0574420:CDS
CCACGGGGCTATCCAGTCAT+TGG 0.501309 4_1:+77900098 Msa0574420:CDS
GTCATGTTGCATTCCCATGA+AGG 0.507559 4_1:-77902466 None:intergenic
TTTGGTCGAAGAGGATGTCC+TGG 0.512961 4_1:+77902278 Msa0574420:CDS
ATTGGTAACCTCCACATGTT+GGG 0.515767 4_1:+77900116 Msa0574420:CDS
ACCATCAACTGTAGCATCCT+CGG 0.515998 4_1:-77902096 None:intergenic
AGTTGGGAAGAACAAATTAG+TGG 0.519704 4_1:+77901981 Msa0574420:CDS
AAGAGCTAGATAATGTAGTT+GGG 0.523861 4_1:+77901965 Msa0574420:CDS
TTTAGTTCCCTCTGCCTCAA+AGG 0.525444 4_1:-77900428 None:intergenic
GATTGTGTATAAAATGGTGC+TGG 0.529542 4_1:+77900535 Msa0574420:CDS
TAATTATCTTCTCAAACACT+TGG 0.532690 4_1:-77901693 None:intergenic
CCTCTTCGACCAAAACCAAA+TGG 0.535513 4_1:-77902269 None:intergenic
ATGTGGAGGTTACCAATGAC+TGG 0.536375 4_1:-77900110 None:intergenic
GTTGACTCGCGCGGCACAAG+TGG 0.538418 4_1:-77902074 None:intergenic
GAGTGTGAAAGTGAGAAACA+AGG 0.542496 4_1:-77899997 None:intergenic
TGCCAACATATCGCCTTCAT+GGG 0.546583 4_1:+77902453 Msa0574420:CDS
TCTTGGATGCCTCATGAGCT+CGG 0.552867 4_1:-77901923 None:intergenic
GAATTGTTCAGCGGCTGAGG+AGG 0.557177 4_1:-77900234 None:intergenic
GGAGACACCCACCAGGTCCA+CGG 0.557396 4_1:+77900081 Msa0574420:CDS
GGATGTCCTGGAATAAACCT+TGG 0.558078 4_1:+77902290 Msa0574420:CDS
GTTTAACTGTAGCTAGTCCA+AGG 0.558337 4_1:-77902307 None:intergenic
ATGAGGAGTTTGATTTGAAG+GGG 0.560350 4_1:+77900570 Msa0574420:CDS
CATTGGTAACCTCCACATGT+TGG 0.560762 4_1:+77900115 Msa0574420:CDS
AAGGCTTGGAGTGCGCGGTG+TGG 0.562042 4_1:-77900146 None:intergenic
ACTGGATAGCCCCGTGGACC+TGG 0.564747 4_1:-77900092 None:intergenic
ACATGGCTTTGTTCGTCAGA+GGG 0.565988 4_1:-77901811 None:intergenic
TTCCCATGAAGGCGATATGT+TGG 0.566530 4_1:-77902455 None:intergenic
AGTGTGAAAGTGAGAAACAA+GGG 0.567290 4_1:-77899996 None:intergenic
GGGGCAAATTCAACAAGGGA+TGG 0.571251 4_1:+77900589 Msa0574420:CDS
GACATGGCTTTGTTCGTCAG+AGG 0.576994 4_1:-77901812 None:intergenic
TGGACAAGGCTTGGAGTGCG+CGG 0.589981 4_1:-77900151 None:intergenic
GTTCACATGTGCAAAATGAA+GGG 0.590723 4_1:+77901731 Msa0574420:CDS
CAAGAGAACTGCTAAAGCAA+TGG 0.592162 4_1:+77901669 Msa0574420:CDS
GTGGGAGGGTACCCAACATG+TGG 0.595079 4_1:-77900127 None:intergenic
GAAAGCTGCGAGTTTGGGTG+AGG 0.601408 4_1:+77900472 Msa0574420:CDS
GGATAGCCCCGTGGACCTGG+TGG 0.605143 4_1:-77900089 None:intergenic
ATCATTTGGAGTCATACTCG+AGG 0.608908 4_1:-77902372 None:intergenic
TGTTTGTTCGATCAATGACA+TGG 0.610497 4_1:-77901828 None:intergenic
ATTGTGTATAAAATGGTGCT+GGG 0.611119 4_1:+77900536 Msa0574420:CDS
TGCAGAAGTGTCAAATGCCG+CGG 0.612941 4_1:-77901878 None:intergenic
ACGGAGGAACAAGGTGATGA+CGG 0.616587 4_1:-77900033 None:intergenic
CTTCTGCAACCATTGTGGAG+TGG 0.617354 4_1:+77901893 Msa0574420:CDS
ACCATAAGAAATATAATGGG+CGG 0.617553 4_1:-77900303 None:intergenic
TCATTTGGAGTCATACTCGA+GGG 0.617840 4_1:-77902371 None:intergenic
