Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442200 | A2Q224 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 626 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1442200 | -0.802634 | 5.112551e-49 | -8.615850e-47 |
| Msa0013270 | Msa1442200 | 0.807681 | 4.489144e-50 | -8.615850e-47 |
| Msa0027020 | Msa1442200 | -0.800343 | 1.506748e-48 | -8.615850e-47 |
| Msa0042520 | Msa1442200 | -0.801550 | 8.540379e-49 | -8.615850e-47 |
| Msa0047660 | Msa1442200 | -0.810734 | 9.946117e-51 | -8.615850e-47 |
| Msa0051910 | Msa1442200 | 0.807534 | 4.823002e-50 | -8.615850e-47 |
| Msa0062190 | Msa1442200 | 0.802602 | 5.190202e-49 | -8.615850e-47 |
| Msa0107830 | Msa1442200 | 0.801741 | 7.804034e-49 | -8.615850e-47 |
| Msa0111780 | Msa1442200 | 0.819198 | 1.317340e-52 | -8.615850e-47 |
| Msa0117650 | Msa1442200 | 0.817878 | 2.623616e-52 | -8.615850e-47 |
| Msa1344450 | Msa1442200 | 0.812567 | 3.972213e-51 | -8.615850e-47 |
| Msa1356100 | Msa1442200 | -0.805753 | 1.146329e-49 | -8.615850e-47 |
| Msa1357570 | Msa1442200 | 0.806397 | 8.392684e-50 | -8.615850e-47 |
| Msa1361980 | Msa1442200 | 0.800137 | 1.659673e-48 | -8.615850e-47 |
| Msa1381300 | Msa1442200 | -0.805490 | 1.302041e-49 | -8.615850e-47 |
| Msa1388720 | Msa1442200 | -0.802533 | 5.362845e-49 | -8.615850e-47 |
| Msa1408230 | Msa1442200 | -0.807044 | 6.126168e-50 | -8.615850e-47 |
| Msa1415510 | Msa1442200 | -0.802558 | 5.300507e-49 | -8.615850e-47 |
| Msa1420540 | Msa1442200 | 0.818581 | 1.819583e-52 | -8.615850e-47 |
| Msa1430950 | Msa1442200 | 0.806222 | 9.133079e-50 | -8.615850e-47 |
| Msa1442200 | Msa1451200 | -0.810722 | 1.000878e-50 | -8.615850e-47 |
| Msa1442200 | Msa1455360 | 0.800774 | 1.230831e-48 | -8.615850e-47 |
| Msa1442200 | Msa1462610 | 0.816306 | 5.920662e-52 | -8.615850e-47 |
| Msa0603300 | Msa1442200 | 0.801465 | 8.891725e-49 | -8.615850e-47 |
| Msa0603310 | Msa1442200 | 0.823906 | 1.076304e-53 | -8.615850e-47 |
| Msa0613300 | Msa1442200 | 0.801643 | 8.172259e-49 | -8.615850e-47 |
| Msa0619030 | Msa1442200 | -0.845532 | 3.829016e-59 | -8.615850e-47 |
| Msa0629160 | Msa1442200 | 0.807391 | 5.171889e-50 | -8.615850e-47 |
| Msa0638300 | Msa1442200 | -0.801131 | 1.040532e-48 | -8.615850e-47 |
| Msa0644340 | Msa1442200 | 0.821856 | 3.232557e-53 | -8.615850e-47 |
| Msa0647300 | Msa1442200 | 0.805967 | 1.033659e-49 | -8.615850e-47 |
| Msa0655370 | Msa1442200 | 0.815794 | 7.701955e-52 | -8.615850e-47 |
| Msa0673620 | Msa1442200 | -0.814919 | 1.205755e-51 | -8.615850e-47 |
| Msa0677250 | Msa1442200 | -0.806328 | 8.675528e-50 | -8.615850e-47 |
| Msa0679220 | Msa1442200 | 0.815175 | 1.057809e-51 | -8.615850e-47 |
| Msa0682110 | Msa1442200 | 0.802163 | 6.390344e-49 | -8.615850e-47 |
| Msa0682160 | Msa1442200 | 0.809378 | 1.948711e-50 | -8.615850e-47 |
| Msa0685390 | Msa1442200 | -0.817244 | 3.646338e-52 | -8.615850e-47 |
| Msa0686830 | Msa1442200 | 0.810419 | 1.163388e-50 | -8.615850e-47 |
| Msa0695250 | Msa1442200 | -0.809564 | 1.777803e-50 | -8.615850e-47 |
| Msa0699170 | Msa1442200 | 0.805208 | 1.491237e-49 | -8.615850e-47 |
| Msa0714230 | Msa1442200 | -0.826086 | 3.290303e-54 | -8.615850e-47 |
| Msa0731580 | Msa1442200 | 0.804151 | 2.479328e-49 | -8.615850e-47 |
| Msa0743370 | Msa1442200 | 0.825806 | 3.835415e-54 | -8.615850e-47 |
| Msa0744710 | Msa1442200 | 0.847312 | 1.252282e-59 | -8.615850e-47 |
| Msa0766170 | Msa1442200 | 0.809912 | 1.496228e-50 | -8.615850e-47 |
| Msa0792410 | Msa1442200 | 0.818128 | 2.304053e-52 | -8.615850e-47 |
| Msa0795910 | Msa1442200 | -0.808878 | 2.494503e-50 | -8.615850e-47 |
| Msa0800150 | Msa1442200 | 0.809847 | 1.545701e-50 | -8.615850e-47 |
| Msa0814660 | Msa1442200 | 0.817613 | 3.011612e-52 | -8.615850e-47 |
| Msa0826240 | Msa1442200 | 0.845233 | 4.615296e-59 | -8.615850e-47 |
| Msa0829250 | Msa1442200 | -0.805965 | 1.034627e-49 | -8.615850e-47 |
| Msa0829990 | Msa1442200 | 0.807145 | 5.830468e-50 | -8.615850e-47 |
| Msa0833360 | Msa1442200 | -0.806126 | 9.567885e-50 | -8.615850e-47 |
| Msa0125860 | Msa1442200 | 0.800462 | 1.425052e-48 | -8.615850e-47 |
