Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79400.t1 | XP_003599006.2 | 94.3 | 194 | 6 | 1 | 1 | 194 | 1 | 189 | 1.10E-52 | 216.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79400.t1 | G7IZC1 | 94.3 | 194 | 6 | 1 | 1 | 194 | 1 | 189 | 8.0e-53 | 216.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene79400 | 0.885875 | 5.58E-72 | -1.69E-46 |
| MS.gene049173 | MS.gene79400 | 0.840779 | 7.08E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene79400 | 0.847569 | 1.06E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene79400 | 0.892594 | 1.37E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene79400 | 0.861537 | 9.57E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene79400 | 0.907693 | 3.84E-81 | -1.69E-46 |
| MS.gene049320 | MS.gene79400 | 0.888353 | 6.37E-73 | -1.69E-46 |
| MS.gene049369 | MS.gene79400 | 0.827305 | 1.68E-54 | -1.69E-46 |
| MS.gene049396 | MS.gene79400 | 0.829366 | 5.36E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene79400 | 0.823126 | 1.64E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene79400 | 0.890539 | 8.99E-74 | -1.69E-46 |
| MS.gene049633 | MS.gene79400 | 0.882819 | 7.56E-71 | -1.69E-46 |
| MS.gene049805 | MS.gene79400 | 0.855657 | 5.44E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene79400 | 0.859243 | 4.73E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene79400 | 0.864471 | 1.19E-64 | -1.69E-46 |
| MS.gene050165 | MS.gene79400 | 0.855412 | 6.42E-62 | -1.69E-46 |
| MS.gene050170 | MS.gene79400 | 0.822303 | 2.55E-53 | -1.69E-46 |
| MS.gene050216 | MS.gene79400 | 0.825596 | 4.30E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene79400 | 0.860901 | 1.49E-63 | -1.69E-46 |
| MS.gene050333 | MS.gene79400 | 0.869916 | 2.16E-66 | -1.69E-46 |
| MS.gene050444 | MS.gene79400 | 0.814073 | 1.85E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene79400 | 0.831438 | 1.67E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene79400 | 0.879867 | 8.77E-70 | -1.69E-46 |
| MS.gene050518 | MS.gene79400 | 0.87837 | 2.97E-69 | -1.69E-46 |
| MS.gene050520 | MS.gene79400 | 0.819905 | 9.09E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene79400 | 0.818719 | 1.69E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene79400 | 0.823 | 1.75E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene79400 | 0.896694 | 2.88E-76 | -1.69E-46 |
| MS.gene050612 | MS.gene79400 | 0.873196 | 1.77E-67 | -1.69E-46 |
| MS.gene050647 | MS.gene79400 | -0.801395 | 9.19E-49 | -1.69E-46 |
| MS.gene050662 | MS.gene79400 | 0.845365 | 4.25E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene79400 | 0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene79400 | 0.867457 | 1.35E-65 | -1.69E-46 |
| MS.gene050686 | MS.gene79400 | 0.826923 | 2.08E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene79400 | 0.85589 | 4.65E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene79400 | 0.875512 | 2.91E-68 | -1.69E-46 |
| MS.gene050767 | MS.gene79400 | 0.81895 | 1.50E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene79400 | 0.821829 | 3.28E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene79400 | 0.916322 | 2.05E-85 | -1.69E-46 |
| MS.gene05080 | MS.gene79400 | 0.877672 | 5.21E-69 | -1.69E-46 |
| MS.gene05081 | MS.gene79400 | 0.82289 | 1.86E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene79400 | 0.873626 | 1.27E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene79400 | 0.871343 | 7.35E-67 | -1.69E-46 |
| MS.gene050876 | MS.gene79400 | 0.80203 | 6.81E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene79400 | 0.812587 | 3.93E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene79400 | 0.878662 | 2.34E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene79400 | 0.870146 | 1.82E-66 | -1.69E-46 |
| MS.gene05100 | MS.gene79400 | 0.825435 | 4.70E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene79400 | 0.8358 | 1.36E-56 | -1.69E-46 |