GTTTGCGCCTTTGAGGCAGA+GGG 0.618820 4_1:+77900421 Msa0574420:CDS
TGACACTTCTGCAACCATTG+TGG 0.619327 4_1:+77901888 Msa0574420:CDS
TAAATTGGAAATCATGTCCA+CGG 0.622222 4_1:-77902244 None:intergenic
AGCCTTAGACATGATTGCCG+CGG 0.623846 4_1:+77901861 Msa0574420:CDS
TTGAAGGGGCAAATTCAACA+AGG 0.624457 4_1:+77900584 Msa0574420:CDS
GATGTGAGCGAGTTTGTGCA+TGG 0.626465 4_1:+77900500 Msa0574420:CDS
TTGTTTACGACGGAGGAACA+AGG 0.627386 4_1:-77900042 None:intergenic
ATATTGGCGTAACATGAGGA+AGG 0.631784 4_1:+77900358 Msa0574420:CDS
GCATCCTCGGTTGACTCGCG+CGG 0.634538 4_1:-77902083 None:intergenic
GAGCATATTGGCGTAACATG+AGG 0.635624 4_1:+77900354 Msa0574420:CDS
GATAGCCCCGTGGACCTGGT+GGG 0.638517 4_1:-77900088 None:intergenic
GGGCTTTATCCGAGCTCATG+AGG 0.642594 4_1:+77901914 Msa0574420:CDS
GGAGGGTACCCAACATGTGG+AGG 0.658459 4_1:-77900124 None:intergenic
TGTGCCGCGCGAGTCAACCG+AGG 0.662448 4_1:+77902079 Msa0574420:CDS
TGGGAAGAACAAATTAGTGG+AGG 0.672417 4_1:+77901984 Msa0574420:CDS
AATGATCGGAGACACCCACC+AGG 0.674600 4_1:+77900074 Msa0574420:CDS
GGATAAAGCCCACTCCACAA+TGG 0.681262 4_1:-77901902 None:intergenic
TGAAGGGGCAAATTCAACAA+GGG 0.682084 4_1:+77900585 Msa0574420:CDS
TTGTGTATAAAATGGTGCTG+GGG 0.707198 4_1:+77900537 Msa0574420:CDS
CCAATGACTGGATAGCCCCG+TGG 0.735835 4_1:-77900098 None:intergenic
AGACACCCACCAGGTCCACG+GGG 0.737960 4_1:+77900083 Msa0574420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGGTAGTAATTAATATAT+TGG - chr4_1:77900897-77900916 None:intergenic 15.0%
!! TCCTATTTATAAGAAAAATT+TGG + chr4_1:77901418-77901437 Msa0574420:intron 15.0%
!! CCTATTTATAAGAAAAATTT+GGG + chr4_1:77901419-77901438 Msa0574420:intron 15.0%
!! AAAACAAAACTTAATGTATT+TGG - chr4_1:77901481-77901500 None:intergenic 15.0%
!! AACAACCTAAAAATAATGAT+CGG + chr4_1:77900060-77900079 Msa0574420:CDS 20.0%
!! AGAACCATAAGAAATATAAT+GGG - chr4_1:77900309-77900328 None:intergenic 20.0%
!! TAGAACCATAAGAAATATAA+TGG - chr4_1:77900310-77900329 None:intergenic 20.0%
!!! TATATTTCTTATGGTTCTAA+AGG + chr4_1:77900311-77900330 Msa0574420:CDS 20.0%
!! CATGAAATTCAATTGTTATA+AGG + chr4_1:77900679-77900698 Msa0574420:intron 20.0%
!! ACAAGATTAAACTAATTCAT+TGG - chr4_1:77901126-77901145 None:intergenic 20.0%
!!! CCCAAATTTTTCTTATAAAT+AGG - chr4_1:77901422-77901441 None:intergenic 20.0%
!! CAATAAAAGCTAAATAACTT+AGG - chr4_1:77901628-77901647 None:intergenic 20.0%
!!! TTATTTAGCTTTTATTGTCA+GGG + chr4_1:77901631-77901650 Msa0574420:intron 20.0%
!! AAGAGTAATTGTGAATTTAT+GGG + chr4_1:77902139-77902158 Msa0574420:CDS 20.0%
!!! TATTTTTAGGTTGTTTACGA+CGG - chr4_1:77900055-77900074 None:intergenic 25.0%
! AACATAATCAGCAAGATTAA+AGG - chr4_1:77900627-77900646 None:intergenic 25.0%
! ATTTGAGCTTCATTCAAATT+AGG - chr4_1:77900805-77900824 None:intergenic 25.0%
!! CTCAAATATTTGAAGTTCTT+AGG + chr4_1:77900818-77900837 Msa0574420:intron 25.0%
