AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020726.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020726.01.T02 MTR_4g057685 96.859 191 1 1 1 191 1 186 5.21e-138 383
MsG0480020726.01.T02 MTR_4g057685 96.859 191 1 1 1 191 49 234 1.34e-137 384
MsG0480020726.01.T02 MTR_8g102980 32.692 156 69 7 29 180 86 209 1.47e-15 73.9
MsG0480020726.01.T02 MTR_8g102980 32.692 156 69 7 29 180 86 209 1.58e-15 73.6
MsG0480020726.01.T02 MTR_4g132270 28.662 157 80 5 29 183 16 142 1.76e-13 67.4
MsG0480020726.01.T02 MTR_4g132270 28.662 157 80 5 29 183 39 165 2.14e-13 67.4
MsG0480020726.01.T02 MTR_4g132260 29.936 157 78 6 29 183 16 142 2.50e-13 67.0
MsG0480020726.01.T02 MTR_2g023500 29.870 154 76 6 31 182 24 147 2.43e-12 64.3
MsG0480020726.01.T02 MTR_6g087120 32.051 156 70 8 29 180 87 210 3.04e-12 64.3
MsG0480020726.01.T02 MTR_3g110185 29.936 157 70 7 31 181 562 684 2.32e-11 62.4
MsG0480020726.01.T01 MTR_4g057685 96.859 191 1 1 1 191 1 186 5.21e-138 383
MsG0480020726.01.T01 MTR_4g057685 96.859 191 1 1 1 191 49 234 1.34e-137 384
MsG0480020726.01.T01 MTR_8g102980 32.692 156 69 7 29 180 86 209 1.47e-15 73.9
MsG0480020726.01.T01 MTR_8g102980 32.692 156 69 7 29 180 86 209 1.58e-15 73.6
MsG0480020726.01.T01 MTR_4g132270 28.662 157 80 5 29 183 16 142 1.76e-13 67.4
MsG0480020726.01.T01 MTR_4g132270 28.662 157 80 5 29 183 39 165 2.14e-13 67.4
MsG0480020726.01.T01 MTR_4g132260 29.936 157 78 6 29 183 16 142 2.50e-13 67.0
MsG0480020726.01.T01 MTR_2g023500 29.870 154 76 6 31 182 24 147 2.43e-12 64.3
MsG0480020726.01.T01 MTR_6g087120 32.051 156 70 8 29 180 87 210 3.04e-12 64.3
MsG0480020726.01.T01 MTR_3g110185 29.936 157 70 7 31 181 562 684 2.32e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020726.01.T02 AT1G08110 79.894 189 33 1 3 191 2 185 4.80e-107 305
MsG0480020726.01.T02 AT1G08110 79.894 189 33 1 3 191 2 185 4.80e-107 305
MsG0480020726.01.T02 AT1G08110 79.894 189 33 1 3 191 2 185 4.80e-107 305
MsG0480020726.01.T02 AT1G08110 79.894 189 33 1 3 191 52 235 1.90e-106 305
MsG0480020726.01.T02 AT1G67280 34.615 156 66 7 29 180 1 124 2.94e-16 74.7
MsG0480020726.01.T02 AT1G67280 34.615 156 66 7 29 180 89 212 6.21e-16 75.1
MsG0480020726.01.T02 AT1G11840 32.468 154 68 7 31 180 20 141 2.73e-14 68.9
MsG0480020726.01.T02 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T02 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T02 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T02 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T02 AT1G11840 32.468 154 68 7 31 180 59 180 6.39e-14 68.9
MsG0480020726.01.T01 AT1G08110 79.894 189 33 1 3 191 2 185 4.80e-107 305
MsG0480020726.01.T01 AT1G08110 79.894 189 33 1 3 191 2 185 4.80e-107 305
MsG0480020726.01.T01 AT1G08110 79.894 189 33 1 3 191 2 185 4.80e-107 305
MsG0480020726.01.T01 AT1G08110 79.894 189 33 1 3 191 52 235 1.90e-106 305
MsG0480020726.01.T01 AT1G67280 34.615 156 66 7 29 180 1 124 2.94e-16 74.7
MsG0480020726.01.T01 AT1G67280 34.615 156 66 7 29 180 89 212 6.21e-16 75.1
MsG0480020726.01.T01 AT1G11840 32.468 154 68 7 31 180 20 141 2.73e-14 68.9
MsG0480020726.01.T01 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T01 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T01 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T01 AT1G11840 32.468 154 68 7 31 180 20 141 5.40e-14 68.9
MsG0480020726.01.T01 AT1G11840 32.468 154 68 7 31 180 59 180 6.39e-14 68.9

Find 40 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACATGATATGATATTTAA+AGG 0.215830 4:+47044921 None:intergenic
CATCTCGTTGCAGATATAAT+CGG 0.322327 4:-47045641 MsG0480020726.01.T01:three_prime_UTR
AAAACACAGTTCACACAAAA+AGG 0.338856 4:+47045419 None:intergenic
TTAGTGCATGTTTGGATTGA+TGG 0.340389 4:-47045328 MsG0480020726.01.T01:intron
GAGAGGAAGAGGTTGGTGTT+TGG 0.346220 4:+47054305 None:intergenic
GCATCCGGTTAGTGCATGTT+TGG 0.370009 4:-47045336 MsG0480020726.01.T01:intron
GAACCTTTGTGAGAGAGAAA+TGG 0.374001 4:+47054259 None:intergenic
GGGAGAGTGGTGAGTGGAGG+AGG 0.384518 4:+47054448 None:intergenic
GAAAGGAAGTGTATAGTAGA+AGG 0.393446 4:+47054345 None:intergenic
AGAGGAGAGAGGAGAGGAAG+AGG 0.397027 4:+47054294 None:intergenic
AATTATTCATTCTTCCTTGA+GGG 0.412632 4:+47045561 None:intergenic
GGATGCATTGTCAAAACAAA+TGG 0.429635 4:+47045353 None:intergenic
ATGTTTGGTTGATAAAATTA+CGG 0.440888 4:+47045224 None:intergenic
CAATCCAAACATGCACTAAC+CGG 0.443186 4:+47045332 None:intergenic
ACTACTTGCCTTGTAAGTCT+TGG 0.448114 4:-47045597 MsG0480020726.01.T01:three_prime_UTR
AACCTTTGTGAGAGAGAAAT+GGG 0.459554 4:+47054260 None:intergenic
GAGAGAGGAGAGGAAGAGGT+TGG 0.475237 4:+47054298 None:intergenic
ATCTCGTTGCAGATATAATC+GGG 0.480483 4:-47045640 MsG0480020726.01.T01:three_prime_UTR
TGACTGTGTCTGCAGTCAAT+TGG 0.482137 4:-47045453 MsG0480020726.01.T01:intron
CGATGAATCGAAGACGAGAA+AGG 0.519494 4:+47054328 None:intergenic
CGAGGGAGAGTGGTGAGTGG+AGG 0.534563 4:+47054445 None:intergenic
AAATGGGAAGGGATTGAAAG+AGG 0.538715 4:+47054276 None:intergenic
TTAAGAGTTGTCAAAGCGTA+AGG 0.539672 4:+47045390 None:intergenic
GTAGTCGAAGCAGAATGTTA+AGG 0.543475 4:-47045537 MsG0480020726.01.T01:three_prime_UTR
AAGAAGTACCAAGACTTACA+AGG 0.550339 4:+47045589 None:intergenic
AGAGTCTCGGCGAGGGAGAG+TGG 0.551766 4:+47054435 None:intergenic
GAAGATGAGAGTCTCGGCGA+GGG 0.563701 4:+47054428 None:intergenic
TTCCCATTTCTCTCTCACAA+AGG 0.566022 4:-47054262 MsG0480020726.01.T01:intron
AAATTATTCATTCTTCCTTG+AGG 0.566531 4:+47045560 None:intergenic
AAGGGATTGAAAGAGGAGAG+AGG 0.571330 4:+47054283 None:intergenic
GTACTTCTTCAACTCCCTCA+AGG 0.575130 4:-47045575 MsG0480020726.01.T01:three_prime_UTR
CTCTCATCTTCAAAATCACA+AGG 0.581280 4:-47054416 MsG0480020726.01.T01:five_prime_UTR
CGGCGAGGGAGAGTGGTGAG+TGG 0.586034 4:+47054442 None:intergenic
TCTACTATATACTGATTACA+AGG 0.594713 4:+47045479 None:intergenic
TTGTGAGAGAGAAATGGGAA+GGG 0.605485 4:+47054265 None:intergenic
TGGTAAGATTGATATAATCA+TGG 0.611286 4:-47045308 MsG0480020726.01.T01:intron
ATTGAAAGAGGAGAGAGGAG+AGG 0.613587 4:+47054288 None:intergenic
TTTGTGAGAGAGAAATGGGA+AGG 0.618152 4:+47054264 None:intergenic
AGGCAAGTAGTCAAGCACAT+TGG 0.628564 4:+47045609 None:intergenic
TGAAGATGAGAGTCTCGGCG+AGG 0.666845 4:+47054427 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAAAAATTTAATA+AGG - Chr4:47049147-47049166 MsG0480020726.01.T01:intron 0.0%
!! TATAAATAAAAGTTAATTAC+AGG + Chr4:47049546-47049565 None:intergenic 10.0%
!!! ATTAAAATTAAATGTGTTTT+TGG + Chr4:47053470-47053489 None:intergenic 10.0%
!!! CTTTTAAAATAAAAATCAAA+CGG - Chr4:47049123-47049142 MsG0480020726.01.T01:intron 10.0%
!!! GGTATAATAATTTTAAATTT+AGG + Chr4:47047951-47047970 None:intergenic 10.0%
!!! GTTTGATTTTTATTTTAAAA+GGG + Chr4:47049124-47049143 None:intergenic 10.0%
!!! TACATTTTGTTTTTAAATTA+CGG - Chr4:47051007-47051026 MsG0480020726.01.T01:intron 10.0%
!!! TTTTTAAAGTAATAGTTTAA+AGG + Chr4:47049349-47049368 None:intergenic 10.0%
!! AAAACATGTATAAGTAAATT+AGG + Chr4:47052321-47052340 None:intergenic 15.0%
!! AAATAAAAGAAAATTACTAC+AGG - Chr4:47047694-47047713 MsG0480020726.01.T01:intron 15.0%
!! AATAAAAGAAAATTACTACA+GGG - Chr4:47047695-47047714 MsG0480020726.01.T01:intron 15.0%
!! TAACATGATATGATATTTAA+AGG + Chr4:47054445-47054464 None:intergenic 15.0%
!! TTATGATATATAATCTCTTT+AGG - Chr4:47047902-47047921 MsG0480020726.01.T01:intron 15.0%
!!! AAAGAAAAAATTTAGAGTTA+TGG - Chr4:47049273-47049292 MsG0480020726.01.T01:intron 15.0%