| MS.gene051228 | MS.gene79400 | 0.864916 | 8.62E-65 | -1.69E-46 |
| MS.gene051268 | MS.gene79400 | 0.8233 | 1.49E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene79400 | 0.818122 | 2.31E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene79400 | 0.848604 | 5.51E-60 | -1.69E-46 |
| MS.gene051434 | MS.gene79400 | 0.803806 | 2.92E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene79400 | 0.84863 | 5.42E-60 | -1.69E-46 |
| MS.gene051617 | MS.gene79400 | 0.834835 | 2.38E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene79400 | 0.838337 | 3.05E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene79400 | 0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene79400 | 0.822195 | 2.70E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene79400 | 0.864598 | 1.08E-64 | -1.69E-46 |
| MS.gene051838 | MS.gene79400 | 0.823388 | 1.42E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene79400 | 0.857288 | 1.81E-62 | -1.69E-46 |
| MS.gene051874 | MS.gene79400 | 0.843834 | 1.10E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene79400 | 0.815582 | 8.59E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene79400 | 0.821727 | 3.46E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene79400 | 0.87395 | 9.88E-68 | -1.69E-46 |
| MS.gene052379 | MS.gene79400 | 0.85461 | 1.10E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene79400 | 0.829607 | 4.68E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene79400 | 0.830337 | 3.11E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene79400 | 0.818513 | 1.89E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene79400 | 0.834752 | 2.50E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene79400 | 0.823099 | 1.66E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene79400 | 0.83733 | 5.54E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene79400 | 0.850649 | 1.48E-60 | -1.69E-46 |
| MS.gene052822 | MS.gene79400 | 0.851447 | 8.82E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene79400 | 0.810367 | 1.19E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene79400 | 0.803897 | 2.80E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene79400 | 0.889505 | 2.28E-73 | -1.69E-46 |
| MS.gene052872 | MS.gene79400 | 0.889798 | 1.75E-73 | -1.69E-46 |
| MS.gene052916 | MS.gene79400 | 0.850908 | 1.25E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene79400 | 0.86069 | 1.73E-63 | -1.69E-46 |
| MS.gene053009 | MS.gene79400 | 0.833343 | 5.63E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene79400 | 0.824259 | 8.89E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene79400 | 0.866985 | 1.91E-65 | -1.69E-46 |
| MS.gene053107 | MS.gene79400 | 0.819253 | 1.28E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene79400 | 0.860494 | 1.99E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene79400 | 0.859359 | 4.37E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene79400 | 0.891524 | 3.67E-74 | -1.69E-46 |
| MS.gene053286 | MS.gene79400 | 0.888103 | 7.94E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene79400 | 0.852635 | 4.06E-61 | -1.69E-46 |
| MS.gene053384 | MS.gene79400 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene79400 | -0.804601 | 2.00E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene79400 | 0.8265 | 2.62E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene79400 | 0.841257 | 5.30E-58 | -1.69E-46 |
| MS.gene053479 | MS.gene79400 | 0.862116 | 6.37E-64 | -1.69E-46 |
| MS.gene053574 | MS.gene79400 | 0.904859 | 7.90E-80 | -1.69E-46 |
| MS.gene053626 | MS.gene79400 | 0.834496 | 2.90E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene79400 | 0.830069 | 3.61E-55 | -1.69E-46 |
| MS.gene053633 | MS.gene79400 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene79400 | 0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene79400 | 0.882574 | 9.30E-71 | -1.69E-46 |
| MS.gene053912 | MS.gene79400 | 0.805874 | 1.08E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene79400 | 0.846715 | 1.82E-59 | -1.69E-46 |
| MS.gene054003 | MS.gene79400 | 0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene79400 | 0.852617 | 4.10E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene79400 | 0.8669 | 2.03E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene79400 | 0.871255 | 7.86E-67 | -1.69E-46 |
| MS.gene054642 | MS.gene79400 | 0.895852 | 6.46E-76 | -1.69E-46 |
| MS.gene05470 | MS.gene79400 | 0.821878 | 3.19E-53 | -1.69E-46 |
| MS.gene054927 | MS.gene79400 | 0.823007 | 1.75E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene79400 | 0.81854 | 1.86E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene79400 | 0.877433 | 6.31E-69 | -1.69E-46 |
| MS.gene05505 | MS.gene79400 | 0.862978 | 3.46E-64 | -1.69E-46 |
| MS.gene055154 | MS.gene79400 | -0.810234 | 1.28E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene79400 | 0.860514 | 1.96E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene79400 | 0.838403 | 2.94E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene79400 | 0.882342 | 1.13E-70 | -1.69E-46 |
| MS.gene055289 | MS.gene79400 | 0.833375 | 5.53E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene79400 | 0.874936 | 4.57E-68 | -1.69E-46 |
| MS.gene055397 | MS.gene79400 | 0.808078 | 3.70E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene79400 | 0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene79400 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene79400 | 0.890684 | 7.89E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene79400 | 0.874755 | 5.27E-68 | -1.69E-46 |
| MS.gene055636 | MS.gene79400 | 0.858326 | 8.89E-63 | -1.69E-46 |
| MS.gene055638 | MS.gene79400 | 0.843767 | 1.14E-58 | -1.69E-46 |
| MS.gene055647 | MS.gene79400 | 0.86085 | 1.55E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene79400 | 0.910108 | 2.71E-82 | -1.69E-46 |
| MS.gene055748 | MS.gene79400 | 0.85844 | 8.23E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene79400 | 0.870377 | 1.53E-66 | -1.69E-46 |
| MS.gene055751 | MS.gene79400 | 0.862977 | 3.46E-64 | -1.69E-46 |
| MS.gene055776 | MS.gene79400 | 0.811777 | 5.91E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene79400 | 0.83781 | 4.17E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene79400 | 0.893032 | 9.17E-75 | -1.69E-46 |
| MS.gene055941 | MS.gene79400 | 0.884406 | 1.97E-71 | -1.69E-46 |
| MS.gene056083 | MS.gene79400 | 0.838973 | 2.09E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene79400 | 0.83273 | 8.00E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene79400 | 0.866251 | 3.27E-65 | -1.69E-46 |
| MS.gene056422 | MS.gene79400 | 0.858753 | 6.63E-63 | -1.69E-46 |
| MS.gene056446 | MS.gene79400 | 0.82924 | 5.75E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene79400 | 0.825234 | 5.24E-54 | -1.69E-46 |
| MS.gene056449 | MS.gene79400 | 0.80116 | 1.03E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene79400 | 0.858877 | 6.09E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene79400 | 0.892928 | 1.01E-74 | -1.69E-46 |
| MS.gene056511 | MS.gene79400 | 0.826892 | 2.11E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene79400 | 0.845258 | 4.54E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene79400 | 0.886256 | 4.01E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene79400 | 0.844438 | 7.56E-59 | -1.69E-46 |
| MS.gene056897 | MS.gene79400 | 0.853403 | 2.45E-61 | -1.69E-46 |
| MS.gene056898 | MS.gene79400 | 0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene79400 | 0.811549 | 6.62E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene79400 | 0.834435 | 3.00E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene79400 | 0.833479 | 5.21E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene79400 | 0.868204 | 7.77E-66 | -1.69E-46 |