! TCTTATAATAATTGACCGAA+GGG + chr4_1:77900938-77900957 Msa0574420:intron 25.0%
! GAACTTTCTCTTTCAATTTA+AGG + chr4_1:77900981-77901000 Msa0574420:intron 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr4_1:77901310-77901329 None:intergenic 25.0%
!!! TTAGCTACTTTTATGCTATA+AGG - chr4_1:77901365-77901384 None:intergenic 25.0%
!!! TCAACAAAAGTTGATGTATT+TGG + chr4_1:77901442-77901461 Msa0574420:intron 25.0%
! TCAACTTTCTCATTGTAAAT+AGG + chr4_1:77901530-77901549 Msa0574420:intron 25.0%
!!! GTTATTTAGCTTTTATTGTC+AGG + chr4_1:77901630-77901649 Msa0574420:intron 25.0%
! TAATTATCTTCTCAAACACT+TGG - chr4_1:77901696-77901715 None:intergenic 25.0%
! AGTGTTTGAGAAGATAATTA+AGG + chr4_1:77901696-77901715 Msa0574420:CDS 25.0%
! TAAGTTAGATATTGTGATCA+TGG + chr4_1:77902025-77902044 Msa0574420:intron 25.0%
! CAAGAGTAATTGTGAATTTA+TGG + chr4_1:77902138-77902157 Msa0574420:CDS 25.0%
! GATTTCCAATTTATACCATT+TGG + chr4_1:77902254-77902273 Msa0574420:CDS 25.0%
! CAAAACCAAATGGTATAAAT+TGG - chr4_1:77902262-77902281 None:intergenic 25.0%
!!! CAATTTATACCATTTGGTTT+TGG + chr4_1:77902260-77902279 Msa0574420:CDS 25.0%
!! TGTCTCCGATCATTATTTTT+AGG - chr4_1:77900068-77900087 None:intergenic 30.0%
!!! TGTTTTAAGGAATTGTTCAG+CGG - chr4_1:77900246-77900265 None:intergenic 30.0%
! ACCATAAGAAATATAATGGG+CGG - chr4_1:77900306-77900325 None:intergenic 30.0%
AGCAGAGATTGTGTATAAAA+TGG + chr4_1:77900529-77900548 Msa0574420:CDS 30.0%
ATTGTGTATAAAATGGTGCT+GGG + chr4_1:77900536-77900555 Msa0574420:CDS 30.0%
!! TTATGAGGAGTTTGATTTGA+AGG + chr4_1:77900568-77900587 Msa0574420:CDS 30.0%
!! TATGAGGAGTTTGATTTGAA+GGG + chr4_1:77900569-77900588 Msa0574420:CDS 30.0%
AGATCAAAAACTCCAAGAAA+AGG - chr4_1:77900650-77900669 None:intergenic 30.0%
CTCGTGTTTATGTAAAAAAG+AGG + chr4_1:77900870-77900889 Msa0574420:intron 30.0%
!!! AGTTCACTTTTTAGAGACTA+AGG - chr4_1:77900915-77900934 None:intergenic 30.0%
CTCTTATAATAATTGACCGA+AGG + chr4_1:77900937-77900956 Msa0574420:intron 30.0%
AAAGTTCACAAGACATATCT+TGG - chr4_1:77900968-77900987 None:intergenic 30.0%
!! TTCTAGTTTATGCTAGTACT+AGG - chr4_1:77901025-77901044 None:intergenic 30.0%
!!! ATCATTTTGGGGTTATACTT+AGG + chr4_1:77901194-77901213 Msa0574420:intron 30.0%
!!! TCATTTTGGGGTTATACTTA+GGG + chr4_1:77901195-77901214 Msa0574420:intron 30.0%
! AGCTTGTTTGAACTTAGTTA+AGG + chr4_1:77901230-77901249 Msa0574420:intron 30.0%
GCTTGTTTGAACTTAGTTAA+GGG + chr4_1:77901231-77901250 Msa0574420:intron 30.0%
TTCTTATAAATAGGACCAGA+GGG - chr4_1:77901413-77901432 None:intergenic 30.0%
TTTCTTATAAATAGGACCAG+AGG - chr4_1:77901414-77901433 None:intergenic 30.0%
GGATACGCATGTTAATTAAT+TGG - chr4_1:77901597-77901616 None:intergenic 30.0%
TAAATAACTTAGGCCATGAT+TGG - chr4_1:77901618-77901637 None:intergenic 30.0%
ATTGTCAGGGATTAAAAAGA+AGG + chr4_1:77901644-77901663 Msa0574420:intron 30.0%