!!! AACTCTAAATTTTTTCTTTT+CGG + Chr4:47049272-47049291 None:intergenic 15.0%
!!! AAGAAAAAATTTAGAGTTAT+GGG - Chr4:47049274-47049293 MsG0480020726.01.T01:intron 15.0%
!!! AATTAATAAAGTAGTTTTGA+TGG + Chr4:47053211-47053230 None:intergenic 15.0%
!!! ATATAGAAATTGATTTTGAT+GGG - Chr4:47051994-47052013 MsG0480020726.01.T01:intron 15.0%
!!! CATTTTTATAGATTTTTCAA+GGG - Chr4:47050009-47050028 MsG0480020726.01.T01:intron 15.0%
!!! CGTTTGATTTTTATTTTAAA+AGG + Chr4:47049125-47049144 None:intergenic 15.0%
!! AACTTATTTATTTGCATAAG+AGG - Chr4:47045625-47045644 MsG0480020726.01.T01:three_prime_UTR 20.0%
!! AAGATGAGAAAAAAAATTGT+AGG - Chr4:47053411-47053430 MsG0480020726.01.T01:intron 20.0%
!! AAGTTAATCTCTAATATGAA+AGG - Chr4:47050547-47050566 MsG0480020726.01.T01:intron 20.0%
!! AATAATAATAGAGAAAACAG+AGG - Chr4:47048605-47048624 MsG0480020726.01.T01:intron 20.0%
!! AATATACGAATGGAAAAAAA+AGG + Chr4:47045336-47045355 None:intergenic 20.0%
!! AATATGTGTAATTAATGCAT+TGG - Chr4:47046660-47046679 MsG0480020726.01.T01:intron 20.0%
!! AATGATAATAGAATAAGCAA+TGG - Chr4:47050343-47050362 MsG0480020726.01.T01:intron 20.0%
!! ACAAAATGAAAACAAAGTAA+AGG + Chr4:47047878-47047897 None:intergenic 20.0%
!! ACATTATATTCTCTAACATA+AGG - Chr4:47052365-47052384 MsG0480020726.01.T01:intron 20.0%
!! AGATGAGAAAAAAAATTGTA+GGG - Chr4:47053412-47053431 MsG0480020726.01.T01:intron 20.0%
!! ATAAGAGAAACTATTAAGAA+AGG - Chr4:47047325-47047344 MsG0480020726.01.T01:intron 20.0%
!! ATATATCCAATAAATAACAG+TGG + Chr4:47049634-47049653 None:intergenic 20.0%
!! ATGAAAACAACAAATAAGTT+AGG - Chr4:47049303-47049322 MsG0480020726.01.T01:intron 20.0%
!! ATGCATATAACAAACTAATT+TGG + Chr4:47052465-47052484 None:intergenic 20.0%
!! ATGCTTATAACAAACTAATT+TGG + Chr4:47052495-47052514 None:intergenic 20.0%
!! ATGTATAAGTAAATTAGGTA+AGG + Chr4:47052316-47052335 None:intergenic 20.0%
!! ATGTTAGAGAATATAATGTA+AGG + Chr4:47052364-47052383 None:intergenic 20.0%
!! CCTTGAAAAATCTATAAAAA+TGG + Chr4:47050011-47050030 None:intergenic 20.0%
!! GGTAGTTTATGAAAAAAAAA+AGG - Chr4:47045554-47045573 MsG0480020726.01.T01:three_prime_UTR 20.0%
!! TAAAGTAATATACAGTAACT+GGG - Chr4:47047043-47047062 MsG0480020726.01.T01:intron 20.0%
!! TACTAAAAAAACATAACAGA+TGG + Chr4:47049961-47049980 None:intergenic 20.0%
!! TATTGTACTTTGTTAGATTA+AGG - Chr4:47052614-47052633 MsG0480020726.01.T01:intron 20.0%
!! TCAGTATGACTTATAATTAA+TGG + Chr4:47048968-47048987 None:intergenic 20.0%
!! TCCATTAAAATAAAACTACT+CGG + Chr4:47046842-47046861 None:intergenic 20.0%
!! TGAAAACAACAAATAAGTTA+GGG - Chr4:47049304-47049323 MsG0480020726.01.T01:intron 20.0%
!! TGATTTAATATTATGTTTGC+TGG - Chr4:47048092-47048111 MsG0480020726.01.T01:intron 20.0%
!! TGATTTAATGAATGATAGAA+AGG - Chr4:47051477-47051496 MsG0480020726.01.T01:intron 20.0%
!! TGGAATTATAAATATACGAA+TGG + Chr4:47045346-47045365 None:intergenic 20.0%
!! TGTATAAGTAAATTAGGTAA+GGG + Chr4:47052315-47052334 None:intergenic 20.0%
!! TTAACTCATTATATAGCATA+TGG + Chr4:47053298-47053317 None:intergenic 20.0%
!! TTCATTATGAAATGAAAACT+AGG + Chr4:47049519-47049538 None:intergenic 20.0%
!! TTGAAATCAAATGACTTAAT+AGG - Chr4:47050304-47050323 MsG0480020726.01.T01:intron 20.0%
!! TTTAATAATCCGTAATATAC+AGG - Chr4:47046066-47046085 MsG0480020726.01.T01:intron 20.0%
!! TTTGTTTCCAATCAATAAAA+TGG + Chr4:47054226-47054245 None:intergenic 20.0%
!!! AAAACAATTTGACTGTATTT+TGG + Chr4:47045693-47045712 None:intergenic 20.0%
!!! AACTAAAACAGTGTTTTATA+TGG + Chr4:47053334-47053353 None:intergenic 20.0%
!!! AGAAATATTGTAGTAGTTTT+GGG + Chr4:47052708-47052727 None:intergenic 20.0%
!!! AGAGTATTTGTAATAAAGAT+TGG - Chr4:47054192-47054211 MsG0480020726.01.T01:intron 20.0%
!!! ATATAAACAGAGAGTATAAA+GGG - Chr4:47048521-47048540 MsG0480020726.01.T01:intron 20.0%
!!! ATGTTTGGTTGATAAAATTA+CGG + Chr4:47054142-47054161 None:intergenic 20.0%
!!! ATTATGTCTATCAACATTTT+TGG + Chr4:47049468-47049487 None:intergenic 20.0%
!!! CATATAGAAATTGATTTTGA+TGG - Chr4:47051993-47052012 MsG0480020726.01.T01:intron 20.0%
!!! CATTTGTTATAAAATCTTCA+TGG - Chr4:47053682-47053701 MsG0480020726.01.T01:intron 20.0%
!!! CATTTTTTAAGACCTTTAAA+TGG - Chr4:47046627-47046646 MsG0480020726.01.T01:intron 20.0%
!!! CCATTTTTATAGATTTTTCA+AGG - Chr4:47050008-47050027 MsG0480020726.01.T01:intron 20.0%
!!! CGAAAAAGTTTTTTAAAAAG+AGG + Chr4:47050259-47050278 None:intergenic 20.0%
!!! CTTATTTGTTGTTTTCATTT+TGG + Chr4:47049301-47049320 None:intergenic 20.0%
!!! CTTTTAGAACTTTATTTTGA+TGG - Chr4:47052031-47052050 MsG0480020726.01.T01:intron 20.0%
!!! TAATTTTAATACAAGTCACT+TGG - Chr4:47053480-47053499 MsG0480020726.01.T01:intron 20.0%
!!! TACTTTTCTTTTCTAAATCA+CGG + Chr4:47051136-47051155 None:intergenic 20.0%
!!! TATATATAGTTGGTCTTATT+TGG + Chr4:47054249-47054268 None:intergenic 20.0%
!!! TATGAAATAACTTCTTCTTT+TGG - Chr4:47046706-47046725 MsG0480020726.01.T01:intron 20.0%
!!! TCAAAGCAAATTTTATCAAA+GGG + Chr4:47051742-47051761 None:intergenic 20.0%
!!! TCTAGAATCAAGTTAAAAAA+AGG + Chr4:47049823-47049842 None:intergenic 20.0%
!!! TTATGTCTATCAACATTTTT+GGG + Chr4:47049467-47049486 None:intergenic 20.0%
!!! TTCAAAGCAAATTTTATCAA+AGG + Chr4:47051743-47051762 None:intergenic 20.0%
!!! TTCAATTTATTTGTTTTTGC+AGG - Chr4:47052148-47052167 MsG0480020726.01.T01:intron 20.0%
!!! TTTTCATAGTTACCATTTAA+AGG + Chr4:47046642-47046661 None:intergenic 20.0%
!!! TTTTGGTTATTATAAAATCG+CGG + Chr4:47053453-47053472 None:intergenic 20.0%
! AAAACAATTGGAAATGTAAC+AGG - Chr4:47052235-47052254 MsG0480020726.01.T01:intron 25.0%
! AAACAATAGACAAACTAACA+GGG - Chr4:47051761-47051780 MsG0480020726.01.T01:intron 25.0%
! AAACATGTGCTTATATAAGT+GGG + Chr4:47052811-47052830 None:intergenic 25.0%
! AAAGTAATATACAGTAACTG+GGG - Chr4:47047044-47047063 MsG0480020726.01.T01:intron 25.0%
! AAATTATTCATTCTTCCTTG+AGG + Chr4:47053806-47053825 None:intergenic 25.0%
! AACAGAAAAAGTTTATTCTC+TGG - Chr4:47053181-47053200 MsG0480020726.01.T01:intron 25.0%
! AAGCAAAAAAACAGAGAAAA+AGG - Chr4:47048558-47048577 MsG0480020726.01.T01:intron 25.0%
! AATAAACTTAGAACATGAAG+AGG + Chr4:47045152-47045171 None:intergenic 25.0%
! AATAAAGACAATCTTACTTC+AGG + Chr4:47052550-47052569 None:intergenic 25.0%
! AATTATTCATTCTTCCTTGA+GGG + Chr4:47053805-47053824 None:intergenic 25.0%
! AATTTGAATCAATCTTCATC+TGG + Chr4:47051649-47051668 None:intergenic 25.0%
! ACTGATTAATAATAGTGATG+AGG + Chr4:47049413-47049432 None:intergenic 25.0%
! ACTTATATAAGCACATGTTT+AGG - Chr4:47052811-47052830 MsG0480020726.01.T01:intron 25.0%
! ACTTTGATATATGATGTTGA+TGG + Chr4:47050658-47050677 None:intergenic 25.0%
! ATAAAAATCAAGGCTAACTT+TGG + Chr4:47046269-47046288 None:intergenic 25.0%
! ATAAAAGATAAATGACCTGT+TGG - Chr4:47045467-47045486 MsG0480020726.01.T01:three_prime_UTR 25.0%
! ATAAAGACAATCTTACTTCA+GGG + Chr4:47052549-47052568 None:intergenic 25.0%
! ATATAATCTCTTTAGGCTTA+TGG - Chr4:47047909-47047928 MsG0480020726.01.T01:intron 25.0%
! ATCAGTCATTTCCTTATATA+CGG - Chr4:47047810-47047829 MsG0480020726.01.T01:intron 25.0%
! ATTTGACAGTTTCTGTTTAA+AGG + Chr4:47048308-47048327 None:intergenic 25.0%
! CAAAAATAAGCTAAACCAAA+CGG - Chr4:47045665-47045684 MsG0480020726.01.T01:intron 25.0%
! CATCAAAATAGAAAATCATG+TGG + Chr4:47052681-47052700 None:intergenic 25.0%
! CATCATATGATACAAATCAA+TGG + Chr4:47047533-47047552 None:intergenic 25.0%
! CATTAGCAGTTAACATTAAA+GGG + Chr4:47052095-47052114 None:intergenic 25.0%
! CCATTAAAATAAAACTACTC+GGG + Chr4:47046841-47046860 None:intergenic 25.0%
