Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096240 | XP_013463898.1 | 78.732 | 489 | 31 | 6 | 1 | 476 | 3 | 431 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096240 | sp|Q5ZMS6|TDRD3_CHICK | 31.937 | 191 | 117 | 3 | 15 | 204 | 9 | 187 | 5.48e-21 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096240 | A0A072V9B3 | 78.732 | 489 | 31 | 6 | 1 | 476 | 3 | 431 | 0.0 | 728 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0096240 | 0.816425 | 5.565909e-52 | -8.615850e-47 |
| Msa0020410 | Msa0096240 | 0.808580 | 2.887964e-50 | -8.615850e-47 |
| Msa0026430 | Msa0096240 | 0.814226 | 1.715756e-51 | -8.615850e-47 |
| Msa0026910 | Msa0096240 | 0.832180 | 1.095003e-55 | -8.615850e-47 |
| Msa0031180 | Msa0096240 | 0.814104 | 1.825691e-51 | -8.615850e-47 |
| Msa0036140 | Msa0096240 | 0.807141 | 5.843877e-50 | -8.615850e-47 |
| Msa0043980 | Msa0096240 | 0.830398 | 3.003702e-55 | -8.615850e-47 |
| Msa0051630 | Msa0096240 | 0.801568 | 8.470043e-49 | -8.615850e-47 |
| Msa0051750 | Msa0096240 | 0.818729 | 1.683781e-52 | -8.615850e-47 |
| Msa0053760 | Msa0096240 | 0.811478 | 6.861358e-51 | -8.615850e-47 |
| Msa0054480 | Msa0096240 | 0.809224 | 2.103289e-50 | -8.615850e-47 |
| Msa0054820 | Msa0096240 | 0.807998 | 3.842667e-50 | -8.615850e-47 |
| Msa0078480 | Msa0096240 | 0.800190 | 1.619113e-48 | -8.615850e-47 |
| Msa0083280 | Msa0096240 | 0.802754 | 4.828470e-49 | -8.615850e-47 |
| Msa0084080 | Msa0096240 | 0.825703 | 4.057183e-54 | -8.615850e-47 |
| Msa0090360 | Msa0096240 | 0.827423 | 1.577383e-54 | -8.615850e-47 |
| Msa0095560 | Msa0096240 | 0.831457 | 1.651233e-55 | -8.615850e-47 |
| Msa0096240 | Msa0099620 | 0.810352 | 1.202809e-50 | -8.615850e-47 |
| Msa0096240 | Msa0099650 | 0.807661 | 4.533076e-50 | -8.615850e-47 |
| Msa0096240 | Msa0100160 | 0.807910 | 4.012267e-50 | -8.615850e-47 |
| Msa0096240 | Msa0104800 | 0.800212 | 1.602436e-48 | -8.615850e-47 |
| Msa0096240 | Msa0114430 | 0.806471 | 8.096530e-50 | -8.615850e-47 |
| Msa0096240 | Msa0116080 | 0.814160 | 1.774987e-51 | -8.615850e-47 |
| Msa0096240 | Msa0122590 | 0.810330 | 1.215957e-50 | -8.615850e-47 |
| Msa0096240 | Msa0123300 | 0.805842 | 1.098022e-49 | -8.615850e-47 |
| Msa0096240 | Msa0131770 | 0.804445 | 2.152904e-49 | -8.615850e-47 |
| Msa0096240 | Msa0137840 | 0.820431 | 6.886130e-53 | -8.615850e-47 |
| Msa0096240 | Msa0138020 | 0.808624 | 2.826035e-50 | -8.615850e-47 |
| Msa0096240 | Msa0151180 | 0.824707 | 6.977013e-54 | -8.615850e-47 |
| Msa0096240 | Msa0166870 | 0.816690 | 4.856119e-52 | -8.615850e-47 |
| Msa0096240 | Msa0170570 | 0.820856 | 5.498375e-53 | -8.615850e-47 |
| Msa0096240 | Msa0171120 | 0.834535 | 2.833249e-56 | -8.615850e-47 |
| Msa0096240 | Msa0178570 | 0.810138 | 1.337565e-50 | -8.615850e-47 |
| Msa0096240 | Msa0183050 | 0.839254 | 1.768207e-57 | -8.615850e-47 |
| Msa0096240 | Msa0184040 | 0.828244 | 1.001148e-54 | -8.615850e-47 |
| Msa0096240 | Msa0206010 | 0.828565 | 8.375177e-55 | -8.615850e-47 |
| Msa0096240 | Msa0207030 | 0.824656 | 7.171715e-54 | -8.615850e-47 |
| Msa0096240 | Msa0207980 | 0.892185 | 2.003583e-74 | -8.615850e-47 |
| Msa0096240 | Msa0210450 | 0.821993 | 3.004283e-53 | -8.615850e-47 |
| Msa0096240 | Msa0213520 | 0.805349 | 1.393134e-49 | -8.615850e-47 |
| Msa0096240 | Msa0217680 | 0.804089 | 2.553658e-49 | -8.615850e-47 |
| Msa0096240 | Msa0220440 | 0.804283 | 2.326618e-49 | -8.615850e-47 |
| Msa0096240 | Msa0220580 | 0.808303 | 3.309115e-50 | -8.615850e-47 |
| Msa0096240 | Msa0223010 | 0.815397 | 9.443151e-52 | -8.615850e-47 |
| Msa0096240 | Msa0230680 | 0.800535 | 1.377234e-48 | -8.615850e-47 |
| Msa0096240 | Msa0238320 | 0.804067 | 2.580720e-49 | -8.615850e-47 |
| Msa0096240 | Msa0245940 | 0.817000 | 4.137747e-52 | -8.615850e-47 |
| Msa0096240 | Msa0249200 | 0.821877 | 3.195400e-53 | -8.615850e-47 |
| Msa0096240 | Msa0253200 | 0.810220 | 1.284465e-50 | -8.615850e-47 |
| Msa0096240 | Msa0259370 | 0.807624 | 4.615127e-50 | -8.615850e-47 |
| Msa0096240 | Msa0260780 | 0.801052 | 1.079803e-48 | -8.615850e-47 |
| Msa0096240 | Msa0261720 | 0.815310 | 9.872583e-52 | -8.615850e-47 |
| Msa0096240 | Msa0264780 | 0.808568 | 2.905904e-50 | -8.615850e-47 |
| Msa0096240 | Msa0285330 | 0.806466 | 8.116363e-50 | -8.615850e-47 |
| Msa0096240 | Msa0286670 | 0.818099 | 2.338651e-52 | -8.615850e-47 |
| Msa0096240 | Msa0287410 | 0.831239 | 1.868527e-55 | -8.615850e-47 |
| Msa0096240 | Msa0288120 | 0.804838 | 1.782304e-49 | -8.615850e-47 |
| Msa0096240 | Msa0292030 | 0.811158 | 8.050820e-51 | -8.615850e-47 |
| Msa0096240 | Msa0299580 | 0.809003 | 2.345116e-50 | -8.615850e-47 |
| Msa0096240 | Msa0308440 | 0.829627 | 4.630430e-55 | -8.615850e-47 |
| Msa0096240 | Msa0319170 | 0.807230 | 5.594771e-50 | -8.615850e-47 |
| Msa0096240 | Msa0326110 | 0.836883 | 7.207279e-57 | -8.615850e-47 |
| Msa0096240 | Msa0337060 | 0.803702 | 3.072956e-49 | -8.615850e-47 |
| Msa0096240 | Msa0346910 | 0.808885 | 2.485697e-50 | -8.615850e-47 |
| Msa0096240 | Msa0363790 | 0.811332 | 7.381331e-51 | -8.615850e-47 |
| Msa0096240 | Msa0373450 | 0.809884 | 1.517604e-50 | -8.615850e-47 |
| Msa0096240 | Msa0376910 | 0.829149 | 6.050290e-55 | -8.615850e-47 |
| Msa0096240 | Msa0390960 | 0.801960 | 7.034427e-49 | -8.615850e-47 |
| Msa0096240 | Msa0392270 | 0.813953 | 1.971363e-51 | -8.615850e-47 |
| Msa0096240 | Msa0422010 | 0.817491 | 3.208264e-52 | -8.615850e-47 |
| Msa0096240 | Msa0426900 | 0.834687 | 2.595600e-56 | -8.615850e-47 |
| Msa0096240 | Msa0433360 | 0.804241 | 2.373820e-49 | -8.615850e-47 |
| Msa0096240 | Msa0453200 | 0.800363 | 1.492462e-48 | -8.615850e-47 |
| Msa0096240 | Msa0471900 | 0.829195 | 5.897252e-55 | -8.615850e-47 |
| Msa0096240 | Msa0481530 | 0.800767 | 1.235214e-48 | -8.615850e-47 |
| Msa0096240 | Msa0484650 | 0.821936 | 3.097688e-53 | -8.615850e-47 |
| Msa0096240 | Msa0484780 | 0.823213 | 1.563623e-53 | -8.615850e-47 |
| Msa0096240 | Msa0485120 | 0.810811 | 9.573675e-51 | -8.615850e-47 |
| Msa0096240 | Msa0501450 | 0.801843 | 7.435148e-49 | -8.615850e-47 |
| Msa0096240 | Msa0516170 | 0.805797 | 1.122375e-49 | -8.615850e-47 |
| Msa0096240 | Msa0517640 | 0.813915 | 2.009779e-51 | -8.615850e-47 |
| Msa0096240 | Msa0557070 | 0.800767 | 1.235214e-48 | -8.615850e-47 |
| Msa0096240 | Msa0557320 | 0.818568 | 1.831742e-52 | -8.615850e-47 |
| Msa0096240 | Msa0561230 | 0.818344 | 2.059009e-52 | -8.615850e-47 |
| Msa0096240 | Msa0577500 | 0.818665 | 1.741478e-52 | -8.615850e-47 |
| Msa0096240 | Msa0585560 | 0.801329 | 9.476698e-49 | -8.615850e-47 |
| Msa0096240 | Msa0612960 | 0.807474 | 4.965477e-50 | -8.615850e-47 |
| Msa0096240 | Msa0615310 | 0.837007 | 6.701722e-57 | -8.615850e-47 |
| Msa0096240 | Msa0618970 | 0.804369 | 2.233332e-49 | -8.615850e-47 |
| Msa0096240 | Msa0621600 | 0.829087 | 6.263531e-55 | -8.615850e-47 |
| Msa0096240 | Msa0624060 | 0.806944 | 6.431018e-50 | -8.615850e-47 |
| Msa0096240 | Msa0654720 | 0.813464 | 2.525551e-51 | -8.615850e-47 |
| Msa0096240 | Msa0659400 | 0.806606 | 7.581006e-50 | -8.615850e-47 |
| Msa0096240 | Msa0667050 | 0.822612 | 2.158242e-53 | -8.615850e-47 |
| Msa0096240 | Msa0676130 | 0.805521 | 1.282445e-49 | -8.615850e-47 |
| Msa0096240 | Msa0676180 | 0.807830 | 4.173791e-50 | -8.615850e-47 |
| Msa0096240 | Msa0688070 | 0.826705 | 2.342562e-54 | -8.615850e-47 |
| Msa0096240 | Msa0698360 | 0.840576 | 8.001808e-58 | -8.615850e-47 |
| Msa0096240 | Msa0703050 | 0.805535 | 1.273893e-49 | -8.615850e-47 |
| Msa0096240 | Msa0709160 | 0.807704 | 4.438713e-50 | -8.615850e-47 |
| Msa0096240 | Msa0711100 | 0.815107 | 1.095198e-51 | -8.615850e-47 |
| Msa0096240 | Msa0729510 | 0.814101 | 1.828293e-51 | -8.615850e-47 |
| Msa0096240 | Msa0732600 | 0.806938 | 6.451564e-50 | -8.615850e-47 |
| Msa0096240 | Msa0740510 | 0.804636 | 1.964009e-49 | -8.615850e-47 |
| Msa0096240 | Msa0763890 | 0.804352 | 2.250944e-49 | -8.615850e-47 |
| Msa0096240 | Msa0773590 | 0.828797 | 7.361454e-55 | -8.615850e-47 |
| Msa0096240 | Msa0797770 | 0.808492 | 3.015874e-50 | -8.615850e-47 |
| Msa0096240 | Msa0811040 | 0.816219 | 6.190139e-52 | -8.615850e-47 |
| Msa0096240 | Msa0831850 | 0.812933 | 3.303808e-51 | -8.615850e-47 |
| Msa0096240 | Msa0832090 | 0.804482 | 2.114686e-49 | -8.615850e-47 |
| Msa0096240 | Msa0832150 | 0.827073 | 1.913077e-54 | -8.615850e-47 |
| Msa0096240 | Msa0835230 | 0.804701 | 1.903744e-49 | -8.615850e-47 |
| Msa0096240 | Msa0866410 | 0.800887 | 1.167423e-48 | -8.615850e-47 |
| Msa0096240 | Msa0896750 | 0.808169 | 3.534651e-50 | -8.615850e-47 |
| Msa0096240 | Msa0900620 | 0.814407 | 1.565515e-51 | -8.615850e-47 |
| Msa0096240 | Msa0930860 | 0.801843 | 7.435148e-49 | -8.615850e-47 |
| Msa0096240 | Msa0933100 | 0.802249 | 6.136588e-49 | -8.615850e-47 |
| Msa0096240 | Msa0933230 | 0.811381 | 7.202309e-51 | -8.615850e-47 |
| Msa0096240 | Msa0933310 | 0.814856 | 1.244831e-51 | -8.615850e-47 |
| Msa0096240 | Msa0964310 | 0.804275 | 2.336068e-49 | -8.615850e-47 |
| Msa0096240 | Msa0969520 | 0.819491 | 1.129808e-52 | -8.615850e-47 |
| Msa0096240 | Msa0971090 | 0.811131 | 8.162957e-51 | -8.615850e-47 |
| Msa0096240 | Msa0981310 | 0.803578 | 3.261183e-49 | -8.615850e-47 |
| Msa0096240 | Msa0999100 | 0.847370 | 1.207528e-59 | -8.615850e-47 |
| Msa0096240 | Msa1001390 | 0.801283 | 9.684845e-49 | -8.615850e-47 |
| Msa0096240 | Msa1023920 | 0.819514 | 1.116166e-52 | -8.615850e-47 |
| Msa0096240 | Msa1023950 | 0.804073 | 2.573341e-49 | -8.615850e-47 |
| Msa0096240 | Msa1041670 | 0.810511 | 1.111569e-50 | -8.615850e-47 |
| Msa0096240 | Msa1043510 | 0.815645 | 8.313797e-52 | -8.615850e-47 |
| Msa0096240 | Msa1058750 | 0.802613 | 5.163167e-49 | -8.615850e-47 |
| Msa0096240 | Msa1062920 | 0.800664 | 1.295857e-48 | -8.615850e-47 |
| Msa0096240 | Msa1077070 | 0.801826 | 7.497394e-49 | -8.615850e-47 |
| Msa0096240 | Msa1081330 | 0.832748 | 7.918654e-56 | -8.615850e-47 |
| Msa0096240 | Msa1082500 | 0.807270 | 5.485704e-50 | -8.615850e-47 |
| Msa0096240 | Msa1107900 | 0.822121 | 2.806470e-53 | -8.615850e-47 |
| Msa0096240 | Msa1109680 | 0.807406 | 5.135008e-50 | -8.615850e-47 |
| Msa0096240 | Msa1114410 | 0.818360 | 2.041565e-52 | -8.615850e-47 |
| Msa0096240 | Msa1130530 | 0.811647 | 6.305626e-51 | -8.615850e-47 |
| Msa0096240 | Msa1166560 | 0.808884 | 2.487240e-50 | -8.615850e-47 |
| Msa0096240 | Msa1172670 | 0.802041 | 6.772790e-49 | -8.615850e-47 |
| Msa0096240 | Msa1178110 | 0.806328 | 8.676243e-50 | -8.615850e-47 |
| Msa0096240 | Msa1199570 | 0.803591 | 3.239676e-49 | -8.615850e-47 |
| Msa0096240 | Msa1204530 | 0.812179 | 4.830206e-51 | -8.615850e-47 |
| Msa0096240 | Msa1204630 | 0.818027 | 2.427704e-52 | -8.615850e-47 |
| Msa0096240 | Msa1224480 | 0.825316 | 5.009729e-54 | -8.615850e-47 |
| Msa0096240 | Msa1237980 | 0.803651 | 3.148969e-49 | -8.615850e-47 |
| Msa0096240 | Msa1262210 | 0.802332 | 5.900110e-49 | -8.615850e-47 |
| Msa0096240 | Msa1270730 | 0.800500 | 1.399704e-48 | -8.615850e-47 |
| Msa0096240 | Msa1292400 | 0.807606 | 4.656192e-50 | -8.615850e-47 |
| Msa0096240 | Msa1295930 | 0.806152 | 9.450257e-50 | -8.615850e-47 |
| Msa0096240 | Msa1296760 | 0.803109 | 4.077730e-49 | -8.615850e-47 |
| Msa0096240 | Msa1297290 | 0.834458 | 2.961983e-56 | -8.615850e-47 |
| Msa0096240 | Msa1305660 | 0.813005 | 3.186246e-51 | -8.615850e-47 |
| Msa0096240 | Msa1306840 | 0.820065 | 8.349152e-53 | -8.615850e-47 |
| Msa0096240 | Msa1320820 | 0.800173 | 1.631578e-48 | -8.615850e-47 |
| Msa0096240 | Msa1328710 | 0.800219 | 1.597291e-48 | -8.615850e-47 |
| Msa0096240 | Msa1329700 | 0.808729 | 2.683971e-50 | -8.615850e-47 |
| Msa0096240 | Msa1331000 | 0.812361 | 4.406608e-51 | -8.615850e-47 |
| Msa0096240 | Msa1333730 | 0.816860 | 4.447864e-52 | -8.615850e-47 |
| Msa0096240 | Msa1353470 | 0.806538 | 7.834453e-50 | -8.615850e-47 |
| Msa0096240 | Msa1359040 | 0.823828 | 1.122381e-53 | -8.615850e-47 |
| Msa0096240 | Msa1359560 | 0.800853 | 1.185773e-48 | -8.615850e-47 |
| Msa0096240 | Msa1372240 | 0.802143 | 6.451819e-49 | -8.615850e-47 |
| Msa0096240 | Msa1372760 | 0.810545 | 1.092925e-50 | -8.615850e-47 |
| Msa0096240 | Msa1377820 | 0.805223 | 1.480877e-49 | -8.615850e-47 |
| Msa0096240 | Msa1378410 | 0.801215 | 1.000267e-48 | -8.615850e-47 |
| Msa0096240 | Msa1385000 | 0.833613 | 4.821787e-56 | -8.615850e-47 |
| Msa0096240 | Msa1397120 | 0.834087 | 3.671363e-56 | -8.615850e-47 |
| Msa0096240 | Msa1402400 | 0.820463 | 6.768024e-53 | -8.615850e-47 |
| Msa0096240 | Msa1403890 | 0.832055 | 1.175977e-55 | -8.615850e-47 |
| Msa0096240 | Msa1404300 | 0.804138 | 2.494271e-49 | -8.615850e-47 |
| Msa0096240 | Msa1407580 | 0.809852 | 1.541464e-50 | -8.615850e-47 |
| Msa0096240 | Msa1407600 | 0.809217 | 2.110770e-50 | -8.615850e-47 |
| Msa0096240 | Msa1424450 | 0.802594 | 5.210022e-49 | -8.615850e-47 |
| Msa0096240 | Msa1426570 | 0.807414 | 5.114280e-50 | -8.615850e-47 |
| Msa0096240 | Msa1427230 | 0.810294 | 1.238132e-50 | -8.615850e-47 |
| Msa0096240 | Msa1433390 | 0.820616 | 6.244187e-53 | -8.615850e-47 |
| Msa0096240 | Msa1435270 | 0.810119 | 1.350334e-50 | -8.615850e-47 |
| Msa0096240 | Msa1437330 | 0.825091 | 5.663861e-54 | -8.615850e-47 |
| Msa0096240 | Msa1443850 | 0.805323 | 1.410882e-49 | -8.615850e-47 |
| Msa0096240 | Msa1460830 | 0.801484 | 8.811250e-49 | -8.615850e-47 |
| Msa0096240 | Msa1466540 | 0.815614 | 8.445860e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096240 | MtrunA17_Chr2g0306401 | 78.732 | 489 | 31 | 6 | 1 | 476 | 3 | 431 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096240 | AT5G19950.2 | 36.897 | 477 | 211 | 14 | 2 | 455 | 8 | 417 | 2.14e-74 | 241 |
| Msa0096240 | AT5G19950.1 | 36.897 | 477 | 211 | 14 | 2 | 455 | 8 | 417 | 2.14e-74 | 241 |
| Msa0096240 | AT5G19950.3 | 36.688 | 477 | 210 | 14 | 2 | 455 | 8 | 415 | 1.84e-73 | 239 |
Find 144 sgRNAs with CRISPR-Local
Find 1023 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACCAACCCTTCCTTCTT+AGG | 0.124620 | 1_3:+1935396 | None:intergenic |
| AAGAAGGAAGGGTTGGTATT+TGG | 0.198065 | 1_3:-1935393 | Msa0096240:CDS |
| AAATATCTTCTTTCCGATTT+CGG | 0.244488 | 1_3:+1924720 | None:intergenic |
| AAATATCTTCTTTCCGATTT+CGG | 0.246661 | 1_3:+1928076 | None:intergenic |
| AAATCGGAAAGAAGATATTT+TGG | 0.248020 | 1_3:-1924717 | Msa0096240:CDS |
| AAATCGGAAAGAAGATATTT+TGG | 0.248020 | 1_3:-1928073 | Msa0096240:CDS |
| CCTAAAGCATTGACTGTATT+AGG | 0.268079 | 1_3:-1934023 | Msa0096240:CDS |
| CCTAATACAGTCAATGCTTT+AGG | 0.274594 | 1_3:+1934023 | None:intergenic |
| AGAGGAAGAGGGAGGGGAAG+GGG | 0.277896 | 1_3:-1923081 | Msa0096240:intron |
| GCAAAGGAATCACCTTCTTT+TGG | 0.304615 | 1_3:+1924386 | None:intergenic |
| GCAAAGGAATCACCTTCTTT+TGG | 0.304615 | 1_3:+1927744 | None:intergenic |
| AAGCTAGAGGATCGTGATTC+AGG | 0.319089 | 1_3:-1933924 | Msa0096240:CDS |