CATTGATCGAACAAACATAA+AGG + chr4_1:77901834-77901853 Msa0574420:CDS 30.0%
! TGGAGATTTTTCATTACTCT+TGG - chr4_1:77901943-77901962 None:intergenic 30.0%
AAGAGCTAGATAATGTAGTT+GGG + chr4_1:77901965-77901984 Msa0574420:CDS 30.0%
ATTGTGAATTTATGGGCAAT+AGG + chr4_1:77902146-77902165 Msa0574420:CDS 30.0%
TTGTGAATTTATGGGCAATA+GGG + chr4_1:77902147-77902166 Msa0574420:CDS 30.0%
TCTCTCTGGATAAAATTCTT+CGG - chr4_1:77902201-77902220 None:intergenic 30.0%
! ATTTTATCCAGAGAGATTTG+TGG + chr4_1:77902205-77902224 Msa0574420:CDS 30.0%
! TTTTTATCCACAAATCTCTC+TGG - chr4_1:77902215-77902234 None:intergenic 30.0%
GATAAAAATTTAGACTACCG+TGG + chr4_1:77902227-77902246 Msa0574420:CDS 30.0%
TAAATTGGAAATCATGTCCA+CGG - chr4_1:77902247-77902266 None:intergenic 30.0%
TCAGTCATGTCTAAATCATT+TGG - chr4_1:77902389-77902408 None:intergenic 30.0%
TTAGACATGACTGAAAAGTT+TGG + chr4_1:77902395-77902414 Msa0574420:CDS 30.0%
AGTGTGAAAGTGAGAAACAA+GGG - chr4_1:77899999-77900018 None:intergenic 35.0%
CCTAAACGTAGTAACATGAT+AGG - chr4_1:77900188-77900207 None:intergenic 35.0%
CCTATCATGTTACTACGTTT+AGG + chr4_1:77900185-77900204 Msa0574420:CDS 35.0%
AGGAAGAGACAATGATTGTT+GGG - chr4_1:77900217-77900236 None:intergenic 35.0%
!! TTCTTATGGTTCTAAAGGTC+TGG + chr4_1:77900316-77900335 Msa0574420:CDS 35.0%
GATTGTGTATAAAATGGTGC+TGG + chr4_1:77900535-77900554 Msa0574420:CDS 35.0%
! TTGTGTATAAAATGGTGCTG+GGG + chr4_1:77900537-77900556 Msa0574420:CDS 35.0%
!! ATGAGGAGTTTGATTTGAAG+GGG + chr4_1:77900570-77900589 Msa0574420:CDS 35.0%
! GCTGATTATGTTCCTTTTCT+TGG + chr4_1:77900635-77900654 Msa0574420:CDS 35.0%
! TCTTGGAGTTTTTGATCTTC+AGG + chr4_1:77900652-77900671 Msa0574420:CDS 35.0%
TAGGTCATATAATCTACGAC+TGG - chr4_1:77900786-77900805 None:intergenic 35.0%
CAAGATAATAATGTACCTGG+TGG - chr4_1:77901093-77901112 None:intergenic 35.0%
CACCAGGTACATTATTATCT+TGG + chr4_1:77901091-77901110 Msa0574420:intron 35.0%
GTCCAAGATAATAATGTACC+TGG - chr4_1:77901096-77901115 None:intergenic 35.0%
! AACTCCTATGAAAAGTGTGA+GGG - chr4_1:77901159-77901178 None:intergenic 35.0%
! TAACTCCTATGAAAAGTGTG+AGG - chr4_1:77901160-77901179 None:intergenic 35.0%
! ATGCACGACATGAATCATTT+TGG + chr4_1:77901181-77901200 Msa0574420:intron 35.0%
! TGCACGACATGAATCATTTT+GGG + chr4_1:77901182-77901201 Msa0574420:intron 35.0%
TAAGCTATTCGGAAAGGTTA+TGG - chr4_1:77901334-77901353 None:intergenic 35.0%
TAACCTTTCCGAATAGCTTA+CGG + chr4_1:77901334-77901353 Msa0574420:intron 35.0%
!! ATCTTTTGTTATACTCCCTC+TGG + chr4_1:77901395-77901414 Msa0574420:intron 35.0%
TCATTGTAAATAGGACCAGA+GGG + chr4_1:77901539-77901558 Msa0574420:intron 35.0%
TTAACATGCGTATCCAATCA+TGG + chr4_1:77901602-77901621 Msa0574420:intron 35.0%
AGTTCACATGTGCAAAATGA+AGG + chr4_1:77901730-77901749 Msa0574420:CDS 35.0%
GTTCACATGTGCAAAATGAA+GGG + chr4_1:77901731-77901750 Msa0574420:CDS 35.0%