! CTGTAATGACATTGTTAATT+AGG - Chr4:47047458-47047477 MsG0480020726.01.T01:intron 25.0%
! GAAAACAACAAATAAGTTAG+GGG - Chr4:47049305-47049324 MsG0480020726.01.T01:intron 25.0%
! GAGAAAATTCAAACAAAATC+AGG + Chr4:47046367-47046386 None:intergenic 25.0%
! GAGATTGGTAAAAGAAAAAT+TGG + Chr4:47047659-47047678 None:intergenic 25.0%
! GATATGCATTATTCTAAGTT+CGG - Chr4:47048806-47048825 MsG0480020726.01.T01:intron 25.0%
! GTAAAGTAATATACAGTAAC+TGG - Chr4:47047042-47047061 MsG0480020726.01.T01:intron 25.0%
! TAAAAATCAAGGCTAACTTT+GGG + Chr4:47046268-47046287 None:intergenic 25.0%
! TAAACATGTGCTTATATAAG+TGG + Chr4:47052812-47052831 None:intergenic 25.0%
! TAACATATGAAGTATGAACA+TGG + Chr4:47046803-47046822 None:intergenic 25.0%
! TATATATAGGTGAACAAGTT+GGG - Chr4:47051507-47051526 MsG0480020726.01.T01:intron 25.0%
! TCACGTGTATGAAAAAAAAA+AGG + Chr4:47048261-47048280 None:intergenic 25.0%
! TCAGTATGATTTACAATTCA+TGG + Chr4:47048889-47048908 None:intergenic 25.0%
! TGGTAAGATTGATATAATCA+TGG - Chr4:47054055-47054074 MsG0480020726.01.T01:intron 25.0%
! TTAAACAGAAACTGTCAAAT+TGG - Chr4:47048308-47048327 MsG0480020726.01.T01:intron 25.0%
! TTAAATATCTTCGATGAGAT+TGG + Chr4:47047674-47047693 None:intergenic 25.0%
! TTAACCATAAATGTGTAAAG+TGG + Chr4:47049201-47049220 None:intergenic 25.0%
! TTAACTTACTAATGATCCAA+GGG + Chr4:47052589-47052608 None:intergenic 25.0%
! TTAGTTGAATTGAGTTCTAT+TGG + Chr4:47054364-47054383 None:intergenic 25.0%
! TTGACTCTGTTATATATAGT+TGG + Chr4:47054259-47054278 None:intergenic 25.0%
! TTGTAACACTTATATTCTGT+TGG - Chr4:47046332-47046351 MsG0480020726.01.T01:intron 25.0%
! TTTAATGAATGATAGAAAGG+AGG - Chr4:47051480-47051499 MsG0480020726.01.T01:intron 25.0%
! TTTGAAAATCTGTAACAAAC+AGG + Chr4:47045839-47045858 None:intergenic 25.0%
!! AATATTTTCTGTAACCAAGT+AGG - Chr4:47053238-47053257 MsG0480020726.01.T01:intron 25.0%
!! ACTTACGTTTAATCTAAAGT+TGG - Chr4:47052652-47052671 MsG0480020726.01.T01:intron 25.0%
!! ATACAGTCCATTTTATTGAT+TGG - Chr4:47054216-47054235 MsG0480020726.01.T01:intron 25.0%
!! ATGATTTTTCCATTTTACTC+TGG - Chr4:47049490-47049509 MsG0480020726.01.T01:intron 25.0%
!! ATGTTTACAAGAGTTGATTA+AGG - Chr4:47050813-47050832 MsG0480020726.01.T01:intron 25.0%
!! ATTTGAGATCTAGATTGTTA+GGG + Chr4:47051370-47051389 None:intergenic 25.0%
!! GAGAAATATTGTAGTAGTTT+TGG + Chr4:47052709-47052728 None:intergenic 25.0%
!! GATATAAACAGAGAGTATAA+AGG - Chr4:47048520-47048539 MsG0480020726.01.T01:intron 25.0%
!! GGATTGGCAATATAAATTTA+GGG - Chr4:47046580-47046599 MsG0480020726.01.T01:intron 25.0%
!! GTGTTATTCATTACCTTATT+GGG - Chr4:47049656-47049675 MsG0480020726.01.T01:intron 25.0%
!! TAAAAATGGATTTCATCATG+TGG + Chr4:47049997-47050016 None:intergenic 25.0%
!! TATGTCTATCAACATTTTTG+GGG + Chr4:47049466-47049485 None:intergenic 25.0%
!! TCTACTATATACTGATTACA+AGG + Chr4:47053887-47053906 None:intergenic 25.0%
!! TGATAGTGATTTCTTGTTTA+AGG + Chr4:47050484-47050503 None:intergenic 25.0%
!! TGTGTTATTCATTACCTTAT+TGG - Chr4:47049655-47049674 MsG0480020726.01.T01:intron 25.0%
!! TTACATTTCCAATTGTTTTC+CGG + Chr4:47052234-47052253 None:intergenic 25.0%
!! TTTTTGCAGGAAAAATGAAA+GGG - Chr4:47052161-47052180 MsG0480020726.01.T01:intron 25.0%
!!! AAAGACTTTAAGAGTGTTTT+TGG - Chr4:47051450-47051469 MsG0480020726.01.T01:intron 25.0%
!!! ATATATGATGTTGATGGATT+AGG + Chr4:47050652-47050671 None:intergenic 25.0%
!!! CACATGATTTTCTATTTTGA+TGG - Chr4:47052679-47052698 MsG0480020726.01.T01:intron 25.0%
!!! GTCAAATTGGTTTTTGTAAA+TGG - Chr4:47048321-47048340 MsG0480020726.01.T01:intron 25.0%
!!! GTTTGGTTTGAAATAGTTAT+TGG + Chr4:47050457-47050476 None:intergenic 25.0%
!!! TATATGATTTGTTTCCTACT+TGG - Chr4:47049935-47049954 MsG0480020726.01.T01:intron 25.0%
!!! TGAAATAGTTATTGGTTTTG+TGG + Chr4:47050449-47050468 None:intergenic 25.0%
!!! TGGATTGGCAATATAAATTT+AGG - Chr4:47046579-47046598 MsG0480020726.01.T01:intron 25.0%
!!! TTCGTTCTGTTATGTTTTTT+TGG - Chr4:47051827-47051846 MsG0480020726.01.T01:intron 25.0%
!!! TTTTTCTCTGTTTTTTTGCT+TGG + Chr4:47048559-47048578 None:intergenic 25.0%
AAAAAATAAGCCAATCCAAC+AGG + Chr4:47045485-47045504 None:intergenic 30.0%
AAAAATCAAGGCTAACTTTG+GGG + Chr4:47046267-47046286 None:intergenic 30.0%
AAAACACAGTTCACACAAAA+AGG + Chr4:47053947-47053966 None:intergenic 30.0%
AAACGCGAGAATAAAAATCA+AGG + Chr4:47046279-47046298 None:intergenic 30.0%
AAATCACGGTCTATATAACA+TGG + Chr4:47051122-47051141 None:intergenic 30.0%
AAATCTTTCACATGCTTTGA+AGG + Chr4:47049757-47049776 None:intergenic 30.0%
AACATGTGCTTATATAAGTG+GGG + Chr4:47052810-47052829 None:intergenic 30.0%
AACTTAGCACCTGTATATTA+CGG + Chr4:47046078-47046097 None:intergenic 30.0%
AAGAGAACATGGATTTATAG+AGG - Chr4:47050706-47050725 MsG0480020726.01.T01:intron 30.0%
AAGTTCAGCTTGTACTTTAT+GGG - Chr4:47046458-47046477 MsG0480020726.01.T01:intron 30.0%
ACACTGATGATTCAAATCAA+AGG + Chr4:47051557-47051576 None:intergenic 30.0%
ACATAGCAAAGAAGATTTCT+TGG + Chr4:47051219-47051238 None:intergenic 30.0%
AGAAAAAGGAAGAAAAACAG+AGG - Chr4:47048572-47048591 MsG0480020726.01.T01:intron 30.0%
AGAGTAAGAAAAAGAGAACA+TGG - Chr4:47050695-47050714 MsG0480020726.01.T01:intron 30.0%
AGGTCTATAGATTAATGAGT+TGG - Chr4:47047345-47047364 MsG0480020726.01.T01:intron 30.0%
AGTAAATTAGGTAAGGGAAT+TGG + Chr4:47052309-47052328 None:intergenic 30.0%
AGTAAGTCCTCATCAAATTA+AGG - Chr4:47050162-47050181 MsG0480020726.01.T01:intron 30.0%
ATATAAACCAAAGATGCAAG+TGG - Chr4:47052515-47052534 MsG0480020726.01.T01:intron 30.0%
ATCGATGAAAAGCGATTAAT+TGG + Chr4:47045129-47045148 None:intergenic 30.0%
ATGGTTAAAGTTAACAGACT+CGG - Chr4:47049213-47049232 MsG0480020726.01.T01:intron 30.0%
ATGTAAGGAAATGTTTATGC+TGG + Chr4:47053521-47053540 None:intergenic 30.0%
ATTTCAAAGAGCTTGAAGAT+TGG + Chr4:47050903-47050922 None:intergenic 30.0%
CAACAATGTTCTTGACAATT+AGG - Chr4:47050587-47050606 MsG0480020726.01.T01:intron 30.0%
CAATGTAATAGTTGTATACG+AGG - Chr4:47048926-47048945 MsG0480020726.01.T01:intron 30.0%
CATAGCAAAGAAGATTTCTT+GGG + Chr4:47051218-47051237 None:intergenic 30.0%
CATATATGAATTGCACGATT+CGG - Chr4:47047611-47047630 MsG0480020726.01.T01:intron 30.0%
CATGGTGATTCATAAATTGA+AGG + Chr4:47050841-47050860 None:intergenic 30.0%
CCATTAGCAGTTAACATTAA+AGG + Chr4:47052096-47052115 None:intergenic 30.0%
CCTTTAATGTTAACTGCTAA+TGG - Chr4:47052093-47052112 MsG0480020726.01.T01:intron 30.0%
CTAACACTACACACTTTATT+TGG - Chr4:47047847-47047866 MsG0480020726.01.T01:intron 30.0%
CTAACTCAAAACTACAAAAC+CGG - Chr4:47052984-47053003 MsG0480020726.01.T01:intron 30.0%
CTATAGGATAATTGTAAGCT+TGG + Chr4:47051345-47051364 None:intergenic 30.0%
CTATATATAGGTGAACAAGT+TGG - Chr4:47051506-47051525 MsG0480020726.01.T01:intron 30.0%
GAAACAATAGACAAACTAAC+AGG - Chr4:47051760-47051779 MsG0480020726.01.T01:intron 30.0%
GAAAGGAGGAAACTATATAT+AGG - Chr4:47051494-47051513 MsG0480020726.01.T01:intron 30.0%
GAAAGGGATAGCATTTATTA+AGG - Chr4:47052177-47052196 MsG0480020726.01.T01:intron 30.0%
GACTTGTAGATTATGTAGTA+AGG - Chr4:47047247-47047266 MsG0480020726.01.T01:intron 30.0%
GATATACATAATTCAGCACA+CGG + Chr4:47052422-47052441 None:intergenic 30.0%
GCAAACAATAACAGTCATAA+GGG + Chr4:47046190-47046209 None:intergenic 30.0%
GGCACAATAACAATTCAAAT+TGG - Chr4:47050364-47050383 MsG0480020726.01.T01:intron 30.0%
GTACTTTGTTAGATTAAGGA+TGG - Chr4:47052618-47052637 MsG0480020726.01.T01:intron 30.0%
GTTAACTTACTAATGATCCA+AGG + Chr4:47052590-47052609 None:intergenic 30.0%