| MS.gene057086 | MS.gene79400 | 0.823939 | 1.06E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene79400 | 0.851018 | 1.17E-60 | -1.69E-46 |
| MS.gene057146 | MS.gene79400 | 0.823661 | 1.23E-53 | -1.69E-46 |
| MS.gene057285 | MS.gene79400 | 0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene79400 | 0.915282 | 7.08E-85 | -1.69E-46 |
| MS.gene057416 | MS.gene79400 | 0.898893 | 3.39E-77 | -1.69E-46 |
| MS.gene057658 | MS.gene79400 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene79400 | 0.826495 | 2.63E-54 | -1.69E-46 |
| MS.gene057805 | MS.gene79400 | 0.807737 | 4.37E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene79400 | 0.841221 | 5.42E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene79400 | 0.809144 | 2.19E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene79400 | 0.80633 | 8.67E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene79400 | 0.83104 | 2.09E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene79400 | 0.828817 | 7.28E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene79400 | 0.822708 | 2.05E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene79400 | 0.853508 | 2.28E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene79400 | 0.861869 | 7.57E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene79400 | 0.847963 | 8.29E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene79400 | 0.897088 | 1.97E-76 | -1.69E-46 |
| MS.gene058419 | MS.gene79400 | 0.892925 | 1.01E-74 | -1.69E-46 |
| MS.gene058459 | MS.gene79400 | 0.82692 | 2.08E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene79400 | 0.874828 | 4.98E-68 | -1.69E-46 |
| MS.gene058700 | MS.gene79400 | 0.816058 | 6.72E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene79400 | 0.832691 | 8.18E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene79400 | 0.895968 | 5.78E-76 | -1.69E-46 |
| MS.gene058838 | MS.gene79400 | 0.839503 | 1.52E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene79400 | 0.826427 | 2.73E-54 | -1.69E-46 |
| MS.gene058840 | MS.gene79400 | -0.805201 | 1.50E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene79400 | -0.809107 | 2.23E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene79400 | 0.884013 | 2.75E-71 | -1.69E-46 |
| MS.gene059023 | MS.gene79400 | 0.88706 | 1.99E-72 | -1.69E-46 |
| MS.gene059029 | MS.gene79400 | 0.861009 | 1.39E-63 | -1.69E-46 |
| MS.gene05913 | MS.gene79400 | 0.870686 | 1.21E-66 | -1.69E-46 |
| MS.gene059305 | MS.gene79400 | 0.856844 | 2.44E-62 | -1.69E-46 |
| MS.gene05934 | MS.gene79400 | 0.845768 | 3.30E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene79400 | 0.809323 | 2.00E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene79400 | 0.844068 | 9.50E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene79400 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene79400 | 0.87574 | 2.43E-68 | -1.69E-46 |
| MS.gene059688 | MS.gene79400 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene79400 | 0.836101 | 1.14E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene79400 | 0.872954 | 2.14E-67 | -1.69E-46 |
| MS.gene059756 | MS.gene79400 | 0.846674 | 1.87E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene79400 | 0.830677 | 2.57E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene79400 | 0.887981 | 8.85E-73 | -1.69E-46 |
| MS.gene059902 | MS.gene79400 | 0.851873 | 6.68E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene79400 | 0.841961 | 3.46E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene79400 | 0.818388 | 2.01E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene79400 | 0.821328 | 4.28E-53 | -1.69E-46 |
| MS.gene060401 | MS.gene79400 | 0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene79400 | 0.833341 | 5.64E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene79400 | 0.845036 | 5.22E-59 | -1.69E-46 |
| MS.gene060728 | MS.gene79400 | 0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene79400 | 0.869115 | 3.94E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene79400 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene79400 | 0.866828 | 2.14E-65 | -1.69E-46 |
| MS.gene060804 | MS.gene79400 | 0.852773 | 3.71E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene79400 | 0.84988 | 2.43E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene79400 | 0.847272 | 1.28E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene79400 | 0.862821 | 3.86E-64 | -1.69E-46 |
| MS.gene06092 | MS.gene79400 | 0.87925 | 1.45E-69 | -1.69E-46 |
| MS.gene06097 | MS.gene79400 | 0.831599 | 1.52E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene79400 | 0.858331 | 8.86E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene79400 | 0.817655 | 2.95E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene79400 | 0.836223 | 1.06E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene79400 | 0.881198 | 2.93E-70 | -1.69E-46 |
| MS.gene061171 | MS.gene79400 | 0.804354 | 2.25E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene79400 | 0.858843 | 6.24E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79400.t1 | MTR_3g026020 | 94.845 | 194 | 5 | 1 | 1 | 194 | 1 | 189 | 2.04e-126 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79400.t1 | AT5G08050 | 63.190 | 163 | 45 | 2 | 31 | 192 | 8 | 156 | 3.67e-51 | 162 |
Find 40 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTCGAGGTTGGATTAC+AGG | 0.269782 | 3.1:+16885791 | MS.gene79400:CDS |
| GAGACAGATGGAACTGGTTT+GGG | 0.332824 | 3.1:-16884270 | None:intergenic |
| AGAGACAGATGGAACTGGTT+TGG | 0.346099 | 3.1:-16884271 | None:intergenic |
| TGTGTTGTTGGTGGTTCTGC+TGG | 0.362863 | 3.1:+16885831 | MS.gene79400:CDS |
| TAAAACTGTAGCTTCTAAAA+AGG | 0.383526 | 3.1:+16884293 | MS.gene79400:CDS |
| GTTGCTTTGGTCTGTGTTGT+TGG | 0.388658 | 3.1:+16885819 | MS.gene79400:CDS |
| ATTACAGGCTGTGGTTGCTT+TGG | 0.392075 | 3.1:+16885806 | MS.gene79400:CDS |
| TAGCGATAATCCTGCTTTCT+CGG | 0.404741 | 3.1:-16885613 | None:intergenic |
| CATTCTTGTGAGGAGTTTAA+CGG | 0.405852 | 3.1:-16885538 | None:intergenic |
| TAAACCTGCTTTCTCTGCCT+TGG | 0.422974 | 3.1:-16885580 | None:intergenic |
| AACCTCGACAACATTATCTT+CGG | 0.427394 | 3.1:-16885781 | None:intergenic |
| CGTTAAACTCCTCACAAGAA+TGG | 0.467112 | 3.1:+16885539 | MS.gene79400:CDS |
| GCCATGGATTTGACCAGAAA+AGG | 0.471154 | 3.1:-16884243 | None:intergenic |
| AAGAGTGATCCTGGAGTTGA+TGG | 0.471176 | 3.1:-16885705 | None:intergenic |
| GATCAAGCTGTTACTACAGA+TGG | 0.487910 | 3.1:-16884178 | None:intergenic |
| CTATCAACAATAGAGAAACT+TGG | 0.493062 | 3.1:+16885633 | MS.gene79400:CDS |
| CTGAGTGTGAAGAGTGATCC+TGG | 0.494258 | 3.1:-16885714 | None:intergenic |
| ACCTCGACAACATTATCTTC+GGG | 0.509562 | 3.1:-16885780 | None:intergenic |
| GAAGATAATGTTGTCGAGGT+TGG | 0.509847 | 3.1:+16885783 | MS.gene79400:CDS |
| TTATCAGCCGCCGAGAAAGC+AGG | 0.520670 | 3.1:+16885603 | MS.gene79400:CDS |
| AACTGGTTTGGGAGTAGCCA+TGG | 0.526284 | 3.1:-16884259 | None:intergenic |
| GCTTTGGTCTGTGTTGTTGG+TGG | 0.531295 | 3.1:+16885822 | MS.gene79400:CDS |
| CGAGGTTGGATTACAGGCTG+TGG | 0.533900 | 3.1:+16885797 | MS.gene79400:CDS |
| AATTCAACTGTATTCCCACT+TGG | 0.537612 | 3.1:+16885480 | MS.gene79400:CDS |
| CTCTCAAAAGCAGAAGAACT+CGG | 0.539080 | 3.1:+16885660 | MS.gene79400:CDS |
| TTAACCAAGGCAGAGAAAGC+AGG | 0.541705 | 3.1:+16885576 | MS.gene79400:CDS |
| GCTACTGATCCATCAACTCC+AGG | 0.551246 | 3.1:+16885696 | MS.gene79400:CDS |
| ATTCAACTGTATTCCCACTT+GGG | 0.553323 | 3.1:+16885481 | MS.gene79400:CDS |
| ACTTATGATGATGACAATGA+AGG | 0.557494 | 3.1:+16884146 | None:intergenic |
| TCAGTTGTTCCATTCTTGTG+AGG | 0.560445 | 3.1:-16885548 | None:intergenic |
| TCCGTGGTTGTTCCCCAAGT+GGG | 0.573088 | 3.1:-16885494 | None:intergenic |
| TTCAACTGTATTCCCACTTG+GGG | 0.603934 | 3.1:+16885482 | MS.gene79400:CDS |
| TCCCGAAGATAATGTTGTCG+AGG | 0.604575 | 3.1:+16885779 | MS.gene79400:CDS |
| CTCCGTGGTTGTTCCCCAAG+TGG | 0.614234 | 3.1:-16885495 | None:intergenic |
| GGAACAAGATAAACAAACAA+AGG | 0.614999 | 3.1:-16885759 | None:intergenic |
| TCCCACTTGGGGAACAACCA+CGG | 0.646839 | 3.1:+16885493 | MS.gene79400:CDS |
| GTTACTACAGATGGATGCTG+AGG | 0.660105 | 3.1:-16884169 | None:intergenic |
| GTCGATGTTACAGCACTCCG+TGG | 0.693005 | 3.1:-16885510 | None:intergenic |
| CGATAATCCTGCTTTCTCGG+CGG | 0.695629 | 3.1:-16885610 | None:intergenic |
| ACAACTGAGACTGTTAACCA+AGG | 0.730927 | 3.1:+16885563 | MS.gene79400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACATAAAAATTTCTATGT+AGG | - | chr3.1:16884867-16884886 | None:intergenic | 15.0% |
| !! | TAATATTGCATAATGATAAA+AGG | - | chr3.1:16884392-16884411 | None:intergenic | 15.0% |
| !!! | ATGTTATCAAACTTTTAAGT+AGG | + | chr3.1:16884881-16884900 | MS.gene79400:intron | 20.0% |
| !!! | ATTATGTAAACCATGTTTTT+TGG | + | chr3.1:16885035-16885054 | MS.gene79400:intron | 20.0% |
| !!! | TAGAAATGCTTTGTTTAAAT+AGG | - | chr3.1:16885006-16885025 | None:intergenic | 20.0% |
| !!! | TATATTTTCAAAAAATCACC+TGG | + | chr3.1:16884809-16884828 | MS.gene79400:intron | 20.0% |
| !!! | TTATGTAAACCATGTTTTTT+GGG | + | chr3.1:16885036-16885055 | MS.gene79400:intron | 20.0% |
| !!! | TTATTTTATTTTCTGCAAGT+TGG | - | chr3.1:16885880-16885899 | None:intergenic | 20.0% |
| ! | AACCTTTCTCATAATTAAAG+TGG | - | chr3.1:16884454-16884473 | None:intergenic | 25.0% |
| ! | ATTGAAAAGGTTAAATAACC+AGG | - | chr3.1:16884830-16884849 | None:intergenic | 25.0% |
| ! | CAAACTCCTATAACAAATTA+CGG | - | chr3.1:16884596-16884615 | None:intergenic | 25.0% |
| ! | TACCACTTTAATTATGAGAA+AGG | + | chr3.1:16884449-16884468 | MS.gene79400:intron | 25.0% |
| ! | TTATGCAATATTATACTGTG+TGG | + | chr3.1:16884399-16884418 | MS.gene79400:intron | 25.0% |
| !! | AAACAAAGCATTTCTAAACA+TGG | + | chr3.1:16885010-16885029 | MS.gene79400:intron | 25.0% |
| !! | AGGAATCTTTAGGAAAAAAA+GGG | + | chr3.1:16884783-16884802 | MS.gene79400:intron | 25.0% |
| !! | TAAAACTGTAGCTTCTAAAA+AGG | + | chr3.1:16884293-16884312 | MS.gene79400:CDS | 25.0% |
| !! | TAGAATTTTCCCAAAAAACA+TGG | - | chr3.1:16885048-16885067 | None:intergenic | 25.0% |
| !!! | ACTAGTTCTAAAAAACATCT+GGG | + | chr3.1:16885204-16885223 | MS.gene79400:intron | 25.0% |
| !!! | AGCTTTGTTTTACTTCTTTT+AGG | + | chr3.1:16885735-16885754 | MS.gene79400:CDS | 25.0% |
| !!! | CATAAACCGTAATTTGTTAT+AGG | + | chr3.1:16884587-16884606 | MS.gene79400:intron | 25.0% |
| !!! | TACTAGTTCTAAAAAACATC+TGG | + | chr3.1:16885203-16885222 | MS.gene79400:intron | 25.0% |
| !!! | TGTTTTTTGGGAAAATTCTA+TGG | + | chr3.1:16885048-16885067 | MS.gene79400:intron | 25.0% |
| ACTCATATGGTAAAAGACTA+AGG | + | chr3.1:16884672-16884691 | MS.gene79400:intron | 30.0% | |
| ATTACGGTTTATGTATACCT+AGG | - | chr3.1:16884580-16884599 | None:intergenic | 30.0% | |
| CTATCAACAATAGAGAAACT+TGG | + | chr3.1:16885633-16885652 | MS.gene79400:CDS | 30.0% | |
| GGAACAAGATAAACAAACAA+AGG | - | chr3.1:16885762-16885781 | None:intergenic | 30.0% | |
| TGTGTGTTCTATCAAAACAA+AGG | - | chr3.1:16885268-16885287 | None:intergenic | 30.0% | |
| ! | ACAGACTTGTGTAAAACTTT+TGG | + | chr3.1:16884637-16884656 | MS.gene79400:intron | 30.0% |
| ! | ACTTTTCTCACCAAAAAAAC+AGG | - | chr3.1:16885420-16885439 | None:intergenic | 30.0% |
| ! | CAGGAATCTTTAGGAAAAAA+AGG | + | chr3.1:16884782-16884801 | MS.gene79400:intron | 30.0% |
| ! | TGCTCTTTGATGATATGATA+TGG | + | chr3.1:16884554-16884573 | MS.gene79400:intron | 30.0% |
| !! | ATGCTTTGTTTAAATAGGTC+TGG | - | chr3.1:16885001-16885020 | None:intergenic | 30.0% |
| !! | TCATCAAAGAGCATTAAAAC+TGG | - | chr3.1:16884547-16884566 | None:intergenic | 30.0% |
| !! | TCTCTACGATAATTTTCAAG+TGG | + | chr3.1:16885378-16885397 | MS.gene79400:intron | 30.0% |
| !! | TTTTTGGGAAAATTCTATGG+TGG | + | chr3.1:16885051-16885070 | MS.gene79400:intron | 30.0% |
| AACCTCGACAACATTATCTT+CGG | - | chr3.1:16885784-16885803 | None:intergenic | 35.0% | |
| AATTCAACTGTATTCCCACT+TGG | + | chr3.1:16885480-16885499 | MS.gene79400:CDS | 35.0% | |
| ACCATATGAGTTGTACTTAC+CGG | - | chr3.1:16884663-16884682 | None:intergenic | 35.0% | |
| ATTCAACTGTATTCCCACTT+GGG | + | chr3.1:16885481-16885500 | MS.gene79400:CDS | 35.0% | |
| CATTCTTGTGAGGAGTTTAA+CGG | - | chr3.1:16885541-16885560 | None:intergenic | 35.0% | |
| CTATGACTCATAGTACTTGT+TGG | + | chr3.1:16885125-16885144 | MS.gene79400:intron | 35.0% | |
| CTTTGTCTTAATGAGTGAGA+CGG | + | chr3.1:16885168-16885187 | MS.gene79400:intron | 35.0% | |
| GGTCTGACAAGTACTAAAAA+TGG | + | chr3.1:16884927-16884946 | MS.gene79400:intron | 35.0% | |
| GTACTATGAGTCATAGTTTC+AGG | - | chr3.1:16885121-16885140 | None:intergenic | 35.0% | |
| TCTCACTCATTAAGACAAAG+AGG | - | chr3.1:16885168-16885187 | None:intergenic | 35.0% | |
| TTTAAGTAGGCTAATACGTC+AGG | + | chr3.1:16884894-16884913 | MS.gene79400:intron | 35.0% | |
| ! | ACAGTCATTGTTGCTGTTAT+AGG | - | chr3.1:16885311-16885330 | None:intergenic | 35.0% |
| ! | ACTTGTGTAAAACTTTTGGC+CGG | + | chr3.1:16884641-16884660 | MS.gene79400:intron | 35.0% |
| ! | GTTTTGTAGCAGGAATCTTT+AGG | + | chr3.1:16884773-16884792 | MS.gene79400:intron | 35.0% |
| ! | TAGTACTTGTCAGACCTTTT+CGG | - | chr3.1:16884923-16884942 | None:intergenic | 35.0% |
| ! | TGTTGCTGTTATAGGTGATA+CGG | - | chr3.1:16885303-16885322 | None:intergenic | 35.0% |
| ! | TTGATGATATGATATGGCCT+AGG | + | chr3.1:16884560-16884579 | MS.gene79400:intron | 35.0% |
| !! | AAAAAAACAGGCTGGTTCTA+CGG | - | chr3.1:16885408-16885427 | None:intergenic | 35.0% |
| !! | ACACAAAGTGTTGAGAAGTA+GGG | - | chr3.1:16884739-16884758 | None:intergenic | 35.0% |
| !! | CATCGGTTGTTACTTGTTAT+TGG | + | chr3.1:16885353-16885372 | MS.gene79400:intron | 35.0% |
| ACAACTGAGACTGTTAACCA+AGG | + | chr3.1:16885563-16885582 | MS.gene79400:CDS | 40.0% | |
| ACCTCGACAACATTATCTTC+GGG | - | chr3.1:16885783-16885802 | None:intergenic | 40.0% | |
| CGTTAAACTCCTCACAAGAA+TGG | + | chr3.1:16885539-16885558 | MS.gene79400:CDS | 40.0% | |
| CTCTCAAAAGCAGAAGAACT+CGG | + | chr3.1:16885660-16885679 | MS.gene79400:CDS | 40.0% | |
| GAAGATAATGTTGTCGAGGT+TGG | + | chr3.1:16885783-16885802 | MS.gene79400:CDS | 40.0% | |
| GATCAAGCTGTTACTACAGA+TGG | - | chr3.1:16884181-16884200 | None:intergenic | 40.0% | |
| TAGCGATAATCCTGCTTTCT+CGG | - | chr3.1:16885616-16885635 | None:intergenic | 40.0% | |
| TCAGTTGTTCCATTCTTGTG+AGG | - | chr3.1:16885551-16885570 | None:intergenic | 40.0% | |
| TTCAACTGTATTCCCACTTG+GGG | + | chr3.1:16885482-16885501 | MS.gene79400:CDS | 40.0% | |
| TTCTCACCAAAAAAACAGGC+TGG | - | chr3.1:16885416-16885435 | None:intergenic | 40.0% | |
| ! | AGTGTTGAGAAGTAGGGAAT+CGG | - | chr3.1:16884733-16884752 | None:intergenic | 40.0% |
| ! | TCACACTTTCTCACCTTTTC+TGG | + | chr3.1:16884230-16884249 | MS.gene79400:CDS | 40.0% |
| !! | ACCTTTTCTGGTCAAATCCA+TGG | + | chr3.1:16884242-16884261 | MS.gene79400:CDS | 40.0% |
| !! | AGAGTTTTGTGTTGAAGGAG+AGG | - | chr3.1:16884211-16884230 | None:intergenic | 40.0% |
| !! | CACACAAAGTGTTGAGAAGT+AGG | - | chr3.1:16884740-16884759 | None:intergenic | 40.0% |
| !! | CATTTGATTTGCTCAGAAGC+AGG | + | chr3.1:16884698-16884717 | MS.gene79400:intron | 40.0% |
| !! | GTGTGAGAGTTTTGTGTTGA+AGG | - | chr3.1:16884216-16884235 | None:intergenic | 40.0% |
| !!! | GCTACAGTTTTAGAGACAGA+TGG | - | chr3.1:16884285-16884304 | None:intergenic | 40.0% |
| !!! | GTAGAACCAGCCTGTTTTTT+TGG | + | chr3.1:16885407-16885426 | MS.gene79400:intron | 40.0% |
| !!! | GTTTTAGAGACAGATGGAAC+TGG | - | chr3.1:16884279-16884298 | None:intergenic | 40.0% |
| AAGAGTGATCCTGGAGTTGA+TGG | - | chr3.1:16885708-16885727 | None:intergenic | 45.0% | |
| AGAGACAGATGGAACTGGTT+TGG | - | chr3.1:16884274-16884293 | None:intergenic | 45.0% | |
| AGGTGATACGGTGACTTGAT+TGG | - | chr3.1:16885291-16885310 | None:intergenic | 45.0% | |
| ATTACAGGCTGTGGTTGCTT+TGG | + | chr3.1:16885806-16885825 | MS.gene79400:CDS | 45.0% | |