TGTTTGTTCGATCAATGACA+TGG - chr4_1:77901831-77901850 None:intergenic 35.0%
!! CTACATTATCTAGCTCTTGT+TGG - chr4_1:77901963-77901982 None:intergenic 35.0%
CAAGAGCTAGATAATGTAGT+TGG + chr4_1:77901964-77901983 Msa0574420:CDS 35.0%
AGTTGGGAAGAACAAATTAG+TGG + chr4_1:77901981-77902000 Msa0574420:CDS 35.0%
ACCTTAAGATTATATCCTGC+AGG + chr4_1:77902050-77902069 Msa0574420:intron 35.0%
TCCTGCAGGATATAATCTTA+AGG - chr4_1:77902054-77902073 None:intergenic 35.0%
!! TAGGGAGAGATTCTAAGATA+TGG + chr4_1:77902165-77902184 Msa0574420:CDS 35.0%
!! TAAACTTGTTGTAGCTCAGT+TGG + chr4_1:77902325-77902344 Msa0574420:CDS 35.0%
!! AGTTGGTACATTGCTTTTCT+TGG + chr4_1:77902342-77902361 Msa0574420:CDS 35.0%
! GCGATGAAGGAAACATGTTT+TGG - chr4_1:77899974-77899993 None:intergenic 40.0%
GAGTGTGAAAGTGAGAAACA+AGG - chr4_1:77900000-77900019 None:intergenic 40.0%
!!! TTTTAGGTTGTTTACGACGG+AGG - chr4_1:77900052-77900071 None:intergenic 40.0%
! ATTGGTAACCTCCACATGTT+GGG + chr4_1:77900116-77900135 Msa0574420:CDS 40.0%
! CAAGCCTTGTCCAAAAAACA+CGG + chr4_1:77900161-77900180 Msa0574420:CDS 40.0%
!!! CATGATAGGACCGTGTTTTT+TGG - chr4_1:77900174-77900193 None:intergenic 40.0%
GAGGAAGAGACAATGATTGT+TGG - chr4_1:77900218-77900237 None:intergenic 40.0%
! AAACGACGTCGTGTGTTTTA+AGG - chr4_1:77900259-77900278 None:intergenic 40.0%
GCCGCCCATTATATTTCTTA+TGG + chr4_1:77900302-77900321 Msa0574420:CDS 40.0%
ATATTGGCGTAACATGAGGA+AGG + chr4_1:77900358-77900377 Msa0574420:CDS 40.0%
! GAGGGAACTAAAATTGGCTT+TGG + chr4_1:77900439-77900458 Msa0574420:CDS 40.0%
TTGAAGAAAGCTGCGAGTTT+GGG + chr4_1:77900467-77900486 Msa0574420:CDS 40.0%
TTGAAGGGGCAAATTCAACA+AGG + chr4_1:77900584-77900603 Msa0574420:CDS 40.0%
TGAAGGGGCAAATTCAACAA+GGG + chr4_1:77900585-77900604 Msa0574420:CDS 40.0%
ACATATCTTGGTACTCCCTT+CGG - chr4_1:77900956-77900975 None:intergenic 40.0%
CTCTCTGTCACACATTATTG+CGG + chr4_1:77901062-77901081 Msa0574420:intron 40.0%
! TATGCCCTCACACTTTTCAT+AGG + chr4_1:77901152-77901171 Msa0574420:intron 40.0%
! GCACGACATGAATCATTTTG+GGG + chr4_1:77901183-77901202 Msa0574420:intron 40.0%
TTTCCGTAAGCTATTCGGAA+AGG - chr4_1:77901340-77901359 None:intergenic 40.0%
AGGTGTTTCCGTAAGCTATT+CGG - chr4_1:77901345-77901364 None:intergenic 40.0%
CTCATTGTAAATAGGACCAG+AGG + chr4_1:77901538-77901557 Msa0574420:intron 40.0%
CAAGAGAACTGCTAAAGCAA+TGG + chr4_1:77901669-77901688 Msa0574420:CDS 40.0%
TGGGAAGAACAAATTAGTGG+AGG + chr4_1:77901984-77902003 Msa0574420:CDS 40.0%
GTTTAACTGTAGCTAGTCCA+AGG - chr4_1:77902310-77902329 None:intergenic 40.0%
! TCATTTGGAGTCATACTCGA+GGG - chr4_1:77902374-77902393 None:intergenic 40.0%
! ATCATTTGGAGTCATACTCG+AGG - chr4_1:77902375-77902394 None:intergenic 40.0%
AGAAACAAGGGAAGCGATGA+AGG - chr4_1:77899987-77900006 None:intergenic 45.0%
TTGTTTACGACGGAGGAACA+AGG - chr4_1:77900045-77900064 None:intergenic 45.0%
ATGTGGAGGTTACCAATGAC+TGG - chr4_1:77900113-77900132 None:intergenic 45.0%
! CATTGGTAACCTCCACATGT+TGG + chr4_1:77900115-77900134 Msa0574420:CDS 45.0%
!!! CGTGTTTTTTGGACAAGGCT+TGG - chr4_1:77900163-77900182 None:intergenic 45.0%
!!! AGGACCGTGTTTTTTGGACA+AGG - chr4_1:77900168-77900187 None:intergenic 45.0%
!! TAATGGGCGGCTTCAAGTTT+TGG - chr4_1:77900293-77900312 None:intergenic 45.0%
!!! GGTCTGGTTTTCGCTGAATA+CGG + chr4_1:77900332-77900351 Msa0574420:CDS 45.0%
TCGCTGAATACGGAGCATAT+TGG + chr4_1:77900342-77900361 Msa0574420:CDS 45.0%
GAGCATATTGGCGTAACATG+AGG + chr4_1:77900354-77900373 Msa0574420:CDS 45.0%
TTGAATCGTTTGCGCCTTTG+AGG + chr4_1:77900414-77900433 Msa0574420:CDS 45.0%
! TTTAGTTCCCTCTGCCTCAA+AGG - chr4_1:77900431-77900450 None:intergenic 45.0%
GAGGCAGAGGGAACTAAAAT+TGG + chr4_1:77900433-77900452 Msa0574420:CDS 45.0%
CAAACTCGCAGCTTTCTTCA+AGG - chr4_1:77900468-77900487 None:intergenic 45.0%
CTTGAAGAAAGCTGCGAGTT+TGG + chr4_1:77900466-77900485 Msa0574420:CDS 45.0%
CAACAAGGGATGGAACTTTC+TGG + chr4_1:77900599-77900618 Msa0574420:CDS 45.0%
ATTATTGCGGTATTGCCACC+AGG + chr4_1:77901075-77901094 Msa0574420:intron 45.0%
GTGTTATGTTCTACTCCCTC+TGG - chr4_1:77901557-77901576 None:intergenic 45.0%
!! ACATGGCTTTGTTCGTCAGA+GGG - chr4_1:77901814-77901833 None:intergenic 45.0%
TGACACTTCTGCAACCATTG+TGG + chr4_1:77901888-77901907 Msa0574420:CDS 45.0%
TTCTGCAACCATTGTGGAGT+GGG + chr4_1:77901894-77901913 Msa0574420:CDS 45.0%
ACCATCAACTGTAGCATCCT+CGG - chr4_1:77902099-77902118 None:intergenic 45.0%
CCTCTTCGACCAAAACCAAA+TGG - chr4_1:77902272-77902291 None:intergenic 45.0%
!!! CCATTTGGTTTTGGTCGAAG+AGG + chr4_1:77902269-77902288 Msa0574420:CDS 45.0%
GGATGTCCTGGAATAAACCT+TGG + chr4_1:77902290-77902309 Msa0574420:CDS 45.0%
GCTAGTCCAAGGTTTATTCC+AGG - chr4_1:77902299-77902318 None:intergenic 45.0%
!! CAAGCAAGTGTTTGGCTCTT+GGG - chr4_1:77902430-77902449 None:intergenic 45.0%
TGCCAACATATCGCCTTCAT+GGG + chr4_1:77902453-77902472 Msa0574420:CDS 45.0%
TTCCCATGAAGGCGATATGT+TGG - chr4_1:77902458-77902477 None:intergenic 45.0%
ACGGAGGAACAAGGTGATGA+CGG - chr4_1:77900036-77900055 None:intergenic 50.0%
AAGGAATTGTTCAGCGGCTG+AGG - chr4_1:77900240-77900259 None:intergenic 50.0%
GATGTGAGCGAGTTTGTGCA+TGG + chr4_1:77900500-77900519 Msa0574420:CDS 50.0%
GCTGGGGTGTAGTGTTTATG+AGG + chr4_1:77900553-77900572 Msa0574420:CDS 50.0%
GGGGCAAATTCAACAAGGGA+TGG + chr4_1:77900589-77900608 Msa0574420:CDS 50.0%
!! GACATGGCTTTGTTCGTCAG+AGG - chr4_1:77901815-77901834 None:intergenic 50.0%
AGCCTTAGACATGATTGCCG+CGG + chr4_1:77901861-77901880 Msa0574420:CDS 50.0%
!! TGCAGAAGTGTCAAATGCCG+CGG - chr4_1:77901881-77901900 None:intergenic 50.0%
CTTCTGCAACCATTGTGGAG+TGG + chr4_1:77901893-77901912 Msa0574420:CDS 50.0%
GGATAAAGCCCACTCCACAA+TGG - chr4_1:77901905-77901924 None:intergenic 50.0%
TCTTGGATGCCTCATGAGCT+CGG - chr4_1:77901926-77901945 None:intergenic 50.0%
ACCGAGGATGCTACAGTTGA+TGG + chr4_1:77902095-77902114 Msa0574420:CDS 50.0%
TTTGGTCGAAGAGGATGTCC+TGG + chr4_1:77902278-77902297 Msa0574420:CDS 50.0%
!! GCAAGCAAGTGTTTGGCTCT+TGG - chr4_1:77902431-77902450 None:intergenic 50.0%
TGGCACAGCAAGCAAGTGTT+TGG - chr4_1:77902438-77902457 None:intergenic 50.0%
GTGCCAACATATCGCCTTCA+TGG + chr4_1:77902452-77902471 Msa0574420:CDS 50.0%
AATGATCGGAGACACCCACC+AGG + chr4_1:77900074-77900093 Msa0574420:CDS 55.0%
GAATTGTTCAGCGGCTGAGG+AGG - chr4_1:77900237-77900256 None:intergenic 55.0%
!!! GGCGGCTTCAAGTTTTGGAC+GGG - chr4_1:77900288-77900307 None:intergenic 55.0%
!!! GGGCGGCTTCAAGTTTTGGA+CGG - chr4_1:77900289-77900308 None:intergenic 55.0%
!! GTTTGCGCCTTTGAGGCAGA+GGG + chr4_1:77900421-77900440 Msa0574420:CDS 55.0%
GAAAGCTGCGAGTTTGGGTG+AGG + chr4_1:77900472-77900491 Msa0574420:CDS 55.0%
TGCCGCGGCAATCATGTCTA+AGG - chr4_1:77901866-77901885 None:intergenic 55.0%
! GGGCTTTATCCGAGCTCATG+AGG + chr4_1:77901914-77901933 Msa0574420:CDS 55.0%
CCAATGACTGGATAGCCCCG+TGG - chr4_1:77900101-77900120 None:intergenic 60.0%
CCACGGGGCTATCCAGTCAT+TGG + chr4_1:77900098-77900117 Msa0574420:CDS 60.0%
!! GGAGGGTACCCAACATGTGG+AGG - chr4_1:77900127-77900146 None:intergenic 60.0%
!! GTGGGAGGGTACCCAACATG+TGG - chr4_1:77900130-77900149 None:intergenic 60.0%
TGGACAAGGCTTGGAGTGCG+CGG - chr4_1:77900154-77900173 None:intergenic 60.0%
!! CGTTTGCGCCTTTGAGGCAG+AGG + chr4_1:77900420-77900439 Msa0574420:CDS 60.0%
CGTCAGAGGGATCGATCGTC+TGG - chr4_1:77901801-77901820 None:intergenic 60.0%
GGAGACACCCACCAGGTCCA+CGG + chr4_1:77900081-77900100 Msa0574420:CDS 65.0%
GAGACACCCACCAGGTCCAC+GGG + chr4_1:77900082-77900101 Msa0574420:CDS 65.0%
AGACACCCACCAGGTCCACG+GGG + chr4_1:77900083-77900102 Msa0574420:CDS 65.0%
GATAGCCCCGTGGACCTGGT+GGG - chr4_1:77900091-77900110 None:intergenic 65.0%
ACTGGATAGCCCCGTGGACC+TGG - chr4_1:77900095-77900114 None:intergenic 65.0%
TTGGAGTGCGCGGTGTGGGA+GGG - chr4_1:77900144-77900163 None:intergenic 65.0%
AGGCTTGGAGTGCGCGGTGT+GGG - chr4_1:77900148-77900167 None:intergenic 65.0%
AAGGCTTGGAGTGCGCGGTG+TGG - chr4_1:77900149-77900168 None:intergenic 65.0%
!! GTTGACTCGCGCGGCACAAG+TGG - chr4_1:77902077-77902096 None:intergenic 65.0%
!! GCATCCTCGGTTGACTCGCG+CGG - chr4_1:77902086-77902105 None:intergenic 65.0%
GGATAGCCCCGTGGACCTGG+TGG - chr4_1:77900092-77900111 None:intergenic 70.0%
CTTGGAGTGCGCGGTGTGGG+AGG - chr4_1:77900145-77900164 None:intergenic 70.0%
CGCGGCACAAGTGGTCCTGC+AGG - chr4_1:77902068-77902087 None:intergenic 70.0%
TGTGCCGCGCGAGTCAACCG+AGG + chr4_1:77902079-77902098 Msa0574420:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 77899944 77902487 77899944 ID=Msa0574420;Name=Msa0574420
chr4_1 mRNA 77899944 77902487 77899944 ID=Msa0574420-mRNA-1;Parent=Msa0574420;Name=Msa0574420-mRNA-1;_AED=0.29;_eAED=0.29;_QI=34|0.5|0.33|1|1|1|3|0|495