TAAAAACGAGGAACTTAACA+CGG - Chr4:47048458-47048477 MsG0480020726.01.T01:intron 30.0%
TAACAATTCAAATTGGAACC+AGG - Chr4:47050371-47050390 MsG0480020726.01.T01:intron 30.0%
TAATTCCACTTATGCATGTT+TGG - Chr4:47045358-47045377 MsG0480020726.01.T01:intron 30.0%
TAGAAACATGGTTAAGAGTT+AGG - Chr4:47050098-47050117 MsG0480020726.01.T01:intron 30.0%
TATCATACCAAAACCAACTA+AGG + Chr4:47048790-47048809 None:intergenic 30.0%
TCACAATTCAGAAGTTAGTT+TGG - Chr4:47048042-47048061 MsG0480020726.01.T01:intron 30.0%
TCAGTCATTTCCTTATATAC+GGG - Chr4:47047811-47047830 MsG0480020726.01.T01:intron 30.0%
TCCCAAACTAACAGAAATTA+CGG - Chr4:47053379-47053398 MsG0480020726.01.T01:intron 30.0%
TGATCCACTTTACACATTTA+TGG - Chr4:47049194-47049213 MsG0480020726.01.T01:intron 30.0%
TGCAAACAATAACAGTCATA+AGG + Chr4:47046191-47046210 None:intergenic 30.0%
TTAATCCAAACATGCATAAG+TGG + Chr4:47045366-47045385 None:intergenic 30.0%
TTACATAGTGTAGAAGGTTT+AGG + Chr4:47050866-47050885 None:intergenic 30.0%
TTATTCTAAGTTCGGTTTCT+AGG - Chr4:47048814-47048833 MsG0480020726.01.T01:intron 30.0%
TTCATATATTGTTGGAGTCT+TGG - Chr4:47048168-47048187 MsG0480020726.01.T01:intron 30.0%
TTCTTGCGTTCATATATTGT+TGG - Chr4:47048160-47048179 MsG0480020726.01.T01:intron 30.0%
TTCTTGGGAAAGAAGATTAA+GGG + Chr4:47051203-47051222 None:intergenic 30.0%
TTGGTAAGTGATATCTCATT+TGG - Chr4:47047126-47047145 MsG0480020726.01.T01:CDS 30.0%
TTGTAAATGGTGAATTTAGC+AGG - Chr4:47048334-47048353 MsG0480020726.01.T01:intron 30.0%
TTGTATGAAACCCGTATATA+AGG + Chr4:47047824-47047843 None:intergenic 30.0%
TTTAAGTAGTGTGAAACTTG+AGG - Chr4:47050061-47050080 MsG0480020726.01.T01:intron 30.0%
TTTAATAGCATGTAGAGACT+CGG - Chr4:47047196-47047215 MsG0480020726.01.T01:CDS 30.0%
TTTAGGCTTATGGTTAAGTT+TGG - Chr4:47047919-47047938 MsG0480020726.01.T01:intron 30.0%
TTTCTTGGGAAAGAAGATTA+AGG + Chr4:47051204-47051223 None:intergenic 30.0%
! AAGTCTTTTACCATTAAGTG+GGG + Chr4:47047424-47047443 None:intergenic 30.0%
! ACATAAGCCTTAATTTGATG+AGG + Chr4:47050172-47050191 None:intergenic 30.0%
! ACTGGATTGAAATTTTTGAC+CGG - Chr4:47052212-47052231 MsG0480020726.01.T01:intron 30.0%
! AGATACTATTTTCGTTAGTG+AGG - Chr4:47045583-47045602 MsG0480020726.01.T01:three_prime_UTR 30.0%
! AGTAAGGAGAGTATATTAGA+TGG - Chr4:47047263-47047282 MsG0480020726.01.T01:intron 30.0%
! ATTCAAGGATCTAAAGCAAA+AGG + Chr4:47051318-47051337 None:intergenic 30.0%
! ATTTTTGACCGGAAAACAAT+TGG - Chr4:47052223-47052242 MsG0480020726.01.T01:intron 30.0%
! CAAGTCTTTTACCATTAAGT+GGG + Chr4:47047425-47047444 None:intergenic 30.0%
! CTACACTCAAAAGTGTAAAT+GGG - Chr4:47048756-47048775 MsG0480020726.01.T01:intron 30.0%
! GATTTGAGATCTAGATTGTT+AGG + Chr4:47051371-47051390 None:intergenic 30.0%
! GATTTTTATTCTCGCGTTTT+GGG - Chr4:47046280-47046299 MsG0480020726.01.T01:intron 30.0%
! GGAATCTAATTCTAGAAACA+TGG - Chr4:47050086-47050105 MsG0480020726.01.T01:intron 30.0%
! GTGATTTCTTGTTTAAGGTT+AGG + Chr4:47050479-47050498 None:intergenic 30.0%
! GTTTTTGCAGGAAAAATGAA+AGG - Chr4:47052160-47052179 MsG0480020726.01.T01:intron 30.0%
! TAACCACTTGTTAGAGTATT+TGG + Chr4:47046117-47046136 None:intergenic 30.0%
! TCAAGTCTTTTACCATTAAG+TGG + Chr4:47047426-47047445 None:intergenic 30.0%
! TCGATTTCGATTTTTCTCAA+TGG - Chr4:47045213-47045232 MsG0480020726.01.T01:intron 30.0%
! TCTCTTCCACTGTTATTTAT+TGG - Chr4:47049625-47049644 MsG0480020726.01.T01:CDS 30.0%
! TGATTTTTATTCTCGCGTTT+TGG - Chr4:47046279-47046298 MsG0480020726.01.T01:intron 30.0%
! TTCTTGTTTAAGGTTAGGTT+TGG + Chr4:47050474-47050493 None:intergenic 30.0%
!! AACATTTCCTTAGTTGGTTT+TGG - Chr4:47048780-47048799 MsG0480020726.01.T01:intron 30.0%
!! ATCTTCAAGCTCTTTGAAAT+TGG - Chr4:47050903-47050922 MsG0480020726.01.T01:intron 30.0%
!! ATTTTAACATGCAAGTAACC+TGG + Chr4:47052393-47052412 None:intergenic 30.0%
!! GAAGTTTTATAGAATGACAG+TGG - Chr4:47054112-47054131 MsG0480020726.01.T01:CDS 30.0%
!! GTTTAGTTTGCTTAAGAGAT+TGG - Chr4:47046421-47046440 MsG0480020726.01.T01:intron 30.0%
!! TGTGTTTGTTACAGTTTTCT+CGG - Chr4:47045780-47045799 MsG0480020726.01.T01:intron 30.0%
!! TTCTATTAGGGATGTCATTT+TGG - Chr4:47051967-47051986 MsG0480020726.01.T01:intron 30.0%
!!! AAAAAACTTTTTCGAAAGCG+TGG - Chr4:47050265-47050284 MsG0480020726.01.T01:intron 30.0%
!!! ATCTTTCAAGATGGTTTTGT+AGG + Chr4:47052778-47052797 None:intergenic 30.0%
!!! ATTTGTTTTGACAATGCATC+CGG - Chr4:47054012-47054031 MsG0480020726.01.T01:intron 30.0%
!!! CCCGAGTAGTTTTATTTTAA+TGG - Chr4:47046838-47046857 MsG0480020726.01.T01:intron 30.0%
!!! TTTTGGTTCTACTCTGTTTA+TGG - Chr4:47051844-47051863 MsG0480020726.01.T01:intron 30.0%
AAAAATCGAAATCGACGAGT+CGG + Chr4:47045208-47045227 None:intergenic 35.0%
AAACATGGTTAAGAGTTAGG+AGG - Chr4:47050101-47050120 MsG0480020726.01.T01:intron 35.0%
AAAGGTCTTAAAAAATGCCC+CGG + Chr4:47046624-47046643 None:intergenic 35.0%
AAAGTGATCCAGAGTTCAAA+GGG - Chr4:47047072-47047091 MsG0480020726.01.T01:intron 35.0%
AAATGAATGTAGTGCTTGCT+TGG + Chr4:47047972-47047991 None:intergenic 35.0%
AACAGAGCAAGAACACAAAT+AGG + Chr4:47051949-47051968 None:intergenic 35.0%
AACCTTTGTGAGAGAGAAAT+GGG + Chr4:47045106-47045125 None:intergenic 35.0%
AACTGTAGATGAAGCTACTA+AGG - Chr4:47045285-47045304 MsG0480020726.01.T01:intron 35.0%
AATAAACCTGCTTCATCCAA+CGG - Chr4:47049074-47049093 MsG0480020726.01.T01:intron 35.0%
ACAGTAAGCTGATTAGAACT+AGG - Chr4:47052736-47052755 MsG0480020726.01.T01:intron 35.0%
ACATGTGCTTATATAAGTGG+GGG + Chr4:47052809-47052828 None:intergenic 35.0%
ACCCGTAATTTCTGTTAGTT+TGG + Chr4:47053384-47053403 None:intergenic 35.0%
ACGATTGAATTGACACAGTA+AGG - Chr4:47046966-47046985 MsG0480020726.01.T01:intron 35.0%
ACTCGGACTTAATTGACTAA+CGG - Chr4:47049230-47049249 MsG0480020726.01.T01:intron 35.0%
ACTGTAGATGAAGCTACTAA+GGG - Chr4:47045286-47045305 MsG0480020726.01.T01:intron 35.0%
ACTTAACACGGTTCATAAGT+AGG - Chr4:47048470-47048489 MsG0480020726.01.T01:intron 35.0%
AGAGTATAAAGGGAAAACAG+AGG - Chr4:47048531-47048550 MsG0480020726.01.T01:intron 35.0%
AGAGTATATTAGATGGATGG+AGG - Chr4:47047270-47047289 MsG0480020726.01.T01:intron 35.0%
AGATAAATGACCTGTTGGAT+TGG - Chr4:47045472-47045491 MsG0480020726.01.T01:three_prime_UTR 35.0%
AGTTCAGCTTGTACTTTATG+GGG - Chr4:47046459-47046478 MsG0480020726.01.T01:intron 35.0%
ATCAAAGCCTATTCATGATC+CGG + Chr4:47052940-47052959 None:intergenic 35.0%
ATCATTCTCTTGCACATACA+AGG + Chr4:47053094-47053113 None:intergenic 35.0%
ATCTAGATCTCAAATCCCAT+AGG - Chr4:47051375-47051394 MsG0480020726.01.T01:intron 35.0%
ATCTCGTTGCAGATATAATC+GGG - Chr4:47053723-47053742 MsG0480020726.01.T01:intron 35.0%
ATGGGAAACATTTCCTTAGT+TGG - Chr4:47048774-47048793 MsG0480020726.01.T01:intron 35.0%
ATGTGAAAGATTTCAGAACC+TGG - Chr4:47049764-47049783 MsG0480020726.01.T01:intron 35.0%
ATTACCTTATTGGGATAGCT+AGG - Chr4:47049665-47049684 MsG0480020726.01.T01:intron 35.0%
ATTCTCTAACATAAGGAACC+AGG - Chr4:47052372-47052391 MsG0480020726.01.T01:intron 35.0%
ATTTCAATCCAGTATCCATC+AGG + Chr4:47052205-47052224 None:intergenic 35.0%
CAAAACCATCTTGAAAGATG+AGG - Chr4:47052779-47052798 MsG0480020726.01.T01:intron 35.0%
CAAACATGCACTCAATATCT+TGG - Chr4:47054155-47054174 MsG0480020726.01.T01:five_prime_UTR 35.0%
CAAGATATTGAGTGCATGTT+TGG + Chr4:47054157-47054176 None:intergenic 35.0%
CAATGTGTCCTGTAAACATA+AGG + Chr4:47049716-47049735 None:intergenic 35.0%
CAGTAAGCTGATTAGAACTA+GGG - Chr4:47052737-47052756 MsG0480020726.01.T01:intron 35.0%