| AGGGGTAGAGGAAGAGGGAG+GGG | 0.336283 | 1_3:-1923087 | Msa0096240:CDS |
| GAAGGGGTAGAGGAAGAGGG+AGG | 0.339415 | 1_3:-1923089 | Msa0096240:CDS |
| GAAGACAAGCCTAGTAGTTC+GGG | 0.351843 | 1_3:-1924416 | Msa0096240:CDS |
| GAAGACAAGCCTAGTAGTTC+GGG | 0.351843 | 1_3:-1927774 | Msa0096240:CDS |
| AGAGGAAGGGGTAGAGGAAG+AGG | 0.352804 | 1_3:-1923093 | Msa0096240:CDS |
| TTACCTGACAATGTTGTTCC+TGG | 0.353424 | 1_3:-1934846 | Msa0096240:CDS |
| AGAGGTAGAGGAAGGGGTAG+AGG | 0.358047 | 1_3:-1923099 | Msa0096240:CDS |
| AGAAGTGGTAAGCCCATTGC+TGG | 0.359749 | 1_3:-1924785 | Msa0096240:CDS |
| CTTTCCGATTTCGGTCTTGC+TGG | 0.360863 | 1_3:+1924729 | None:intergenic |
| AGAACCTCGTCATTATTAGA+AGG | 0.372706 | 1_3:+1923405 | None:intergenic |
| CAATGTTGTTCCTGGTACTA+AGG | 0.388113 | 1_3:-1934838 | Msa0096240:intron |
| GTAGAGGAAGAGGGAGGGGA+AGG | 0.393464 | 1_3:-1923083 | Msa0096240:CDS |
| ATCTGATGATAGCTATCAAA+TGG | 0.397695 | 1_3:-1923133 | Msa0096240:CDS |
| GGATGTCGACCATGCTGATA+TGG | 0.407274 | 1_3:+1923519 | None:intergenic |
| CTTTCCGATTTCGGTCCTGC+TGG | 0.415890 | 1_3:+1928085 | None:intergenic |
| AGAAGTGGTAAGCCCATTGC+TGG | 0.416032 | 1_3:-1928141 | Msa0096240:CDS |
| GGAAGAGGAGGAAGAGGTAG+AGG | 0.423317 | 1_3:-1923111 | Msa0096240:CDS |
| TGAAGACAAGCCTAGTAGTT+CGG | 0.424672 | 1_3:-1924417 | Msa0096240:CDS |
| TGAAGACAAGCCTAGTAGTT+CGG | 0.424672 | 1_3:-1927775 | Msa0096240:CDS |
| ATATCCAGCAAGACCGAAAT+CGG | 0.426444 | 1_3:-1924733 | Msa0096240:CDS |
| ATTTAACCTCGAACATTCTC+AGG | 0.427187 | 1_3:-1923337 | Msa0096240:intron |
| ATATCCAGCAGGACCGAAAT+CGG | 0.428799 | 1_3:-1928089 | Msa0096240:CDS |
| GGAGGAAGAGGTAGAGGAAG+GGG | 0.439587 | 1_3:-1923105 | Msa0096240:CDS |
| GGCCTTGTCCCCGAACTACT+AGG | 0.439945 | 1_3:+1924407 | None:intergenic |
| GGCCTTGTCCCCGAACTACT+AGG | 0.439945 | 1_3:+1927765 | None:intergenic |
| ATACCAACCCTTCCTTCTTA+GGG | 0.441652 | 1_3:+1935397 | None:intergenic |
| TCTAAAATCCATCCCGCCTC+CGG | 0.443014 | 1_3:-1924687 | Msa0096240:CDS |
| TAGAGGAAGAGGGAGGGGAA+GGG | 0.443971 | 1_3:-1923082 | Msa0096240:CDS |
| TCCTCCATTTGTGAAGCTGC+AGG | 0.445152 | 1_3:-1933895 | Msa0096240:CDS |
| AAGGGGTAGAGGAAGAGGGA+GGG | 0.445197 | 1_3:-1923088 | Msa0096240:CDS |
| GGTGTTTGAGTCCGTCGAAT+CGG | 0.449333 | 1_3:-1935306 | Msa0096240:CDS |
| TTGCATTGGACAGATTCGTT+TGG | 0.451626 | 1_3:-1934087 | Msa0096240:intron |
| TTTCAGCTCGTTCCGGAGGC+GGG | 0.453649 | 1_3:+1924675 | None:intergenic |
| CCAACCTGCAGCTTCACAAA+TGG | 0.454450 | 1_3:+1933891 | None:intergenic |
| CGGTCTTGCTGGATATCAGT+TGG | 0.455318 | 1_3:+1924740 | None:intergenic |
| ACTTGGCTCCGATGGATTTG+AGG | 0.457266 | 1_3:+1935267 | None:intergenic |
| AGCTCGTTCCGGAGGCGGGA+TGG | 0.460853 | 1_3:+1924679 | None:intergenic |
| TCCTAGGGGTCGAGGACGTA+GGG | 0.462415 | 1_3:-1923499 | Msa0096240:CDS |
| CAAGCTATACCACTATGAAC+TGG | 0.462609 | 1_3:+1934053 | None:intergenic |
| GTGTCATGATTAGGTACAAA+GGG | 0.462743 | 1_3:-1923214 | Msa0096240:intron |
| GGTACGAAGAAGAGATGGTT+CGG | 0.463509 | 1_3:+1935238 | None:intergenic |
| GAGGAGGAAGAGGTAGAGGA+AGG | 0.464321 | 1_3:-1923107 | Msa0096240:CDS |
| AGATGGTTCGGGTAAGGACT+TGG | 0.464571 | 1_3:+1935250 | None:intergenic |
| AGCTCGTTCTGGAAGTGGGA+TGG | 0.475111 | 1_3:+1928035 | None:intergenic |
| GAGCATGTTCACATATGAAA+AGG | 0.477694 | 1_3:-1923157 | Msa0096240:CDS |
| TTCAATCACTATATGAAGAA+TGG | 0.483666 | 1_3:-1933992 | Msa0096240:CDS |
| GAGGAAGGGGTAGAGGAAGA+GGG | 0.484968 | 1_3:-1923092 | Msa0096240:CDS |
| GCTCTAATAGCTCCAGCAAT+GGG | 0.486502 | 1_3:+1924773 | None:intergenic |
| GCTCTAATAGCTCCAGCAAT+GGG | 0.486502 | 1_3:+1928129 | None:intergenic |
| ATCAGCATGGTCGACATCCT+AGG | 0.487964 | 1_3:-1923515 | Msa0096240:CDS |
| GGTCGAGGACGTAGGGGAAA+GGG | 0.488449 | 1_3:-1923492 | Msa0096240:CDS |
| CGGTCCTGCTGGATATCAGT+TGG | 0.491779 | 1_3:+1928096 | None:intergenic |
| GGGTAAGGACTTGGCTCCGA+TGG | 0.492698 | 1_3:+1935259 | None:intergenic |
| AGGAGGAAGAGGTAGAGGAA+GGG | 0.496411 | 1_3:-1923106 | Msa0096240:CDS |
| GGGTCGAGGACGTAGGGGAA+AGG | 0.496809 | 1_3:-1923493 | Msa0096240:CDS |
| GGAAGAAACCGATGATCTAA+AGG | 0.497727 | 1_3:-1935372 | Msa0096240:CDS |
| GTACCAGGAACAACATTGTC+AGG | 0.509712 | 1_3:+1934843 | None:intergenic |
| ACGGACTCAAACACCTTGGA+AGG | 0.509961 | 1_3:+1935314 | None:intergenic |
| GGATGAAGTTGTATTTACTC+TGG | 0.510650 | 1_3:-1923460 | Msa0096240:CDS |
| CAAATGGGAAGAGGAGGAAG+AGG | 0.510724 | 1_3:-1923117 | Msa0096240:CDS |
| CGTACCACTTCTTATCTCCA+TGG | 0.513656 | 1_3:-1935221 | Msa0096240:CDS |
| TCAGCATGGTCGACATCCTA+GGG | 0.514255 | 1_3:-1923514 | Msa0096240:CDS |
| ATTAGGTACAAAGGGGTCCT+CGG | 0.514674 | 1_3:-1923206 | Msa0096240:intron |
| AAGAAGAGATGGTTCGGGTA+AGG | 0.516042 | 1_3:+1935244 | None:intergenic |
| TTTCAGCTCGTTCTGGAAGT+GGG | 0.525603 | 1_3:+1928031 | None:intergenic |
| CCTGAAGAACTTTGGGACCA+TGG | 0.526657 | 1_3:+1935204 | None:intergenic |
| GCAGATTATAACTTTAGAAG+TGG | 0.526692 | 1_3:-1924800 | Msa0096240:CDS |
| GATTATTGCCTTTAGATCAT+CGG | 0.528530 | 1_3:+1935364 | None:intergenic |
| CCATTTGTGAAGCTGCAGGT+TGG | 0.529359 | 1_3:-1933891 | Msa0096240:CDS |
| TACAGACCTGAGAATGTTCG+AGG | 0.530217 | 1_3:+1923331 | None:intergenic |
| TTAGGTACAAAGGGGTCCTC+GGG | 0.530475 | 1_3:-1923205 | Msa0096240:intron |
| AGCCTAGTAGTTCGGGGACA+AGG | 0.537297 | 1_3:-1924409 | Msa0096240:CDS |
| AGCCTAGTAGTTCGGGGACA+AGG | 0.537297 | 1_3:-1927767 | Msa0096240:CDS |
| AATAGAAACCCTAAGAAGGA+AGG | 0.539886 | 1_3:-1935405 | Msa0096240:CDS |
| TCTGATGATAGCTATCAAAT+GGG | 0.542787 | 1_3:-1923132 | Msa0096240:CDS |
| AAACACCTTGGAAGGGTCAT+CGG | 0.548018 | 1_3:+1935322 | None:intergenic |
| GCAGGAGAGTTCGAGAGACT+CGG | 0.548996 | 1_3:-1935441 | None:intergenic |
| GTGTCTCACGGATGGTCACT+CGG | 0.550809 | 1_3:-1934904 | Msa0096240:CDS |
| CCCCTACGTCCTCGACCCCT+AGG | 0.553539 | 1_3:+1923498 | None:intergenic |
| GTACGAAGAAGAGATGGTTC+GGG | 0.554621 | 1_3:+1935239 | None:intergenic |
| AAACCCTAAGAAGGAAGGGT+TGG | 0.555276 | 1_3:-1935400 | Msa0096240:CDS |
| GGTCGACATCCTAGGGGTCG+AGG | 0.557198 | 1_3:-1923507 | Msa0096240:CDS |
| AGCTATCAAATGGGAAGAGG+AGG | 0.557811 | 1_3:-1923123 | Msa0096240:CDS |
| GATAGCTATCAAATGGGAAG+AGG | 0.563674 | 1_3:-1923126 | Msa0096240:CDS |
| GGCTCCGATGGATTTGAGGT+CGG | 0.568061 | 1_3:+1935271 | None:intergenic |
| GCAGATTATAACTCTAGAAG+TGG | 0.571193 | 1_3:-1928156 | Msa0096240:CDS |
| AGCTCTAATAGCTCCAGCAA+TGG | 0.572577 | 1_3:+1924772 | None:intergenic |
| AGCTCTAATAGCTCCAGCAA+TGG | 0.572577 | 1_3:+1928128 | None:intergenic |
| TCAACAGATATCTTCAGTGA+GGG | 0.573744 | 1_3:-1934991 | Msa0096240:intron |
| CAGCAATAGAAACCCTAAGA+AGG | 0.576577 | 1_3:-1935409 | Msa0096240:CDS |
| ATTGAGAAGTTCCGATTCGA+CGG | 0.581451 | 1_3:+1935295 | None:intergenic |
| GCCGTGATGAGGATCTTGCT+TGG | 0.584059 | 1_3:-1923374 | Msa0096240:CDS |
| AATAAAGTTCCAGTTCATAG+TGG | 0.588272 | 1_3:-1934062 | Msa0096240:CDS |
| GGAAGGGTCATCGGCTAGTG+CGG | 0.594824 | 1_3:+1935331 | None:intergenic |
| GAGGCCAACTGATATCCAGC+AGG | 0.597345 | 1_3:-1928100 | Msa0096240:CDS |
| ACCTGCAGCTTCACAAATGG+AGG | 0.601511 | 1_3:+1933894 | None:intergenic |
| ATAGAAACCCTAAGAAGGAA+GGG | 0.603999 | 1_3:-1935404 | Msa0096240:CDS |
| CTGCAGGTTGGATCTACCAC+AGG | 0.605693 | 1_3:-1933879 | Msa0096240:intron |
| TTCTCTGCTTCAGATTCCCG+AGG | 0.606202 | 1_3:+1923189 | None:intergenic |
| TCGGGGACAAGGCCAAAAGA+AGG | 0.606724 | 1_3:-1924398 | Msa0096240:intron |
| TCGGGGACAAGGCCAAAAGA+AGG | 0.606724 | 1_3:-1927756 | Msa0096240:intron |
| ATCCTAGGGGTCGAGGACGT+AGG | 0.608387 | 1_3:-1923500 | Msa0096240:CDS |
| GAAGTGGTACGAAGAAGAGA+TGG | 0.609296 | 1_3:+1935233 | None:intergenic |
| TGCAGCTTCACAAATGGAGG+AGG | 0.610308 | 1_3:+1933897 | None:intergenic |
| TGACACATTACCTTAGTACC+AGG | 0.616884 | 1_3:+1934828 | None:intergenic |
| TTCGACGGACTCAAACACCT+TGG | 0.620106 | 1_3:+1935310 | None:intergenic |
| TAGGGGAAAGGGTCAAGAAG+AGG | 0.620261 | 1_3:-1923481 | Msa0096240:CDS |
| AATTCCGACCTCAAATCCAT+CGG | 0.622960 | 1_3:-1935275 | Msa0096240:CDS |
| TCTAGATATTAGCCGTGATG+AGG | 0.626500 | 1_3:-1923385 | Msa0096240:CDS |
| CCTAGGGGTCGAGGACGTAG+GGG | 0.627085 | 1_3:-1923498 | Msa0096240:CDS |
| CTAAGACTGTGTCTCACGGA+TGG | 0.628902 | 1_3:-1934912 | Msa0096240:CDS |
| TGGAATATGAGTGTATTCAA+CGG | 0.629200 | 1_3:+1934872 | None:intergenic |
| ACTAGCCGATGACCCTTCCA+AGG | 0.633849 | 1_3:-1935327 | Msa0096240:CDS |
| TGTGTCATGATTAGGTACAA+AGG | 0.634450 | 1_3:-1923215 | Msa0096240:intron |
| ACTTCTAAGACTGTGTCTCA+CGG | 0.635352 | 1_3:-1934916 | Msa0096240:CDS |
| AAAGCATTGACTGTATTAGG+AGG | 0.643444 | 1_3:-1934020 | Msa0096240:CDS |
| GTCATCTATAAGGAAGCTAG+AGG | 0.646105 | 1_3:-1933937 | Msa0096240:CDS |
| GGGACCATGGAGATAAGAAG+TGG | 0.655191 | 1_3:+1935217 | None:intergenic |
| TTGAATCAACCATATCAGCA+TGG | 0.658756 | 1_3:-1923528 | Msa0096240:CDS |
| TTCAACAGATATCTTCAGTG+AGG | 0.660001 | 1_3:-1934992 | Msa0096240:intron |
| GAGCTATTAGAGCTGAGATG+AGG | 0.662902 | 1_3:-1924763 | Msa0096240:CDS |
| GAGCTATTAGAGCTGAGATG+AGG | 0.662902 | 1_3:-1928119 | Msa0096240:CDS |
| CGGACTCAAACACCTTGGAA+GGG | 0.675028 | 1_3:+1935315 | None:intergenic |
| AATATGTCAAGAAATTCAAG+TGG | 0.677205 | 1_3:-1934945 | Msa0096240:CDS |
| GCCAAGCAAGATCCTCATCA+CGG | 0.684569 | 1_3:+1923373 | None:intergenic |
| CTAGAGGATCGTGATTCAGG+TGG | 0.690835 | 1_3:-1933921 | Msa0096240:CDS |
| GGACATATCTATGAGCAGTG+TGG | 0.706847 | 1_3:-1934970 | Msa0096240:CDS |
| AAGACAAGCCTAGTAGTTCG+GGG | 0.714772 | 1_3:-1924415 | Msa0096240:CDS |
| AAGACAAGCCTAGTAGTTCG+GGG | 0.714772 | 1_3:-1927773 | Msa0096240:CDS |
| CAGCATGGTCGACATCCTAG+GGG | 0.720955 | 1_3:-1923513 | Msa0096240:CDS |
| TGTCATGATTAGGTACAAAG+GGG | 0.728662 | 1_3:-1923213 | Msa0096240:intron |
| AAAACCTTCTAATAATGACG+AGG | 0.737735 | 1_3:-1923409 | Msa0096240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAATAAGTTATAATAAA+AGG | + | chr1_3:1924988-1925007 | None:intergenic | 10.0% |
| !!! | ATAATTGATAATAATGATAA+TGG | - | chr1_3:1927522-1927541 | Msa0096240:intron | 10.0% |
| !!! | TCTACTTTTTTTTTTTTTTT+TGG | + | chr1_3:1930044-1930063 | None:intergenic | 10.0% |
| !!! | ATTATTTTTTATATATATCC+CGG | - | chr1_3:1930473-1930492 | Msa0096240:intron | 10.0% |
| !!! | AATTAATATAAGGATAATTT+TGG | + | chr1_3:1931028-1931047 | None:intergenic | 10.0% |
| !!! | TGAGATTTTAAATTAATATA+AGG | + | chr1_3:1931038-1931057 | None:intergenic | 10.0% |
| !! | TAACAACATTTATTATTATT+AGG | - | chr1_3:1931070-1931089 | Msa0096240:intron | 10.0% |
| !! | AGAAAAAATTGTTAATAATA+TGG | + | chr1_3:1931166-1931185 | None:intergenic | 10.0% |
| !! | AGAAAAAATTGTTAATAATA+TGG | + | chr1_3:1931166-1931185 | None:intergenic | 10.0% |
| !! | TCATTATTTAATTAAGTTTA+AGG | - | chr1_3:1931340-1931359 | Msa0096240:intron | 10.0% |
| !! | CATTATTTAATTAAGTTTAA+GGG | - | chr1_3:1931341-1931360 | Msa0096240:intron | 10.0% |
| !!! | TCTACTTTTATTTTATTTTT+TGG | + | chr1_3:1933045-1933064 | None:intergenic | 10.0% |
| !!! | GATTATTTTTTTCATAAAAA+AGG | + | chr1_3:1933260-1933279 | None:intergenic | 10.0% |
| !!! | TATTTTTTATATATATATCC+CGG | - | chr1_3:1933831-1933850 | Msa0096240:intron | 10.0% |
| !! | TTATCATAAATTATATTTGA+AGG | - | chr1_3:1934738-1934757 | Msa0096240:intron | 10.0% |
| !! | ATCAAATAATGCTTATTATT+AGG | - | chr1_3:1924678-1924697 | Msa0096240:CDS | 15.0% |
| !! | TATATAGACTATTTATTGTT+AGG | - | chr1_3:1925615-1925634 | Msa0096240:intron | 15.0% |
| !!! | TTCTCTTTATTTATATGTAA+AGG | - | chr1_3:1926670-1926689 | Msa0096240:intron | 15.0% |
| !! | AATAGTAATTAAGGAAAATA+GGG | + | chr1_3:1926839-1926858 | None:intergenic | 15.0% |
| !! | AAATAGTAATTAAGGAAAAT+AGG | + | chr1_3:1926840-1926859 | None:intergenic | 15.0% |
| !! | TAAACAAAATGATTTATGTT+TGG | - | chr1_3:1927757-1927776 | Msa0096240:CDS | 15.0% |
| !! | AAAATGAGATAAAAAATTTG+TGG | - | chr1_3:1928781-1928800 | Msa0096240:intron | 15.0% |
| !! | AATTAATTGATGAATTGTTT+GGG | - | chr1_3:1928965-1928984 | Msa0096240:intron | 15.0% |
| !!! | TTTCTAAAATAGATTTATGT+TGG | - | chr1_3:1929000-1929019 | Msa0096240:intron | 15.0% |
| !!! | TTCTAAAATAGATTTATGTT+GGG | - | chr1_3:1929001-1929020 | Msa0096240:intron | 15.0% |
| !!! | AATTTTTTTGTATCAAACTT+AGG | + | chr1_3:1929520-1929539 | None:intergenic | 15.0% |
| !!! | TATTTTCTCCATTATTATTT+CGG | + | chr1_3:1929816-1929835 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTGGAAACT+CGG | + | chr1_3:1930036-1930055 | None:intergenic | 15.0% |
| !! | TAATAATAAATGTTGTTACA+AGG | + | chr1_3:1931068-1931087 | None:intergenic | 15.0% |
| !!! | AAACAACTTTTACTATTATT+AGG | - | chr1_3:1931106-1931125 | Msa0096240:intron | 15.0% |
| !!! | TTTTACTATTATTAGGTTAT+AGG | - | chr1_3:1931113-1931132 | Msa0096240:intron | 15.0% |
| !! | AAAATGAGATAAAAAATTTG+TGG | - | chr1_3:1928781-1928800 | Msa0096240:intron | 15.0% |
| !! | AATTAATTGATGAATTGTTT+GGG | - | chr1_3:1928965-1928984 | Msa0096240:intron | 15.0% |
| !!! | TTTCTAAAATAGATTTATGT+TGG | - | chr1_3:1929000-1929019 | Msa0096240:intron | 15.0% |
| !!! | TTCTAAAATAGATTTATGTT+GGG | - | chr1_3:1929001-1929020 | Msa0096240:intron | 15.0% |
| !!! | AATTTTTTTGTATCAAACTT+AGG | + | chr1_3:1929520-1929539 | None:intergenic | 15.0% |
| !!! | TATTTTCTCCATTATTATTT+CGG | + | chr1_3:1929816-1929835 | None:intergenic | 15.0% |
| !!! | TATTTTATTTTTTGGAAACT+CGG | + | chr1_3:1933037-1933056 | None:intergenic | 15.0% |
| !!! | GTTGTTATTTTATAACATAA+AGG | + | chr1_3:1933229-1933248 | None:intergenic | 15.0% |
| !!! | TCAAAGAAATTTTATTTTCT+AGG | + | chr1_3:1933342-1933361 | None:intergenic | 15.0% |
| !!! | TGTTATCTAAAATAAAGTTA+AGG | - | chr1_3:1933448-1933467 | Msa0096240:intron | 15.0% |
| !!! | GTTATCTAAAATAAAGTTAA+GGG | - | chr1_3:1933449-1933468 | Msa0096240:intron | 15.0% |
| !!! | AGATCAATTTTGAAAATATA+AGG | + | chr1_3:1935425-1935444 | None:intergenic | 15.0% |
| !! | TTTGTTGAAGAGAAAATTTA+TGG | - | chr1_3:1923403-1923422 | Msa0096240:CDS | 20.0% |
| !! | TTGTTGAAGAGAAAATTTAT+GGG | - | chr1_3:1923404-1923423 | Msa0096240:CDS | 20.0% |
| !!! | ATATTCATGGTTTTAAATTG+TGG | + | chr1_3:1924048-1924067 | None:intergenic | 20.0% |
| !! | TTTGATTCATATATTTGTCT+TGG | - | chr1_3:1924103-1924122 | Msa0096240:intron | 20.0% |
| !!! | ACTAAAGTGATAATTAGTTT+AGG | - | chr1_3:1924190-1924209 | Msa0096240:intron | 20.0% |
| !!! | AAAAATATTCAGGATTTTCT+CGG | - | chr1_3:1924462-1924481 | Msa0096240:intron | 20.0% |
| !! | TAATAAGCATTATTTGATTG+TGG | + | chr1_3:1924676-1924695 | None:intergenic | 20.0% |
| !!! | AAACTAGAATGATTTGTTTT+GGG | + | chr1_3:1925691-1925710 | None:intergenic | 20.0% |
| !!! | AAAACTAGAATGATTTGTTT+TGG | + | chr1_3:1925692-1925711 | None:intergenic | 20.0% |
| !!! | ATTTTTTATAAGTGAGTCTT+GGG | - | chr1_3:1925719-1925738 | Msa0096240:intron | 20.0% |
| !!! | AATTATTTTTCAAGTGTCAT+AGG | - | chr1_3:1925789-1925808 | Msa0096240:intron | 20.0% |
| !!! | CTTTTTGTTACATAACATTT+TGG | - | chr1_3:1925933-1925952 | Msa0096240:intron | 20.0% |