chr4_1 exon 77899944 77900673 77899944 ID=Msa0574420-mRNA-1:exon:27557;Parent=Msa0574420-mRNA-1
chr4_1 exon 77901652 77902027 77901652 ID=Msa0574420-mRNA-1:exon:27558;Parent=Msa0574420-mRNA-1
chr4_1 exon 77902072 77902487 77902072 ID=Msa0574420-mRNA-1:exon:27559;Parent=Msa0574420-mRNA-1
chr4_1 five_prime_UTR 77899944 77899977 77899944 ID=Msa0574420-mRNA-1:five_prime_utr;Parent=Msa0574420-mRNA-1
chr4_1 CDS 77899978 77900673 77899978 ID=Msa0574420-mRNA-1:cds;Parent=Msa0574420-mRNA-1
chr4_1 CDS 77901652 77902027 77901652 ID=Msa0574420-mRNA-1:cds;Parent=Msa0574420-mRNA-1
chr4_1 CDS 77902072 77902487 77902072 ID=Msa0574420-mRNA-1:cds;Parent=Msa0574420-mRNA-1
Gene Sequence

>Msa0574420

ATGTTTCCTTCATCGCTTCCCTTGTTTCTCACTTTCACACTCATCTTCATTCTCTCCGTCATCACCTTGTTCCTCCGTCGTAAACAACCTAAAAATAATGATCGGAGACACCCACCAGGTCCACGGGGCTATCCAGTCATTGGTAACCTCCACATGTTGGGTACCCTCCCACACCGCGCACTCCAAGCCTTGTCCAAAAAACACGGTCCTATCATGTTACTACGTTTAGGACAAGTCCCAACAATCATTGTCTCTTCCTCCTCAGCCGCTGAACAATTCCTTAAAACACACGACGTCGTTTTCTCTTCCCGTCCAAAACTTGAAGCCGCCCATTATATTTCTTATGGTTCTAAAGGTCTGGTTTTCGCTGAATACGGAGCATATTGGCGTAACATGAGGAAGGTTTGTACTCTGCAGCTTTTGAGTGCTTCTAAAGTTGAATCGTTTGCGCCTTTGAGGCAGAGGGAACTAAAATTGGCTTTGGAATCCTTGAAGAAAGCTGCGAGTTTGGGTGAGGTTGTTGATGTGAGCGAGTTTGTGCATGGTGTTATAGCAGAGATTGTGTATAAAATGGTGCTGGGGTGTAGTGTTTATGAGGAGTTTGATTTGAAGGGGCAAATTCAACAAGGGATGGAACTTTCTGGCGCCTTTAATCTTGCTGATTATGTTCCTTTTCTTGGAGTTTTTGATCTTCAGGGATTAAAAAGAAGGTACAAGAGAACTGCTAAAGCAATGGACCAAGTGTTTGAGAAGATAATTAAGGAACGTGAACAAAGTTCACATGTGCAAAATGAAGGGCAGAAACACAAGAACTTCATAGACATTCTACTCTCATTGATGCACCAGACGATCGATCCCTCTGACGAACAAAGCCATGTCATTGATCGAACAAACATAAAGGCTATAGCCTTAGACATGATTGCCGCGGCATTTGACACTTCTGCAACCATTGTGGAGTGGGCTTTATCCGAGCTCATGAGGCATCCAAGAGTAATGAAAAATCTCCAACAAGAGCTAGATAATGTAGTTGGGAAGAACAAATTAGTGGAGGCGAATGATATGACAAAGTTAAGACCACTTGTGCCGCGCGAGTCAACCGAGGATGCTACAGTTGATGGTTATTTCATAAAGAAAAAAACAAGAGTAATTGTGAATTTATGGGCAATAGGGAGAGATTCTAAGATATGGTCTAATAATGCCGAAGAATTTTATCCAGAGAGATTTGTGGATAAAAATTTAGACTACCGTGGACATGATTTCCAATTTATACCATTTGGTTTTGGTCGAAGAGGATGTCCTGGAATAAACCTTGGACTAGCTACAGTTAAACTTGTTGTAGCTCAGTTGGTACATTGCTTTTCTTGGAAGCTTCCCTCGAGTATGACTCCAAATGATTTAGACATGACTGAAAAGTTTGGTCTCTCAATCCCAAGAGCCAAACACTTGCTTGCTGTGCCAACATATCGCCTTCATGGGAATGCAACATGA
Protein sequence

>Msa0574420

MFPSSLPLFLTFTLIFILSVITLFLRRKQPKNNDRRHPPGPRGYPVIGNLHMLGTLPHRALQALSKKHGPIMLLRLGQVPTIIVSSSSAAEQFLKTHDVVFSSRPKLEAAHYISYGSKGLVFAEYGAYWRNMRKVCTLQLLSASKVESFAPLRQRELKLALESLKKAASLGEVVDVSEFVHGVIAEIVYKMVLGCSVYEEFDLKGQIQQGMELSGAFNLADYVPFLGVFDLQGLKRRYKRTAKAMDQVFEKIIKEREQSSHVQNEGQKHKNFIDILLSLMHQTIDPSDEQSHVIDRTNIKAIALDMIAAAFDTSATIVEWALSELMRHPRVMKNLQQELDNVVGKNKLVEANDMTKLRPLVPRESTEDATVDGYFIKKKTRVIVNLWAIGRDSKIWSNNAEEFYPERFVDKNLDYRGHDFQFIPFGFGRRGCPGINLGLATVKLVVAQLVHCFSWKLPSSMTPNDLDMTEKFGLSIPRAKHLLAVPTYRLHGNAT*