CATCTCGTTGCAGATATAAT+CGG - Chr4:47053722-47053741 MsG0480020726.01.T01:intron 35.0%
CCACTTATAAACACCTATTG+AGG - Chr4:47053025-47053044 MsG0480020726.01.T01:intron 35.0%
CCCAAACTAACAGAAATTAC+GGG - Chr4:47053380-47053399 MsG0480020726.01.T01:intron 35.0%
CCTCAATAGGTGTTTATAAG+TGG + Chr4:47053028-47053047 None:intergenic 35.0%
CGAATCGTGCAATTCATATA+TGG + Chr4:47047613-47047632 None:intergenic 35.0%
CTATAACTTAAACAGCAAGC+AGG + Chr4:47049378-47049397 None:intergenic 35.0%
CTCTCATCTTCAAAATCACA+AGG - Chr4:47044947-47044966 MsG0480020726.01.T01:three_prime_UTR 35.0%
CTTATGTTTACAGGACACAT+TGG - Chr4:47049714-47049733 MsG0480020726.01.T01:intron 35.0%
GAAAATCTGTAACAAACAGG+TGG + Chr4:47045836-47045855 None:intergenic 35.0%
GAAGTTCAGCTTGTACTTTA+TGG - Chr4:47046457-47046476 MsG0480020726.01.T01:intron 35.0%
GAATGAGATAAGACCTCAAT+AGG + Chr4:47053041-47053060 None:intergenic 35.0%
GAATTGAGTTCTATTGGACT+GGG + Chr4:47054358-47054377 None:intergenic 35.0%
GAGAAGAAGAACAGAACAAT+TGG + Chr4:47051894-47051913 None:intergenic 35.0%
GAGTATATTAGATGGATGGA+GGG - Chr4:47047271-47047290 MsG0480020726.01.T01:intron 35.0%
GATGAAGATGAAGAAGAAGA+AGG - Chr4:47048992-47049011 MsG0480020726.01.T01:intron 35.0%
GCATTTATTAAGGATCCTGA+TGG - Chr4:47052187-47052206 MsG0480020726.01.T01:intron 35.0%
GCTTATGTATCAGTTACTGT+TGG - Chr4:47050184-47050203 MsG0480020726.01.T01:intron 35.0%
GGATGCATTGTCAAAACAAA+TGG + Chr4:47054013-47054032 None:intergenic 35.0%
GGGTGCTTTATAAACTAACA+GGG - Chr4:47051781-47051800 MsG0480020726.01.T01:intron 35.0%
GTAAGGAAAACATTACCTGA+AGG + Chr4:47052347-47052366 None:intergenic 35.0%
GTATCATGATTCAGATCTCA+CGG - Chr4:47047488-47047507 MsG0480020726.01.T01:intron 35.0%
GTTCTTGCTCTGTTCTATTA+GGG - Chr4:47051955-47051974 MsG0480020726.01.T01:intron 35.0%
GTTTGTCAAGAGTCTCAAAT+TGG + Chr4:47053067-47053086 None:intergenic 35.0%
TAAAGGCTTGATTGAACCTT+TGG + Chr4:47049332-47049351 None:intergenic 35.0%
TAAGATAAACAAACCCCTTC+AGG - Chr4:47052268-47052287 MsG0480020726.01.T01:CDS 35.0%
TCCTATTAGGTTACCGTTAT+CGG + Chr4:47052908-47052927 None:intergenic 35.0%
TCTTATGATTCTACGTCCAA+CGG + Chr4:47048710-47048729 None:intergenic 35.0%
TGAATTGAGTTCTATTGGAC+TGG + Chr4:47054359-47054378 None:intergenic 35.0%
TGTAAGCTTGGTTTCATTCA+AGG + Chr4:47051333-47051352 None:intergenic 35.0%
TGTGAAAGATTTCAGAACCT+GGG - Chr4:47049765-47049784 MsG0480020726.01.T01:intron 35.0%
TGTTATCCATAAGCTAGTCA+AGG - Chr4:47045533-47045552 MsG0480020726.01.T01:three_prime_UTR 35.0%
TGTTCTTGCTCTGTTCTATT+AGG - Chr4:47051954-47051973 MsG0480020726.01.T01:intron 35.0%
TTAAGAGTTGTCAAAGCGTA+AGG + Chr4:47053976-47053995 None:intergenic 35.0%
TTAGTGCATGTTTGGATTGA+TGG - Chr4:47054035-47054054 MsG0480020726.01.T01:intron 35.0%
TTCTGCTTGATCTGTACTTT+AGG - Chr4:47051922-47051941 MsG0480020726.01.T01:intron 35.0%
TTTGTTAAGAAACCAGAGGA+TGG - Chr4:47049795-47049814 MsG0480020726.01.T01:intron 35.0%
! AAAAAAGTACATCCACGTGA+AGG + Chr4:47049604-47049623 None:intergenic 35.0%
! AAATGGATTTCATCATGTGG+AGG + Chr4:47049994-47050013 None:intergenic 35.0%
! AAGAAGATTAAGGGTGTGTT+TGG + Chr4:47051194-47051213 None:intergenic 35.0%
! ACTAACGGAGGTATATTTGA+GGG - Chr4:47049245-47049264 MsG0480020726.01.T01:intron 35.0%
! ACTCTTTCTAAGAACACCTA+TGG + Chr4:47051394-47051413 None:intergenic 35.0%
! AGAGTATTTGGTCGAGTTTA+TGG + Chr4:47046105-47046124 None:intergenic 35.0%
! AGGAGAGTATATTAGATGGA+TGG - Chr4:47047267-47047286 MsG0480020726.01.T01:intron 35.0%
! AGGGTGCTTTATAAACTAAC+AGG - Chr4:47051780-47051799 MsG0480020726.01.T01:intron 35.0%
! ATTTTTCTCAATGGCTGCTT+CGG - Chr4:47045222-47045241 MsG0480020726.01.T01:intron 35.0%
! CCCGTAATTTCTGTTAGTTT+GGG + Chr4:47053383-47053402 None:intergenic 35.0%
! CTCTTTCTAAGAACACCTAT+GGG + Chr4:47051393-47051412 None:intergenic 35.0%
! GAAAGCTAACGACAATTTTG+TGG - Chr4:47046395-47046414 MsG0480020726.01.T01:intron 35.0%
! GAAAGGAAGTGTATAGTAGA+AGG + Chr4:47045021-47045040 None:intergenic 35.0%
! GCTACACTCAAAAGTGTAAA+TGG - Chr4:47048755-47048774 MsG0480020726.01.T01:intron 35.0%
! TAGGTTGTTGATAGAGTTGA+GGG - Chr4:47048498-47048517 MsG0480020726.01.T01:intron 35.0%
! TATACATGTTTTGTGCCTTC+AGG - Chr4:47052329-47052348 MsG0480020726.01.T01:intron 35.0%
! TATCGTTGCTTTCGTCATAT+CGG + Chr4:47050210-47050229 None:intergenic 35.0%
! TGGAAATCCCTGATTTGAAT+CGG + Chr4:47051629-47051648 None:intergenic 35.0%
! TTGGTGCTTATTTGATGACT+TGG - Chr4:47048187-47048206 MsG0480020726.01.T01:intron 35.0%
! TTTTCATACACGTGACACAA+TGG - Chr4:47048266-47048285 MsG0480020726.01.T01:intron 35.0%
!! AAACTACCTTGACTAGCTTA+TGG + Chr4:47045542-47045561 None:intergenic 35.0%
!! AAGAAGTACCAAGACTTACA+AGG + Chr4:47053777-47053796 None:intergenic 35.0%
!! AGTTTTGTGAAGCAAGTTAC+TGG - Chr4:47046528-47046547 MsG0480020726.01.T01:intron 35.0%
!! ATGAACACCGATTCAAATCA+GGG - Chr4:47051619-47051638 MsG0480020726.01.T01:intron 35.0%
!! GAGCCGTTGGAATTTTAAAA+GGG + Chr4:47049102-47049121 None:intergenic 35.0%
!! GATTTTGAAGATGAGAGTCT+CGG + Chr4:47044944-47044963 None:intergenic 35.0%
!! GCTGCATCTTTTTCTTGTTT+AGG - Chr4:47046881-47046900 MsG0480020726.01.T01:intron 35.0%
!! TAAAAAAAGGTACCATCCTC+TGG + Chr4:47049810-47049829 None:intergenic 35.0%
!! TATGAACACCGATTCAAATC+AGG - Chr4:47051618-47051637 MsG0480020726.01.T01:intron 35.0%
!! TGAGTTTGTTAAGAAACCAG+AGG - Chr4:47049791-47049810 MsG0480020726.01.T01:intron 35.0%
!! TTGTCACGTTTGGATTAGTT+TGG + Chr4:47054305-47054324 None:intergenic 35.0%
!!! ATGGTTTTGTAGGATAAGGT+GGG + Chr4:47052768-47052787 None:intergenic 35.0%
!!! CAAGATGGTTTTGTAGGATA+AGG + Chr4:47052772-47052791 None:intergenic 35.0%
!!! CGGTTTTGTAGTTTTGAGTT+AGG + Chr4:47052986-47053005 None:intergenic 35.0%
!!! GAGTTAGGAGGTATGTTTTT+TGG - Chr4:47050113-47050132 MsG0480020726.01.T01:intron 35.0%
!!! GCTCCCTTTTAAAATTCCAA+CGG - Chr4:47049096-47049115 MsG0480020726.01.T01:intron 35.0%
!!! TTATTTTAAAAGGGAGCCGT+TGG + Chr4:47049115-47049134 None:intergenic 35.0%
AAACTACAGTCTCTACCTGA+AGG + Chr4:47052286-47052305 None:intergenic 40.0%
AAAGCAACGATAAGCTAGAG+GGG - Chr4:47050218-47050237 MsG0480020726.01.T01:intron 40.0%
AAATGGGAAGGGATTGAAAG+AGG + Chr4:47045090-47045109 None:intergenic 40.0%
AACATAACAGATGGCCAAGT+AGG + Chr4:47049952-47049971 None:intergenic 40.0%
AACTACAGTCTCTACCTGAA+GGG + Chr4:47052285-47052304 None:intergenic 40.0%
AACTCGCCAATGGTTAATTC+TGG + Chr4:47053150-47053169 None:intergenic 40.0%
AAGCTAGCATGCAATCCTTT+AGG - Chr4:47050949-47050968 MsG0480020726.01.T01:intron 40.0%
AAGGTCTTAAAAAATGCCCC+GGG + Chr4:47046623-47046642 None:intergenic 40.0%
AATTCTTAAATTGTGCCCCG+GGG - Chr4:47046729-47046748 MsG0480020726.01.T01:intron 40.0%
ACAACTTATGCGAGCACTTA+TGG - Chr4:47050139-47050158 MsG0480020726.01.T01:intron 40.0%
ACACGGTTCATAAGTAGGAT+CGG - Chr4:47048475-47048494 MsG0480020726.01.T01:intron 40.0%
ACTAACAGAAATTACGGGTG+AGG - Chr4:47053385-47053404 MsG0480020726.01.T01:intron 40.0%
ACTACAGGGAAAAAAGCTGT+TGG - Chr4:47047709-47047728 MsG0480020726.01.T01:intron 40.0%
ACTACTTGCCTTGTAAGTCT+TGG - Chr4:47053766-47053785 MsG0480020726.01.T01:intron 40.0%
ACTAGGTCACCAGAGTAAAA+TGG + Chr4:47049502-47049521 None:intergenic 40.0%
ACTTTATGGGGTATGAGGTA+TGG - Chr4:47046471-47046490 MsG0480020726.01.T01:intron 40.0%
AGAAGAAAACGCCTCTTCTA+CGG - Chr4:47050769-47050788 MsG0480020726.01.T01:intron 40.0%
AGCTAGCATGCAATCCTTTA+GGG - Chr4:47050950-47050969 MsG0480020726.01.T01:intron 40.0%