| !! | TCTTATTATTTAACCCTAAT+GGG | + | chr1_3:1926623-1926642 | None:intergenic | 20.0% |
| !! | ATAATGATAATATCAGTAGA+AGG | + | chr1_3:1926803-1926822 | None:intergenic | 20.0% |
| !! | GAAGAAACAAATAGTAATTA+AGG | + | chr1_3:1926848-1926867 | None:intergenic | 20.0% |
| !! | AAACAGTAATTAAGGTAAAT+AGG | - | chr1_3:1927488-1927507 | Msa0096240:intron | 20.0% |
| !! | AACAGTAATTAAGGTAAATA+GGG | - | chr1_3:1927489-1927508 | Msa0096240:intron | 20.0% |
| !! | TAAAGAATGAGAATTGATAA+AGG | - | chr1_3:1927847-1927866 | Msa0096240:intron | 20.0% |
| !! | AAAGAATGAGAATTGATAAA+GGG | - | chr1_3:1927848-1927867 | Msa0096240:intron | 20.0% |
| !!! | TATATAGAAAGTTCATTTTC+AGG | + | chr1_3:1928130-1928149 | None:intergenic | 20.0% |
| !! | AATAATAGAATGTTCTCTTT+AGG | + | chr1_3:1928304-1928323 | None:intergenic | 20.0% |
| !! | ATTCTATTATTTAACCCTAA+CGG | - | chr1_3:1928313-1928332 | Msa0096240:intron | 20.0% |
| !!! | TATTATGTCATTTGATTAAG+AGG | - | chr1_3:1928501-1928520 | Msa0096240:intron | 20.0% |
| !!! | ATTATGTCATTTGATTAAGA+GGG | - | chr1_3:1928502-1928521 | Msa0096240:intron | 20.0% |
| !! | AATAAAATTCGACTAGAAAA+GGG | + | chr1_3:1928848-1928867 | None:intergenic | 20.0% |
| !! | TTATTGATGGAAAGAAAAAA+CGG | - | chr1_3:1928863-1928882 | Msa0096240:intron | 20.0% |
| !! | GAATTAATTGATGAATTGTT+TGG | - | chr1_3:1928964-1928983 | Msa0096240:intron | 20.0% |
| !!! | AAATTTTATGCTTTTAGGAA+AGG | - | chr1_3:1929543-1929562 | Msa0096240:intron | 20.0% |
| !!! | TTTTCTGTATAAGAAATATG+TGG | + | chr1_3:1929593-1929612 | None:intergenic | 20.0% |
| !! | ACATATTTCTTATACAGAAA+AGG | - | chr1_3:1929592-1929611 | Msa0096240:intron | 20.0% |
| !!! | ATTTTCTCCATTATTATTTC+GGG | + | chr1_3:1929815-1929834 | None:intergenic | 20.0% |
| !!! | GATTTTTAATTTGAAGTGTT+TGG | - | chr1_3:1930945-1930964 | Msa0096240:intron | 20.0% |
| !!! | ATTTTAATTAGAAGTGTGTT+TGG | + | chr1_3:1931412-1931431 | None:intergenic | 20.0% |
| !! | CAAAATAGAATTCTAATGTA+AGG | + | chr1_3:1931523-1931542 | None:intergenic | 20.0% |
| !!! | CTTACATTAGAATTCTATTT+TGG | - | chr1_3:1931521-1931540 | Msa0096240:intron | 20.0% |
| !! | AATAAAATTCGACTAGAAAA+GGG | + | chr1_3:1928848-1928867 | None:intergenic | 20.0% |
| !! | TTATTGATGGAAAGAAAAAA+CGG | - | chr1_3:1928863-1928882 | Msa0096240:intron | 20.0% |
| !! | GAATTAATTGATGAATTGTT+TGG | - | chr1_3:1928964-1928983 | Msa0096240:intron | 20.0% |
| !! | AGTTTGATACAAAAAAATTG+CGG | - | chr1_3:1929521-1929540 | Msa0096240:intron | 20.0% |
| !!! | TTTTCTCTATAAGAAATATG+TGG | + | chr1_3:1932594-1932613 | None:intergenic | 20.0% |
| !! | ACATATTTCTTATAGAGAAA+AGG | - | chr1_3:1932593-1932612 | Msa0096240:intron | 20.0% |
| !!! | ATTTTCTCCATTATTATTTC+GGG | + | chr1_3:1929815-1929834 | None:intergenic | 20.0% |
| !!! | TAGTCCTTTTACTTTATTTT+AGG | - | chr1_3:1933162-1933181 | Msa0096240:intron | 20.0% |
| !! | GTTACCTAAAATAAAGTAAA+AGG | + | chr1_3:1933169-1933188 | None:intergenic | 20.0% |
| !! | GTGACAAAAAAAAAAGATAA+AGG | - | chr1_3:1933418-1933437 | Msa0096240:intron | 20.0% |
| !! | ATGACTTTACATTTGTATAA+GGG | + | chr1_3:1934229-1934248 | None:intergenic | 20.0% |
| !! | TTATACAAATGTAAAGTCAT+GGG | - | chr1_3:1934229-1934248 | Msa0096240:intron | 20.0% |
| !!! | AGTATTGAATTAGTTAGTAA+TGG | - | chr1_3:1934349-1934368 | Msa0096240:intron | 20.0% |
| !!! | ATGTGTATTATTGATGATAA+AGG | + | chr1_3:1934514-1934533 | None:intergenic | 20.0% |
| !! | AGGAGATATTAGAAATTAAT+TGG | + | chr1_3:1934768-1934787 | None:intergenic | 20.0% |
| !! | TAACAAGAACAAATAAGTAT+CGG | + | chr1_3:1934814-1934833 | None:intergenic | 20.0% |
| !!! | ATTATTAGAAGGTTTTACTT+GGG | + | chr1_3:1935008-1935027 | None:intergenic | 20.0% |
| !!! | TCTGTAGTTTAATTTCTTTT+AGG | - | chr1_3:1935107-1935126 | Msa0096240:intron | 20.0% |
| !!! | CTGTAGTTTAATTTCTTTTA+GGG | - | chr1_3:1935108-1935127 | Msa0096240:intron | 20.0% |
| ! | TAGTAGAAAGAGAAGAAAAA+GGG | + | chr1_3:1923262-1923281 | None:intergenic | 25.0% |
| ! | TTAGTAGAAAGAGAAGAAAA+AGG | + | chr1_3:1923263-1923282 | None:intergenic | 25.0% |
| ! | AATATGTCAAGAAATTCAAG+TGG | - | chr1_3:1923476-1923495 | Msa0096240:CDS | 25.0% |
| !!! | CATACCATTTTTGAAATTGT+GGG | - | chr1_3:1923790-1923809 | Msa0096240:intron | 25.0% |
| !!! | ATACCATTTTTGAAATTGTG+GGG | - | chr1_3:1923791-1923810 | Msa0096240:intron | 25.0% |
| !!! | CACATTTTGCTGTAATATAA+AGG | - | chr1_3:1923999-1924018 | Msa0096240:intron | 25.0% |
| ! | CACAATACTATCATCATAAA+TGG | + | chr1_3:1924311-1924330 | None:intergenic | 25.0% |
| ! | TTCAATCACTATATGAAGAA+TGG | - | chr1_3:1924429-1924448 | Msa0096240:intron | 25.0% |
| !! | GAGAAAATCCTGAATATTTT+TGG | + | chr1_3:1924463-1924482 | None:intergenic | 25.0% |
| !! | ATATTTTTCTTTTTGACCTG+TGG | + | chr1_3:1924561-1924580 | None:intergenic | 25.0% |
| ! | ATTCTGTGTGTGAATTTAAA+AGG | + | chr1_3:1924870-1924889 | None:intergenic | 25.0% |
| ! | TACTAACTCTATTCAATAAC+TGG | + | chr1_3:1925107-1925126 | None:intergenic | 25.0% |
| ! | GCGGAACAAAAAAAAAAAAA+AGG | - | chr1_3:1925136-1925155 | Msa0096240:intron | 25.0% |
| !!! | ACTCACTCTTCATTTAATTT+TGG | + | chr1_3:1925174-1925193 | None:intergenic | 25.0% |
| !!! | AGTTCAATTTTGAGTTGAAA+CGG | - | chr1_3:1925285-1925304 | Msa0096240:intron | 25.0% |
| ! | ACTTTCCTATAAGACTATAA+AGG | - | chr1_3:1925583-1925602 | Msa0096240:intron | 25.0% |
| ! | TTATTGTTAGGACTAAATGA+TGG | - | chr1_3:1925627-1925646 | Msa0096240:intron | 25.0% |
| ! | TACATTGAGCTTCAATATTT+GGG | - | chr1_3:1925657-1925676 | Msa0096240:intron | 25.0% |
| !!! | GATTTTTTATAAGTGAGTCT+TGG | - | chr1_3:1925718-1925737 | Msa0096240:intron | 25.0% |
| ! | GACACTTGAAAAATAATTGA+TGG | + | chr1_3:1925787-1925806 | None:intergenic | 25.0% |
| ! | TCCAAAAAGAGTAGAATAAT+GGG | - | chr1_3:1925986-1926005 | Msa0096240:intron | 25.0% |
| ! | GAAATTGAAGATCATTTGTT+TGG | - | chr1_3:1926042-1926061 | Msa0096240:intron | 25.0% |
| ! | TATTTCTTCTTACCTAATGA+AGG | - | chr1_3:1926281-1926300 | Msa0096240:intron | 25.0% |
| !! | AGTATTTTCTTTCATCTTGT+CGG | + | chr1_3:1926338-1926357 | None:intergenic | 25.0% |
| ! | ATGAAAGAAAATACTTTGTG+TGG | - | chr1_3:1926343-1926362 | Msa0096240:intron | 25.0% |
| !!! | TTTTAATTTTGTGCATCTGT+GGG | + | chr1_3:1926386-1926405 | None:intergenic | 25.0% |
| !! | CTCTAAAAATACTACACATA+CGG | + | chr1_3:1926409-1926428 | None:intergenic | 25.0% |
| !!! | TATGTGTAGTATTTTTAGAG+AGG | - | chr1_3:1926409-1926428 | Msa0096240:intron | 25.0% |
| !!! | ATGTGTAGTATTTTTAGAGA+GGG | - | chr1_3:1926410-1926429 | Msa0096240:intron | 25.0% |
| ! | GAGTACTTTAAGTAATTAGT+AGG | - | chr1_3:1926561-1926580 | Msa0096240:intron | 25.0% |
| ! | TACTTTAAGTAATTAGTAGG+TGG | - | chr1_3:1926564-1926583 | Msa0096240:intron | 25.0% |
| ! | TAATTAGTAGGTGGTTAATT+AGG | - | chr1_3:1926573-1926592 | Msa0096240:intron | 25.0% |
| ! | TTAATTAGATCATTAGCAAG+TGG | - | chr1_3:1926597-1926616 | Msa0096240:intron | 25.0% |
| ! | CTCTTATTATTTAACCCTAA+TGG | + | chr1_3:1926624-1926643 | None:intergenic | 25.0% |
| ! | CATTAGGGTTAAATAATAAG+AGG | - | chr1_3:1926622-1926641 | Msa0096240:intron | 25.0% |
| ! | TTCTATTGTTTAACCCTAAT+GGG | + | chr1_3:1926648-1926667 | None:intergenic | 25.0% |
| ! | ATTCTATTGTTTAACCCTAA+TGG | + | chr1_3:1926649-1926668 | None:intergenic | 25.0% |
| ! | GCAAATTTATCATTCTTACA+GGG | + | chr1_3:1926996-1927015 | None:intergenic | 25.0% |
| ! | AGATTAAACAATACTGTTAG+AGG | + | chr1_3:1927293-1927312 | None:intergenic | 25.0% |
| !! | CAGTATTGTTTAATCTCTTT+TGG | - | chr1_3:1927297-1927316 | Msa0096240:intron | 25.0% |
| ! | CAAGAAACAAACAGTAATTA+AGG | - | chr1_3:1927480-1927499 | Msa0096240:intron | 25.0% |
| !!! | AATAATGATAATGGTAGTAG+AGG | - | chr1_3:1927531-1927550 | Msa0096240:intron | 25.0% |
| !!! | ATAATGATAATGGTAGTAGA+GGG | - | chr1_3:1927532-1927551 | Msa0096240:intron | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | - | chr1_3:1927713-1927732 | Msa0096240:intron | 25.0% |
| ! | TAATTAGTAGGTGGTTAATT+AGG | + | chr1_3:1926573-1926592 | None:intergenic | 25.0% |
| !!! | TGTTTTAAGTAATTAGTAGG+TGG | + | chr1_3:1928398-1928417 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTAAGTAATTAGT+AGG | + | chr1_3:1928401-1928420 | None:intergenic | 25.0% |
| !! | TTATGTCATTTGATTAAGAG+GGG | - | chr1_3:1928503-1928522 | Msa0096240:intron | 25.0% |
| ! | CAAAATAGAATTCTAACGTA+AGG | + | chr1_3:1928540-1928559 | None:intergenic | 25.0% |
| !! | CTTACGTTAGAATTCTATTT+TGG | - | chr1_3:1928538-1928557 | Msa0096240:intron | 25.0% |
| !! | CAACTTCAATTCTTTTAGTA+AGG | + | chr1_3:1928588-1928607 | None:intergenic | 25.0% |
| ! | CTTACTAAAAGAATTGAAGT+TGG | - | chr1_3:1928586-1928605 | Msa0096240:intron | 25.0% |
| ! | ATCAAACAACTCTAATAGTT+GGG | + | chr1_3:1928705-1928724 | None:intergenic | 25.0% |
| ! | TATCAAACAACTCTAATAGT+TGG | + | chr1_3:1928706-1928725 | None:intergenic | 25.0% |
| ! | ATAAAAAATTTGTGGAACAG+AGG | - | chr1_3:1928789-1928808 | Msa0096240:intron | 25.0% |
| ! | ATAAAATTCGACTAGAAAAG+GGG | + | chr1_3:1928847-1928866 | None:intergenic | 25.0% |
| ! | CAATAAAATTCGACTAGAAA+AGG | + | chr1_3:1928849-1928868 | None:intergenic | 25.0% |
| !! | TTCTAGTCGAATTTTATTGA+TGG | - | chr1_3:1928850-1928869 | Msa0096240:intron | 25.0% |
| ! | TATTGATGGAAAGAAAAAAC+GGG | - | chr1_3:1928864-1928883 | Msa0096240:intron | 25.0% |
| ! | CTTGAAAGAAGAACTTAAAA+TGG | + | chr1_3:1929138-1929157 | None:intergenic | 25.0% |
| ! | CTTCTTTCAAGATATTTGTA+TGG | - | chr1_3:1929147-1929166 | Msa0096240:intron | 25.0% |
| !! | ATTTGTATGGAATTCTGTTT+TGG | - | chr1_3:1929160-1929179 | Msa0096240:intron | 25.0% |
| !!! | AAGGTATTGAAAATATGTCT+AGG | - | chr1_3:1929378-1929397 | Msa0096240:intron | 25.0% |
| ! | TGTATCAAACTTAGGTAATA+CGG | + | chr1_3:1929512-1929531 | None:intergenic | 25.0% |
| !! | TTGCGAAATTTTATGCTTTT+AGG | - | chr1_3:1929538-1929557 | Msa0096240:intron | 25.0% |
| ! | TTGATATTACAAGCTAAGAT+AGG | - | chr1_3:1929661-1929680 | Msa0096240:intron | 25.0% |
| !! | TCCATCGAAAATCAATTTTA+CGG | - | chr1_3:1929919-1929938 | Msa0096240:intron | 25.0% |
| ! | ATTACATAAAAGTTTACCTC+CGG | - | chr1_3:1930170-1930189 | Msa0096240:intron | 25.0% |
| ! | AAATATCTTCTTTCCGATTT+CGG | + | chr1_3:1930348-1930367 | None:intergenic | 25.0% |
| !! | AAATCGGAAAGAAGATATTT+TGG | - | chr1_3:1930348-1930367 | Msa0096240:intron | 25.0% |
| ! | AAAACAAACTTAGTAGTTCA+GGG | - | chr1_3:1930410-1930429 | Msa0096240:intron | 25.0% |
| ! | CATCCCTAATCATATAAAAA+GGG | + | chr1_3:1930535-1930554 | None:intergenic | 25.0% |
| ! | ACATCCCTAATCATATAAAA+AGG | + | chr1_3:1930536-1930555 | None:intergenic | 25.0% |
| !!! | CAAATGAAACTTTTTCTTTC+TGG | + | chr1_3:1930772-1930791 | None:intergenic | 25.0% |
| !! | AATCAAGTCATCTAGAATAT+TGG | + | chr1_3:1930824-1930843 | None:intergenic | 25.0% |
| !!! | TGTTTGGTTCAATTTTTAGA+AGG | - | chr1_3:1930961-1930980 | Msa0096240:intron | 25.0% |
| !!! | GTTTGGTTCAATTTTTAGAA+GGG | - | chr1_3:1930962-1930981 | Msa0096240:intron | 25.0% |
| !!! | TTTGGTTCAATTTTTAGAAG+GGG | - | chr1_3:1930963-1930982 | Msa0096240:intron | 25.0% |
| !!! | GGAATAATGGATTAGTAATA+GGG | + | chr1_3:1931264-1931283 | None:intergenic | 25.0% |
| !!! | TGGAATAATGGATTAGTAAT+AGG | + | chr1_3:1931265-1931284 | None:intergenic | 25.0% |
| !!! | ATTAGAATTCTATTTTGGCT+AGG | - | chr1_3:1931526-1931545 | Msa0096240:intron | 25.0% |
| !! | CAACTTCAATTCTTTTAGTA+AGG | + | chr1_3:1928588-1928607 | None:intergenic | 25.0% |
| ! | CTTACTAAAAGAATTGAAGT+TGG | - | chr1_3:1928586-1928605 | Msa0096240:intron | 25.0% |
| ! | ATAAAAAATTTGTGGAACAG+AGG | - | chr1_3:1928789-1928808 | Msa0096240:intron | 25.0% |
| ! | ATAAAATTCGACTAGAAAAG+GGG | + | chr1_3:1928847-1928866 | None:intergenic | 25.0% |
| ! | CAATAAAATTCGACTAGAAA+AGG | + | chr1_3:1928849-1928868 | None:intergenic | 25.0% |
| !! | TTCTAGTCGAATTTTATTGA+TGG | - | chr1_3:1928850-1928869 | Msa0096240:intron | 25.0% |
| ! | TATTGATGGAAAGAAAAAAC+GGG | - | chr1_3:1928864-1928883 | Msa0096240:intron | 25.0% |
| !!! | TTAAGGTTTGTATTGATTAG+AGG | - | chr1_3:1931873-1931892 | Msa0096240:intron | 25.0% |
| !!! | TAAGGTTTGTATTGATTAGA+GGG | - | chr1_3:1931874-1931893 | Msa0096240:intron | 25.0% |
| ! | CTTGAAAGAAGAACTTAAAA+TGG | + | chr1_3:1929138-1929157 | None:intergenic | 25.0% |
| ! | CTTCTTTCAAGATATTTGTA+TGG | - | chr1_3:1929147-1929166 | Msa0096240:intron | 25.0% |
| !! | ATTTGTATGGAATTCTGTTT+TGG | - | chr1_3:1929160-1929179 | Msa0096240:intron | 25.0% |
| !!! | AAGGTATTGAAAATATGTCT+AGG | - | chr1_3:1929378-1929397 | Msa0096240:intron | 25.0% |
| ! | TGTATCAAACTTAGGTAATA+CGG | + | chr1_3:1929512-1929531 | None:intergenic | 25.0% |
| ! | TTGATATTACAAGCTAAGAT+AGG | - | chr1_3:1929661-1929680 | Msa0096240:intron | 25.0% |
| ! | TCGTGACAAAAAAAAGATAA+AGG | + | chr1_3:1933200-1933219 | None:intergenic | 25.0% |
| !!! | CGAGTATGATGAATTTTTTT+TGG | + | chr1_3:1933290-1933309 | None:intergenic | 25.0% |
| ! | AAATATCTTCTTTCCGATTT+CGG | + | chr1_3:1930348-1930367 | None:intergenic | 25.0% |
| !! | AAATCGGAAAGAAGATATTT+TGG | - | chr1_3:1930348-1930367 | Msa0096240:intron | 25.0% |
| ! | AAAACAAACTTAGTAGTTCA+GGG | - | chr1_3:1930410-1930429 | Msa0096240:intron | 25.0% |
| ! | CATCCCTAATCATATAAAAA+GGG | + | chr1_3:1930535-1930554 | None:intergenic | 25.0% |
| ! | ACATCCCTAATCATATAAAA+AGG | + | chr1_3:1930536-1930555 | None:intergenic | 25.0% |
| !!! | CAAATGAAACTTTTTCTTTC+TGG | + | chr1_3:1930772-1930791 | None:intergenic | 25.0% |
| ! | CATGACTTTACATTTGTATA+AGG | + | chr1_3:1934230-1934249 | None:intergenic | 25.0% |
| ! | CTTATACAAATGTAAAGTCA+TGG | - | chr1_3:1934228-1934247 | Msa0096240:intron | 25.0% |
| ! | TATACAAATGTAAAGTCATG+GGG | - | chr1_3:1934230-1934249 | Msa0096240:intron | 25.0% |
| !! | AACTAAGAATAAGGTGTTAT+GGG | - | chr1_3:1934273-1934292 | Msa0096240:intron | 25.0% |
| ! | TTATGGGTAAACCAAAAATA+CGG | - | chr1_3:1934289-1934308 | Msa0096240:intron | 25.0% |
| ! | AGAAATACAGATGAAATTGA+TGG | + | chr1_3:1934541-1934560 | None:intergenic | 25.0% |
| ! | TCAGCATTTATAGTATCATT+AGG | + | chr1_3:1934788-1934807 | None:intergenic | 25.0% |
| ! | GGAAGAATATGAAAAAAGAA+AGG | - | chr1_3:1934982-1935001 | Msa0096240:CDS | 25.0% |
| !! | CATTATTAGAAGGTTTTACT+TGG | + | chr1_3:1935009-1935028 | None:intergenic | 25.0% |
| !! | TTAGTGAATTGAACTGTTTT+AGG | - | chr1_3:1935134-1935153 | Msa0096240:intron | 25.0% |
| !! | TATTGAAACAAGTATTGCAA+AGG | + | chr1_3:1935183-1935202 | None:intergenic | 25.0% |
| GATTATTGCCTTTAGATCAT+CGG | + | chr1_3:1923060-1923079 | None:intergenic | 30.0% | |
| ATTTGAACCTGAAGAACTTT+GGG | + | chr1_3:1923227-1923246 | None:intergenic | 30.0% | |
| AATTTGAACCTGAAGAACTT+TGG | + | chr1_3:1923228-1923247 | None:intergenic | 30.0% | |
| AGTAGAAAGAGAAGAAAAAG+GGG | + | chr1_3:1923261-1923280 | None:intergenic | 30.0% | |
| TGGAATATGAGTGTATTCAA+CGG | + | chr1_3:1923552-1923571 | None:intergenic | 30.0% | |