| Msa0127350 | Msa1442200 | -0.802183 | 6.330846e-49 | -8.615850e-47 |
| Msa0145050 | Msa1442200 | 0.843461 | 1.381461e-58 | -8.615850e-47 |
| Msa0175240 | Msa1442200 | -0.804771 | 1.841006e-49 | -8.615850e-47 |
| Msa0186400 | Msa1442200 | -0.802225 | 6.206494e-49 | -8.615850e-47 |
| Msa0193950 | Msa1442200 | 0.804906 | 1.725299e-49 | -8.615850e-47 |
| Msa0211460 | Msa1442200 | 0.800671 | 1.291878e-48 | -8.615850e-47 |
| Msa1235620 | Msa1442200 | -0.802762 | 4.810262e-49 | -8.615850e-47 |
| Msa1239940 | Msa1442200 | 0.810329 | 1.217093e-50 | -8.615850e-47 |
| Msa1240490 | Msa1442200 | 0.813296 | 2.749705e-51 | -8.615850e-47 |
| Msa1254870 | Msa1442200 | 0.813561 | 2.404492e-51 | -8.615850e-47 |
| Msa1256490 | Msa1442200 | -0.802811 | 4.699097e-49 | -8.615850e-47 |
| Msa1263110 | Msa1442200 | 0.813885 | 2.041034e-51 | -8.615850e-47 |
| Msa1263370 | Msa1442200 | 0.808547 | 2.935649e-50 | -8.615850e-47 |
| Msa1263520 | Msa1442200 | 0.800695 | 1.277211e-48 | -8.615850e-47 |
| Msa1273320 | Msa1442200 | 0.837124 | 6.255653e-57 | -8.615850e-47 |
| Msa1279200 | Msa1442200 | -0.814950 | 1.186723e-51 | -8.615850e-47 |
| Msa1281780 | Msa1442200 | 0.828347 | 9.457463e-55 | -8.615850e-47 |
| Msa1287100 | Msa1442200 | -0.833337 | 5.652532e-56 | -8.615850e-47 |
| Msa1295210 | Msa1442200 | -0.820777 | 5.734693e-53 | -8.615850e-47 |
| Msa1296810 | Msa1442200 | -0.800756 | 1.241603e-48 | -8.615850e-47 |
| Msa1316960 | Msa1442200 | 0.805151 | 1.533292e-49 | -8.615850e-47 |
| Msa1317740 | Msa1442200 | 0.832946 | 7.069357e-56 | -8.615850e-47 |
| Msa1321010 | Msa1442200 | 0.807975 | 3.886727e-50 | -8.615850e-47 |
| Msa1328430 | Msa1442200 | 0.816561 | 5.190589e-52 | -8.615850e-47 |
| Msa1328680 | Msa1442200 | -0.826202 | 3.088066e-54 | -8.615850e-47 |
| Msa1342360 | Msa1442200 | -0.803291 | 3.739765e-49 | -8.615850e-47 |
| Msa0383770 | Msa1442200 | 0.803432 | 3.495829e-49 | -8.615850e-47 |
| Msa0386230 | Msa1442200 | -0.801022 | 1.095566e-48 | -8.615850e-47 |
| Msa0396880 | Msa1442200 | 0.812903 | 3.354380e-51 | -8.615850e-47 |
| Msa0403740 | Msa1442200 | -0.809766 | 1.608866e-50 | -8.615850e-47 |
| Msa0412580 | Msa1442200 | -0.811538 | 6.660656e-51 | -8.615850e-47 |
| Msa0456450 | Msa1442200 | -0.802601 | 5.193437e-49 | -8.615850e-47 |
| Msa0457070 | Msa1442200 | -0.800208 | 1.605294e-48 | -8.615850e-47 |
| Msa0459930 | Msa1442200 | 0.805554 | 1.262447e-49 | -8.615850e-47 |
| Msa0469770 | Msa1442200 | -0.812655 | 3.801252e-51 | -8.615850e-47 |
| Msa0474660 | Msa1442200 | -0.804201 | 2.420469e-49 | -8.615850e-47 |
| Msa1007900 | Msa1442200 | 0.831883 | 1.296658e-55 | -8.615850e-47 |
| Msa1035050 | Msa1442200 | 0.800736 | 1.252803e-48 | -8.615850e-47 |
| Msa1039150 | Msa1442200 | -0.809390 | 1.937505e-50 | -8.615850e-47 |
| Msa1058550 | Msa1442200 | -0.821831 | 3.275095e-53 | -8.615850e-47 |
| Msa1062060 | Msa1442200 | 0.818758 | 1.658412e-52 | -8.615850e-47 |
| Msa1075090 | Msa1442200 | 0.800249 | 1.574603e-48 | -8.615850e-47 |
| Msa1080820 | Msa1442200 | 0.831002 | 2.136376e-55 | -8.615850e-47 |
| Msa1082640 | Msa1442200 | -0.800748 | 1.246025e-48 | -8.615850e-47 |
| Msa1083660 | Msa1442200 | -0.805147 | 1.536340e-49 | -8.615850e-47 |
| Msa1094810 | Msa1442200 | 0.801824 | 7.504675e-49 | -8.615850e-47 |
| Msa1103450 | Msa1442200 | 0.824863 | 6.408596e-54 | -8.615850e-47 |
| Msa0253230 | Msa1442200 | -0.804956 | 1.683915e-49 | -8.615850e-47 |
| Msa0275390 | Msa1442200 | 0.998840 | 1.278239e-278 | -8.615850e-47 |
| Msa0307630 | Msa1442200 | 0.816085 | 6.631385e-52 | -8.615850e-47 |
| Msa0307740 | Msa1442200 | 0.805073 | 1.591845e-49 | -8.615850e-47 |
| Msa0340370 | Msa1442200 | 0.811540 | 6.652176e-51 | -8.615850e-47 |
| Msa0340700 | Msa1442200 | -0.803005 | 4.284399e-49 | -8.615850e-47 |
| Msa0345890 | Msa1442200 | 0.801066 | 1.073050e-48 | -8.615850e-47 |
| Msa0354600 | Msa1442200 | 0.815168 | 1.061295e-51 | -8.615850e-47 |
| Msa0364030 | Msa1442200 | -0.809486 | 1.847358e-50 | -8.615850e-47 |
| Msa1107220 | Msa1442200 | 0.839907 | 1.196666e-57 | -8.615850e-47 |
| Msa1118960 | Msa1442200 | 0.831151 | 1.963677e-55 | -8.615850e-47 |