AGTAGTGTGAAACTTGAGGA+TGG - Chr4:47050065-47050084 MsG0480020726.01.T01:intron 40.0%
AGTTTGGACCTTTGCTCAAA+AGG - Chr4:47046941-47046960 MsG0480020726.01.T01:intron 40.0%
ATATAGCTGACCCCACTTAA+TGG - Chr4:47047411-47047430 MsG0480020726.01.T01:intron 40.0%
ATCGAGATCCTATGTAGGAT+CGG - Chr4:47048417-47048436 MsG0480020726.01.T01:intron 40.0%
ATTCGAATCCATCTCCTTAC+AGG - Chr4:47051681-47051700 MsG0480020726.01.T01:intron 40.0%
CAAATAAGTTAGGGGACCAA+AGG - Chr4:47049313-47049332 MsG0480020726.01.T01:intron 40.0%
CAATCCAAACATGCACTAAC+CGG + Chr4:47054034-47054053 None:intergenic 40.0%
CCAAACAATTGAGGTTGAAG+GGG + Chr4:47051254-47051273 None:intergenic 40.0%
CCCAAACAATTGAGGTTGAA+GGG + Chr4:47051255-47051274 None:intergenic 40.0%
CCCTTCAACCTCAATTGTTT+GGG - Chr4:47051252-47051271 MsG0480020726.01.T01:intron 40.0%
CCTATTAGGTTACCGTTATC+GGG + Chr4:47052907-47052926 None:intergenic 40.0%
CGAACTTGTGATGTATTCAC+AGG - Chr4:47053124-47053143 MsG0480020726.01.T01:intron 40.0%
CGACCAAATACTCTAACAAG+TGG - Chr4:47046111-47046130 MsG0480020726.01.T01:intron 40.0%
CTACAGGGAAAAAAGCTGTT+GGG - Chr4:47047710-47047729 MsG0480020726.01.T01:intron 40.0%
CTAGGCGACTGAATTCTAAT+AGG - Chr4:47049683-47049702 MsG0480020726.01.T01:intron 40.0%
CTAGTATTAGTCCGTAGAAG+AGG + Chr4:47050783-47050802 None:intergenic 40.0%
CTTGTACTTTATGGGGTATG+AGG - Chr4:47046466-47046485 MsG0480020726.01.T01:intron 40.0%
GAAAGCAACGATAAGCTAGA+GGG - Chr4:47050217-47050236 MsG0480020726.01.T01:intron 40.0%
GAAAGTGATCCAGAGTTCAA+AGG - Chr4:47047071-47047090 MsG0480020726.01.T01:intron 40.0%
GAACCTTTGTGAGAGAGAAA+TGG + Chr4:47045107-47045126 None:intergenic 40.0%
GAAGTCGTCCTTATGTTTAC+AGG - Chr4:47049705-47049724 MsG0480020726.01.T01:intron 40.0%
GAATTCTTAAATTGTGCCCC+GGG - Chr4:47046728-47046747 MsG0480020726.01.T01:intron 40.0%
GACATTCCAGCTAGAAAGAA+TGG + Chr4:47053271-47053290 None:intergenic 40.0%
GAGTGGTTACATAGTGTAGA+AGG + Chr4:47050872-47050891 None:intergenic 40.0%
GCGAAAAACACAGGAAATAG+AGG - Chr4:47048635-47048654 MsG0480020726.01.T01:intron 40.0%
GGAAAAACAGCGAAAAACAC+AGG - Chr4:47048626-47048645 MsG0480020726.01.T01:intron 40.0%
GGAATTCTTAAATTGTGCCC+CGG - Chr4:47046727-47046746 MsG0480020726.01.T01:intron 40.0%
GTAGTCGAAGCAGAATGTTA+AGG - Chr4:47053826-47053845 MsG0480020726.01.T01:intron 40.0%
GTTCTATCAACCGAGTTACT+TGG + Chr4:47046921-47046940 None:intergenic 40.0%
TACAAGCTGAACTTCATCTC+AGG + Chr4:47046452-47046471 None:intergenic 40.0%
TACAGGGAAAAAAGCTGTTG+GGG - Chr4:47047711-47047730 MsG0480020726.01.T01:intron 40.0%
TAGCTTCATCTACAGTTGCA+TGG + Chr4:47045282-47045301 None:intergenic 40.0%
TATCACTTACCAAAACCACG+AGG + Chr4:47047119-47047138 None:intergenic 40.0%
TATTGCCAATCCAACGCATA+TGG + Chr4:47046572-47046591 None:intergenic 40.0%
TCAAAGAGCTTGAAGATTGG+AGG + Chr4:47050900-47050919 None:intergenic 40.0%
TCACCTCCAAAGGTAATTGT+GGG + Chr4:47051286-47051305 None:intergenic 40.0%
TCCCAAACAATTGAGGTTGA+AGG + Chr4:47051256-47051275 None:intergenic 40.0%
TCTCTTGCACATACAAGGTA+AGG + Chr4:47053089-47053108 None:intergenic 40.0%
TCTTAACAAACTCAACTCCC+AGG + Chr4:47049785-47049804 None:intergenic 40.0%
TGTGTTAAGAGGTCTCACAT+TGG + Chr4:47052848-47052867 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + Chr4:47051180-47051199 None:intergenic 40.0%
TTAGTTTCATGTCCTTCACG+TGG - Chr4:47049589-47049608 MsG0480020726.01.T01:CDS 40.0%
TTCACCTCCAAAGGTAATTG+TGG + Chr4:47051287-47051306 None:intergenic 40.0%
TTCCCATTTCTCTCTCACAA+AGG - Chr4:47045101-47045120 MsG0480020726.01.T01:intron 40.0%
TTCGGAATCAAAGGAATCAC+CGG - Chr4:47045240-47045259 MsG0480020726.01.T01:intron 40.0%
TTGAAATTGGATGAATCCCG+AGG - Chr4:47050916-47050935 MsG0480020726.01.T01:intron 40.0%
TTGTGAGAGAGAAATGGGAA+GGG + Chr4:47045101-47045120 None:intergenic 40.0%
TTGTGATACCCTTTGAACTC+TGG + Chr4:47047083-47047102 None:intergenic 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + Chr4:47051176-47051195 None:intergenic 40.0%
TTTGTGAGAGAGAAATGGGA+AGG + Chr4:47045102-47045121 None:intergenic 40.0%
! AATCGTAGCCTTTTGAGCAA+AGG + Chr4:47046952-47046971 None:intergenic 40.0%
! AATTCTGATCCTCGTGGTTT+TGG - Chr4:47047107-47047126 MsG0480020726.01.T01:intron 40.0%
! ATATGAATTGCACGATTCGG+TGG - Chr4:47047614-47047633 MsG0480020726.01.T01:intron 40.0%
! ATCTGAAGCTCCAAGTAACT+CGG - Chr4:47046908-47046927 MsG0480020726.01.T01:intron 40.0%
! CAGGTGGAAACTTCTAAAAG+TGG + Chr4:47045820-47045839 None:intergenic 40.0%
! CTAGATTGTTAGGGTGCTAT+AGG + Chr4:47051361-47051380 None:intergenic 40.0%
! GACTAACGGAGGTATATTTG+AGG - Chr4:47049244-47049263 MsG0480020726.01.T01:intron 40.0%
! GATAACGGTAACCTAATAGG+AGG - Chr4:47052907-47052926 MsG0480020726.01.T01:CDS 40.0%
! GGAGAAAGAGCGATTTTACA+TGG + Chr4:47052444-47052463 None:intergenic 40.0%
! GGAGCCGTTGGAATTTTAAA+AGG + Chr4:47049103-47049122 None:intergenic 40.0%
! GGTTGTTTCCCAAACAATTG+AGG + Chr4:47051263-47051282 None:intergenic 40.0%
! GTAGGTTGTTGATAGAGTTG+AGG - Chr4:47048497-47048516 MsG0480020726.01.T01:intron 40.0%
! GTGTAGAAGGTTTAGGATCA+TGG + Chr4:47050859-47050878 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + Chr4:47051186-47051205 None:intergenic 40.0%
! TGATGATGCGCACATATGTA+AGG + Chr4:47053536-47053555 None:intergenic 40.0%
! TTAAGGATCCTGATGGATAC+TGG - Chr4:47052194-47052213 MsG0480020726.01.T01:intron 40.0%
! TTAAGGGTGTGTTTGGATTG+AGG + Chr4:47051187-47051206 None:intergenic 40.0%
! TTCTATTGGACTGGGTACAT+TGG + Chr4:47054350-47054369 None:intergenic 40.0%
! TTTGATGACTTGGAAGCTCA+TGG - Chr4:47048197-47048216 MsG0480020726.01.T01:intron 40.0%
!! AACTACAAAACCGGCTTGTA+AGG - Chr4:47052993-47053012 MsG0480020726.01.T01:intron 40.0%
!! ACTCGGTTGATAGAACAGTT+TGG - Chr4:47046925-47046944 MsG0480020726.01.T01:intron 40.0%
!! GAATTTTAAAAGGGAGCCGT+TGG + Chr4:47049093-47049112 None:intergenic 40.0%
!! GAGTTCAAAGGGTATCACAA+TGG - Chr4:47047083-47047102 MsG0480020726.01.T01:intron 40.0%
!! TGGTATGGAATGGTTTGCTT+TGG + Chr4:47054330-47054349 None:intergenic 40.0%
!! TTACACTTTTGAGTGTAGCC+AGG + Chr4:47048754-47048773 None:intergenic 40.0%
!!! GATGGTTTTGTAGGATAAGG+TGG + Chr4:47052769-47052788 None:intergenic 40.0%
!!! TGCTTTGGTTTTGTCACGTT+TGG + Chr4:47054315-47054334 None:intergenic 40.0%
AAAGCCTATTCATGATCCGG+TGG + Chr4:47052937-47052956 None:intergenic 45.0%
AACGGTAACCTAATAGGAGG+TGG - Chr4:47052910-47052929 MsG0480020726.01.T01:CDS 45.0%
AAGCAACGATAAGCTAGAGG+GGG - Chr4:47050219-47050238 MsG0480020726.01.T01:intron 45.0%
AAGCCTATTCATGATCCGGT+GGG + Chr4:47052936-47052955 None:intergenic 45.0%
AAGGGATTGAAAGAGGAGAG+AGG + Chr4:47045083-47045102 None:intergenic 45.0%
AATGGCAATTCTGATCCTCG+TGG - Chr4:47047101-47047120 MsG0480020726.01.T01:intron 45.0%
AATGGCTGCTTCGGAATCAA+AGG - Chr4:47045231-47045250 MsG0480020726.01.T01:intron 45.0%
ACAACCCCCACAATTACCTT+TGG - Chr4:47051277-47051296 MsG0480020726.01.T01:intron 45.0%
ACAGCTGAAGAGTGAATTCC+TGG + Chr4:47050392-47050411 None:intergenic 45.0%
ACCTCCAAAGGTAATTGTGG+GGG + Chr4:47051284-47051303 None:intergenic 45.0%
ACGCTCCAGATGTTCAAATC+TGG + Chr4:47052882-47052901 None:intergenic 45.0%
ACTACAGTCTCTACCTGAAG+GGG + Chr4:47052284-47052303 None:intergenic 45.0%
AGATCCTATGTAGGATCGGT+CGG - Chr4:47048421-47048440 MsG0480020726.01.T01:intron 45.0%
AGGCAAGTAGTCAAGCACAT+TGG + Chr4:47053757-47053776 None:intergenic 45.0%
AGGTCTTAAAAAATGCCCCG+GGG + Chr4:47046622-47046641 None:intergenic 45.0%
ATCAGAGTGAAGTCGAAGCA+CGG - Chr4:47048676-47048695 MsG0480020726.01.T01:intron 45.0%