| ACAACATTGTCAGGTAAAAA+TGG | + | chr1_3:1923572-1923591 | None:intergenic | 30.0% | |
| GTAATTCTTTGGCAATACAA+AGG | + | chr1_3:1923691-1923710 | None:intergenic | 30.0% | |
| CATATCTGACTGTAATTCTT+TGG | + | chr1_3:1923702-1923721 | None:intergenic | 30.0% | |
| CAAAGAATTACAGTCAGATA+TGG | - | chr1_3:1923700-1923719 | Msa0096240:intron | 30.0% | |
| !!! | GCATACCATTTTTGAAATTG+TGG | - | chr1_3:1923789-1923808 | Msa0096240:intron | 30.0% |
| !!! | TACCATTTTTGAAATTGTGG+GGG | - | chr1_3:1923792-1923811 | Msa0096240:intron | 30.0% |
| AATTTGCATGGCAATATTCA+TGG | + | chr1_3:1924061-1924080 | None:intergenic | 30.0% | |
| ! | TATTGCCATGCAAATTTTGA+TGG | - | chr1_3:1924065-1924084 | Msa0096240:intron | 30.0% |
| !!! | GCTTACCTTGTTTTTTGTTA+CGG | - | chr1_3:1924128-1924147 | Msa0096240:intron | 30.0% |
| CATTAGTAAACACATAACAG+AGG | + | chr1_3:1924248-1924267 | None:intergenic | 30.0% | |
| ATAGTATTGTGTGTTTGCAT+TGG | - | chr1_3:1924320-1924339 | Msa0096240:intron | 30.0% | |
| AATAAAGTTCCAGTTCATAG+TGG | - | chr1_3:1924359-1924378 | Msa0096240:intron | 30.0% | |
| CAGATGAACCAAAAATATTC+AGG | - | chr1_3:1924452-1924471 | Msa0096240:intron | 30.0% | |
| AATGCTTATTATTAGGAGCA+TGG | - | chr1_3:1924685-1924704 | Msa0096240:CDS | 30.0% | |
| ATGTGTGTGAATTTGCAATT+TGG | + | chr1_3:1924797-1924816 | None:intergenic | 30.0% | |
| AGAGTTAGTAAAAAGCAAAG+CGG | - | chr1_3:1925117-1925136 | Msa0096240:intron | 30.0% | |
| !!! | TTGCCACGTTGTTTTTTTAT+CGG | + | chr1_3:1925203-1925222 | None:intergenic | 30.0% |
| AAACAAGATTCACTGAACTT+GGG | + | chr1_3:1925253-1925272 | None:intergenic | 30.0% | |
| AAAACAAGATTCACTGAACT+TGG | + | chr1_3:1925254-1925273 | None:intergenic | 30.0% | |
| !! | ACTGACCTTTATAGTCTTAT+AGG | + | chr1_3:1925591-1925610 | None:intergenic | 30.0% |
| CTACATTGAGCTTCAATATT+TGG | - | chr1_3:1925656-1925675 | Msa0096240:intron | 30.0% | |
| AGAATTTAGATGTCACTCTT+TGG | - | chr1_3:1925815-1925834 | Msa0096240:intron | 30.0% | |
| AAATTGCCAAGAAACAAAGA+TGG | - | chr1_3:1925959-1925978 | Msa0096240:intron | 30.0% | |
| AATTGCCAAGAAACAAAGAT+GGG | - | chr1_3:1925960-1925979 | Msa0096240:intron | 30.0% | |
| CTCCAAAAAGAGTAGAATAA+TGG | - | chr1_3:1925985-1926004 | Msa0096240:intron | 30.0% | |
| ! | TCCCATTATTCTACTCTTTT+TGG | + | chr1_3:1925990-1926009 | None:intergenic | 30.0% |
| CAGGATTATATCCAACATTT+GGG | - | chr1_3:1926020-1926039 | Msa0096240:intron | 30.0% | |
| ATCTTCAATTTCCCAAATGT+TGG | + | chr1_3:1926034-1926053 | None:intergenic | 30.0% | |
| ATCTAAATTACGATGTAGGT+TGG | + | chr1_3:1926199-1926218 | None:intergenic | 30.0% | |
| CATTAGGTAAGAAGAAATAG+TGG | + | chr1_3:1926280-1926299 | None:intergenic | 30.0% | |
| !!! | GTTTTAATTTTGTGCATCTG+TGG | + | chr1_3:1926387-1926406 | None:intergenic | 30.0% |
| ATTCATATGCAACCAATTGA+CGG | - | chr1_3:1926495-1926514 | Msa0096240:intron | 30.0% | |
| ! | CTTAAAGTACTCTATCAGAT+TGG | + | chr1_3:1926553-1926572 | None:intergenic | 30.0% |
| TAAATAATAAGAGGCCCATT+AGG | - | chr1_3:1926631-1926650 | Msa0096240:intron | 30.0% | |
| AAATAATAAGAGGCCCATTA+GGG | - | chr1_3:1926632-1926651 | Msa0096240:intron | 30.0% | |
| !!! | GTTTCTTCTTCTTGCTTTTT+CGG | - | chr1_3:1926860-1926879 | Msa0096240:intron | 30.0% |
| !!! | TTTCTTCTTCTTGCTTTTTC+GGG | - | chr1_3:1926861-1926880 | Msa0096240:intron | 30.0% |
| GGCAAATTTATCATTCTTAC+AGG | + | chr1_3:1926997-1927016 | None:intergenic | 30.0% | |
| ATCAATTCCTGAGCTATTTA+TGG | - | chr1_3:1927251-1927270 | Msa0096240:intron | 30.0% | |
| TTAAACAATACTGTTAGAGG+CGG | + | chr1_3:1927290-1927309 | None:intergenic | 30.0% | |
| ATATTCAAAGCTGAACCAAA+CGG | + | chr1_3:1927639-1927658 | None:intergenic | 30.0% | |
| !!! | TTTTTGGCTAGAATTGCTTT+TGG | - | chr1_3:1928031-1928050 | Msa0096240:CDS | 30.0% |
| !! | CACTGTAGAGAATTGATTTT+GGG | - | chr1_3:1928054-1928073 | Msa0096240:CDS | 30.0% |
| AATAGAATGTTCTCTTTAGG+CGG | + | chr1_3:1928301-1928320 | None:intergenic | 30.0% | |
| GCTAGGGTAAAATAATAAGA+GGG | + | chr1_3:1928339-1928358 | None:intergenic | 30.0% | |
| !! | CTCTTATTATTTTACCCTAG+CGG | - | chr1_3:1928338-1928357 | Msa0096240:intron | 30.0% |
| !! | TCTTATTATTTTACCCTAGC+GGG | - | chr1_3:1928339-1928358 | Msa0096240:intron | 30.0% |
| CTTAAAACACCATCTCATAT+TGG | - | chr1_3:1928409-1928428 | Msa0096240:intron | 30.0% | |
| ! | AGTCAAGTCATCTAGAATAT+TGG | + | chr1_3:1928441-1928460 | None:intergenic | 30.0% |
| ! | TACATGGGTTATGTCTAAAT+TGG | - | chr1_3:1928467-1928486 | Msa0096240:intron | 30.0% |
| !!! | GTTAGAATTCTATTTTGGCT+AGG | - | chr1_3:1928543-1928562 | Msa0096240:intron | 30.0% |
| AACTCTAATAGTTGGGTTAA+TGG | + | chr1_3:1928698-1928717 | None:intergenic | 30.0% | |
| !! | TTGAGGTTTGTATTGATTAG+AGG | - | chr1_3:1928890-1928909 | Msa0096240:intron | 30.0% |
| !! | TGAGGTTTGTATTGATTAGA+GGG | - | chr1_3:1928891-1928910 | Msa0096240:intron | 30.0% |
| TTCTTCTACTGCCAAAAATT+GGG | + | chr1_3:1928947-1928966 | None:intergenic | 30.0% | |
| ATTCTTCTACTGCCAAAAAT+TGG | + | chr1_3:1928948-1928967 | None:intergenic | 30.0% | |
| ! | TCTTATGCTCATATTCCTTT+TGG | + | chr1_3:1929032-1929051 | None:intergenic | 30.0% |
| AATCATCAAGTATCAGATGT+GGG | + | chr1_3:1929076-1929095 | None:intergenic | 30.0% | |
| TTTCAGCCAATAATGGTTTA+TGG | - | chr1_3:1929313-1929332 | Msa0096240:intron | 30.0% | |
| CTTGTTCCATAAACCATTAT+TGG | + | chr1_3:1929322-1929341 | None:intergenic | 30.0% | |
| ATGGTTTATGGAACAAGAAA+AGG | - | chr1_3:1929325-1929344 | Msa0096240:intron | 30.0% | |
| TGTCTTACATGATTAGACAA+TGG | + | chr1_3:1929422-1929441 | None:intergenic | 30.0% | |
| TTGTCTAATCATGTAAGACA+AGG | - | chr1_3:1929422-1929441 | Msa0096240:intron | 30.0% | |
| TGTCTAATCATGTAAGACAA+GGG | - | chr1_3:1929423-1929442 | Msa0096240:intron | 30.0% | |
| TAGTGATTGATCCTACTAAA+AGG | - | chr1_3:1929834-1929853 | Msa0096240:intron | 30.0% | |
| !! | ACCGTAAAATTGATTTTCGA+TGG | + | chr1_3:1929923-1929942 | None:intergenic | 30.0% |
| TTACATAAAAGTTTACCTCC+GGG | - | chr1_3:1930171-1930190 | Msa0096240:intron | 30.0% | |
| CAAACAATTAATCTTCTACC+CGG | + | chr1_3:1930192-1930211 | None:intergenic | 30.0% | |
| TTAGAGTAAATGTGAATTGC+AGG | - | chr1_3:1930238-1930257 | Msa0096240:intron | 30.0% | |
| GAAAACAAACTTAGTAGTTC+AGG | - | chr1_3:1930409-1930428 | Msa0096240:intron | 30.0% | |
| ! | CTGCCCTTTTTATATGATTA+GGG | - | chr1_3:1930529-1930548 | Msa0096240:intron | 30.0% |
| ! | AGATGCAACTTTCTCTTTTA+TGG | + | chr1_3:1930591-1930610 | None:intergenic | 30.0% |
| ATAAAAGAGAAAGTTGCATC+TGG | - | chr1_3:1930590-1930609 | Msa0096240:intron | 30.0% | |
| GAAATAAGCAGAAGAATAAC+AGG | + | chr1_3:1930702-1930721 | None:intergenic | 30.0% | |
| GTAATACAGTAGTAATCTTG+AGG | - | chr1_3:1930729-1930748 | Msa0096240:intron | 30.0% | |
| TGACTTGATTAGAGATTACA+TGG | - | chr1_3:1930834-1930853 | Msa0096240:intron | 30.0% | |
| GACTTGATTAGAGATTACAT+GGG | - | chr1_3:1930835-1930854 | Msa0096240:intron | 30.0% | |
| ! | TACATGGGTTATGTCTAAAT+TGG | - | chr1_3:1928467-1928486 | Msa0096240:intron | 30.0% |
| !! | TTCAATTTTTAGAAGGGGAT+GGG | - | chr1_3:1930968-1930987 | Msa0096240:intron | 30.0% |
| ATCAAACAACTCCAATAGTT+GGG | + | chr1_3:1931688-1931707 | None:intergenic | 30.0% | |
| TATCAAACAACTCCAATAGT+TGG | + | chr1_3:1931689-1931708 | None:intergenic | 30.0% | |
| TTCTTCTACTGCCAAAAATT+GGG | + | chr1_3:1928947-1928966 | None:intergenic | 30.0% | |
| ATTCTTCTACTGCCAAAAAT+TGG | + | chr1_3:1928948-1928967 | None:intergenic | 30.0% | |
| ! | TCTTATGCTCATATTCCTTT+TGG | + | chr1_3:1929032-1929051 | None:intergenic | 30.0% |
| AATCATCAAGTATCAGATGT+GGG | + | chr1_3:1929076-1929095 | None:intergenic | 30.0% | |
| TTTCAGCCAATAATGGTTTA+TGG | - | chr1_3:1929313-1929332 | Msa0096240:intron | 30.0% | |
| CTTGTTCCATAAACCATTAT+TGG | + | chr1_3:1929322-1929341 | None:intergenic | 30.0% | |
| ATGGTTTATGGAACAAGAAA+AGG | - | chr1_3:1929325-1929344 | Msa0096240:intron | 30.0% | |
| TGTCTTACATGATTAGACAA+TGG | + | chr1_3:1929422-1929441 | None:intergenic | 30.0% | |
| TTGTCTAATCATGTAAGACA+AGG | - | chr1_3:1929422-1929441 | Msa0096240:intron | 30.0% | |
| TGTCTAATCATGTAAGACAA+GGG | - | chr1_3:1929423-1929442 | Msa0096240:intron | 30.0% | |
| !! | GAATTTGATGCTTTTAGGAA+AGG | - | chr1_3:1932544-1932563 | Msa0096240:intron | 30.0% |
| TAGTGATTGATCCTACTAAA+AGG | - | chr1_3:1929834-1929853 | Msa0096240:intron | 30.0% | |
| ! | TCCGTCGAAAATCAATTTTA+CGG | - | chr1_3:1932920-1932939 | Msa0096240:intron | 30.0% |
| !! | ACCGTAAAATTGATTTTCGA+CGG | + | chr1_3:1929923-1929942 | None:intergenic | 30.0% |
| CACAGAATAAAAGAAGAAAG+AGG | + | chr1_3:1933493-1933512 | None:intergenic | 30.0% | |
| TTACATAAAAGTTTACCTCC+AGG | - | chr1_3:1930171-1930190 | Msa0096240:intron | 30.0% | |
| CAAACAATTAATCTTCTACC+TGG | + | chr1_3:1930192-1930211 | None:intergenic | 30.0% | |
| TTAGAGTAAATGTGAATTGC+AGG | - | chr1_3:1930238-1930257 | Msa0096240:intron | 30.0% | |
| ! | GCAGATTATAACTTTAGAAG+TGG | - | chr1_3:1933621-1933640 | Msa0096240:intron | 30.0% |
| GAAAACAAACTTAGTAGTTC+AGG | - | chr1_3:1930409-1930428 | Msa0096240:intron | 30.0% | |
| ! | CTGCCCTTTTTATATGATTA+GGG | - | chr1_3:1930529-1930548 | Msa0096240:intron | 30.0% |
| ! | AGATGCAACTTTCTCTTTTA+TGG | + | chr1_3:1930591-1930610 | None:intergenic | 30.0% |
| ATAAAAGAGAAAGTTGCATC+TGG | - | chr1_3:1930590-1930609 | Msa0096240:intron | 30.0% | |
| GAAATAAGCAGAAGAATAAC+AGG | + | chr1_3:1930702-1930721 | None:intergenic | 30.0% | |
| GTAATACAGTAGTAATCTTG+AGG | - | chr1_3:1930729-1930748 | Msa0096240:intron | 30.0% | |
| ATACAAATGTAAAGTCATGG+GGG | - | chr1_3:1934231-1934250 | Msa0096240:intron | 30.0% | |
| TGGGAATACAACTAAGAATA+AGG | - | chr1_3:1934264-1934283 | Msa0096240:intron | 30.0% | |
| ! | CAACTAAGAATAAGGTGTTA+TGG | - | chr1_3:1934272-1934291 | Msa0096240:intron | 30.0% |
| TATGGGTAAACCAAAAATAC+GGG | - | chr1_3:1934290-1934309 | Msa0096240:intron | 30.0% | |
| TATGGAAAAGAAGACTAGTA+AGG | - | chr1_3:1934318-1934337 | Msa0096240:intron | 30.0% | |
| ! | ATTCATAATAGAGGGTATGA+TGG | - | chr1_3:1934402-1934421 | Msa0096240:intron | 30.0% |
| ACACAGAAATATCTATTCTC+TGG | + | chr1_3:1934444-1934463 | None:intergenic | 30.0% | |
| ! | GAGAATAGATATTTCTGTGT+CGG | - | chr1_3:1934444-1934463 | Msa0096240:intron | 30.0% |
| GATAAAGGAAAATGTAGTAG+AGG | + | chr1_3:1934499-1934518 | None:intergenic | 30.0% | |
| ! | TTTTTCTGATTGATCAGTTC+TGG | + | chr1_3:1934618-1934637 | None:intergenic | 30.0% |
| AATTTCACTTAACTGGGAAA+AGG | + | chr1_3:1934689-1934708 | None:intergenic | 30.0% | |
| ATTTGTTCTTGTTACAGTTG+TGG | - | chr1_3:1934820-1934839 | Msa0096240:intron | 30.0% | |
| AAAACCTTCTAATAATGACG+AGG | - | chr1_3:1935012-1935031 | Msa0096240:intron | 30.0% | |
| ATCTGATGATAGCTATCAAA+TGG | - | chr1_3:1935288-1935307 | Msa0096240:CDS | 30.0% | |
| TCTGATGATAGCTATCAAAT+GGG | - | chr1_3:1935289-1935308 | Msa0096240:CDS | 30.0% | |
| AATAGAAACCCTAAGAAGGA+AGG | - | chr1_3:1923016-1923035 | Msa0096240:intron | 35.0% | |
| ATAGAAACCCTAAGAAGGAA+GGG | - | chr1_3:1923017-1923036 | Msa0096240:intron | 35.0% | |
| GTAGAAAGAGAAGAAAAAGG+GGG | + | chr1_3:1923260-1923279 | None:intergenic | 35.0% | |
| ! | AAATTAGTCTCCGACTTTGA+AGG | + | chr1_3:1923337-1923356 | None:intergenic | 35.0% |
| TTCAAAGTCGGAGACTAATT+TGG | - | chr1_3:1923336-1923355 | Msa0096240:intron | 35.0% | |
| TTCAACAGATATCTTCAGTG+AGG | - | chr1_3:1923429-1923448 | Msa0096240:CDS | 35.0% | |
| TCAACAGATATCTTCAGTGA+GGG | - | chr1_3:1923430-1923449 | Msa0096240:CDS | 35.0% | |
| TGACTGTGACTTAAAAGCTT+AGG | + | chr1_3:1923647-1923666 | None:intergenic | 35.0% | |
| !!! | ACCATTTTTGAAATTGTGGG+GGG | - | chr1_3:1923793-1923812 | Msa0096240:intron | 35.0% |
| TTATTGTGGCCACAGTATAA+AGG | - | chr1_3:1923918-1923937 | Msa0096240:intron | 35.0% | |
| TCATGCCATCAAAATTTGCA+TGG | + | chr1_3:1924073-1924092 | None:intergenic | 35.0% | |
| TGTAGCCGTAACAAAAAACA+AGG | + | chr1_3:1924136-1924155 | None:intergenic | 35.0% | |
| CCTAATACAGTCAATGCTTT+AGG | + | chr1_3:1924401-1924420 | None:intergenic | 35.0% | |
| !! | CCTAAAGCATTGACTGTATT+AGG | - | chr1_3:1924398-1924417 | Msa0096240:intron | 35.0% |
| !! | AAAGCATTGACTGTATTAGG+AGG | - | chr1_3:1924401-1924420 | Msa0096240:CDS | 35.0% |
| ! | GATTTTCTCGGTCATCTATA+AGG | - | chr1_3:1924474-1924493 | Msa0096240:intron | 35.0% |
| !! | GCTTTTGCTTTAAACAGAGA+CGG | - | chr1_3:1924625-1924644 | Msa0096240:intron | 35.0% |
| TTCTATACTCGAACGATCTT+CGG | + | chr1_3:1924731-1924750 | None:intergenic | 35.0% | |
| GTGTGAATTTGCAATTTGGT+AGG | + | chr1_3:1924793-1924812 | None:intergenic | 35.0% | |
| CAACCGATAAAAAAACAACG+TGG | - | chr1_3:1925197-1925216 | Msa0096240:intron | 35.0% | |
| ! | TTGGGTAATGACAGGTTTTA+TGG | - | chr1_3:1925737-1925756 | Msa0096240:intron | 35.0% |
| !! | TGGGTAATGACAGGTTTTAT+GGG | - | chr1_3:1925738-1925757 | Msa0096240:intron | 35.0% |
| !! | TAATGACAGGTTTTATGGGA+AGG | - | chr1_3:1925742-1925761 | Msa0096240:intron | 35.0% |
| !! | AATGACAGGTTTTATGGGAA+GGG | - | chr1_3:1925743-1925762 | Msa0096240:intron | 35.0% |
| ATTGCCAAGAAACAAAGATG+GGG | - | chr1_3:1925961-1925980 | Msa0096240:intron | 35.0% | |
| ! | ATAATGGGAGAAAATGTTGC+AGG | - | chr1_3:1926001-1926020 | Msa0096240:intron | 35.0% |
| GCAGGATTATATCCAACATT+TGG | - | chr1_3:1926019-1926038 | Msa0096240:intron | 35.0% | |
| AGCATTTGCAAAAGCTTCAT+TGG | - | chr1_3:1926074-1926093 | Msa0096240:intron | 35.0% | |
| GCATTTGCAAAAGCTTCATT+GGG | - | chr1_3:1926075-1926094 | Msa0096240:intron | 35.0% | |
| CATTTGCAAAAGCTTCATTG+GGG | - | chr1_3:1926076-1926095 | Msa0096240:intron | 35.0% | |
| ! | CCAAATCCTTTTGTATTACG+AGG | + | chr1_3:1926144-1926163 | None:intergenic | 35.0% |
| CCTCGTAATACAAAAGGATT+TGG | - | chr1_3:1926141-1926160 | Msa0096240:intron | 35.0% | |
| GGGTATCTAAATTACGATGT+AGG | + | chr1_3:1926203-1926222 | None:intergenic | 35.0% | |
| CTTACCTAATGAAGGAACAT+AGG | - | chr1_3:1926289-1926308 | Msa0096240:intron | 35.0% | |
| GAAACCTATGTTCCTTCATT+AGG | + | chr1_3:1926296-1926315 | None:intergenic | 35.0% | |
| !!! | AGTATTTTTAGAGAGGGTGA+AGG | - | chr1_3:1926416-1926435 | Msa0096240:intron | 35.0% |
| CAATTGACGGTATAGATTCA+CGG | - | chr1_3:1926508-1926527 | Msa0096240:intron | 35.0% | |
| AATTGACGGTATAGATTCAC+GGG | - | chr1_3:1926509-1926528 | Msa0096240:intron | 35.0% | |
| CTTACGAATGATGAGTATGA+CGG | - | chr1_3:1926699-1926718 | Msa0096240:intron | 35.0% | |
| TGACGGAATAAGTTTCTGTT+AGG | - | chr1_3:1926716-1926735 | Msa0096240:intron | 35.0% | |
| CTTAAAGAGGAATCATACTC+TGG | + | chr1_3:1926743-1926762 | None:intergenic | 35.0% | |
| !! | GATTCCTCTTTAAGTTGTGT+TGG | - | chr1_3:1926749-1926768 | Msa0096240:intron | 35.0% |
| !!! | TTCTTCTTCTTGCTTTTTCG+GGG | - | chr1_3:1926862-1926881 | Msa0096240:intron | 35.0% |
| !! | CTTTTGTGGTTGTTTCAGTT+TGG | + | chr1_3:1927040-1927059 | None:intergenic | 35.0% |
| CAAACTGAAACAACCACAAA+AGG | - | chr1_3:1927038-1927057 | Msa0096240:intron | 35.0% | |