| CTATGGTGGTCCACTTAGAT+AGG | + | chr3.1:16885065-16885084 | MS.gene79400:intron | 45.0% | |
| GCCATGGATTTGACCAGAAA+AGG | - | chr3.1:16884246-16884265 | None:intergenic | 45.0% | |
| GCCGGTAAGTACAACTCATA+TGG | + | chr3.1:16884659-16884678 | MS.gene79400:intron | 45.0% | |
| GTGTTGAGAAGTAGGGAATC+GGG | - | chr3.1:16884732-16884751 | None:intergenic | 45.0% | |
| GTTACTACAGATGGATGCTG+AGG | - | chr3.1:16884172-16884191 | None:intergenic | 45.0% | |
| TAAACCTGCTTTCTCTGCCT+TGG | - | chr3.1:16885583-16885602 | None:intergenic | 45.0% | |
| TCCACTTAGATAGGTGTCCA+CGG | + | chr3.1:16885074-16885093 | MS.gene79400:intron | 45.0% | |
| TCCCGAAGATAATGTTGTCG+AGG | + | chr3.1:16885779-16885798 | MS.gene79400:CDS | 45.0% | |
| TCTACTTCCAAGAGCGACAT+CGG | + | chr3.1:16885336-16885355 | MS.gene79400:intron | 45.0% | |
| TGTTGTCGAGGTTGGATTAC+AGG | + | chr3.1:16885791-16885810 | MS.gene79400:CDS | 45.0% | |
| TTAACCAAGGCAGAGAAAGC+AGG | + | chr3.1:16885576-16885595 | MS.gene79400:CDS | 45.0% | |
| ! | GAGACAGATGGAACTGGTTT+GGG | - | chr3.1:16884273-16884292 | None:intergenic | 45.0% |
| ! | GTTGCTTTGGTCTGTGTTGT+TGG | + | chr3.1:16885819-16885838 | MS.gene79400:CDS | 45.0% |
| ! | TACTTGTCAGACCTTTTCGG+AGG | - | chr3.1:16884920-16884939 | None:intergenic | 45.0% |
| !! | CGAGTTCTTCTGCTTTTGAG+AGG | - | chr3.1:16885662-16885681 | None:intergenic | 45.0% |
| !! | GTGAGTGTGAGTTTTGTAGC+AGG | + | chr3.1:16884763-16884782 | MS.gene79400:intron | 45.0% |
| !! | TAATAATTAAATTATTGAAA+AGG | - | chr3.1:16884843-16884862 | None:intergenic | 5.0% |
| AATACGTCAGGCCTCCGAAA+AGG | + | chr3.1:16884906-16884925 | MS.gene79400:intron | 50.0% | |
| ACCGTGGACACCTATCTAAG+TGG | - | chr3.1:16885078-16885097 | None:intergenic | 50.0% | |
| ACTTAGATAGGTGTCCACGG+TGG | + | chr3.1:16885077-16885096 | MS.gene79400:intron | 50.0% | |
| CGATAATCCTGCTTTCTCGG+CGG | - | chr3.1:16885613-16885632 | None:intergenic | 50.0% | |
| CTGAGTGTGAAGAGTGATCC+TGG | - | chr3.1:16885717-16885736 | None:intergenic | 50.0% | |
| GCTACTGATCCATCAACTCC+AGG | + | chr3.1:16885696-16885715 | MS.gene79400:CDS | 50.0% | |
| GTAACAACCGATGTCGCTCT+TGG | - | chr3.1:16885346-16885365 | None:intergenic | 50.0% | |
| ! | GCTTTGGTCTGTGTTGTTGG+TGG | + | chr3.1:16885822-16885841 | MS.gene79400:CDS | 50.0% |
| !! | AACTGGTTTGGGAGTAGCCA+TGG | - | chr3.1:16884262-16884281 | None:intergenic | 50.0% |
| !! | TGTGTTGTTGGTGGTTCTGC+TGG | + | chr3.1:16885831-16885850 | MS.gene79400:CDS | 50.0% |
| !! | TTTCAAGCGTTGATCCACCG+TGG | - | chr3.1:16885094-16885113 | None:intergenic | 50.0% |
| CGAGGTTGGATTACAGGCTG+TGG | + | chr3.1:16885797-16885816 | MS.gene79400:CDS | 55.0% | |
| GAGTGAGACGGTGACTCGAT+TGG | + | chr3.1:16885180-16885199 | MS.gene79400:intron | 55.0% | |
| GTCGATGTTACAGCACTCCG+TGG | - | chr3.1:16885513-16885532 | None:intergenic | 55.0% | |
| TCCCACTTGGGGAACAACCA+CGG | + | chr3.1:16885493-16885512 | MS.gene79400:CDS | 55.0% | |
| TCCGTGGTTGTTCCCCAAGT+GGG | - | chr3.1:16885497-16885516 | None:intergenic | 55.0% | |
| TTATCAGCCGCCGAGAAAGC+AGG | + | chr3.1:16885603-16885622 | MS.gene79400:CDS | 55.0% | |
| !!! | GGTGGTTCTGCTGGTTTTGC+TGG | + | chr3.1:16885840-16885859 | MS.gene79400:CDS | 55.0% |
| CTCCGTGGTTGTTCCCCAAG+TGG | - | chr3.1:16885498-16885517 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 16884150 | 16885899 | 16884150 | ID=MS.gene79400 |
| chr3.1 | mRNA | 16884150 | 16885899 | 16884150 | ID=MS.gene79400.t1;Parent=MS.gene79400 |
| chr3.1 | exon | 16884150 | 16884314 | 16884150 | ID=MS.gene79400.t1.exon1;Parent=MS.gene79400.t1 |
| chr3.1 | CDS | 16884150 | 16884314 | 16884150 | ID=cds.MS.gene79400.t1;Parent=MS.gene79400.t1 |
| chr3.1 | exon | 16885480 | 16885899 | 16885480 | ID=MS.gene79400.t1.exon2;Parent=MS.gene79400.t1 |
| chr3.1 | CDS | 16885480 | 16885899 | 16885480 | ID=cds.MS.gene79400.t1;Parent=MS.gene79400.t1 |
| Gene Sequence |
| Protein sequence |