ATGAGCCATATGCGTTGGAT+TGG - Chr4:47046564-47046583 MsG0480020726.01.T01:intron 45.0%
ATTCTTAAATTGTGCCCCGG+GGG - Chr4:47046730-47046749 MsG0480020726.01.T01:intron 45.0%
ATTGAAAGAGGAGAGAGGAG+AGG + Chr4:47045078-47045097 None:intergenic 45.0%
CACAGGCCAGAATTAACCAT+TGG - Chr4:47053141-47053160 MsG0480020726.01.T01:intron 45.0%
CACCTCCAAAGGTAATTGTG+GGG + Chr4:47051285-47051304 None:intergenic 45.0%
CACGACCAGATTTGAACATC+TGG - Chr4:47052874-47052893 MsG0480020726.01.T01:intron 45.0%
CCCCTTCAACCTCAATTGTT+TGG - Chr4:47051251-47051270 MsG0480020726.01.T01:intron 45.0%
CGAAAGCAACGATAAGCTAG+AGG - Chr4:47050216-47050235 MsG0480020726.01.T01:intron 45.0%
CGATGAATCGAAGACGAGAA+AGG + Chr4:47045038-47045057 None:intergenic 45.0%
CGGACTTAATTGACTAACGG+AGG - Chr4:47049233-47049252 MsG0480020726.01.T01:intron 45.0%
CTGGGTACATTGGTATGGAA+TGG + Chr4:47054340-47054359 None:intergenic 45.0%
GAACAAGTTGTGTAAGCCCT+TGG - Chr4:47052570-47052589 MsG0480020726.01.T01:intron 45.0%
GAGCTATCTACGAATGCTTG+TGG - Chr4:47045737-47045756 MsG0480020726.01.T01:intron 45.0%
GCAGTCCTCATCTTTCAAGA+TGG + Chr4:47052787-47052806 None:intergenic 45.0%
GGATTTCATCATGTGGAGGA+GGG + Chr4:47049990-47050009 None:intergenic 45.0%
GGTCTCACATTGGATGAGAA+CGG + Chr4:47052838-47052857 None:intergenic 45.0%
GGTGAAGGAACGTAAAAACG+AGG - Chr4:47048446-47048465 MsG0480020726.01.T01:intron 45.0%
GGTTCATAAGTAGGATCGGT+AGG - Chr4:47048479-47048498 MsG0480020726.01.T01:intron 45.0%
GTACTTCTTCAACTCCCTCA+AGG - Chr4:47053788-47053807 MsG0480020726.01.T01:intron 45.0%
GTCAGATCGAGATCCTATGT+AGG - Chr4:47048412-47048431 MsG0480020726.01.T01:intron 45.0%
GTCTCACATTGGATGAGAAC+GGG + Chr4:47052837-47052856 None:intergenic 45.0%
GTTCAAATCTGGTCGTGAGA+GGG + Chr4:47052871-47052890 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + Chr4:47051177-47051196 None:intergenic 45.0%
TATGCATGAGCCATATGCGT+TGG - Chr4:47046559-47046578 MsG0480020726.01.T01:intron 45.0%
TCCATCCAAACACACCCTAA+AGG + Chr4:47050967-47050986 None:intergenic 45.0%
TGACTGTGTCTGCAGTCAAT+TGG - Chr4:47053910-47053929 MsG0480020726.01.T01:intron 45.0%
TGGATTTCATCATGTGGAGG+AGG + Chr4:47049991-47050010 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - Chr4:47050973-47050992 MsG0480020726.01.T01:intron 45.0%
TGTTCAAATCTGGTCGTGAG+AGG + Chr4:47052872-47052891 None:intergenic 45.0%
TTAGGGTGTGTTTGGATGGA+GGG - Chr4:47050967-47050986 MsG0480020726.01.T01:intron 45.0%
TTCGAATCATTCATCCCCTC+AGG + Chr4:47051711-47051730 None:intergenic 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + Chr4:47051175-47051194 None:intergenic 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - Chr4:47050977-47050996 MsG0480020726.01.T01:intron 45.0%
! AGAATGGACTCACTCCTACT+TGG + Chr4:47053255-47053274 None:intergenic 45.0%
! AGCTTGAAGATTGGAGGCAT+TGG + Chr4:47050894-47050913 None:intergenic 45.0%
! CCCGATAACGGTAACCTAAT+AGG - Chr4:47052904-47052923 MsG0480020726.01.T01:CDS 45.0%
! GCGTTTTCTTCTACGAAGAG+CGG + Chr4:47050761-47050780 None:intergenic 45.0%
! GTGAGTCCATTCTTTCTAGC+TGG - Chr4:47053262-47053281 MsG0480020726.01.T01:intron 45.0%
! TTGGACTGGGTACATTGGTA+TGG + Chr4:47054345-47054364 None:intergenic 45.0%
! TTTAGGGTGTGTTTGGATGG+AGG - Chr4:47050966-47050985 MsG0480020726.01.T01:intron 45.0%
!! GCAATCCTTTAGGGTGTGTT+TGG - Chr4:47050959-47050978 MsG0480020726.01.T01:intron 45.0%
!! TCCTTTAGGGTGTGTTTGGA+TGG - Chr4:47050963-47050982 MsG0480020726.01.T01:intron 45.0%
!!! GACTGTATTTTGGCTCCGTT+TGG + Chr4:47045683-47045702 None:intergenic 45.0%
!!! AAAAAAATATTTTTGATAAT+TGG - Chr4:47045926-47045945 MsG0480020726.01.T01:intron 5.0%
AAATGTTAACGAGTGCCCCC+GGG - Chr4:47046603-47046622 MsG0480020726.01.T01:intron 50.0%
ACCCCCACAATTACCTTTGG+AGG - Chr4:47051280-47051299 MsG0480020726.01.T01:intron 50.0%
ACCCTTAGCGAGGACGATAT+GGG + Chr4:47050734-47050753 None:intergenic 50.0%
AGACTCGGCTTAGGTGGTTT+GGG - Chr4:47047211-47047230 MsG0480020726.01.T01:intron 50.0%
AGCATGTAGAGACTCGGCTT+AGG - Chr4:47047202-47047221 MsG0480020726.01.T01:intron 50.0%
ATGTAGAGACTCGGCTTAGG+TGG - Chr4:47047205-47047224 MsG0480020726.01.T01:intron 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + Chr4:47051171-47051190 None:intergenic 50.0%
CAGGTTGTCCTGTAAGGAGA+TGG + Chr4:47051692-47051711 None:intergenic 50.0%
CCATTGGCGAGTTTCTTACG+AGG - Chr4:47053157-47053176 MsG0480020726.01.T01:intron 50.0%
CCTCGTAAGAAACTCGCCAA+TGG + Chr4:47053160-47053179 None:intergenic 50.0%
CTACAGTTGCATGGAGACCA+GGG + Chr4:47045273-47045292 None:intergenic 50.0%
CTAGCTTGATCCGAACACCT+CGG + Chr4:47050936-47050955 None:intergenic 50.0%
CTCCTTACAGGACAACCTGA+GGG - Chr4:47051693-47051712 MsG0480020726.01.T01:intron 50.0%
GAAATGTTAACGAGTGCCCC+CGG - Chr4:47046602-47046621 MsG0480020726.01.T01:intron 50.0%
GATCCTATGTAGGATCGGTC+GGG - Chr4:47048422-47048441 MsG0480020726.01.T01:intron 50.0%
GCATCCGGTTAGTGCATGTT+TGG - Chr4:47054027-47054046 MsG0480020726.01.T01:intron 50.0%
GCTTGCTCCACTTGCATCTT+TGG + Chr4:47052525-47052544 None:intergenic 50.0%
GGTCTTAAAAAATGCCCCGG+GGG + Chr4:47046621-47046640 None:intergenic 50.0%
GTCGCCTAGCTATCCCAATA+AGG + Chr4:47049672-47049691 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - Chr4:47050976-47050995 MsG0480020726.01.T01:intron 50.0%
TACCCTTAGCGAGGACGATA+TGG + Chr4:47050735-47050754 None:intergenic 50.0%
TAGCTTGATCCGAACACCTC+GGG + Chr4:47050935-47050954 None:intergenic 50.0%
TCCCATATCGTCCTCGCTAA+GGG - Chr4:47050730-47050749 MsG0480020726.01.T01:intron 50.0%
TCCTTACAGGACAACCTGAG+GGG - Chr4:47051694-47051713 MsG0480020726.01.T01:intron 50.0%
TCTACAGTTGCATGGAGACC+AGG + Chr4:47045274-47045293 None:intergenic 50.0%
TCTCCTTACAGGACAACCTG+AGG - Chr4:47051692-47051711 MsG0480020726.01.T01:intron 50.0%
TGGGGTATGAGGTATGGCTA+TGG - Chr4:47046477-47046496 MsG0480020726.01.T01:intron 50.0%
TTCCCATATCGTCCTCGCTA+AGG - Chr4:47050729-47050748 MsG0480020726.01.T01:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + Chr4:47051170-47051189 None:intergenic 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - Chr4:47050978-47050997 MsG0480020726.01.T01:intron 50.0%
! TCGTGAGAGGGTGTGTTAAG+AGG + Chr4:47052859-47052878 None:intergenic 50.0%
! TGGATGAATCCCGAGGTGTT+CGG - Chr4:47050923-47050942 MsG0480020726.01.T01:intron 50.0%
!! GAAGATTGGAGGCATTGGAG+TGG + Chr4:47050889-47050908 None:intergenic 50.0%
!! GAGAGGAAGAGGTTGGTGTT+TGG + Chr4:47045061-47045080 None:intergenic 50.0%
!!! GAGCTGCTTTTCACCTCCAA+AGG + Chr4:47051296-47051315 None:intergenic 50.0%
AATGTTAACGAGTGCCCCCG+GGG - Chr4:47046604-47046623 MsG0480020726.01.T01:intron 55.0%
AGAGGAGAGAGGAGAGGAAG+AGG + Chr4:47045072-47045091 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+GGG - Chr4:47050982-47051001 MsG0480020726.01.T01:intron 55.0%
GAAGATGAGAGTCTCGGCGA+GGG + Chr4:47044938-47044957 None:intergenic 55.0%
GAGACTCGGCTTAGGTGGTT+TGG - Chr4:47047210-47047229 MsG0480020726.01.T01:intron 55.0%
GAGAGAGGAGAGGAAGAGGT+TGG + Chr4:47045068-47045087 None:intergenic 55.0%
GAGATCCTCGCCTTACAAGC+CGG + Chr4:47053006-47053025 None:intergenic 55.0%
GGTTGAAGGGGATCGAAGTG+AGG + Chr4:47051242-47051261 None:intergenic 55.0%
GTGAAGTCGAAGCACGGTTG+AGG - Chr4:47048682-47048701 MsG0480020726.01.T01:intron 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + Chr4:47046748-47046767 None:intergenic 55.0%
TGAAGATGAGAGTCTCGGCG+AGG + Chr4:47044939-47044958 None:intergenic 55.0%