| !! | AACCACAAAAGGTATTCGAT+CGG | - | chr1_3:1927049-1927068 | Msa0096240:intron | 35.0% |
| GTGTTTAATGACAGCAATGA+AGG | + | chr1_3:1927087-1927106 | None:intergenic | 35.0% | |
| ! | AAACACTTCATTGTCGTTTG+AGG | - | chr1_3:1927101-1927120 | Msa0096240:intron | 35.0% |
| TAAACAATACTGTTAGAGGC+GGG | + | chr1_3:1927289-1927308 | None:intergenic | 35.0% | |
| ACCAATTTGGTAGAAACCAA+AGG | - | chr1_3:1927423-1927442 | Msa0096240:intron | 35.0% | |
| ! | TCCTTTGGTTTCTACCAAAT+TGG | + | chr1_3:1927427-1927446 | None:intergenic | 35.0% |
| ! | TGTTTCTGTTGTTCGATTAC+AGG | + | chr1_3:1927451-1927470 | None:intergenic | 35.0% |
| TATTCAAAGCTGAACCAAAC+GGG | + | chr1_3:1927638-1927657 | None:intergenic | 35.0% | |
| AAACCTATACACGTTGTTCA+AGG | - | chr1_3:1927907-1927926 | Msa0096240:intron | 35.0% | |
| ! | TTCTAGAAAAGCTAGAAGCT+AGG | - | chr1_3:1927938-1927957 | Msa0096240:intron | 35.0% |
| !! | TGAACCAAACACGTTGTTTT+TGG | - | chr1_3:1928015-1928034 | Msa0096240:intron | 35.0% |
| !! | GCACTGTAGAGAATTGATTT+TGG | - | chr1_3:1928053-1928072 | Msa0096240:CDS | 35.0% |
| TAATATTTACTCCTTCGTCC+AGG | - | chr1_3:1928215-1928234 | Msa0096240:intron | 35.0% | |
| ATAGAATGTTCTCTTTAGGC+GGG | + | chr1_3:1928300-1928319 | None:intergenic | 35.0% | |
| AAATAATAAGAGGGCCGTTA+GGG | + | chr1_3:1928330-1928349 | None:intergenic | 35.0% | |
| AAAATAATAAGAGGGCCGTT+AGG | + | chr1_3:1928331-1928350 | None:intergenic | 35.0% | |
| CGCTAGGGTAAAATAATAAG+AGG | + | chr1_3:1928340-1928359 | None:intergenic | 35.0% | |
| TATTATTAAGTGACCCGCTA+GGG | + | chr1_3:1928355-1928374 | None:intergenic | 35.0% | |
| TTATTATTAAGTGACCCGCT+AGG | + | chr1_3:1928356-1928375 | None:intergenic | 35.0% | |
| TCTAATAGTTGGGTTAATGG+AGG | + | chr1_3:1928695-1928714 | None:intergenic | 35.0% | |
| ! | TGTGATTTTCAACAGCCATA+AGG | - | chr1_3:1928727-1928746 | Msa0096240:intron | 35.0% |
| AATTTGTGGAACAGAGGTTT+AGG | - | chr1_3:1928795-1928814 | Msa0096240:intron | 35.0% | |
| ATTTGTGGAACAGAGGTTTA+GGG | - | chr1_3:1928796-1928815 | Msa0096240:intron | 35.0% | |
| ! | ACCAAACAAACCCCAATTTT+TGG | - | chr1_3:1928933-1928952 | Msa0096240:intron | 35.0% |
| TCTTCTACTGCCAAAAATTG+GGG | + | chr1_3:1928946-1928965 | None:intergenic | 35.0% | |
| ! | TATGCTCATATTCCTTTTGG+CGG | + | chr1_3:1929029-1929048 | None:intergenic | 35.0% |
| GAATCATCAAGTATCAGATG+TGG | + | chr1_3:1929077-1929096 | None:intergenic | 35.0% | |
| ! | TGATACTTGATGATTCCTTC+TGG | - | chr1_3:1929081-1929100 | Msa0096240:intron | 35.0% |
| TGCATATTGTTCAATCCAGA+AGG | + | chr1_3:1929099-1929118 | None:intergenic | 35.0% | |
| ! | GGTCTTCTTTGACAACATTT+TGG | - | chr1_3:1929181-1929200 | Msa0096240:intron | 35.0% |
| !! | ACAACATTTTGGCGTACAAT+AGG | - | chr1_3:1929192-1929211 | Msa0096240:intron | 35.0% |
| ! | TTTTGGCGTACAATAGGAAT+TGG | - | chr1_3:1929198-1929217 | Msa0096240:intron | 35.0% |
| !!! | AGTGGATTTTTTCTGCCAAT+CGG | - | chr1_3:1929266-1929285 | Msa0096240:intron | 35.0% |
| CAATGGTTTCTTTCTTTGCA+TGG | + | chr1_3:1929405-1929424 | None:intergenic | 35.0% | |
| !! | TATGCTTTTAGGAAAGGAGT+AGG | - | chr1_3:1929549-1929568 | Msa0096240:intron | 35.0% |
| ! | TATGTGGCTTTGCATCAATA+CGG | + | chr1_3:1929577-1929596 | None:intergenic | 35.0% |
| GGTTGATCCCGAAATAATAA+TGG | - | chr1_3:1929805-1929824 | Msa0096240:intron | 35.0% | |
| ! | AAGGCTAGGCTATTTCATAA+GGG | - | chr1_3:1929859-1929878 | Msa0096240:intron | 35.0% |
| !!! | TTTTTTGGAAACTCGGTATC+CGG | + | chr1_3:1930029-1930048 | None:intergenic | 35.0% |
| ATGAATAGCTCACTCTCTTT+AGG | - | chr1_3:1930066-1930085 | Msa0096240:intron | 35.0% | |
| TGAATAGCTCACTCTCTTTA+GGG | - | chr1_3:1930067-1930086 | Msa0096240:intron | 35.0% | |
| !!! | TTTTTTTCACTACCCTGCTA+TGG | - | chr1_3:1930101-1930120 | Msa0096240:intron | 35.0% |
| ! | GCAGATTATAACTCTAGAAG+TGG | - | chr1_3:1930265-1930284 | Msa0096240:intron | 35.0% |
| AACTTAGTAGTTCAGGGTTA+AGG | - | chr1_3:1930416-1930435 | Msa0096240:intron | 35.0% | |
| ! | GCTGCCCTTTTTATATGATT+AGG | - | chr1_3:1930528-1930547 | Msa0096240:intron | 35.0% |
| CATTTGATTAAGACACCGTT+TGG | - | chr1_3:1930892-1930911 | Msa0096240:intron | 35.0% | |
| TCCAAAACTCTCAAACCAAA+CGG | + | chr1_3:1930910-1930929 | None:intergenic | 35.0% | |
| !!! | TTTGGTTTGAGAGTTTTGGA+GGG | - | chr1_3:1930910-1930929 | Msa0096240:intron | 35.0% |
| !! | GTTCAATTTTTAGAAGGGGA+TGG | - | chr1_3:1930967-1930986 | Msa0096240:intron | 35.0% |
| AACTCCAATAGTTGGGTTAA+TGG | + | chr1_3:1931681-1931700 | None:intergenic | 35.0% | |
| ! | TGTGATTTTCAACAGCCATA+AGG | - | chr1_3:1928727-1928746 | Msa0096240:intron | 35.0% |
| AATTTGTGGAACAGAGGTTT+AGG | - | chr1_3:1928795-1928814 | Msa0096240:intron | 35.0% | |
| ATTTGTGGAACAGAGGTTTA+GGG | - | chr1_3:1928796-1928815 | Msa0096240:intron | 35.0% | |
| AAAGAAAAAACGGGAGCTTA+AGG | - | chr1_3:1931856-1931875 | Msa0096240:intron | 35.0% | |
| ! | ACCAAACAAACCCCAATTTT+TGG | - | chr1_3:1928933-1928952 | Msa0096240:intron | 35.0% |
| TCTTCTACTGCCAAAAATTG+GGG | + | chr1_3:1928946-1928965 | None:intergenic | 35.0% | |
| ! | TATGCTCATATTCCTTTTGG+TGG | + | chr1_3:1929029-1929048 | None:intergenic | 35.0% |
| GAATCATCAAGTATCAGATG+TGG | + | chr1_3:1929077-1929096 | None:intergenic | 35.0% | |
| ! | TGATACTTGATGATTCCTTC+TGG | - | chr1_3:1929081-1929100 | Msa0096240:intron | 35.0% |
| TGCATATTGTTCAATCCAGA+AGG | + | chr1_3:1929099-1929118 | None:intergenic | 35.0% | |
| ! | GGTCTTCTTTGACAACATTT+TGG | - | chr1_3:1929181-1929200 | Msa0096240:intron | 35.0% |
| !! | ACAACATTTTGGCGTACAAT+AGG | - | chr1_3:1929192-1929211 | Msa0096240:intron | 35.0% |
| ! | TTTTGGCGTACAATAGGAAT+TGG | - | chr1_3:1929198-1929217 | Msa0096240:intron | 35.0% |
| !!! | AGTGGATTTTTTCTGCCAAT+CGG | - | chr1_3:1929266-1929285 | Msa0096240:intron | 35.0% |
| ! | TTGCGGAATTTGATGCTTTT+AGG | - | chr1_3:1932539-1932558 | Msa0096240:intron | 35.0% |
| ! | TATGTGGCTTTGCATCAATA+CGG | + | chr1_3:1929577-1929596 | None:intergenic | 35.0% |
| GGTTGATCCCGAAATAATAA+TGG | - | chr1_3:1929805-1929824 | Msa0096240:intron | 35.0% | |
| ! | AAGGCTAGGCTATTTCATAA+GGG | - | chr1_3:1929859-1929878 | Msa0096240:intron | 35.0% |
| AAGGGAGAATAGTGATGATT+CGG | - | chr1_3:1932878-1932897 | Msa0096240:intron | 35.0% | |
| !!! | TTTTTTGGAAACTCGGTATC+CGG | + | chr1_3:1930029-1930048 | None:intergenic | 35.0% |
| ATGAATAGCTCACTCTCTTT+AGG | - | chr1_3:1930066-1930085 | Msa0096240:intron | 35.0% | |
| TGAATAGCTCACTCTCTTTA+GGG | - | chr1_3:1930067-1930086 | Msa0096240:intron | 35.0% | |
| !!! | TTTTTTTCACTACCCTGCTA+TGG | - | chr1_3:1930101-1930120 | Msa0096240:intron | 35.0% |
| CAGAGGACTTATTCTTTCTT+CGG | - | chr1_3:1930124-1930143 | Msa0096240:intron | 35.0% | |
| ACAATTAATCTTCTACCTGG+AGG | + | chr1_3:1933545-1933564 | None:intergenic | 35.0% | |
| AACTTAGTAGTTCAGGGTTA+AGG | - | chr1_3:1930416-1930435 | Msa0096240:intron | 35.0% | |
| ! | GCTGCCCTTTTTATATGATT+AGG | - | chr1_3:1930528-1930547 | Msa0096240:intron | 35.0% |
| ATCTTGACATTTCTGTCACA+TGG | + | chr1_3:1934182-1934201 | None:intergenic | 35.0% | |
| ATGGGTAAACCAAAAATACG+GGG | - | chr1_3:1934291-1934310 | Msa0096240:intron | 35.0% | |
| TACGGAGCAATTCATAATAG+AGG | - | chr1_3:1934393-1934412 | Msa0096240:intron | 35.0% | |
| ACGGAGCAATTCATAATAGA+GGG | - | chr1_3:1934394-1934413 | Msa0096240:intron | 35.0% | |
| TTGAATCAACCATATCAGCA+TGG | - | chr1_3:1934893-1934912 | Msa0096240:CDS | 35.0% | |
| GGATGAAGTTGTATTTACTC+TGG | - | chr1_3:1934961-1934980 | Msa0096240:CDS | 35.0% | |
| AGAACCTCGTCATTATTAGA+AGG | + | chr1_3:1935019-1935038 | None:intergenic | 35.0% | |
| ATTTAACCTCGAACATTCTC+AGG | - | chr1_3:1935084-1935103 | Msa0096240:intron | 35.0% | |
| GCAAAGGTAGAATAATGAAC+AGG | + | chr1_3:1935167-1935186 | None:intergenic | 35.0% | |
| CAATATCCTGTGTCATGATT+AGG | - | chr1_3:1935198-1935217 | Msa0096240:intron | 35.0% | |
| TTTGTACCTAATCATGACAC+AGG | + | chr1_3:1935207-1935226 | None:intergenic | 35.0% | |
| TGTGTCATGATTAGGTACAA+AGG | - | chr1_3:1935206-1935225 | Msa0096240:intron | 35.0% | |
| GTGTCATGATTAGGTACAAA+GGG | - | chr1_3:1935207-1935226 | Msa0096240:intron | 35.0% | |
| TGTCATGATTAGGTACAAAG+GGG | - | chr1_3:1935208-1935227 | Msa0096240:intron | 35.0% | |
| GAGCATGTTCACATATGAAA+AGG | - | chr1_3:1935264-1935283 | Msa0096240:CDS | 35.0% | |
| AGTTCACATTATGTGTGTCT+TGG | - | chr1_3:1935388-1935407 | Msa0096240:CDS | 35.0% | |
| CAGCAATAGAAACCCTAAGA+AGG | - | chr1_3:1923012-1923031 | Msa0096240:intron | 40.0% | |
| ATACCAACCCTTCCTTCTTA+GGG | + | chr1_3:1923027-1923046 | None:intergenic | 40.0% | |
| AATACCAACCCTTCCTTCTT+AGG | + | chr1_3:1923028-1923047 | None:intergenic | 40.0% | |
| !! | AAGAAGGAAGGGTTGGTATT+TGG | - | chr1_3:1923028-1923047 | Msa0096240:intron | 40.0% |
| GGAAGAAACCGATGATCTAA+AGG | - | chr1_3:1923049-1923068 | Msa0096240:intron | 40.0% | |
| ! | ATTGAGAAGTTCCGATTCGA+CGG | + | chr1_3:1923129-1923148 | None:intergenic | 40.0% |
| AATTCCGACCTCAAATCCAT+CGG | - | chr1_3:1923146-1923165 | Msa0096240:CDS | 40.0% | |
| !! | TGAAGAGTGTCCTTCAAAGT+CGG | - | chr1_3:1923324-1923343 | Msa0096240:intron | 40.0% |
| !! | ACTTCTAAGACTGTGTCTCA+CGG | - | chr1_3:1923505-1923524 | Msa0096240:CDS | 40.0% |
| TTACCTGACAATGTTGTTCC+TGG | - | chr1_3:1923575-1923594 | Msa0096240:intron | 40.0% | |
| CAATGTTGTTCCTGGTACTA+AGG | - | chr1_3:1923583-1923602 | Msa0096240:intron | 40.0% | |
| TGACACATTACCTTAGTACC+AGG | + | chr1_3:1923596-1923615 | None:intergenic | 40.0% | |
| ACCCCCCACAATTTCAAAAA+TGG | + | chr1_3:1923797-1923816 | None:intergenic | 40.0% | |
| CCTCAGAATCCTTTATACTG+TGG | + | chr1_3:1923930-1923949 | None:intergenic | 40.0% | |
| CCACAGTATAAAGGATTCTG+AGG | - | chr1_3:1923927-1923946 | Msa0096240:intron | 40.0% | |
| ! | GCAGTTAAAGCATTTGACTG+TGG | + | chr1_3:1923973-1923992 | None:intergenic | 40.0% |
| TTTAAGCACAACTGCAACTG+CGG | - | chr1_3:1924022-1924041 | Msa0096240:intron | 40.0% | |
| TTGCATTGGACAGATTCGTT+TGG | - | chr1_3:1924334-1924353 | Msa0096240:intron | 40.0% | |
| CAAGCTATACCACTATGAAC+TGG | + | chr1_3:1924371-1924390 | None:intergenic | 40.0% | |
| GTCATCTATAAGGAAGCTAG+AGG | - | chr1_3:1924484-1924503 | Msa0096240:intron | 40.0% | |
| CAAAAGCAGTGCATACACTA+GGG | + | chr1_3:1924612-1924631 | None:intergenic | 40.0% | |
| !! | CTCGGTGGGTTATAATACTT+GGG | + | chr1_3:1925229-1925248 | None:intergenic | 40.0% |
| !! | ACTCGGTGGGTTATAATACT+TGG | + | chr1_3:1925230-1925249 | None:intergenic | 40.0% |
| TAATCAAGGTTGTTAAGCGC+GGG | + | chr1_3:1925506-1925525 | None:intergenic | 40.0% | |
| CTAATCAAGGTTGTTAAGCG+CGG | + | chr1_3:1925507-1925526 | None:intergenic | 40.0% | |
| CAACTATGCACTCCTAATCA+AGG | + | chr1_3:1925520-1925539 | None:intergenic | 40.0% | |
| !! | ATGACAGGTTTTATGGGAAG+GGG | - | chr1_3:1925744-1925763 | Msa0096240:intron | 40.0% |
| AGTAGTGCAAATACATCTCC+AGG | + | chr1_3:1925844-1925863 | None:intergenic | 40.0% | |
| ! | GCACTACTTTGCTATGTCAT+AGG | - | chr1_3:1925856-1925875 | Msa0096240:intron | 40.0% |
| !!! | GTCATAGGTGTTTTAGTGAG+AGG | - | chr1_3:1925871-1925890 | Msa0096240:intron | 40.0% |
| ATGTAGTACAGGGAATAGTC+TGG | - | chr1_3:1926118-1926137 | Msa0096240:intron | 40.0% | |
| ! | ACATCGACTAGACTTTGAAC+TGG | + | chr1_3:1926176-1926195 | None:intergenic | 40.0% |
| ATTGCAGTGGCTAAGATTGT+GGG | + | chr1_3:1926224-1926243 | None:intergenic | 40.0% | |
| AATTGCAGTGGCTAAGATTG+TGG | + | chr1_3:1926225-1926244 | None:intergenic | 40.0% | |
| CAATCTTAGCCACTGCAATT+TGG | - | chr1_3:1926225-1926244 | Msa0096240:intron | 40.0% | |
| AGAAGAAATAGTGGTACTGC+TGG | + | chr1_3:1926271-1926290 | None:intergenic | 40.0% | |
| ACTTTGTGTGGTCAAACCTA+CGG | - | chr1_3:1926355-1926374 | Msa0096240:intron | 40.0% | |
| ! | AATTTTGTGCATCTGTGGGT+GGG | + | chr1_3:1926382-1926401 | None:intergenic | 40.0% |
| ! | TAATTTTGTGCATCTGTGGG+TGG | + | chr1_3:1926383-1926402 | None:intergenic | 40.0% |
| TGGAAAGAATGTCTTGGAGA+AGG | - | chr1_3:1926469-1926488 | Msa0096240:intron | 40.0% | |
| CGTGAATCTATACCGTCAAT+TGG | + | chr1_3:1926510-1926529 | None:intergenic | 40.0% | |
| ATTGACGGTATAGATTCACG+GGG | - | chr1_3:1926510-1926529 | Msa0096240:intron | 40.0% | |
| TCACGGGGTTAATACTTGTT+AGG | - | chr1_3:1926525-1926544 | Msa0096240:intron | 40.0% | |
| AGCTCCAACACAACTTAAAG+AGG | + | chr1_3:1926756-1926775 | None:intergenic | 40.0% | |
| ! | ACTGTTGGTTGATTGGAGTT+TGG | - | chr1_3:1926887-1926906 | Msa0096240:intron | 40.0% |
| TGGGAACGTACTAAAACGAT+GGG | + | chr1_3:1926937-1926956 | None:intergenic | 40.0% | |
| TTGGGAACGTACTAAAACGA+TGG | + | chr1_3:1926938-1926957 | None:intergenic | 40.0% | |
| TCAACCAAGGAAGAGTCTTT+GGG | + | chr1_3:1926956-1926975 | None:intergenic | 40.0% | |
| TTCAACCAAGGAAGAGTCTT+TGG | + | chr1_3:1926957-1926976 | None:intergenic | 40.0% | |
| ! | GAAAGCTCTAGCGATAATAG+GGG | + | chr1_3:1927018-1927037 | None:intergenic | 40.0% |
| ! | GGAAAGCTCTAGCGATAATA+GGG | + | chr1_3:1927019-1927038 | None:intergenic | 40.0% |
| ! | TGGAAAGCTCTAGCGATAAT+AGG | + | chr1_3:1927020-1927039 | None:intergenic | 40.0% |
| ! | TTCATTGTCGTTTGAGGTTG+TGG | - | chr1_3:1927107-1927126 | Msa0096240:intron | 40.0% |
| TCCCAACATAATGGCAGTTT+CGG | - | chr1_3:1927209-1927228 | Msa0096240:intron | 40.0% | |
| ACCGAAACTGCCATTATGTT+GGG | + | chr1_3:1927213-1927232 | None:intergenic | 40.0% | |
| AAACAATACTGTTAGAGGCG+GGG | + | chr1_3:1927288-1927307 | None:intergenic | 40.0% | |
| TGGTCTGATCGAACAGATAA+GGG | + | chr1_3:1927407-1927426 | None:intergenic | 40.0% | |
| TTGGTCTGATCGAACAGATA+AGG | + | chr1_3:1927408-1927427 | None:intergenic | 40.0% | |
| TCTGTTCGATCAGACCAATT+TGG | - | chr1_3:1927410-1927429 | Msa0096240:intron | 40.0% | |
| TGTTCGATTACAGGATCCTT+TGG | + | chr1_3:1927442-1927461 | None:intergenic | 40.0% | |
| CGGGCACTAAGTTTATGTTA+GGG | + | chr1_3:1927619-1927638 | None:intergenic | 40.0% | |
| ACGGGCACTAAGTTTATGTT+AGG | + | chr1_3:1927620-1927639 | None:intergenic | 40.0% | |
| ACATAAACTTAGTGCCCGTT+TGG | - | chr1_3:1927621-1927640 | Msa0096240:intron | 40.0% | |
| TCTCCTTGAACAACGTGTAT+AGG | + | chr1_3:1927913-1927932 | None:intergenic | 40.0% | |
| AGCTAGGATTTGTAGCTTCA+TGG | - | chr1_3:1927954-1927973 | Msa0096240:intron | 40.0% | |
| CTAGCCAAAAACAACGTGTT+TGG | + | chr1_3:1928022-1928041 | None:intergenic | 40.0% | |
| ! | AGTATGACGGAAGTTTGGTT+TGG | + | chr1_3:1928100-1928119 | None:intergenic | 40.0% |
| ! | TGAAGAGTATGACGGAAGTT+TGG | + | chr1_3:1928105-1928124 | None:intergenic | 40.0% |
| ! | TTCAGGAGTGAAGAGTATGA+CGG | + | chr1_3:1928113-1928132 | None:intergenic | 40.0% |
| GAAAAGGAGTTGGAGATCAT+GGG | + | chr1_3:1928247-1928266 | None:intergenic | 40.0% | |
| TGAAAAGGAGTTGGAGATCA+TGG | + | chr1_3:1928248-1928267 | None:intergenic | 40.0% | |
| TGATCGAAGTGAAAAGGAGT+TGG | + | chr1_3:1928257-1928276 | None:intergenic | 40.0% | |
| ! | TAGGGTTGATCGAAGTGAAA+AGG | + | chr1_3:1928263-1928282 | None:intergenic | 40.0% |
| TAGAATGTTCTCTTTAGGCG+GGG | + | chr1_3:1928299-1928318 | None:intergenic | 40.0% | |
| TGGTAGCATCCAATATGAGA+TGG | + | chr1_3:1928421-1928440 | None:intergenic | 40.0% | |
| TGACTTGACTAGAGACTACA+TGG | - | chr1_3:1928451-1928470 | Msa0096240:intron | 40.0% | |
| GACTTGACTAGAGACTACAT+GGG | - | chr1_3:1928452-1928471 | Msa0096240:intron | 40.0% | |
| !! | AGGTGAAGGAGTGCTAAATA+TGG | + | chr1_3:1928675-1928694 | None:intergenic | 40.0% |
| TTCCTACATAACCAGTGTTG+AGG | + | chr1_3:1928763-1928782 | None:intergenic | 40.0% | |
| AAAGAAAAAACGGGAGCTTG+AGG | - | chr1_3:1928873-1928892 | Msa0096240:intron | 40.0% | |
| TGGTATAGTGACCTTCTTTG+AGG | + | chr1_3:1928917-1928936 | None:intergenic | 40.0% | |
| ! | GCCAAAAATTGGGGTTTGTT+TGG | + | chr1_3:1928937-1928956 | None:intergenic | 40.0% |
| TGGCAGAAAAAATCCACTGT+AGG | + | chr1_3:1929264-1929283 | None:intergenic | 40.0% | |
| CACGCAATTTCAGCCAATAA+TGG | - | chr1_3:1929306-1929325 | Msa0096240:intron | 40.0% | |
| TCGAACTTAACCAACAAGAC+TGG | - | chr1_3:1929619-1929638 | Msa0096240:intron | 40.0% | |
| CAGGAACGACAAAATGTTTG+TGG | - | chr1_3:1929726-1929745 | Msa0096240:intron | 40.0% | |
| !! | CAAAATGTTTGTGGTGTCAC+AGG | - | chr1_3:1929735-1929754 | Msa0096240:intron | 40.0% |
| TGGTCAGGCTTAATCCATAT+TGG | + | chr1_3:1929767-1929786 | None:intergenic | 40.0% | |
| GATTAAGCCTGACCAGTTAA+AGG | - | chr1_3:1929772-1929791 | Msa0096240:intron | 40.0% | |
| TTGATCCTACTAAAAGGCCA+AGG | - | chr1_3:1929840-1929859 | Msa0096240:intron | 40.0% | |
| CTTATGAAATAGCCTAGCCT+TGG | + | chr1_3:1929860-1929879 | None:intergenic | 40.0% | |
| ! | CAAGGCTAGGCTATTTCATA+AGG | - | chr1_3:1929858-1929877 | Msa0096240:intron | 40.0% |
| ! | AGGCTAGGCTATTTCATAAG+GGG | - | chr1_3:1929860-1929879 | Msa0096240:intron | 40.0% |
| AAGGGGGAATAGTGATGATT+CGG | - | chr1_3:1929877-1929896 | Msa0096240:intron | 40.0% | |
| CTGTCCATAAATCAAACGCA+TGG | - | chr1_3:1930002-1930021 | Msa0096240:intron | 40.0% | |
| CATAAATCAAACGCATGGAC+CGG | - | chr1_3:1930007-1930026 | Msa0096240:intron | 40.0% | |
| ACAATTAATCTTCTACCCGG+AGG | + | chr1_3:1930189-1930208 | None:intergenic | 40.0% | |
| !! | AGTTTGTTTTCAGCTCGTTC+TGG | + | chr1_3:1930400-1930419 | None:intergenic | 40.0% |
| ! | CAGACAAAGCTATCACCTTT+TGG | + | chr1_3:1930442-1930461 | None:intergenic | 40.0% |
| ATCATATAAAAAGGGCAGCC+CGG | + | chr1_3:1930527-1930546 | None:intergenic | 40.0% | |
| TTCCTTAAATGCACCTCAGA+GGG | + | chr1_3:1930561-1930580 | None:intergenic | 40.0% | |
| TTCAGCTCTTTCTGGACAAA+AGG | + | chr1_3:1930630-1930649 | None:intergenic | 40.0% | |
| TGAAGACAAGCCTAGTAGTT+CGG | - | chr1_3:1930646-1930665 | Msa0096240:intron | 40.0% | |
| ! | GCAAAGGAATCACCTTCTTT+TGG | + | chr1_3:1930680-1930699 | None:intergenic | 40.0% |
| AGCAGAAGAATAACAGGCAA+AGG | + | chr1_3:1930696-1930715 | None:intergenic | 40.0% | |
| !!! | ACCGTTTGGTTTGAGAGTTT+TGG | - | chr1_3:1930906-1930925 | Msa0096240:intron | 40.0% |
| !!! | GTTTGGTTTGAGAGTTTTGG+AGG | - | chr1_3:1930909-1930928 | Msa0096240:intron | 40.0% |
| !!! | TTGGTTTGAGAGTTTTGGAG+GGG | - | chr1_3:1930911-1930930 | Msa0096240:intron | 40.0% |
| !! | AATTTTTAGAAGGGGATGGG+AGG | - | chr1_3:1930971-1930990 | Msa0096240:intron | 40.0% |
| !! | ATTTTTAGAAGGGGATGGGA+GGG | - | chr1_3:1930972-1930991 | Msa0096240:intron | 40.0% |
| CGATGTAGACGTTGGAATAA+TGG | + | chr1_3:1931277-1931296 | None:intergenic | 40.0% | |
| TAACAACACGATGTAGACGT+TGG | + | chr1_3:1931285-1931304 | None:intergenic | 40.0% | |
| ! | AAGTGTGTTTGGTTCACAAG+GGG | + | chr1_3:1931401-1931420 | None:intergenic | 40.0% |
| ! | GAAGTGTGTTTGGTTCACAA+GGG | + | chr1_3:1931402-1931421 | None:intergenic | 40.0% |
| ! | AGAAGTGTGTTTGGTTCACA+AGG | + | chr1_3:1931403-1931422 | None:intergenic | 40.0% |
| !! | AGAAATTTTAACGGAGGGGA+GGG | + | chr1_3:1931440-1931459 | None:intergenic | 40.0% |
| !! | AGGGGAGAAATTTTAACGGA+GGG | + | chr1_3:1931445-1931464 | None:intergenic | 40.0% |
| ! | TTTGGTTCGAGAATTAGGAG+GGG | + | chr1_3:1931473-1931492 | None:intergenic | 40.0% |
| ! | GTTTGGTTCGAGAATTAGGA+GGG | + | chr1_3:1931474-1931493 | None:intergenic | 40.0% |
| CTCCTAATTCTCGAACCAAA+CGG | - | chr1_3:1931473-1931492 | Msa0096240:intron | 40.0% | |
| !! | TAACTTGTTGTCCCCTCTTA+GGG | + | chr1_3:1928517-1928536 | None:intergenic | 40.0% |
| ! | TGCTTTTGCTTGTATCCCTA+GGG | - | chr1_3:1931603-1931622 | Msa0096240:intron | 40.0% |
| !! | AGGTGAAGGAGTGCTAAATA+TGG | + | chr1_3:1928675-1928694 | None:intergenic | 40.0% |
| ACCTCCATTAACCCAACTAT+TGG | - | chr1_3:1928691-1928710 | Msa0096240:intron | 40.0% | |
| TCCAATAGTTGGGTTAATGG+AGG | + | chr1_3:1931678-1931697 | None:intergenic | 40.0% | |
| TTCCTACATAACCAGTGTTG+AGG | + | chr1_3:1928763-1928782 | None:intergenic | 40.0% | |
| TGGTATAGTGACCTTCTTTG+AGG | + | chr1_3:1928917-1928936 | None:intergenic | 40.0% | |
| ! | GCCAAAAATTGGGGTTTGTT+TGG | + | chr1_3:1928937-1928956 | None:intergenic | 40.0% |
| TTATGTTGGGTACCACCAAA+AGG | - | chr1_3:1931995-1932014 | Msa0096240:intron | 40.0% | |
| TGGCAGAAAAAATCCACTGT+AGG | + | chr1_3:1929264-1929283 | None:intergenic | 40.0% | |
| CACGCAATTTCAGCCAATAA+TGG | - | chr1_3:1929306-1929325 | Msa0096240:intron | 40.0% | |
| TTAGACTGTCTAAATTGGCC+AGG | + | chr1_3:1932349-1932368 | None:intergenic | 40.0% | |
| TGGCCAATTTAGACAGTCTA+AGG | - | chr1_3:1932348-1932367 | Msa0096240:intron | 40.0% | |
| CTGCCTTAGACTGTCTAAAT+TGG | + | chr1_3:1932354-1932373 | None:intergenic | 40.0% | |
| ! | TTTAGACAGTCTAAGGCAGT+TGG | - | chr1_3:1932355-1932374 | Msa0096240:intron | 40.0% |
| !! | GATGCTTTTAGGAAAGGAGT+AGG | - | chr1_3:1932550-1932569 | Msa0096240:intron | 40.0% |
| TCGAACTTAACCAACAAGAC+TGG | - | chr1_3:1929619-1929638 | Msa0096240:intron | 40.0% | |
| CAGGAACGACAAAATGTTTG+TGG | - | chr1_3:1929726-1929745 | Msa0096240:intron | 40.0% | |
| !! | CAAAATGTTTGTGGTGTCAC+AGG | - | chr1_3:1929735-1929754 | Msa0096240:intron | 40.0% |
| TGGTCAGGCTTAATCCATAT+TGG | + | chr1_3:1929767-1929786 | None:intergenic | 40.0% | |
| GATTAAGCCTGACCAGTTAA+AGG | - | chr1_3:1929772-1929791 | Msa0096240:intron | 40.0% | |
| TTGATCCTACTAAAAGGCCA+AGG | - | chr1_3:1929840-1929859 | Msa0096240:intron | 40.0% | |
| CTTATGAAATAGCCTAGCCT+TGG | + | chr1_3:1929860-1929879 | None:intergenic | 40.0% | |
| ! | CAAGGCTAGGCTATTTCATA+AGG | - | chr1_3:1929858-1929877 | Msa0096240:intron | 40.0% |
| CTGTCCATAAATCAAACGCA+TGG | - | chr1_3:1930002-1930021 | Msa0096240:intron | 40.0% | |
| CATAAATCAAACGCATGGAC+CGG | - | chr1_3:1930007-1930026 | Msa0096240:intron | 40.0% | |
| ATATCCAGCAAGACCGAAAT+CGG | - | chr1_3:1933688-1933707 | Msa0096240:intron | 40.0% | |
| !! | AGTTTGTTTTCAGCTCGTTC+CGG | + | chr1_3:1930400-1930419 | None:intergenic | 40.0% |
| ! | CAGACAAAGCTATCACCTTT+TGG | + | chr1_3:1930442-1930461 | None:intergenic | 40.0% |
| TTCCTTAAATGCACCTCAGA+GGG | + | chr1_3:1930561-1930580 | None:intergenic | 40.0% | |
| TTCAGCTCTTTCTGGACAAA+AGG | + | chr1_3:1930630-1930649 | None:intergenic | 40.0% | |
| TGAAGACAAGCCTAGTAGTT+CGG | - | chr1_3:1930646-1930665 | Msa0096240:intron | 40.0% | |
| ! | GCAAAGGAATCACCTTCTTT+TGG | + | chr1_3:1930680-1930699 | None:intergenic | 40.0% |
| AGCAGAAGAATAACAGGCAA+AGG | + | chr1_3:1930696-1930715 | None:intergenic | 40.0% | |
| TGGGTAAACCAAAAATACGG+GGG | - | chr1_3:1934292-1934311 | Msa0096240:intron | 40.0% | |
| !! | AATGGATTGTGCTCCTTGTT+TGG | - | chr1_3:1934367-1934386 | Msa0096240:intron | 40.0% |
| ! | GTGCTCCTTGTTTGGATATA+CGG | - | chr1_3:1934375-1934394 | Msa0096240:intron | 40.0% |
| TTGCTCCGTATATCCAAACA+AGG | + | chr1_3:1934383-1934402 | None:intergenic | 40.0% | |
| GAACATAGTGAATCGAACAC+AGG | + | chr1_3:1934584-1934603 | None:intergenic | 40.0% | |
| GTTCGATTCACTATGTTCGT+TGG | - | chr1_3:1934586-1934605 | Msa0096240:intron | 40.0% | |
| GCAGCGAATTTCACTTAACT+GGG | + | chr1_3:1934695-1934714 | None:intergenic | 40.0% | |
| TGCAGCGAATTTCACTTAAC+TGG | + | chr1_3:1934696-1934715 | None:intergenic | 40.0% | |
| GTTAAGTGAAATTCGCTGCA+TGG | - | chr1_3:1934696-1934715 | Msa0096240:intron | 40.0% | |
| TCTAGATATTAGCCGTGATG+AGG | - | chr1_3:1935036-1935055 | Msa0096240:intron | 40.0% | |
| GATAGCTATCAAATGGGAAG+AGG | - | chr1_3:1935295-1935314 | Msa0096240:CDS | 40.0% | |
| AAACCCTAAGAAGGAAGGGT+TGG | - | chr1_3:1923021-1923040 | Msa0096240:intron | 45.0% | |
| AAACACCTTGGAAGGGTCAT+CGG | + | chr1_3:1923102-1923121 | None:intergenic | 45.0% | |
| ! | AAGAAGAGATGGTTCGGGTA+AGG | + | chr1_3:1923180-1923199 | None:intergenic | 45.0% |
| GTACGAAGAAGAGATGGTTC+GGG | + | chr1_3:1923185-1923204 | None:intergenic | 45.0% | |
| GGTACGAAGAAGAGATGGTT+CGG | + | chr1_3:1923186-1923205 | None:intergenic | 45.0% | |
| GAAGTGGTACGAAGAAGAGA+TGG | + | chr1_3:1923191-1923210 | None:intergenic | 45.0% | |
| CGTACCACTTCTTATCTCCA+TGG | - | chr1_3:1923200-1923219 | Msa0096240:CDS | 45.0% | |
| GGACATATCTATGAGCAGTG+TGG | - | chr1_3:1923451-1923470 | Msa0096240:CDS | 45.0% | |
| GTACCAGGAACAACATTGTC+AGG | + | chr1_3:1923581-1923600 | None:intergenic | 45.0% | |
| TCATAGACTTGCAGCCATGA+AGG | + | chr1_3:1923820-1923839 | None:intergenic | 45.0% | |
| GTGCTCTGCAACTGTTATTG+TGG | - | chr1_3:1923904-1923923 | Msa0096240:intron | 45.0% | |
| AAGCTAGAGGATCGTGATTC+AGG | - | chr1_3:1924497-1924516 | Msa0096240:intron | 45.0% | |
| GCAAAAGCAGTGCATACACT+AGG | + | chr1_3:1924613-1924632 | None:intergenic | 45.0% | |
| ! | AGGAGCATGGTTGTCAAACT+CGG | - | chr1_3:1924698-1924717 | Msa0096240:CDS | 45.0% |
| ATACTCGAACGATCTTCGGT+GGG | + | chr1_3:1924727-1924746 | None:intergenic | 45.0% | |
| TATACTCGAACGATCTTCGG+TGG | + | chr1_3:1924728-1924747 | None:intergenic | 45.0% | |
| GATTCACTGAACTTGGGACT+CGG | + | chr1_3:1925247-1925266 | None:intergenic | 45.0% | |
| !! | GTTTGACCTGTTTCTGAACC+GGG | + | chr1_3:1925322-1925341 | None:intergenic | 45.0% |
| !! | CGTTTGACCTGTTTCTGAAC+CGG | + | chr1_3:1925323-1925342 | None:intergenic | 45.0% |
| CGGTTCAGAAACAGGTCAAA+CGG | - | chr1_3:1925321-1925340 | Msa0096240:intron | 45.0% | |
| AAACAGGTCAAACGGTCAAG+TGG | - | chr1_3:1925329-1925348 | Msa0096240:intron | 45.0% | |
| AACAGGTCAAACGGTCAAGT+GGG | - | chr1_3:1925330-1925349 | Msa0096240:intron | 45.0% | |
| AAACGGTCAAGTGGGTGAAA+CGG | - | chr1_3:1925338-1925357 | Msa0096240:intron | 45.0% | |
| CGCGCTTAACAACCTTGATT+AGG | - | chr1_3:1925505-1925524 | Msa0096240:intron | 45.0% | |
| AGTGAGTCTTGGGTAATGAC+AGG | - | chr1_3:1925729-1925748 | Msa0096240:intron | 45.0% | |
| ! | GTTTTATGGGAAGGGGACTA+AGG | - | chr1_3:1925751-1925770 | Msa0096240:intron | 45.0% |
| ! | GAGACCCCATCTTTGTTTCT+TGG | + | chr1_3:1925968-1925987 | None:intergenic | 45.0% |
| GTCTGGCCTCGTAATACAAA+AGG | - | chr1_3:1926135-1926154 | Msa0096240:intron | 45.0% | |
| TAGACTTTGAACTGGCTAGC+AGG | + | chr1_3:1926168-1926187 | None:intergenic | 45.0% | |
| TTGCAGTGGCTAAGATTGTG+GGG | + | chr1_3:1926223-1926242 | None:intergenic | 45.0% | |
| AGAGGGTGAAGGATTATCTG+AGG | - | chr1_3:1926427-1926446 | Msa0096240:intron | 45.0% | |
| GATGGGTGGAAAGAATGTCT+TGG | - | chr1_3:1926463-1926482 | Msa0096240:intron | 45.0% | |
| TCATTAGCAAGTGGCCCATT+AGG | - | chr1_3:1926606-1926625 | Msa0096240:intron | 45.0% | |
| CATTAGCAAGTGGCCCATTA+GGG | - | chr1_3:1926607-1926626 | Msa0096240:intron | 45.0% | |
| TTGTGTTGGAGCTTTGCTCT+GGG | - | chr1_3:1926763-1926782 | Msa0096240:intron | 45.0% | |
| !!! | TGCTTTTTCGGGGTTACTGT+TGG | - | chr1_3:1926872-1926891 | Msa0096240:intron | 45.0% |
| TCTTCCTTGGTTGAAACCCA+AGG | - | chr1_3:1926962-1926981 | Msa0096240:intron | 45.0% | |
| TTACAGGGTTCACATGCCTT+GGG | + | chr1_3:1926981-1927000 | None:intergenic | 45.0% | |
| ! | AGCCGATCGAATACCTTTTG+TGG | + | chr1_3:1927054-1927073 | None:intergenic | 45.0% |
| CACCGAAACTGCCATTATGT+TGG | + | chr1_3:1927214-1927233 | None:intergenic | 45.0% | |
| CAACATAATGGCAGTTTCGG+TGG | - | chr1_3:1927212-1927231 | Msa0096240:intron | 45.0% | |
| CAGAGAGCCATAAATAGCTC+AGG | + | chr1_3:1927261-1927280 | None:intergenic | 45.0% | |
| GAAGGTGGATGTAGTTAAGG+CGG | + | chr1_3:1927383-1927402 | None:intergenic | 45.0% | |
| GGAGAAGGTGGATGTAGTTA+AGG | + | chr1_3:1927386-1927405 | None:intergenic | 45.0% | |
| GATCGAACAGATAAGGGAGA+AGG | + | chr1_3:1927401-1927420 | None:intergenic | 45.0% | |
| !! | GATTCATCTCTGAGGTGTGT+CGG | + | chr1_3:1927587-1927606 | None:intergenic | 45.0% |
| GAGAGTAGGATTCATCTCTG+AGG | + | chr1_3:1927595-1927614 | None:intergenic | 45.0% | |
| GTTTATGTTAGGGCGAGAGT+AGG | + | chr1_3:1927609-1927628 | None:intergenic | 45.0% | |
| AGAATTGAAGTTGGCCGAGA+AGG | - | chr1_3:1928595-1928614 | Msa0096240:intron | 45.0% | |
| GAATTGAAGTTGGCCGAGAA+GGG | - | chr1_3:1928596-1928615 | Msa0096240:intron | 45.0% | |
| AATTGAAGTTGGCCGAGAAG+GGG | - | chr1_3:1928597-1928616 | Msa0096240:intron | 45.0% | |
| ! | GTGCTTTTGCTTGTATCCCT+GGG | - | chr1_3:1928619-1928638 | Msa0096240:intron | 45.0% |
| ! | TGCTTTTGCTTGTATCCCTG+GGG | - | chr1_3:1928620-1928639 | Msa0096240:intron | 45.0% |
| AGTTGGGTTAATGGAGGTGA+AGG | + | chr1_3:1928689-1928708 | None:intergenic | 45.0% | |
| ! | CTACATAACCAGTGTTGAGG+TGG | + | chr1_3:1928760-1928779 | None:intergenic | 45.0% |
| ! | CACCTCAACACTGGTTATGT+AGG | - | chr1_3:1928758-1928777 | Msa0096240:intron | 45.0% |
| TGATTAGAGGGCCTCAAAGA+AGG | - | chr1_3:1928903-1928922 | Msa0096240:intron | 45.0% | |
| ! | TTATGTTGGGTACCGCCAAA+AGG | - | chr1_3:1929014-1929033 | Msa0096240:intron | 45.0% |
| GTATCAGATGTGGGCATGAT+CGG | + | chr1_3:1929067-1929086 | None:intergenic | 45.0% | |
| CAGTATCAGATGTCCTACAG+TGG | - | chr1_3:1929248-1929267 | Msa0096240:intron | 45.0% | |
| AAGGATGCACTTCTTCCGAT+TGG | + | chr1_3:1929284-1929303 | None:intergenic | 45.0% | |
| TTGGCTGAAATTGCGTGCAA+AGG | + | chr1_3:1929303-1929322 | None:intergenic | 45.0% | |
| ! | GTAAGAGAAGTGTGATGACC+TGG | - | chr1_3:1929347-1929366 | Msa0096240:intron | 45.0% |
| !! | GTAAGACAAGGGCATTTCAG+TGG | - | chr1_3:1929434-1929453 | Msa0096240:intron | 45.0% |
| !! | AAGGGCATTTCAGTGGAACA+AGG | - | chr1_3:1929441-1929460 | Msa0096240:intron | 45.0% |
| !! | TAACCAACAAGACTGGCTTC+AGG | - | chr1_3:1929626-1929645 | Msa0096240:intron | 45.0% |
| ! | ATACCTGAAGCCAGTCTTGT+TGG | + | chr1_3:1929632-1929651 | None:intergenic | 45.0% |
| CATGTCCTGCAGCTAGAATA+AGG | - | chr1_3:1929702-1929721 | Msa0096240:intron | 45.0% | |
| ACCTCATCCTTTAACTGGTC+AGG | + | chr1_3:1929782-1929801 | None:intergenic | 45.0% | |
| CCAACACCTCATCCTTTAAC+TGG | + | chr1_3:1929787-1929806 | None:intergenic | 45.0% | |
| CCAGTTAAAGGATGAGGTGT+TGG | - | chr1_3:1929784-1929803 | Msa0096240:intron | 45.0% | |
| ! | GGCTAGGCTATTTCATAAGG+GGG | - | chr1_3:1929861-1929880 | Msa0096240:intron | 45.0% |
| ATGGACAGCATCATTACCAG+CGG | + | chr1_3:1929990-1930009 | None:intergenic | 45.0% | |
| ! | CGGTCCATGCGTTTGATTTA+TGG | + | chr1_3:1930009-1930028 | None:intergenic | 45.0% |
| !!! | GCTCACTCTCTTTAGGGTTT+TGG | - | chr1_3:1930073-1930092 | Msa0096240:intron | 45.0% |
| ATAAGTCCTCTGCCATAGCA+GGG | + | chr1_3:1930116-1930135 | None:intergenic | 45.0% | |
| AATAAGTCCTCTGCCATAGC+AGG | + | chr1_3:1930117-1930136 | None:intergenic | 45.0% | |
| GCTCTAATAGCTCCAGCAAT+GGG | + | chr1_3:1930295-1930314 | None:intergenic | 45.0% | |
| ! | AGCTCTAATAGCTCCAGCAA+TGG | + | chr1_3:1930296-1930315 | None:intergenic | 45.0% |
| GAGCTATTAGAGCTGAGATG+AGG | - | chr1_3:1930302-1930321 | Msa0096240:intron | 45.0% | |
| ATATCCAGCAGGACCGAAAT+CGG | - | chr1_3:1930332-1930351 | Msa0096240:intron | 45.0% | |
| !! | TTTCAGCTCGTTCTGGAAGT+GGG | + | chr1_3:1930393-1930412 | None:intergenic | 45.0% |
| !!! | TTTTCAGCTCGTTCTGGAAG+TGG | + | chr1_3:1930394-1930413 | None:intergenic | 45.0% |
| AGTTCAGGGTTAAGGCCAAA+AGG | - | chr1_3:1930424-1930443 | Msa0096240:intron | 45.0% | |
| ATTAGGGATGTAACCCTCTG+AGG | - | chr1_3:1930545-1930564 | Msa0096240:intron | 45.0% | |
| !! | AACCCTCTGAGGTGCATTTA+AGG | - | chr1_3:1930556-1930575 | Msa0096240:intron | 45.0% |
| CTTCCTTAAATGCACCTCAG+AGG | + | chr1_3:1930562-1930581 | None:intergenic | 45.0% | |
| GAAGACAAGCCTAGTAGTTC+GGG | - | chr1_3:1930647-1930666 | Msa0096240:intron | 45.0% | |
| AAGACAAGCCTAGTAGTTCG+GGG | - | chr1_3:1930648-1930667 | Msa0096240:intron | 45.0% | |
| !!! | TTTGAGAGTTTTGGAGGGGA+GGG | - | chr1_3:1930915-1930934 | Msa0096240:intron | 45.0% |
| !! | TTTTTAGAAGGGGATGGGAG+GGG | - | chr1_3:1930973-1930992 | Msa0096240:intron | 45.0% |
| !! | GAAATTTTAACGGAGGGGAG+GGG | + | chr1_3:1931439-1931458 | None:intergenic | 45.0% |
| !! | GAGAAATTTTAACGGAGGGG+AGG | + | chr1_3:1931441-1931460 | None:intergenic | 45.0% |
| !! | GGGGAGAAATTTTAACGGAG+GGG | + | chr1_3:1931444-1931463 | None:intergenic | 45.0% |
| !! | GAGGGGAGAAATTTTAACGG+AGG | + | chr1_3:1931446-1931465 | None:intergenic | 45.0% |
| ! | GGGGAGGGGAGAAATTTTAA+CGG | + | chr1_3:1931449-1931468 | None:intergenic | 45.0% |
| ! | CGTTTGGTTCGAGAATTAGG+AGG | + | chr1_3:1931475-1931494 | None:intergenic | 45.0% |
| ! | GTCCGTTTGGTTCGAGAATT+AGG | + | chr1_3:1931478-1931497 | None:intergenic | 45.0% |
| !! | GTAACTTGTTGTCCCCTCTT+AGG | + | chr1_3:1928518-1928537 | None:intergenic | 45.0% |
| AGAATTGAAGTTGGCCGAGA+AGG | - | chr1_3:1928595-1928614 | Msa0096240:intron | 45.0% | |
| GAATTGAAGTTGGCCGAGAA+GGG | - | chr1_3:1928596-1928615 | Msa0096240:intron | 45.0% | |
| AATTGAAGTTGGCCGAGAAG+GGG | - | chr1_3:1928597-1928616 | Msa0096240:intron | 45.0% | |
| ! | GTGCTTTTGCTTGTATCCCT+AGG | - | chr1_3:1928619-1928638 | Msa0096240:intron | 45.0% |
| ! | GCTTTTGCTTGTATCCCTAG+GGG | - | chr1_3:1931604-1931623 | Msa0096240:intron | 45.0% |
| AGTTGGGTTAATGGAGGTGA+AGG | + | chr1_3:1928689-1928708 | None:intergenic | 45.0% | |
| ! | CTACATAACCAGTGTTGAGG+TGG | + | chr1_3:1928760-1928779 | None:intergenic | 45.0% |
| ! | CACCTCAACACTGGTTATGT+AGG | - | chr1_3:1928758-1928777 | Msa0096240:intron | 45.0% |
| TGATTAGAGGGCCTCAAAGA+AGG | - | chr1_3:1928903-1928922 | Msa0096240:intron | 45.0% | |
| GTATCAGATGTGGGCATGAT+CGG | + | chr1_3:1929067-1929086 | None:intergenic | 45.0% | |
| CAGTATCAGATGTCCTACAG+TGG | - | chr1_3:1929248-1929267 | Msa0096240:intron | 45.0% | |
| AAGGATGCACTTCTTCCGAT+TGG | + | chr1_3:1929284-1929303 | None:intergenic | 45.0% | |
| TTGGCTGAAATTGCGTGCAA+AGG | + | chr1_3:1929303-1929322 | None:intergenic | 45.0% | |
| ! | GTAAGAGAAGTGTGATGACC+TGG | - | chr1_3:1929347-1929366 | Msa0096240:intron | 45.0% |
| !! | GTAAGACAAGGGCATTTCAG+TGG | - | chr1_3:1929434-1929453 | Msa0096240:intron | 45.0% |
| !! | AAGGGCATTTCAGTGGAACA+AGG | - | chr1_3:1929441-1929460 | Msa0096240:intron | 45.0% |
| !! | TAACCAACAAGACTGGCTTC+AGG | - | chr1_3:1929626-1929645 | Msa0096240:intron | 45.0% |
| ! | ATACCTGAAGCCAGTCTTGT+TGG | + | chr1_3:1929632-1929651 | None:intergenic | 45.0% |
| CATGTCCTGCAGCTAGAATA+AGG | - | chr1_3:1929702-1929721 | Msa0096240:intron | 45.0% | |
| ACCTCATCCTTTAACTGGTC+AGG | + | chr1_3:1929782-1929801 | None:intergenic | 45.0% | |
| CCAACACCTCATCCTTTAAC+TGG | + | chr1_3:1929787-1929806 | None:intergenic | 45.0% | |
| CCAGTTAAAGGATGAGGTGT+TGG | - | chr1_3:1929784-1929803 | Msa0096240:intron | 45.0% | |
| ATGGACAGCATCATTACCAG+CGG | + | chr1_3:1929990-1930009 | None:intergenic | 45.0% | |
| ! | CGGTCCATGCGTTTGATTTA+TGG | + | chr1_3:1930009-1930028 | None:intergenic | 45.0% |
| !!! | GCTCACTCTCTTTAGGGTTT+TGG | - | chr1_3:1930073-1930092 | Msa0096240:intron | 45.0% |
| ATAAGTCCTCTGCCATAGCA+GGG | + | chr1_3:1930116-1930135 | None:intergenic | 45.0% | |
| AATAAGTCCTCTGCCATAGC+AGG | + | chr1_3:1930117-1930136 | None:intergenic | 45.0% | |
| GCTCTAATAGCTCCAGCAAT+GGG | + | chr1_3:1930295-1930314 | None:intergenic | 45.0% | |
| ! | AGCTCTAATAGCTCCAGCAA+TGG | + | chr1_3:1930296-1930315 | None:intergenic | 45.0% |
| GAGCTATTAGAGCTGAGATG+AGG | - | chr1_3:1930302-1930321 | Msa0096240:intron | 45.0% | |
| AGTTCAGGGTTAAGGCCAAA+AGG | - | chr1_3:1930424-1930443 | Msa0096240:intron | 45.0% | |
| ATTAGGGATGTAACCCTCTG+AGG | - | chr1_3:1930545-1930564 | Msa0096240:intron | 45.0% | |
| !! | AACCCTCTGAGGTGCATTTA+AGG | - | chr1_3:1930556-1930575 | Msa0096240:intron | 45.0% |
| CTTCCTTAAATGCACCTCAG+AGG | + | chr1_3:1930562-1930581 | None:intergenic | 45.0% | |
| GAAGACAAGCCTAGTAGTTC+GGG | - | chr1_3:1930647-1930666 | Msa0096240:intron | 45.0% | |
| AAGACAAGCCTAGTAGTTCG+GGG | - | chr1_3:1930648-1930667 | Msa0096240:intron | 45.0% | |
| TCATGGGGGATGAACATGAT+GGG | - | chr1_3:1934245-1934264 | Msa0096240:intron | 45.0% | |
| GGGTAAACCAAAAATACGGG+GGG | - | chr1_3:1934293-1934312 | Msa0096240:intron | 45.0% | |
| ! | CCATAAACCCCCCGTATTTT+TGG | + | chr1_3:1934303-1934322 | None:intergenic | 45.0% |
| CCAAAAATACGGGGGGTTTA+TGG | - | chr1_3:1934300-1934319 | Msa0096240:intron | 45.0% | |
| TACAGACCTGAGAATGTTCG+AGG | + | chr1_3:1935093-1935112 | None:intergenic | 45.0% | |
| ATTAGGTACAAAGGGGTCCT+CGG | - | chr1_3:1935215-1935234 | Msa0096240:CDS | 45.0% | |
| AGCTATCAAATGGGAAGAGG+AGG | - | chr1_3:1935298-1935317 | Msa0096240:CDS | 45.0% | |
| !! | AATAATAAGTTATAATAAAA+GGG | + | chr1_3:1924987-1925006 | None:intergenic | 5.0% |
| CGGACTCAAACACCTTGGAA+GGG | + | chr1_3:1923109-1923128 | None:intergenic | 50.0% | |
| ACGGACTCAAACACCTTGGA+AGG | + | chr1_3:1923110-1923129 | None:intergenic | 50.0% | |
| ! | TTCGACGGACTCAAACACCT+TGG | + | chr1_3:1923114-1923133 | None:intergenic | 50.0% |
| GGTGTTTGAGTCCGTCGAAT+CGG | - | chr1_3:1923115-1923134 | Msa0096240:CDS | 50.0% | |
| ! | ACTTGGCTCCGATGGATTTG+AGG | + | chr1_3:1923157-1923176 | None:intergenic | 50.0% |
| ! | AGATGGTTCGGGTAAGGACT+TGG | + | chr1_3:1923174-1923193 | None:intergenic | 50.0% |
| GGGACCATGGAGATAAGAAG+TGG | + | chr1_3:1923207-1923226 | None:intergenic | 50.0% | |
| !! | CCTGAAGAACTTTGGGACCA+TGG | + | chr1_3:1923220-1923239 | None:intergenic | 50.0% |
| CCATGGTCCCAAAGTTCTTC+AGG | - | chr1_3:1923217-1923236 | Msa0096240:intron | 50.0% | |
| CTAAGACTGTGTCTCACGGA+TGG | - | chr1_3:1923509-1923528 | Msa0096240:CDS | 50.0% | |
| TGATGTTGCAGCTGCACTAG+CGG | - | chr1_3:1923764-1923783 | Msa0096240:intron | 50.0% | |
| AAATTGTGGGGGGTCCTTCA+TGG | - | chr1_3:1923803-1923822 | Msa0096240:intron | 50.0% | |
| !! | GGATTCTGAGGTATCCGCAA+CGG | - | chr1_3:1923939-1923958 | Msa0096240:intron | 50.0% |
| CTAGAGGATCGTGATTCAGG+TGG | - | chr1_3:1924500-1924519 | Msa0096240:intron | 50.0% | |
| TGCAGCTTCACAAATGGAGG+AGG | + | chr1_3:1924527-1924546 | None:intergenic | 50.0% | |
| TCCTCCATTTGTGAAGCTGC+AGG | - | chr1_3:1924526-1924545 | Msa0096240:intron | 50.0% | |
| ACCTGCAGCTTCACAAATGG+AGG | + | chr1_3:1924530-1924549 | None:intergenic | 50.0% | |
| CCAACCTGCAGCTTCACAAA+TGG | + | chr1_3:1924533-1924552 | None:intergenic | 50.0% | |
| CCATTTGTGAAGCTGCAGGT+TGG | - | chr1_3:1924530-1924549 | Msa0096240:intron | 50.0% | |
| GGAGCATGGTTGTCAAACTC+GGG | - | chr1_3:1924699-1924718 | Msa0096240:CDS | 50.0% | |
| ATTCACGAACCGCTCTGACA+CGG | - | chr1_3:1925434-1925453 | Msa0096240:intron | 50.0% | |
| TTCAATCCACCGTGTCAGAG+CGG | + | chr1_3:1925446-1925465 | None:intergenic | 50.0% | |
| GAAGGGGACTAAGGTGTAGA+GGG | - | chr1_3:1925760-1925779 | Msa0096240:intron | 50.0% | |
| AAGGGGACTAAGGTGTAGAG+GGG | - | chr1_3:1925761-1925780 | Msa0096240:intron | 50.0% | |
| !! | GATGTCACTCTTTGGTGTCC+TGG | - | chr1_3:1925823-1925842 | Msa0096240:intron | 50.0% |
| GCAAAAGCTTCATTGGGGTG+AGG | - | chr1_3:1926081-1926100 | Msa0096240:intron | 50.0% | |
| !! | TGCAGTAGCGGATGTAGTAC+AGG | - | chr1_3:1926107-1926126 | Msa0096240:intron | 50.0% |
| !! | GCAGTAGCGGATGTAGTACA+GGG | - | chr1_3:1926108-1926127 | Msa0096240:intron | 50.0% |
| GTGGTCGAACCAAATTGCAG+TGG | + | chr1_3:1926237-1926256 | None:intergenic | 50.0% | |
| ! | TTGGTTCGACCACTGCAAGT+AGG | - | chr1_3:1926244-1926263 | Msa0096240:intron | 50.0% |
| GGGTGAAGGATTATCTGAGG+AGG | - | chr1_3:1926430-1926449 | Msa0096240:intron | 50.0% | |
| TGAGGAGGAACTTGCGATGA+TGG | - | chr1_3:1926445-1926464 | Msa0096240:intron | 50.0% | |
| GAGGAGGAACTTGCGATGAT+GGG | - | chr1_3:1926446-1926465 | Msa0096240:intron | 50.0% | |
| GTTGTGTTGGAGCTTTGCTC+TGG | - | chr1_3:1926762-1926781 | Msa0096240:intron | 50.0% | |
| ! | CGGGGTTACTGTTGGTTGAT+TGG | - | chr1_3:1926880-1926899 | Msa0096240:intron | 50.0% |
| CGTTCCCAAAGACTCTTCCT+TGG | - | chr1_3:1926949-1926968 | Msa0096240:intron | 50.0% | |
| CATGCCTTGGGTTTCAACCA+AGG | + | chr1_3:1926969-1926988 | None:intergenic | 50.0% | |
| CTTACAGGGTTCACATGCCT+TGG | + | chr1_3:1926982-1927001 | None:intergenic | 50.0% | |
| GGTATTCGATCGGCTGAGAT+AGG | - | chr1_3:1927059-1927078 | Msa0096240:intron | 50.0% | |
| AAACCGATGTCCGGAGACTT+TGG | - | chr1_3:1927146-1927165 | Msa0096240:intron | 50.0% | |
| TTATGTTGGGAACTGCCGGA+TGG | + | chr1_3:1927200-1927219 | None:intergenic | 50.0% | |
| TCCGGCAGTTCCCAACATAA+TGG | - | chr1_3:1927200-1927219 | Msa0096240:intron | 50.0% | |
| GCCATTATGTTGGGAACTGC+CGG | + | chr1_3:1927204-1927223 | None:intergenic | 50.0% | |
| CATAATGGCAGTTTCGGTGG+AGG | - | chr1_3:1927215-1927234 | Msa0096240:intron | 50.0% | |
| TGGATGTAGTTAAGGCGGAG+AGG | + | chr1_3:1927378-1927397 | None:intergenic | 50.0% | |
| CGAACAGATAAGGGAGAAGG+TGG | + | chr1_3:1927398-1927417 | None:intergenic | 50.0% | |
| ! | GTGTGTCGGAGCTTTGCTAT+GGG | + | chr1_3:1927573-1927592 | None:intergenic | 50.0% |
| TGTTCTCTTTAGGCGGGGTT+GGG | + | chr1_3:1928294-1928313 | None:intergenic | 50.0% | |
| ATGTTCTCTTTAGGCGGGGT+TGG | + | chr1_3:1928295-1928314 | None:intergenic | 50.0% | |
| !! | CAAGCAAAAGCACCCCTTCT+CGG | + | chr1_3:1928612-1928631 | None:intergenic | 50.0% |
| ! | GGTGCTTTTGCTTGTATCCC+TGG | - | chr1_3:1928618-1928637 | Msa0096240:intron | 50.0% |
| ! | GCTTTTGCTTGTATCCCTGG+GGG | - | chr1_3:1928621-1928640 | Msa0096240:intron | 50.0% |
| TGAGGTGGAGGCAATCCTTA+TGG | + | chr1_3:1928745-1928764 | None:intergenic | 50.0% | |
| ! | CATAACCAGTGTTGAGGTGG+AGG | + | chr1_3:1928757-1928776 | None:intergenic | 50.0% |
| AAGTGTGATGACCTGGCAGT+TGG | - | chr1_3:1929354-1929373 | Msa0096240:intron | 50.0% | |
| TCAATACCTTGCCAACTGCC+AGG | + | chr1_3:1929368-1929387 | None:intergenic | 50.0% | |
| GTGGAACAAGGCAGCAAATC+AGG | - | chr1_3:1929453-1929472 | Msa0096240:intron | 50.0% | |
| ! | CCTGTCCTTATTCTAGCTGC+AGG | + | chr1_3:1929710-1929729 | None:intergenic | 50.0% |
| CCTGCAGCTAGAATAAGGAC+AGG | - | chr1_3:1929707-1929726 | Msa0096240:intron | 50.0% | |
| GTCACAGGCTGCATCCAATA+TGG | - | chr1_3:1929750-1929769 | Msa0096240:intron | 50.0% | |
| GCCTGACCAGTTAAAGGATG+AGG | - | chr1_3:1929778-1929797 | Msa0096240:intron | 50.0% | |
| !!! | CCTAGCCTTGGCCTTTTAGT+AGG | + | chr1_3:1929848-1929867 | None:intergenic | 50.0% |
| CCTACTAAAAGGCCAAGGCT+AGG | - | chr1_3:1929845-1929864 | Msa0096240:intron | 50.0% | |
| TCATTACCGCAGGGCATAGA+GGG | + | chr1_3:1929965-1929984 | None:intergenic | 50.0% | |
| ATCATTACCGCAGGGCATAG+AGG | + | chr1_3:1929966-1929985 | None:intergenic | 50.0% | |
| AGAAGTGGTAAGCCCATTGC+TGG | - | chr1_3:1930280-1930299 | Msa0096240:intron | 50.0% | |
| GGCTTGTCTTCAGCTCTTTC+TGG | + | chr1_3:1930638-1930657 | None:intergenic | 50.0% | |
| !!! | GTTTGAGAGTTTTGGAGGGG+AGG | - | chr1_3:1930914-1930933 | Msa0096240:intron | 50.0% |
| !!! | TTGAGAGTTTTGGAGGGGAG+GGG | - | chr1_3:1930916-1930935 | Msa0096240:intron | 50.0% |
| ! | TGTTTGGTTCACAAGGGGAG+GGG | + | chr1_3:1931396-1931415 | None:intergenic | 50.0% |
| ! | GTGTTTGGTTCACAAGGGGA+GGG | + | chr1_3:1931397-1931416 | None:intergenic | 50.0% |
| ! | TGTGTTTGGTTCACAAGGGG+AGG | + | chr1_3:1931398-1931417 | None:intergenic | 50.0% |
| TTCGAGAATTAGGAGGGGAG+GGG | + | chr1_3:1931468-1931487 | None:intergenic | 50.0% | |
| GTTCGAGAATTAGGAGGGGA+GGG | + | chr1_3:1931469-1931488 | None:intergenic | 50.0% | |
| GAACCAAACGGACCCTAAGA+GGG | - | chr1_3:1931485-1931504 | Msa0096240:intron | 50.0% | |
| AACCAAACGGACCCTAAGAG+GGG | - | chr1_3:1931486-1931505 | Msa0096240:intron | 50.0% | |
| !! | CAAGCAAAAGCACCCCTTCT+CGG | + | chr1_3:1928612-1928631 | None:intergenic | 50.0% |
| CCTCATTTGCAGTTCCCCTA+GGG | + | chr1_3:1931621-1931640 | None:intergenic | 50.0% | |
| TCCTCATTTGCAGTTCCCCT+AGG | + | chr1_3:1931622-1931641 | None:intergenic | 50.0% | |
| TGAGGTGGAGGCAATCCTTA+TGG | + | chr1_3:1928745-1928764 | None:intergenic | 50.0% | |
| ! | CATAACCAGTGTTGAGGTGG+AGG | + | chr1_3:1928757-1928776 | None:intergenic | 50.0% |
| ! | ACAGTCTAAGGCAGTTGGCA+AGG | - | chr1_3:1932360-1932379 | Msa0096240:intron | 50.0% |
| GTGGAACAAGGCAGCAAATC+AGG | - | chr1_3:1929453-1929472 | Msa0096240:intron | 50.0% | |
| ! | CCTGTCCTTATTCTAGCTGC+AGG | + | chr1_3:1929710-1929729 | None:intergenic | 50.0% |
| CCTGCAGCTAGAATAAGGAC+AGG | - | chr1_3:1929707-1929726 | Msa0096240:intron | 50.0% | |
| GTCACAGGCTGCATCCAATA+TGG | - | chr1_3:1929750-1929769 | Msa0096240:intron | 50.0% | |
| GCCTGACCAGTTAAAGGATG+AGG | - | chr1_3:1929778-1929797 | Msa0096240:intron | 50.0% | |
| !!! | CCTAGCCTTGGCCTTTTAGT+AGG | + | chr1_3:1929848-1929867 | None:intergenic | 50.0% |
| CCTACTAAAAGGCCAAGGCT+AGG | - | chr1_3:1929845-1929864 | Msa0096240:intron | 50.0% | |
| AGAAGTGGTAAGCCCATTGC+TGG | - | chr1_3:1930280-1930299 | Msa0096240:intron | 50.0% | |
| CGGTCTTGCTGGATATCAGT+TGG | + | chr1_3:1933684-1933703 | None:intergenic | 50.0% | |
| CTTTCCGATTTCGGTCTTGC+TGG | + | chr1_3:1933695-1933714 | None:intergenic | 50.0% | |
| ! | TCTAAAATCCATCCCGCCTC+CGG | - | chr1_3:1933734-1933753 | Msa0096240:intron | 50.0% |
| ! | TTGTTTTCAGCTCGTTCCGG+AGG | + | chr1_3:1933753-1933772 | None:intergenic | 50.0% |
| ! | ATGCGGGAGCTTTAGTGCAT+CGG | - | chr1_3:1933863-1933882 | Msa0096240:intron | 50.0% |
| GGCTTGTCTTCAGCTCTTTC+TGG | + | chr1_3:1930638-1930657 | None:intergenic | 50.0% | |
| GTCATGGGGGATGAACATGA+TGG | - | chr1_3:1934244-1934263 | Msa0096240:intron | 50.0% | |
| ! | GCAGCTGCTTGATTTTGCAC+AGG | + | chr1_3:1934854-1934873 | None:intergenic | 50.0% |
| GGATGTCGACCATGCTGATA+TGG | + | chr1_3:1934905-1934924 | None:intergenic | 50.0% | |
| ATCAGCATGGTCGACATCCT+AGG | - | chr1_3:1934906-1934925 | Msa0096240:CDS | 50.0% | |
| TCAGCATGGTCGACATCCTA+GGG | - | chr1_3:1934907-1934926 | Msa0096240:CDS | 50.0% | |
| TAGGGGAAAGGGTCAAGAAG+AGG | - | chr1_3:1934940-1934959 | Msa0096240:CDS | 50.0% | |
| GCCAAGCAAGATCCTCATCA+CGG | + | chr1_3:1935051-1935070 | None:intergenic | 50.0% | |
| TTAGGTACAAAGGGGTCCTC+GGG | - | chr1_3:1935216-1935235 | Msa0096240:CDS | 50.0% | |
| TTCTCTGCTTCAGATTCCCG+AGG | + | chr1_3:1935235-1935254 | None:intergenic | 50.0% | |
| CAAATGGGAAGAGGAGGAAG+AGG | - | chr1_3:1935304-1935323 | Msa0096240:CDS | 50.0% | |
| AGGAGGAAGAGGTAGAGGAA+GGG | - | chr1_3:1935315-1935334 | Msa0096240:CDS | 50.0% | |
| ACTAGCCGATGACCCTTCCA+AGG | - | chr1_3:1923094-1923113 | Msa0096240:CDS | 55.0% | |
| ! | GGCTCCGATGGATTTGAGGT+CGG | + | chr1_3:1923153-1923172 | None:intergenic | 55.0% |
| GTGTCTCACGGATGGTCACT+CGG | - | chr1_3:1923517-1923536 | Msa0096240:CDS | 55.0% | |
| ! | CTGCAGGTTGGATCTACCAC+AGG | - | chr1_3:1924542-1924561 | Msa0096240:intron | 55.0% |
| ! | CACTGAACTTGGGACTCGGT+GGG | + | chr1_3:1925243-1925262 | None:intergenic | 55.0% |
| TCACTGAACTTGGGACTCGG+TGG | + | chr1_3:1925244-1925263 | None:intergenic | 55.0% | |
| !! | GACCTGTTTCTGAACCGGGT+CGG | + | chr1_3:1925318-1925337 | None:intergenic | 55.0% |
| TTTCACCGCTCCAGCCTTTC+CGG | - | chr1_3:1925409-1925428 | Msa0096240:intron | 55.0% | |
| GCGTGAGATCGTACGATCTC+AGG | - | chr1_3:1925472-1925491 | Msa0096240:intron | 55.0% | |
| GGAAGGGGACTAAGGTGTAG+AGG | - | chr1_3:1925759-1925778 | Msa0096240:intron | 55.0% | |
| GGGGTGAGGTTATGCAGTAG+CGG | - | chr1_3:1926095-1926114 | Msa0096240:intron | 55.0% | |
| ACTGCTGGTCCTACTTGCAG+TGG | + | chr1_3:1926256-1926275 | None:intergenic | 55.0% | |
| !! | GAGGAACTTGCGATGATGGG+TGG | - | chr1_3:1926449-1926468 | Msa0096240:intron | 55.0% |
| GCTGTCCACAAACCGATGTC+CGG | - | chr1_3:1927137-1927156 | Msa0096240:intron | 55.0% | |
| !! | AGTCTCCGGACATCGGTTTG+TGG | + | chr1_3:1927145-1927164 | None:intergenic | 55.0% |
| CCACCAAAGTCTCCGGACAT+CGG | + | chr1_3:1927152-1927171 | None:intergenic | 55.0% | |
| TGGCAGTTTCGGTGGAGGTA+TGG | - | chr1_3:1927220-1927239 | Msa0096240:intron | 55.0% | |
| ! | CAGTTTCGGTGGAGGTATGG+TGG | - | chr1_3:1927223-1927242 | Msa0096240:intron | 55.0% |
| GGTGTGTCGGAGCTTTGCTA+TGG | + | chr1_3:1927574-1927593 | None:intergenic | 55.0% | |
| ATGGGTTCAGACCTGGACGA+AGG | + | chr1_3:1928229-1928248 | None:intergenic | 55.0% | |
| GGAGATCATGGGTTCAGACC+TGG | + | chr1_3:1928236-1928255 | None:intergenic | 55.0% | |
| CGGGGTTGGGTAGCACAATA+GGG | + | chr1_3:1928281-1928300 | None:intergenic | 55.0% | |
| CCTCATTTGCAGTTCCCCCA+GGG | + | chr1_3:1928638-1928657 | None:intergenic | 55.0% | |
| TCCTCATTTGCAGTTCCCCC+AGG | + | chr1_3:1928639-1928658 | None:intergenic | 55.0% | |
| GATTGCCTCCACCTCAACAC+TGG | - | chr1_3:1928749-1928768 | Msa0096240:intron | 55.0% | |
| TGATGACCTGGCAGTTGGCA+AGG | - | chr1_3:1929359-1929378 | Msa0096240:intron | 55.0% | |
| ATTACCGCAGGGCATAGAGG+GGG | + | chr1_3:1929963-1929982 | None:intergenic | 55.0% | |
| CATTACCGCAGGGCATAGAG+GGG | + | chr1_3:1929964-1929983 | None:intergenic | 55.0% | |
| CCAGCGGAATCATTACCGCA+GGG | + | chr1_3:1929974-1929993 | None:intergenic | 55.0% | |
| ACCAGCGGAATCATTACCGC+AGG | + | chr1_3:1929975-1929994 | None:intergenic | 55.0% | |
| TCACTACCCTGCTATGGCAG+AGG | - | chr1_3:1930107-1930126 | Msa0096240:intron | 55.0% | |
| GAGGCCAACTGATATCCAGC+AGG | - | chr1_3:1930321-1930340 | Msa0096240:intron | 55.0% | |
| CGGTCCTGCTGGATATCAGT+TGG | + | chr1_3:1930328-1930347 | None:intergenic | 55.0% | |
| CTTTCCGATTTCGGTCCTGC+TGG | + | chr1_3:1930339-1930358 | None:intergenic | 55.0% | |
| !! | AGCTCGTTCTGGAAGTGGGA+TGG | + | chr1_3:1930389-1930408 | None:intergenic | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr1_3:1930500-1930519 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr1_3:1930501-1930520 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1_3:1930505-1930524 | Msa0096240:intron | 55.0% |
| AGCCTAGTAGTTCGGGGACA+AGG | - | chr1_3:1930654-1930673 | Msa0096240:intron | 55.0% | |
| TCGGGGACAAGGCCAAAAGA+AGG | - | chr1_3:1930665-1930684 | Msa0096240:intron | 55.0% | |
| AGAATTAGGAGGGGAGGGGA+GGG | + | chr1_3:1931464-1931483 | None:intergenic | 55.0% | |
| GGTTCGAGAATTAGGAGGGG+AGG | + | chr1_3:1931470-1931489 | None:intergenic | 55.0% | |
| CGAACCAAACGGACCCTAAG+AGG | - | chr1_3:1931484-1931503 | Msa0096240:intron | 55.0% | |
| CCCTAGGGGAACTGCAAATG+AGG | - | chr1_3:1931618-1931637 | Msa0096240:intron | 55.0% | |
| GATTGCCTCCACCTCAACAC+TGG | - | chr1_3:1928749-1928768 | Msa0096240:intron | 55.0% | |
| ATTACCGCAGGGCATAGAGG+GGG | + | chr1_3:1929963-1929982 | None:intergenic | 55.0% | |
| TCACTACCCTGCTATGGCAG+AGG | - | chr1_3:1930107-1930126 | Msa0096240:intron | 55.0% | |
| ! | TTTTCAGCTCGTTCCGGAGG+CGG | + | chr1_3:1933750-1933769 | None:intergenic | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr1_3:1930500-1930519 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr1_3:1930501-1930520 | None:intergenic | 55.0% | |
| ! | TGCGGGAGCTTTAGTGCATC+GGG | - | chr1_3:1933864-1933883 | Msa0096240:intron | 55.0% |
| AGCCTAGTAGTTCGGGGACA+AGG | - | chr1_3:1930654-1930673 | Msa0096240:intron | 55.0% | |
| TCGGGGACAAGGCCAAAAGA+AGG | - | chr1_3:1930665-1930684 | Msa0096240:intron | 55.0% | |
| CAGCATGGTCGACATCCTAG+GGG | - | chr1_3:1934908-1934927 | Msa0096240:CDS | 55.0% | |
| GCCGTGATGAGGATCTTGCT+TGG | - | chr1_3:1935047-1935066 | Msa0096240:intron | 55.0% | |
| GGAAGAGGAGGAAGAGGTAG+AGG | - | chr1_3:1935310-1935329 | Msa0096240:CDS | 55.0% | |
| GAGGAGGAAGAGGTAGAGGA+AGG | - | chr1_3:1935314-1935333 | Msa0096240:CDS | 55.0% | |
| GGAGGAAGAGGTAGAGGAAG+GGG | - | chr1_3:1935316-1935335 | Msa0096240:CDS | 55.0% | |
| AGAGGTAGAGGAAGGGGTAG+AGG | - | chr1_3:1935322-1935341 | Msa0096240:CDS | 55.0% | |
| AGAGGAAGGGGTAGAGGAAG+AGG | - | chr1_3:1935328-1935347 | Msa0096240:CDS | 55.0% | |
| GAGGAAGGGGTAGAGGAAGA+GGG | - | chr1_3:1935329-1935348 | Msa0096240:CDS | 55.0% | |
| AAGGGGTAGAGGAAGAGGGA+GGG | - | chr1_3:1935333-1935352 | Msa0096240:CDS | 55.0% | |
| TAGAGGAAGAGGGAGGGGAA+GGG | - | chr1_3:1935339-1935358 | Msa0096240:CDS | 55.0% | |
| AAGGGGTAGAGGAAGAGGGA+GGG | - | chr1_3:1935333-1935352 | Msa0096240:CDS | 55.0% | |
| ! | GGAAGGGTCATCGGCTAGTG+CGG | + | chr1_3:1923093-1923112 | None:intergenic | 60.0% |
| GGGTAAGGACTTGGCTCCGA+TGG | + | chr1_3:1923165-1923184 | None:intergenic | 60.0% | |
| CACAGTCACAGTCGCAGTCG+TGG | - | chr1_3:1923659-1923678 | Msa0096240:intron | 60.0% | |
| CTGTGGCTGTCATGCCGTTG+CGG | + | chr1_3:1923956-1923975 | None:intergenic | 60.0% | |
| TGCCGACCCGGTTCAGAAAC+AGG | - | chr1_3:1925313-1925332 | Msa0096240:intron | 60.0% | |
| AATCGCCGGAAAGGCTGGAG+CGG | + | chr1_3:1925417-1925436 | None:intergenic | 60.0% | |
| TCGTGAATCGCCGGAAAGGC+TGG | + | chr1_3:1925422-1925441 | None:intergenic | 60.0% | |
| CGGTTCGTGAATCGCCGGAA+AGG | + | chr1_3:1925426-1925445 | None:intergenic | 60.0% | |
| CAGAGCGGTTCGTGAATCGC+CGG | + | chr1_3:1925431-1925450 | None:intergenic | 60.0% | |
| CCGATGTCCGGAGACTTTGG+TGG | - | chr1_3:1927149-1927168 | Msa0096240:intron | 60.0% | |
| TCGCCTACTCGCAACGGTAC+CGG | + | chr1_3:1927177-1927196 | None:intergenic | 60.0% | |
| GGATGGTCGCCTACTCGCAA+CGG | + | chr1_3:1927183-1927202 | None:intergenic | 60.0% | |
| GTTGCGAGTAGGCGACCATC+CGG | - | chr1_3:1927182-1927201 | Msa0096240:intron | 60.0% | |
| GCGGGGTTGGGTAGCACAAT+AGG | + | chr1_3:1928282-1928301 | None:intergenic | 60.0% | |
| CCCTGGGGGAACTGCAAATG+AGG | - | chr1_3:1928635-1928654 | Msa0096240:intron | 60.0% | |
| CCCTGCGGTAATGATTCCGC+TGG | - | chr1_3:1929971-1929990 | Msa0096240:intron | 60.0% | |
| TATCCCGGACCCTGCGTATG+CGG | - | chr1_3:1930488-1930507 | Msa0096240:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1_3:1930506-1930525 | Msa0096240:intron | 60.0% |
| ! | GGCCTTGTCCCCGAACTACT+AGG | + | chr1_3:1930659-1930678 | None:intergenic | 60.0% |
| !!! | AGAGTTTTGGAGGGGAGGGG+AGG | - | chr1_3:1930919-1930938 | Msa0096240:intron | 60.0% |
| !!! | GAGTTTTGGAGGGGAGGGGA+GGG | - | chr1_3:1930920-1930939 | Msa0096240:intron | 60.0% |
| !!! | AGTTTTGGAGGGGAGGGGAG+GGG | - | chr1_3:1930921-1930940 | Msa0096240:intron | 60.0% |
| TTAGAAGGGGATGGGAGGGG+TGG | - | chr1_3:1930976-1930995 | Msa0096240:intron | 60.0% | |
| TAGAAGGGGATGGGAGGGGT+GGG | - | chr1_3:1930977-1930996 | Msa0096240:intron | 60.0% | |
| TGGTTCACAAGGGGAGGGGA+GGG | + | chr1_3:1931392-1931411 | None:intergenic | 60.0% | |
| TTGGTTCACAAGGGGAGGGG+AGG | + | chr1_3:1931393-1931412 | None:intergenic | 60.0% | |
| GAATTAGGAGGGGAGGGGAG+GGG | + | chr1_3:1931463-1931482 | None:intergenic | 60.0% | |
| GAGAATTAGGAGGGGAGGGG+AGG | + | chr1_3:1931465-1931484 | None:intergenic | 60.0% | |
| GTCCCCTCTTAGGGTCCGTT+TGG | + | chr1_3:1931491-1931510 | None:intergenic | 60.0% | |
| TTTCAGCTCGTTCCGGAGGC+GGG | + | chr1_3:1933749-1933768 | None:intergenic | 60.0% | |
| TATCCCGGACCCTGCGTATG+CGG | - | chr1_3:1930488-1930507 | Msa0096240:intron | 60.0% | |
| ! | GGCCTTGTCCCCGAACTACT+AGG | + | chr1_3:1930659-1930678 | None:intergenic | 60.0% |
| ATCCTAGGGGTCGAGGACGT+AGG | - | chr1_3:1934921-1934940 | Msa0096240:CDS | 60.0% | |
| TCCTAGGGGTCGAGGACGTA+GGG | - | chr1_3:1934922-1934941 | Msa0096240:CDS | 60.0% | |
| GGTCGAGGACGTAGGGGAAA+GGG | - | chr1_3:1934929-1934948 | Msa0096240:CDS | 60.0% | |
| GAAGGGGTAGAGGAAGAGGG+AGG | - | chr1_3:1935332-1935351 | Msa0096240:CDS | 60.0% | |
| AGGGGTAGAGGAAGAGGGAG+GGG | - | chr1_3:1935334-1935353 | Msa0096240:CDS | 60.0% | |
| GTAGAGGAAGAGGGAGGGGA+AGG | - | chr1_3:1935338-1935357 | Msa0096240:CDS | 60.0% | |
| AGAGGAAGAGGGAGGGGAAG+GGG | - | chr1_3:1935340-1935359 | Msa0096240:CDS | 60.0% | |
| AGGGGAAGGGGTAGAGGAAG+AGG | - | chr1_3:1935352-1935371 | Msa0096240:CDS | 60.0% | |
| GGGGAAGGGGTAGAGGAAGA+GGG | - | chr1_3:1935353-1935372 | Msa0096240:CDS | 60.0% | |
| GAAGGGGTAGAGGAAGAGGG+AGG | - | chr1_3:1935332-1935351 | Msa0096240:CDS | 60.0% | |
| AGGGGTAGAGGAAGAGGGAG+GGG | - | chr1_3:1935334-1935353 | Msa0096240:CDS | 60.0% | |
| GAAACGGTGCGATGCCGACC+CGG | - | chr1_3:1925301-1925320 | Msa0096240:intron | 65.0% | |
| ! | CTGGAGCGGTGAAAGCGCAG+AGG | + | chr1_3:1925403-1925422 | None:intergenic | 65.0% |
| CACGAACCGCTCTGACACGG+TGG | - | chr1_3:1925437-1925456 | Msa0096240:intron | 65.0% | |
| GCATCTGTGGGTGGGTCCGT+AGG | + | chr1_3:1926374-1926393 | None:intergenic | 65.0% | |
| !! | TCCGGAGACTTTGGTGGCGC+CGG | - | chr1_3:1927155-1927174 | Msa0096240:intron | 65.0% |
| ACCGGCGCCACCAAAGTCTC+CGG | + | chr1_3:1927159-1927178 | None:intergenic | 65.0% | |
| ACCTCCCCCTCTATGCCCTG+CGG | - | chr1_3:1929956-1929975 | Msa0096240:intron | 65.0% | |
| ATCCCGGACCCTGCGTATGC+GGG | - | chr1_3:1930489-1930508 | Msa0096240:intron | 65.0% | |
| AGAAGGGGATGGGAGGGGTG+GGG | - | chr1_3:1930978-1930997 | Msa0096240:intron | 65.0% | |
| ACCTCCCCCTCTATGCCCTG+CGG | - | chr1_3:1929956-1929975 | Msa0096240:intron | 65.0% | |
| ATCCCGGACCCTGCGTATGC+GGG | - | chr1_3:1930489-1930508 | Msa0096240:intron | 65.0% | |
| GGTCGACATCCTAGGGGTCG+AGG | - | chr1_3:1934914-1934933 | Msa0096240:CDS | 65.0% | |
| CCTAGGGGTCGAGGACGTAG+GGG | - | chr1_3:1934923-1934942 | Msa0096240:CDS | 65.0% | |
| GGGTCGAGGACGTAGGGGAA+AGG | - | chr1_3:1934928-1934947 | Msa0096240:CDS | 65.0% | |
| AGAGGGAGGGGAAGGGGTAG+AGG | - | chr1_3:1935346-1935365 | Msa0096240:CDS | 65.0% | |
| ! | GCGCCGGTACCGTTGCGAGT+AGG | - | chr1_3:1927171-1927190 | Msa0096240:intron | 70.0% |
| ACCGCAGGGCATAGAGGGGG+AGG | + | chr1_3:1929960-1929979 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr1_3:1930494-1930513 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr1_3:1930495-1930514 | None:intergenic | 70.0% | |
| ACCGCAGGGCATAGAGGGGG+AGG | + | chr1_3:1929960-1929979 | None:intergenic | 70.0% | |
| AGCTCGTTCCGGAGGCGGGA+TGG | + | chr1_3:1933745-1933764 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr1_3:1930494-1930513 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr1_3:1930495-1930514 | None:intergenic | 70.0% | |
| CCCCTACGTCCTCGACCCCT+AGG | + | chr1_3:1934926-1934945 | None:intergenic | 70.0% | |
| GGGATGGGAGGGGTGGGGAG+AGG | - | chr1_3:1930983-1931002 | Msa0096240:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 1922984 | 1935459 | 1922984 | ID=Msa0096240;Name=Msa0096240 |
| chr1_3 | mRNA | 1922984 | 1935459 | 1922984 | ID=Msa0096240-mRNA-1;Parent=Msa0096240;Name=Msa0096240-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.44|0.4|0.9|0.44|0.3|10|0|479 |
| chr1_3 | exon | 1935214 | 1935459 | 1935214 | ID=Msa0096240-mRNA-1:exon:422;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1934839 | 1935006 | 1934839 | ID=Msa0096240-mRNA-1:exon:421;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1933880 | 1934096 | 1933880 | ID=Msa0096240-mRNA-1:exon:420;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1928022 | 1928183 | 1928022 | ID=Msa0096240-mRNA-1:exon:419;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1927757 | 1927804 | 1927757 | ID=Msa0096240-mRNA-1:exon:418;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1924666 | 1924827 | 1924666 | ID=Msa0096240-mRNA-1:exon:417;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1924399 | 1924446 | 1924399 | ID=Msa0096240-mRNA-1:exon:416;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1923338 | 1923573 | 1923338 | ID=Msa0096240-mRNA-1:exon:415;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1923082 | 1923223 | 1923082 | ID=Msa0096240-mRNA-1:exon:414;Parent=Msa0096240-mRNA-1 |
| chr1_3 | exon | 1922984 | 1922991 | 1922984 | ID=Msa0096240-mRNA-1:exon:413;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1935214 | 1935459 | 1935214 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1934839 | 1935006 | 1934839 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1933880 | 1934096 | 1933880 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1928022 | 1928183 | 1928022 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1927757 | 1927804 | 1927757 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1924666 | 1924827 | 1924666 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1924399 | 1924446 | 1924399 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1923338 | 1923573 | 1923338 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1923082 | 1923223 | 1923082 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| chr1_3 | CDS | 1922984 | 1922991 | 1922984 | ID=Msa0096240-mRNA-1:cds;Parent=Msa0096240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