| Msa1121720 | Msa1442200 | -0.805323 | 1.410968e-49 | -8.615850e-47 |
| Msa1129120 | Msa1442200 | -0.803118 | 4.059893e-49 | -8.615850e-47 |
| Msa1130150 | Msa1442200 | -0.805648 | 1.205832e-49 | -8.615850e-47 |
| Msa1132250 | Msa1442200 | -0.804837 | 1.783296e-49 | -8.615850e-47 |
| Msa1132880 | Msa1442200 | -0.809350 | 1.976465e-50 | -8.615850e-47 |
| Msa1136690 | Msa1442200 | 0.815634 | 8.362759e-52 | -8.615850e-47 |
| Msa1137750 | Msa1442200 | 0.821869 | 3.209064e-53 | -8.615850e-47 |
| Msa1150760 | Msa1442200 | 0.821023 | 5.031496e-53 | -8.615850e-47 |
| Msa1156100 | Msa1442200 | -0.823127 | 1.637442e-53 | -8.615850e-47 |
| Msa1174280 | Msa1442200 | 0.805844 | 1.097130e-49 | -8.615850e-47 |
| Msa1177650 | Msa1442200 | 0.821618 | 3.668401e-53 | -8.615850e-47 |
| Msa1191270 | Msa1442200 | 0.812257 | 4.644320e-51 | -8.615850e-47 |
| Msa1191530 | Msa1442200 | -0.807419 | 5.101497e-50 | -8.615850e-47 |
| Msa1199540 | Msa1442200 | -0.821005 | 5.082224e-53 | -8.615850e-47 |
| Msa1202110 | Msa1442200 | 0.814128 | 1.803553e-51 | -8.615850e-47 |
| Msa1204870 | Msa1442200 | -0.812148 | 4.904728e-51 | -8.615850e-47 |
| Msa1204900 | Msa1442200 | -0.802640 | 5.098141e-49 | -8.615850e-47 |
| Msa1221270 | Msa1442200 | 0.809820 | 1.566666e-50 | -8.615850e-47 |
| Msa1223540 | Msa1442200 | 0.801799 | 7.594106e-49 | -8.615850e-47 |
| Msa1223710 | Msa1442200 | 0.830934 | 2.219507e-55 | -8.615850e-47 |
| Msa1223960 | Msa1442200 | 0.812037 | 5.187077e-51 | -8.615850e-47 |
| Msa1223990 | Msa1442200 | 0.824717 | 6.937638e-54 | -8.615850e-47 |
| Msa0484590 | Msa1442200 | -0.810111 | 1.355628e-50 | -8.615850e-47 |
| Msa0525180 | Msa1442200 | -0.827133 | 1.850813e-54 | -8.615850e-47 |
| Msa0535400 | Msa1442200 | 0.806519 | 7.909965e-50 | -8.615850e-47 |
| Msa0548420 | Msa1442200 | 0.800618 | 1.324572e-48 | -8.615850e-47 |
| Msa0561830 | Msa1442200 | 0.821965 | 3.050154e-53 | -8.615850e-47 |
| Msa0569900 | Msa1442200 | 0.803925 | 2.762742e-49 | -8.615850e-47 |
| Msa0580410 | Msa1442200 | -0.808881 | 2.491048e-50 | -8.615850e-47 |
| Msa0580890 | Msa1442200 | -0.801472 | 8.858768e-49 | -8.615850e-47 |
| Msa0581350 | Msa1442200 | 0.812034 | 5.194815e-51 | -8.615850e-47 |
| Msa0850640 | Msa1442200 | 0.807756 | 4.327107e-50 | -8.615850e-47 |
| Msa0855260 | Msa1442200 | 0.801442 | 8.988756e-49 | -8.615850e-47 |
| Msa0882480 | Msa1442200 | -0.827311 | 1.678232e-54 | -8.615850e-47 |
| Msa0904590 | Msa1442200 | 0.830498 | 2.838511e-55 | -8.615850e-47 |
| Msa0925940 | Msa1442200 | 0.812570 | 3.966388e-51 | -8.615850e-47 |
| Msa0936630 | Msa1442200 | 0.829566 | 4.791081e-55 | -8.615850e-47 |
| Msa0945160 | Msa1442200 | -0.805425 | 1.343105e-49 | -8.615850e-47 |
| Msa0945890 | Msa1442200 | 0.800520 | 1.386938e-48 | -8.615850e-47 |
| Msa0964400 | Msa1442200 | -0.810388 | 1.181901e-50 | -8.615850e-47 |
| Msa0973850 | Msa1442200 | 0.802776 | 4.777798e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442200 | MtrunA17_Chr2g0287431 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 626 |
| Msa1442200 | MtrunA17_Chr1g0210731 | 53.465 | 303 | 132 | 7 | 6 | 301 | 3 | 303 | 2.01e-101 | 300 |
| Msa1442200 | MtrunA17_Chr1g0210721 | 44.257 | 296 | 153 | 3 | 1 | 292 | 1 | 288 | 1.55e-79 | 244 |
| Msa1442200 | MtrunA17_Chr4g0033971 | 36.131 | 274 | 153 | 7 | 1 | 262 | 1 | 264 | 6.51e-46 | 157 |
| Msa1442200 | MtrunA17_Chr8g0369411 | 31.061 | 264 | 159 | 8 | 1 | 251 | 1 | 254 | 1.28e-33 | 124 |
| Msa1442200 | MtrunA17_Chr5g0409571 | 26.007 | 273 | 190 | 5 | 1 | 268 | 1 | 266 | 1.00e-28 | 111 |
| Msa1442200 | MtrunA17_Chr8g0369401 | 34.459 | 148 | 81 | 4 | 124 | 269 | 29 | 162 | 9.38e-16 | 73.9 |
| Msa1442200 | MtrunA17_Chr7g0227861 | 26.087 | 184 | 125 | 3 | 129 | 301 | 106 | 289 | 8.28e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442200 | AT1G55230.1 | 59.596 | 297 | 116 | 3 | 1 | 295 | 1 | 295 | 2.45e-125 | 361 |
| Msa1442200 | AT1G55240.1 | 58.013 | 312 | 126 | 4 | 1 | 309 | 1 | 310 | 1.34e-121 | 352 |
| Msa1442200 | AT5G19870.1 | 57.762 | 277 | 115 | 2 | 1 | 276 | 1 | 276 | 9.94e-108 | 315 |
| Msa1442200 | AT1G49470.1 | 32.432 | 296 | 179 | 7 | 1 | 284 | 1 | 287 | 1.17e-40 | 144 |
| Msa1442200 | AT1G32127.2 | 31.064 | 235 | 146 | 6 | 1 | 227 | 1 | 227 | 1.19e-30 | 117 |
| Msa1442200 | AT1G32127.1 | 31.064 | 235 | 146 | 6 | 1 | 227 | 1 | 227 | 1.19e-30 | 117 |
Find 64 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTTCAACTACTATTT+TGG | 0.034802 | tig0029815:+8145 | Msa1442200:CDS |
| CCCAATATGTATAAAGCTTT+TGG | 0.160001 | tig0029815:-8561 | None:intergenic |
| AGGCTTGTGGCTTATGGTTA+TGG | 0.190736 | tig0029815:+8229 | Msa1442200:CDS |
| CTTTCTTAATACTAGGATTA+TGG | 0.209091 | tig0029815:+7700 | Msa1442200:CDS |
| CCCAAAAGCTTTATACATAT+TGG | 0.209116 | tig0029815:+8560 | Msa1442200:CDS |
| GTTGGTGAAATGTAGGAATT+TGG | 0.216265 | tig0029815:-7759 | None:intergenic |
| CTTATGTGCACCATAATATT+TGG | 0.264140 | tig0029815:-8438 | None:intergenic |
| CCAAAAGCTTTATACATATT+GGG | 0.302713 | tig0029815:+8561 | Msa1442200:CDS |
| GGCTTGTGGCTTATGGTTAT+GGG | 0.311665 | tig0029815:+8230 | Msa1442200:CDS |
| AGAAGATGGTATTGTCCTTC+TGG | 0.334093 | tig0029815:-8101 | None:intergenic |
| TGGAAGCTAGGAATTGTGTT+AGG | 0.349655 | tig0029815:-8022 | None:intergenic |
| TCGAAGGGTTGGTGTCGGTC+GGG | 0.358375 | tig0029815:-7873 | None:intergenic |
| TCATATATGGGCACTCTTGT+AGG | 0.360041 | tig0029815:+7657 | None:intergenic |
| CACCCTTTGGCAATTAAACT+TGG | 0.365074 | tig0029815:-8269 | None:intergenic |
| AAGGTTCGGTATTTCTCGTT+GGG | 0.382062 | tig0029815:+8458 | Msa1442200:CDS |
| AGAATTCATAAAACACCCTT+TGG | 0.389849 | tig0029815:-8282 | None:intergenic |
| TGGTTATGGGGTACATGCTT+TGG | 0.404676 | tig0029815:+8243 | Msa1442200:CDS |
| CTGTTGAGGCTAACATGATT+AGG | 0.407916 | tig0029815:-7821 | None:intergenic |
| TCCTACCTTTCCATGTCAAC+AGG | 0.409770 | tig0029815:-8599 | None:intergenic |
| ATCGAAGGGTTGGTGTCGGT+CGG | 0.417234 | tig0029815:-7874 | None:intergenic |
| CTCAACAGCTTCAATTTCAA+TGG | 0.417853 | tig0029815:+7836 | Msa1442200:CDS |
| CAAATATTATGGTGCACATA+AGG | 0.430454 | tig0029815:+8439 | Msa1442200:CDS |
| GTATTTCTCGTTGGGGATTG+AGG | 0.432650 | tig0029815:+8466 | Msa1442200:CDS |
| CGAAGGGTTGGTGTCGGTCG+GGG | 0.438020 | tig0029815:-7872 | None:intergenic |
| TCTCAAAAGGTAAGCTTAGT+TGG | 0.445230 | tig0029815:+8533 | Msa1442200:CDS |
| CGAACACGCTTTGATCTCCA+TGG | 0.460449 | tig0029815:+7935 | Msa1442200:CDS |
| AACTCTTTCACCTGTTGACA+TGG | 0.462093 | tig0029815:+8589 | Msa1442200:CDS |
| CAAGAACTTGCAAGAGAAGA+TGG | 0.478767 | tig0029815:-8115 | None:intergenic |
| CTTGTAGGACATGTAGCTCC+TGG | 0.486072 | tig0029815:+7672 | Msa1442200:CDS |
| GATTGTTCCGTCTGTATCGA+AGG | 0.490701 | tig0029815:-7889 | None:intergenic |
| GAAGTTGTGGAGATGATATG+AGG | 0.499668 | tig0029815:-7913 | None:intergenic |
| TTTGTCAAGGATTATGGAGG+AGG | 0.503244 | tig0029815:-7976 | None:intergenic |
| TGATGATGTGGAGTCTCAAA+AGG | 0.507045 | tig0029815:+8520 | Msa1442200:CDS |
| GGAGTTTGATGTGGTTGAAA+AGG | 0.511822 | tig0029815:-7725 | None:intergenic |
| TCAAAGCGTGTTCGAAGTTG+TGG | 0.514973 | tig0029815:-7926 | None:intergenic |
| TTCCGTCTGTATCGAAGGGT+TGG | 0.515452 | tig0029815:-7884 | None:intergenic |
| TAAGGTTCGGTATTTCTCGT+TGG | 0.519213 | tig0029815:+8457 | Msa1442200:CDS |
| GATTATGGAGGAGGCGGCGT+AGG | 0.527863 | tig0029815:-7967 | None:intergenic |
| CATTGAAATTGAAGCTGTTG+AGG | 0.531529 | tig0029815:-7835 | None:intergenic |
| ATTATGGTGCACATAAGGTT+CGG | 0.532464 | tig0029815:+8444 | Msa1442200:CDS |
| GGAAGCTAGGAATTGTGTTA+GGG | 0.534932 | tig0029815:-8021 | None:intergenic |
| GTCAAGGATTATGGAGGAGG+CGG | 0.536473 | tig0029815:-7973 | None:intergenic |
| CACCAAGTTTAATTGCCAAA+GGG | 0.536544 | tig0029815:+8267 | Msa1442200:CDS |
| TGTGATCAGCTGAATGAAGA+TGG | 0.541577 | tig0029815:-8073 | None:intergenic |
| TCTTCATTCAGCTGATCACA+TGG | 0.543097 | tig0029815:+8076 | Msa1442200:CDS |
| AAGTTGTGGAGATGATATGA+GGG | 0.547077 | tig0029815:-7912 | None:intergenic |
| TTTCACCTGTTGACATGGAA+AGG | 0.553004 | tig0029815:+8594 | Msa1442200:CDS |
| ACATGATTAGGTAAAGTTCA+AGG | 0.554269 | tig0029815:-7809 | None:intergenic |
| ACACCAAGTTTAATTGCCAA+AGG | 0.571150 | tig0029815:+8266 | Msa1442200:CDS |
| GCTTGTGGCTTATGGTTATG+GGG | 0.571244 | tig0029815:+8231 | Msa1442200:CDS |
| AGGTTCGGTATTTCTCGTTG+GGG | 0.572539 | tig0029815:+8459 | Msa1442200:CDS |
| ACCTGTTGACATGGAAAGGT+AGG | 0.574711 | tig0029815:+8598 | Msa1442200:CDS |
| ATTGTTCCGTCTGTATCGAA+GGG | 0.588747 | tig0029815:-7888 | None:intergenic |
| CTGTATCGAAGGGTTGGTGT+CGG | 0.591425 | tig0029815:-7878 | None:intergenic |
| GAACCATGTTGGTGAAATGT+AGG | 0.593760 | tig0029815:-7766 | None:intergenic |
| TGAAAAGTTAAGTGATGATG+TGG | 0.600534 | tig0029815:+8508 | Msa1442200:CDS |
| ATTCCTACATTTCACCAACA+TGG | 0.602217 | tig0029815:+7763 | Msa1442200:CDS |
| GCTGATCACATGGGACCAGA+AGG | 0.605989 | tig0029815:+8086 | Msa1442200:CDS |
| CACCAACCCTTCGATACAGA+CGG | 0.637019 | tig0029815:+7882 | Msa1442200:CDS |
| TTTGATGTTGAGAACCATGT+TGG | 0.643972 | tig0029815:-7777 | None:intergenic |
| AGTATTAAGAAAGCAAAACC+AGG | 0.657206 | tig0029815:-7690 | None:intergenic |
| CTTCATTCAGCTGATCACAT+GGG | 0.667757 | tig0029815:+8077 | Msa1442200:CDS |
| AGTTGTGGAGATGATATGAG+GGG | 0.675396 | tig0029815:-7911 | None:intergenic |
| GGCGTAGGTGAAGAAAGCCA+TGG | 0.698512 | tig0029815:-7952 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTAAGTATATTTTTTCA+AGG | + | tig0029815:8209-8228 | Msa1442200:CDS | 15.0% |
| !!! | TTGTTAATATTTTGTTTAGT+TGG | + | tig0029815:8366-8385 | Msa1442200:CDS | 15.0% |
| !!! | TCATTAAGTATATTTTTTCA+AGG | + | tig0029815:8209-8228 | Msa1442200:CDS | 15.0% |
| !!! | TTGTTAATATTTTGTTTAGT+TGG | + | tig0029815:8366-8385 | Msa1442200:CDS | 15.0% |
| !!! | AGGAATTTGGATTTTTAATA+TGG | - | tig0029815:7749-7768 | None:intergenic | 20.0% |
| !!! | TAATATTTTGTTTAGTTGGT+TGG | + | tig0029815:8370-8389 | Msa1442200:CDS | 20.0% |
| !!! | AGGAATTTGGATTTTTAATA+TGG | - | tig0029815:7749-7768 | None:intergenic | 20.0% |
| !!! | TAATATTTTGTTTAGTTGGT+TGG | + | tig0029815:8370-8389 | Msa1442200:CDS | 20.0% |
| ! | CTTTCTTAATACTAGGATTA+TGG | + | tig0029815:7700-7719 | Msa1442200:CDS | 25.0% |
| !! | TTTTAATATGGAGTTTGATG+TGG | - | tig0029815:7737-7756 | None:intergenic | 25.0% |
| !! | ATTTCAATGGAACTTTTCAT+CGG | + | tig0029815:7849-7868 | Msa1442200:CDS | 25.0% |
| !! | TCTCTTTCAACTACTATTTT+GGG | + | tig0029815:8146-8165 | Msa1442200:CDS | 25.0% |
| !!! | TGTTTTATGAATTCTGAAGA+AGG | + | tig0029815:8290-8309 | Msa1442200:CDS | 25.0% |
| ! | ATACAAAGAAACACCAAAAA+CGG | - | tig0029815:8408-8427 | None:intergenic | 25.0% |
| !!! | TTTTGGTGTTTCTTTGTATT+TGG | + | tig0029815:8409-8428 | Msa1442200:CDS | 25.0% |
| !!! | TTGGTTTTGACCAAATATTA+TGG | + | tig0029815:8428-8447 | Msa1442200:CDS | 25.0% |
| !! | CCAATATGTATAAAGCTTTT+GGG | - | tig0029815:8563-8582 | None:intergenic | 25.0% |
| !! | CCAAAAGCTTTATACATATT+GGG | + | tig0029815:8561-8580 | Msa1442200:CDS | 25.0% |
| ! | CTTTCTTAATACTAGGATTA+TGG | + | tig0029815:7700-7719 | Msa1442200:CDS | 25.0% |
| !! | TTTTAATATGGAGTTTGATG+TGG | - | tig0029815:7737-7756 | None:intergenic | 25.0% |
| !! | ATTTCAATGGAACTTTTCAT+CGG | + | tig0029815:7849-7868 | Msa1442200:CDS | 25.0% |
| !! | TCTCTTTCAACTACTATTTT+GGG | + | tig0029815:8146-8165 | Msa1442200:CDS | 25.0% |
| !!! | TGTTTTATGAATTCTGAAGA+AGG | + | tig0029815:8290-8309 | Msa1442200:CDS | 25.0% |
| ! | ATACAAAGAAACACCAAAAA+CGG | - | tig0029815:8408-8427 | None:intergenic | 25.0% |
| !!! | TTTTGGTGTTTCTTTGTATT+TGG | + | tig0029815:8409-8428 | Msa1442200:CDS | 25.0% |
| !!! | TTGGTTTTGACCAAATATTA+TGG | + | tig0029815:8428-8447 | Msa1442200:CDS | 25.0% |
| !! | CCAATATGTATAAAGCTTTT+GGG | - | tig0029815:8563-8582 | None:intergenic | 25.0% |
| !! | CCAAAAGCTTTATACATATT+GGG | + | tig0029815:8561-8580 | Msa1442200:CDS | 25.0% |
| AGTATTAAGAAAGCAAAACC+AGG | - | tig0029815:7693-7712 | None:intergenic | 30.0% | |
| ! | GGTTTTGCTTTCTTAATACT+AGG | + | tig0029815:7693-7712 | Msa1442200:CDS | 30.0% |
| ACATGATTAGGTAAAGTTCA+AGG | - | tig0029815:7812-7831 | None:intergenic | 30.0% | |
| ! | TTCGATTTTGTCAAGGATTA+TGG | - | tig0029815:7985-8004 | None:intergenic | 30.0% |
| AAGCTGTTGAAAAAAAGCTA+TGG | - | tig0029815:8045-8064 | None:intergenic | 30.0% | |
| ! | CTCTCTTTCAACTACTATTT+TGG | + | tig0029815:8145-8164 | Msa1442200:CDS | 30.0% |
| !!! | GTATATTTTTTCAAGGCTTG+TGG | + | tig0029815:8216-8235 | Msa1442200:CDS | 30.0% |
| AGAATTCATAAAACACCCTT+TGG | - | tig0029815:8285-8304 | None:intergenic | 30.0% | |
| CTTATGTGCACCATAATATT+TGG | - | tig0029815:8441-8460 | None:intergenic | 30.0% | |
| CAAATATTATGGTGCACATA+AGG | + | tig0029815:8439-8458 | Msa1442200:CDS | 30.0% | |
| ! | TGAAAAGTTAAGTGATGATG+TGG | + | tig0029815:8508-8527 | Msa1442200:CDS | 30.0% |
| ! | CCCAAAAGCTTTATACATAT+TGG | + | tig0029815:8560-8579 | Msa1442200:CDS | 30.0% |
| ! | CCCAATATGTATAAAGCTTT+TGG | - | tig0029815:8564-8583 | None:intergenic | 30.0% |
| AGTATTAAGAAAGCAAAACC+AGG | - | tig0029815:7693-7712 | None:intergenic | 30.0% | |
| ! | GGTTTTGCTTTCTTAATACT+AGG | + | tig0029815:7693-7712 | Msa1442200:CDS | 30.0% |
| ACATGATTAGGTAAAGTTCA+AGG | - | tig0029815:7812-7831 | None:intergenic | 30.0% | |
| ! | TTCGATTTTGTCAAGGATTA+TGG | - | tig0029815:7985-8004 | None:intergenic | 30.0% |
| AAGCTGTTGAAAAAAAGCTA+TGG | - | tig0029815:8045-8064 | None:intergenic | 30.0% | |
| ! | CTCTCTTTCAACTACTATTT+TGG | + | tig0029815:8145-8164 | Msa1442200:CDS | 30.0% |
| !!! | GTATATTTTTTCAAGGCTTG+TGG | + | tig0029815:8216-8235 | Msa1442200:CDS | 30.0% |
| AGAATTCATAAAACACCCTT+TGG | - | tig0029815:8285-8304 | None:intergenic | 30.0% | |
| CTTATGTGCACCATAATATT+TGG | - | tig0029815:8441-8460 | None:intergenic | 30.0% | |
| CAAATATTATGGTGCACATA+AGG | + | tig0029815:8439-8458 | Msa1442200:CDS | 30.0% | |
| ! | TGAAAAGTTAAGTGATGATG+TGG | + | tig0029815:8508-8527 | Msa1442200:CDS | 30.0% |
| ! | CCCAAAAGCTTTATACATAT+TGG | + | tig0029815:8560-8579 | Msa1442200:CDS | 30.0% |
| ! | CCCAATATGTATAAAGCTTT+TGG | - | tig0029815:8564-8583 | None:intergenic | 30.0% |
| ! | GTTGGTGAAATGTAGGAATT+TGG | - | tig0029815:7762-7781 | None:intergenic | 35.0% |
| ATTCCTACATTTCACCAACA+TGG | + | tig0029815:7763-7782 | Msa1442200:CDS | 35.0% | |
| TTTGATGTTGAGAACCATGT+TGG | - | tig0029815:7780-7799 | None:intergenic | 35.0% | |
| CATTGAAATTGAAGCTGTTG+AGG | - | tig0029815:7838-7857 | None:intergenic | 35.0% | |
| CTCAACAGCTTCAATTTCAA+TGG | + | tig0029815:7836-7855 | Msa1442200:CDS | 35.0% | |
| AAGTTGTGGAGATGATATGA+GGG | - | tig0029815:7915-7934 | None:intergenic | 35.0% | |
| ! | GATTTTGTCAAGGATTATGG+AGG | - | tig0029815:7982-8001 | None:intergenic | 35.0% |
| !! | CTTGGTTTTCGATTTTGTCA+AGG | - | tig0029815:7992-8011 | None:intergenic | 35.0% |
| GAAAAAAAGCTATGGAAGCT+AGG | - | tig0029815:8037-8056 | None:intergenic | 35.0% | |
| !!! | ACCAAGAAGCTTTTTTGCAT+GGG | - | tig0029815:8176-8195 | None:intergenic | 35.0% |
| ACACCAAGTTTAATTGCCAA+AGG | + | tig0029815:8266-8285 | Msa1442200:CDS | 35.0% | |
| CACCAAGTTTAATTGCCAAA+GGG | + | tig0029815:8267-8286 | Msa1442200:CDS | 35.0% | |
| !!! | GTTATTGTTGTTGCCGTTTT+TGG | + | tig0029815:8392-8411 | Msa1442200:CDS | 35.0% |
| ATTATGGTGCACATAAGGTT+CGG | + | tig0029815:8444-8463 | Msa1442200:CDS | 35.0% | |
| TCTCAAAAGGTAAGCTTAGT+TGG | + | tig0029815:8533-8552 | Msa1442200:CDS | 35.0% | |
| ! | GTTGGTGAAATGTAGGAATT+TGG | - | tig0029815:7762-7781 | None:intergenic | 35.0% |
| ATTCCTACATTTCACCAACA+TGG | + | tig0029815:7763-7782 | Msa1442200:CDS | 35.0% | |
| TTTGATGTTGAGAACCATGT+TGG | - | tig0029815:7780-7799 | None:intergenic | 35.0% | |
| CATTGAAATTGAAGCTGTTG+AGG | - | tig0029815:7838-7857 | None:intergenic | 35.0% | |
| CTCAACAGCTTCAATTTCAA+TGG | + | tig0029815:7836-7855 | Msa1442200:CDS | 35.0% | |
| AAGTTGTGGAGATGATATGA+GGG | - | tig0029815:7915-7934 | None:intergenic | 35.0% | |
| ! | GATTTTGTCAAGGATTATGG+AGG | - | tig0029815:7982-8001 | None:intergenic | 35.0% |
| !! | CTTGGTTTTCGATTTTGTCA+AGG | - | tig0029815:7992-8011 | None:intergenic | 35.0% |
| GAAAAAAAGCTATGGAAGCT+AGG | - | tig0029815:8037-8056 | None:intergenic | 35.0% | |
| !!! | ACCAAGAAGCTTTTTTGCAT+GGG | - | tig0029815:8176-8195 | None:intergenic | 35.0% |
| ACACCAAGTTTAATTGCCAA+AGG | + | tig0029815:8266-8285 | Msa1442200:CDS | 35.0% | |
| CACCAAGTTTAATTGCCAAA+GGG | + | tig0029815:8267-8286 | Msa1442200:CDS | 35.0% | |
| !!! | GTTATTGTTGTTGCCGTTTT+TGG | + | tig0029815:8392-8411 | Msa1442200:CDS | 35.0% |
| ATTATGGTGCACATAAGGTT+CGG | + | tig0029815:8444-8463 | Msa1442200:CDS | 35.0% | |
| TCTCAAAAGGTAAGCTTAGT+TGG | + | tig0029815:8533-8552 | Msa1442200:CDS | 35.0% | |
| GGAGTTTGATGTGGTTGAAA+AGG | - | tig0029815:7728-7747 | None:intergenic | 40.0% | |
| ! | GAACCATGTTGGTGAAATGT+AGG | - | tig0029815:7769-7788 | None:intergenic | 40.0% |
| CTGTTGAGGCTAACATGATT+AGG | - | tig0029815:7824-7843 | None:intergenic | 40.0% | |
| ATTGTTCCGTCTGTATCGAA+GGG | - | tig0029815:7891-7910 | None:intergenic | 40.0% | |
| AGTTGTGGAGATGATATGAG+GGG | - | tig0029815:7914-7933 | None:intergenic | 40.0% | |
| GAAGTTGTGGAGATGATATG+AGG | - | tig0029815:7916-7935 | None:intergenic | 40.0% | |
| TTTGTCAAGGATTATGGAGG+AGG | - | tig0029815:7979-7998 | None:intergenic | 40.0% | |
| GGAAGCTAGGAATTGTGTTA+GGG | - | tig0029815:8024-8043 | None:intergenic | 40.0% | |
| TGGAAGCTAGGAATTGTGTT+AGG | - | tig0029815:8025-8044 | None:intergenic | 40.0% | |
| TGTGATCAGCTGAATGAAGA+TGG | - | tig0029815:8076-8095 | None:intergenic | 40.0% | |
| TCTTCATTCAGCTGATCACA+TGG | + | tig0029815:8076-8095 | Msa1442200:CDS | 40.0% | |
| CTTCATTCAGCTGATCACAT+GGG | + | tig0029815:8077-8096 | Msa1442200:CDS | 40.0% | |
| AGAAGATGGTATTGTCCTTC+TGG | - | tig0029815:8104-8123 | None:intergenic | 40.0% | |
| CAAGAACTTGCAAGAGAAGA+TGG | - | tig0029815:8118-8137 | None:intergenic | 40.0% | |
| TCCCATGCAAAAAAGCTTCT+TGG | + | tig0029815:8172-8191 | Msa1442200:CDS | 40.0% | |
| !!! | GACCAAGAAGCTTTTTTGCA+TGG | - | tig0029815:8177-8196 | None:intergenic | 40.0% |
| !! | TTTTCAAGGCTTGTGGCTTA+TGG | + | tig0029815:8223-8242 | Msa1442200:CDS | 40.0% |
| CACCCTTTGGCAATTAAACT+TGG | - | tig0029815:8272-8291 | None:intergenic | 40.0% | |
| ! | TAAGGTTCGGTATTTCTCGT+TGG | + | tig0029815:8457-8476 | Msa1442200:CDS | 40.0% |
| ! | AAGGTTCGGTATTTCTCGTT+GGG | + | tig0029815:8458-8477 | Msa1442200:CDS | 40.0% |
| ! | TGATGATGTGGAGTCTCAAA+AGG | + | tig0029815:8520-8539 | Msa1442200:CDS | 40.0% |
| AACTCTTTCACCTGTTGACA+TGG | + | tig0029815:8589-8608 | Msa1442200:CDS | 40.0% | |
| TTTCACCTGTTGACATGGAA+AGG | + | tig0029815:8594-8613 | Msa1442200:CDS | 40.0% | |
| GGAGTTTGATGTGGTTGAAA+AGG | - | tig0029815:7728-7747 | None:intergenic | 40.0% | |
| ! | GAACCATGTTGGTGAAATGT+AGG | - | tig0029815:7769-7788 | None:intergenic | 40.0% |
| CTGTTGAGGCTAACATGATT+AGG | - | tig0029815:7824-7843 | None:intergenic | 40.0% | |
| ATTGTTCCGTCTGTATCGAA+GGG | - | tig0029815:7891-7910 | None:intergenic | 40.0% | |
| AGTTGTGGAGATGATATGAG+GGG | - | tig0029815:7914-7933 | None:intergenic | 40.0% | |
| GAAGTTGTGGAGATGATATG+AGG | - | tig0029815:7916-7935 | None:intergenic | 40.0% | |
| TTTGTCAAGGATTATGGAGG+AGG | - | tig0029815:7979-7998 | None:intergenic | 40.0% | |
| GGAAGCTAGGAATTGTGTTA+GGG | - | tig0029815:8024-8043 | None:intergenic | 40.0% | |
| TGGAAGCTAGGAATTGTGTT+AGG | - | tig0029815:8025-8044 | None:intergenic | 40.0% | |
| TGTGATCAGCTGAATGAAGA+TGG | - | tig0029815:8076-8095 | None:intergenic | 40.0% | |
| TCTTCATTCAGCTGATCACA+TGG | + | tig0029815:8076-8095 | Msa1442200:CDS | 40.0% | |
| CTTCATTCAGCTGATCACAT+GGG | + | tig0029815:8077-8096 | Msa1442200:CDS | 40.0% | |
| AGAAGATGGTATTGTCCTTC+TGG | - | tig0029815:8104-8123 | None:intergenic | 40.0% | |
| CAAGAACTTGCAAGAGAAGA+TGG | - | tig0029815:8118-8137 | None:intergenic | 40.0% | |
| TCCCATGCAAAAAAGCTTCT+TGG | + | tig0029815:8172-8191 | Msa1442200:CDS | 40.0% | |
| !!! | GACCAAGAAGCTTTTTTGCA+TGG | - | tig0029815:8177-8196 | None:intergenic | 40.0% |
| !! | TTTTCAAGGCTTGTGGCTTA+TGG | + | tig0029815:8223-8242 | Msa1442200:CDS | 40.0% |
| CACCCTTTGGCAATTAAACT+TGG | - | tig0029815:8272-8291 | None:intergenic | 40.0% | |
| ! | TAAGGTTCGGTATTTCTCGT+TGG | + | tig0029815:8457-8476 | Msa1442200:CDS | 40.0% |
| ! | AAGGTTCGGTATTTCTCGTT+GGG | + | tig0029815:8458-8477 | Msa1442200:CDS | 40.0% |
| ! | TGATGATGTGGAGTCTCAAA+AGG | + | tig0029815:8520-8539 | Msa1442200:CDS | 40.0% |
| AACTCTTTCACCTGTTGACA+TGG | + | tig0029815:8589-8608 | Msa1442200:CDS | 40.0% | |
| TTTCACCTGTTGACATGGAA+AGG | + | tig0029815:8594-8613 | Msa1442200:CDS | 40.0% | |
| GATTGTTCCGTCTGTATCGA+AGG | - | tig0029815:7892-7911 | None:intergenic | 45.0% | |
| TCAAAGCGTGTTCGAAGTTG+TGG | - | tig0029815:7929-7948 | None:intergenic | 45.0% | |
| ! | GTGTTAGGGCAAGTTTTGCT+TGG | - | tig0029815:8010-8029 | None:intergenic | 45.0% |
| AGGCTTGTGGCTTATGGTTA+TGG | + | tig0029815:8229-8248 | Msa1442200:CDS | 45.0% | |
| GGCTTGTGGCTTATGGTTAT+GGG | + | tig0029815:8230-8249 | Msa1442200:CDS | 45.0% | |
| GCTTGTGGCTTATGGTTATG+GGG | + | tig0029815:8231-8250 | Msa1442200:CDS | 45.0% | |
| TGGTTATGGGGTACATGCTT+TGG | + | tig0029815:8243-8262 | Msa1442200:CDS | 45.0% | |
| ! | AGGTTCGGTATTTCTCGTTG+GGG | + | tig0029815:8459-8478 | Msa1442200:CDS | 45.0% |
| GTATTTCTCGTTGGGGATTG+AGG | + | tig0029815:8466-8485 | Msa1442200:CDS | 45.0% | |
| GATTGTTCCGTCTGTATCGA+AGG | - | tig0029815:7892-7911 | None:intergenic | 45.0% | |
| TCAAAGCGTGTTCGAAGTTG+TGG | - | tig0029815:7929-7948 | None:intergenic | 45.0% | |
| ! | GTGTTAGGGCAAGTTTTGCT+TGG | - | tig0029815:8010-8029 | None:intergenic | 45.0% |
| AGGCTTGTGGCTTATGGTTA+TGG | + | tig0029815:8229-8248 | Msa1442200:CDS | 45.0% | |
| GGCTTGTGGCTTATGGTTAT+GGG | + | tig0029815:8230-8249 | Msa1442200:CDS | 45.0% | |
| GCTTGTGGCTTATGGTTATG+GGG | + | tig0029815:8231-8250 | Msa1442200:CDS | 45.0% | |
| TGGTTATGGGGTACATGCTT+TGG | + | tig0029815:8243-8262 | Msa1442200:CDS | 45.0% | |
| ! | AGGTTCGGTATTTCTCGTTG+GGG | + | tig0029815:8459-8478 | Msa1442200:CDS | 45.0% |
| GTATTTCTCGTTGGGGATTG+AGG | + | tig0029815:8466-8485 | Msa1442200:CDS | 45.0% | |
| CTTGTAGGACATGTAGCTCC+TGG | + | tig0029815:7672-7691 | Msa1442200:CDS | 50.0% | |
| !! | CTGTATCGAAGGGTTGGTGT+CGG | - | tig0029815:7881-7900 | None:intergenic | 50.0% |
| CACCAACCCTTCGATACAGA+CGG | + | tig0029815:7882-7901 | Msa1442200:CDS | 50.0% | |
| TTCCGTCTGTATCGAAGGGT+TGG | - | tig0029815:7887-7906 | None:intergenic | 50.0% | |
| CGAACACGCTTTGATCTCCA+TGG | + | tig0029815:7935-7954 | Msa1442200:CDS | 50.0% | |
| GTCAAGGATTATGGAGGAGG+CGG | - | tig0029815:7976-7995 | None:intergenic | 50.0% | |
| CTTGTAGGACATGTAGCTCC+TGG | + | tig0029815:7672-7691 | Msa1442200:CDS | 50.0% | |
| !! | CTGTATCGAAGGGTTGGTGT+CGG | - | tig0029815:7881-7900 | None:intergenic | 50.0% |
| CACCAACCCTTCGATACAGA+CGG | + | tig0029815:7882-7901 | Msa1442200:CDS | 50.0% | |
| TTCCGTCTGTATCGAAGGGT+TGG | - | tig0029815:7887-7906 | None:intergenic | 50.0% | |
| CGAACACGCTTTGATCTCCA+TGG | + | tig0029815:7935-7954 | Msa1442200:CDS | 50.0% | |
| GTCAAGGATTATGGAGGAGG+CGG | - | tig0029815:7976-7995 | None:intergenic | 50.0% | |
| !! | ATCGAAGGGTTGGTGTCGGT+CGG | - | tig0029815:7877-7896 | None:intergenic | 55.0% |
| GGCGTAGGTGAAGAAAGCCA+TGG | - | tig0029815:7955-7974 | None:intergenic | 55.0% | |
| GCTGATCACATGGGACCAGA+AGG | + | tig0029815:8086-8105 | Msa1442200:CDS | 55.0% | |
| !! | ATCGAAGGGTTGGTGTCGGT+CGG | - | tig0029815:7877-7896 | None:intergenic | 55.0% |
| GGCGTAGGTGAAGAAAGCCA+TGG | - | tig0029815:7955-7974 | None:intergenic | 55.0% | |
| GCTGATCACATGGGACCAGA+AGG | + | tig0029815:8086-8105 | Msa1442200:CDS | 55.0% | |
| !! | TCGAAGGGTTGGTGTCGGTC+GGG | - | tig0029815:7876-7895 | None:intergenic | 60.0% |
| GATTATGGAGGAGGCGGCGT+AGG | - | tig0029815:7970-7989 | None:intergenic | 60.0% | |
| !! | TCGAAGGGTTGGTGTCGGTC+GGG | - | tig0029815:7876-7895 | None:intergenic | 60.0% |
| GATTATGGAGGAGGCGGCGT+AGG | - | tig0029815:7970-7989 | None:intergenic | 60.0% | |
| !! | CGAAGGGTTGGTGTCGGTCG+GGG | - | tig0029815:7875-7894 | None:intergenic | 65.0% |
| !! | CGAAGGGTTGGTGTCGGTCG+GGG | - | tig0029815:7875-7894 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029815 | gene | 7663 | 8619 | 7663 | ID=Msa1442200;Name=Msa1442200 |
| tig0029815 | mRNA | 7663 | 8619 | 7663 | ID=Msa1442200-mRNA-1;Parent=Msa1442200;Name=Msa1442200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|318 |
| tig0029815 | exon | 7663 | 8619 | 7663 | ID=Msa1442200-mRNA-1:exon:13240;Parent=Msa1442200-mRNA-1 |
| tig0029815 | CDS | 7663 | 8619 | 7663 | ID=Msa1442200-mRNA-1:cds;Parent=Msa1442200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