TGGAGACCAGGGTTGTTAGC+CGG + Chr4:47045262-47045281 None:intergenic 55.0%
TGGCCCACCGGATCATGAAT+AGG - Chr4:47052930-47052949 MsG0480020726.01.T01:CDS 55.0%
! GAATCACCGGCTAACAACCC+TGG - Chr4:47045253-47045272 MsG0480020726.01.T01:intron 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + Chr4:47046749-47046768 None:intergenic 55.0%
! TCCCCTCAGGTTGTCCTGTA+AGG + Chr4:47051698-47051717 None:intergenic 55.0%
! TCTGGAGCGTGACCCGATAA+CGG - Chr4:47052892-47052911 MsG0480020726.01.T01:intron 55.0%
!! CAAAACCGGCTTGTAAGGCG+AGG - Chr4:47052998-47053017 MsG0480020726.01.T01:intron 55.0%
AGGGAGCCGTTGGATGAAGC+AGG + Chr4:47049083-47049102 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + Chr4:47051167-47051186 None:intergenic 60.0%
CCTAATAGGAGGTGGCCCAC+CGG - Chr4:47052918-47052937 MsG0480020726.01.T01:CDS 60.0%
CCTATGTAGGATCGGTCGGG+CGG - Chr4:47048425-47048444 MsG0480020726.01.T01:intron 60.0%
CTTGTTAACGAGTGCCCCCG+GGG + Chr4:47046747-47046766 None:intergenic 60.0%
GAGCGGATGTACCCTTAGCG+AGG + Chr4:47050744-47050763 None:intergenic 60.0%
GATGGAGGGTTTAGGAGGGG+AGG - Chr4:47050981-47051000 MsG0480020726.01.T01:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + Chr4:47051166-47051185 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + Chr4:47051165-47051184 None:intergenic 60.0%
GTGTAGCCAGGATCGAGTGC+TGG + Chr4:47048742-47048761 None:intergenic 60.0%
TACGAGCCAGCACTCGATCC+TGG - Chr4:47048733-47048752 MsG0480020726.01.T01:intron 60.0%
!! AAGCACGGTTGAGGTGCCGT+TGG - Chr4:47048691-47048710 MsG0480020726.01.T01:intron 60.0%
!! AGGATCGAGTGCTGGCTCGT+AGG + Chr4:47048734-47048753 None:intergenic 60.0%
AGAGTCTCGGCGAGGGAGAG+TGG + Chr4:47044931-47044950 None:intergenic 65.0%
CCGCCCGACCGATCCTACAT+AGG + Chr4:47048428-47048447 None:intergenic 65.0%
CCGGTGGGCCACCTCCTATT+AGG + Chr4:47052921-47052940 None:intergenic 65.0%
CGAGGGAGAGTGGTGAGTGG+AGG + Chr4:47044921-47044940 None:intergenic 65.0%
GGGAGAGTGGTGAGTGGAGG+AGG + Chr4:47044918-47044937 None:intergenic 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + Chr4:47051161-47051180 None:intergenic 65.0%
TAGGATCGGTCGGGCGGTGA+AGG - Chr4:47048431-47048450 MsG0480020726.01.T01:intron 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + Chr4:47051162-47051181 None:intergenic 65.0%
CGGCGAGGGAGAGTGGTGAG+TGG + Chr4:47044924-47044943 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 47044895 47054490 47044895 ID=MsG0480020726.01;Name=MsG0480020726.01
Chr4 mRNA 47044895 47054445 47044895 ID=MsG0480020726.01.T01;Parent=MsG0480020726.01;Name=MsG0480020726.01.T01;_AED=0.49;_eAED=0.49;_QI=216|0.88|0.9|1|0.66|0.6|10|337|191
Chr4 exon 47044895 47044995 47044895 ID=MsG0480020726.01.T01:exon:28142;Parent=MsG0480020726.01.T01
Chr4 exon 47045454 47045670 47045454 ID=MsG0480020726.01.T01:exon:28141;Parent=MsG0480020726.01.T01
Chr4 exon 47054263 47054445 47054263 ID=MsG0480020726.01.T01:exon:28133;Parent=MsG0480020726.01.T01
Chr4 five_prime_UTR 47054263 47054445 47054263 ID=MsG0480020726.01.T01:five_prime_utr;Parent=MsG0480020726.01.T01
Chr4 five_prime_UTR 47054154 47054186 47054154 ID=MsG0480020726.01.T01:five_prime_utr;Parent=MsG0480020726.01.T01
Chr4 CDS 47054058 47054153 47054058 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 CDS 47053077 47053138 47053077 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 CDS 47052898 47052958 47052898 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 CDS 47052403 47052482 47052403 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 CDS 47052257 47052342 47052257 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 CDS 47049569 47049658 47049569 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 CDS 47047115 47047215 47047115 ID=MsG0480020726.01.T01:cds;Parent=MsG0480020726.01.T01
Chr4 three_prime_UTR 47047096 47047114 47047096 ID=MsG0480020726.01.T01:three_prime_utr;Parent=MsG0480020726.01.T01
Chr4 three_prime_UTR 47045454 47045670 47045454 ID=MsG0480020726.01.T01:three_prime_utr;Parent=MsG0480020726.01.T01
Chr4 three_prime_UTR 47044895 47044995 47044895 ID=MsG0480020726.01.T01:three_prime_utr;Parent=MsG0480020726.01.T01
Chr4 mRNA 47045234 47054490 47045234 ID=MsG0480020726.01.T02;Parent=MsG0480020726.01;Name=MsG0480020726.01.T02;_AED=0.49;_eAED=0.49;_QI=107|0.87|0.88|1|0.75|0.66|9|436|191
Chr4 exon 47045234 47045650 47045234 ID=MsG0480020726.01.T02:exon:28144;Parent=MsG0480020726.01.T02
Chr4 exon 47054417 47054490 47054417 ID=MsG0480020726.01.T02:exon:28143;Parent=MsG0480020726.01.T02
Chr4 five_prime_UTR 47054417 47054490 47054417 ID=MsG0480020726.01.T02:five_prime_utr;Parent=MsG0480020726.01.T02
Chr4 five_prime_UTR 47054154 47054186 47054154 ID=MsG0480020726.01.T02:five_prime_utr;Parent=MsG0480020726.01.T02
Chr4 CDS 47054058 47054153 47054058 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 CDS 47053077 47053138 47053077 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 CDS 47052898 47052958 47052898 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 CDS 47052403 47052482 47052403 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 CDS 47052257 47052342 47052257 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 CDS 47049569 47049658 47049569 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 CDS 47047115 47047215 47047115 ID=MsG0480020726.01.T02:cds;Parent=MsG0480020726.01.T02
Chr4 three_prime_UTR 47047096 47047114 47047096 ID=MsG0480020726.01.T02:three_prime_utr;Parent=MsG0480020726.01.T02
Chr4 three_prime_UTR 47045234 47045650 47045234 ID=MsG0480020726.01.T02:three_prime_utr;Parent=MsG0480020726.01.T02
Gene Sequence

>MsG0480020726.01.T02

ATGGCTGCTTCGGAATCAAAGGAATCACCGGCTAACAACCCTGGTCTCCATGCAACTGTAGATGAAGCTACTAAGGGTTACTTCATGCAACAAACTATGTTCAGAATCAAAGACCCCAAAGTTAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCTGAGATGAAGTTCAGCTTGTACTTTATGGGGTATGAGGATACATCTGAAGCTCCAAGTAACTCGGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACGATTGAATTGACACATAAAGTAATATACAGTAACTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTATCACAATGGCAATTCTGATCCTCGTGGTTTTGGACACATTGGCATTACTGTTGATGACACCTTCAAAGCATGTGAAAGATTTCAGAACCTGGGAGTTGAGTTTGTTAAGAAACCAGAGGATGGAAAAATGAAAGGGATAGCATTTATTAAGGATCCTGATGGATACTGGATTGAAATTTTTGACCGGAAAACAATTGGAAATGTAACAGGAAGTGCTGCTTAA

>MsG0480020726.01.T01

ATGGCTGCTTCGGAATCAAAGGAATCACCGGCTAACAACCCTGGTCTCCATGCAACTGTAGATGAAGCTACTAAGGGTTACTTCATGCAACAAACTATGTTCAGAATCAAAGACCCCAAAGTTAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCTGAGATGAAGTTCAGCTTGTACTTTATGGGGTATGAGGATACATCTGAAGCTCCAAGTAACTCGGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACGATTGAATTGACACATAAAGTAATATACAGTAACTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTATCACAATGGCAATTCTGATCCTCGTGGTTTTGGACACATTGGCATTACTGTTGATGACACCTTCAAAGCATGTGAAAGATTTCAGAACCTGGGAGTTGAGTTTGTTAAGAAACCAGAGGATGGAAAAATGAAAGGGATAGCATTTATTAAGGATCCTGATGGATACTGGATTGAAATTTTTGACCGGAAAACAATTGGAAATGTAACAGGAAGTGCTGCTTAA

Protein sequence

>MsG0480020726.01.T02

MAASESKESPANNPGLHATVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQKATIELTHKVIYSNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTFKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTGSAA*

>MsG0480020726.01.T01

MAASESKESPANNPGLHATVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQKATIELTHKVIYSNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTFKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTGSAA*