Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272480 | sp|Q39202|RLK1_ARATH | 41.727 | 417 | 215 | 13 | 182 | 579 | 23 | 430 | 6.97e-89 | 296 |
Msa1272480 | sp|Q39202|RLK1_ARATH | 34.130 | 293 | 135 | 14 | 1 | 241 | 4 | 290 | 5.40e-21 | 101 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272480 | G7LEC0 | 61.053 | 190 | 46 | 4 | 22 | 185 | 28 | 215 | 2.00e-54 | 201 |
Msa1272480 | G7LEC0 | 96.766 | 402 | 13 | 0 | 193 | 594 | 36 | 437 | 0.0 | 806 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006700 | Msa1272480 | 0.822583 | 2.191967e-53 | -8.615850e-47 |
Msa0008850 | Msa1272480 | 0.812758 | 3.609359e-51 | -8.615850e-47 |
Msa0020630 | Msa1272480 | 0.841566 | 4.396337e-58 | -8.615850e-47 |
Msa0043940 | Msa1272480 | 0.814155 | 1.779505e-51 | -8.615850e-47 |
Msa0044710 | Msa1272480 | 0.840854 | 6.763976e-58 | -8.615850e-47 |
Msa0055280 | Msa1272480 | 0.830301 | 3.171897e-55 | -8.615850e-47 |
Msa0060600 | Msa1272480 | 0.805394 | 1.363623e-49 | -8.615850e-47 |
Msa0068410 | Msa1272480 | 0.834355 | 3.143863e-56 | -8.615850e-47 |
Msa0086090 | Msa1272480 | 0.818761 | 1.656240e-52 | -8.615850e-47 |
Msa0094100 | Msa1272480 | 0.830165 | 3.423380e-55 | -8.615850e-47 |
Msa0101060 | Msa1272480 | 0.826192 | 3.104214e-54 | -8.615850e-47 |
Msa0105340 | Msa1272480 | 0.800947 | 1.134578e-48 | -8.615850e-47 |
Msa0111310 | Msa1272480 | 0.801348 | 9.393893e-49 | -8.615850e-47 |
Msa0114250 | Msa1272480 | 0.824051 | 9.950844e-54 | -8.615850e-47 |
Msa0610370 | Msa1272480 | 0.831330 | 1.774627e-55 | -8.615850e-47 |
Msa0620640 | Msa1272480 | 0.838417 | 2.912460e-57 | -8.615850e-47 |
Msa0624730 | Msa1272480 | 0.800923 | 1.147419e-48 | -8.615850e-47 |
Msa0628100 | Msa1272480 | 0.819585 | 1.074849e-52 | -8.615850e-47 |
Msa0638280 | Msa1272480 | 0.825063 | 5.749268e-54 | -8.615850e-47 |
Msa0638320 | Msa1272480 | 0.821090 | 4.856483e-53 | -8.615850e-47 |
Msa0647000 | Msa1272480 | 0.820512 | 6.596039e-53 | -8.615850e-47 |
Msa0649310 | Msa1272480 | 0.800148 | 1.651112e-48 | -8.615850e-47 |
Msa0650650 | Msa1272480 | 0.802833 | 4.650310e-49 | -8.615850e-47 |
Msa0650740 | Msa1272480 | 0.806022 | 1.006277e-49 | -8.615850e-47 |
Msa0650900 | Msa1272480 | 0.833980 | 3.904661e-56 | -8.615850e-47 |
Msa0657050 | Msa1272480 | 0.805163 | 1.523902e-49 | -8.615850e-47 |
Msa0672120 | Msa1272480 | 0.804553 | 2.044530e-49 | -8.615850e-47 |
Msa0672810 | Msa1272480 | 0.802405 | 5.697483e-49 | -8.615850e-47 |
Msa0677270 | Msa1272480 | 0.828674 | 7.886301e-55 | -8.615850e-47 |
Msa0701030 | Msa1272480 | 0.809538 | 1.801210e-50 | -8.615850e-47 |
Msa0707780 | Msa1272480 | 0.803198 | 3.907992e-49 | -8.615850e-47 |
Msa0714600 | Msa1272480 | 0.820008 | 8.606824e-53 | -8.615850e-47 |
Msa0719340 | Msa1272480 | 0.803698 | 3.078283e-49 | -8.615850e-47 |
Msa0722930 | Msa1272480 | 0.808175 | 3.523261e-50 | -8.615850e-47 |
Msa0726610 | Msa1272480 | 0.814282 | 1.667900e-51 | -8.615850e-47 |
Msa0730180 | Msa1272480 | 0.806149 | 9.462792e-50 | -8.615850e-47 |
Msa0731710 | Msa1272480 | 0.803656 | 3.141590e-49 | -8.615850e-47 |
Msa0734660 | Msa1272480 | 0.811708 | 6.115579e-51 | -8.615850e-47 |
Msa0743640 | Msa1272480 | 0.802993 | 4.310436e-49 | -8.615850e-47 |
Msa0743650 | Msa1272480 | 0.820110 | 8.154575e-53 | -8.615850e-47 |
Msa0750380 | Msa1272480 | 0.804455 | 2.142995e-49 | -8.615850e-47 |
Msa0752580 | Msa1272480 | 0.809535 | 1.803733e-50 | -8.615850e-47 |
Msa0754180 | Msa1272480 | 0.800678 | 1.287631e-48 | -8.615850e-47 |
Msa0754500 | Msa1272480 | 0.812523 | 4.061580e-51 | -8.615850e-47 |
Msa0760890 | Msa1272480 | 0.833098 | 6.480417e-56 | -8.615850e-47 |
Msa0770430 | Msa1272480 | 0.807434 | 5.065089e-50 | -8.615850e-47 |
Msa0772150 | Msa1272480 | 0.820753 | 5.805672e-53 | -8.615850e-47 |
Msa0775580 | Msa1272480 | 0.803503 | 3.379660e-49 | -8.615850e-47 |
Msa0776220 | Msa1272480 | 0.800737 | 1.252242e-48 | -8.615850e-47 |
Msa0789270 | Msa1272480 | 0.803093 | 4.109679e-49 | -8.615850e-47 |
Msa0789280 | Msa1272480 | 0.806941 | 6.439928e-50 | -8.615850e-47 |
Msa0789290 | Msa1272480 | 0.808356 | 3.223797e-50 | -8.615850e-47 |
Msa0789300 | Msa1272480 | 0.808790 | 2.604272e-50 | -8.615850e-47 |
Msa0792510 | Msa1272480 | 0.834704 | 2.570135e-56 | -8.615850e-47 |
Msa0811000 | Msa1272480 | 0.800886 | 1.167765e-48 | -8.615850e-47 |
Msa0828570 | Msa1272480 | 0.824899 | 6.285853e-54 | -8.615850e-47 |
Msa0830720 | Msa1272480 | 0.805422 | 1.345518e-49 | -8.615850e-47 |
Msa0830900 | Msa1272480 | 0.810778 | 9.730918e-51 | -8.615850e-47 |
Msa0834460 | Msa1272480 | 0.802553 | 5.311795e-49 | -8.615850e-47 |
Msa0140910 | Msa1272480 | 0.826029 | 3.393659e-54 | -8.615850e-47 |
Msa0153430 | Msa1272480 | 0.840060 | 1.091706e-57 | -8.615850e-47 |
Msa0153440 | Msa1272480 | 0.818474 | 1.923355e-52 | -8.615850e-47 |
Msa0155610 | Msa1272480 | 0.811224 | 7.790515e-51 | -8.615850e-47 |
Msa0159750 | Msa1272480 | 0.838461 | 2.836862e-57 | -8.615850e-47 |
Msa0168100 | Msa1272480 | 0.809312 | 2.013667e-50 | -8.615850e-47 |
Msa0182640 | Msa1272480 | 0.805610 | 1.228204e-49 | -8.615850e-47 |
Msa0182930 | Msa1272480 | 0.835532 | 1.588776e-56 | -8.615850e-47 |
Msa0183610 | Msa1272480 | 0.802837 | 4.642469e-49 | -8.615850e-47 |
Msa0185640 | Msa1272480 | -0.812882 | 3.390515e-51 | -8.615850e-47 |
Msa0193760 | Msa1272480 | 0.830646 | 2.611406e-55 | -8.615850e-47 |
Msa0198440 | Msa1272480 | 0.840051 | 1.097314e-57 | -8.615850e-47 |
Msa0200950 | Msa1272480 | -0.812193 | 4.796190e-51 | -8.615850e-47 |
Msa0208630 | Msa1272480 | 0.815143 | 1.074987e-51 | -8.615850e-47 |
Msa0211010 | Msa1272480 | 0.823030 | 1.725027e-53 | -8.615850e-47 |
Msa0213080 | Msa1272480 | 0.837485 | 5.055880e-57 | -8.615850e-47 |
Msa0223100 | Msa1272480 | 0.827463 | 1.542890e-54 | -8.615850e-47 |
Msa0223290 | Msa1272480 | 0.832850 | 7.469078e-56 | -8.615850e-47 |
Msa0223380 | Msa1272480 | 0.831777 | 1.377493e-55 | -8.615850e-47 |
Msa0232860 | Msa1272480 | 0.807787 | 4.262641e-50 | -8.615850e-47 |
Msa0235550 | Msa1272480 | 0.812516 | 4.075570e-51 | -8.615850e-47 |
Msa1243130 | Msa1272480 | 0.805305 | 1.423041e-49 | -8.615850e-47 |
Msa1256540 | Msa1272480 | -0.802057 | 6.719074e-49 | -8.615850e-47 |
Msa1258280 | Msa1272480 | 0.805375 | 1.376209e-49 | -8.615850e-47 |
Msa1272480 | Msa1272950 | 0.851838 | 6.835503e-61 | -8.615850e-47 |
Msa1272480 | Msa1272960 | 0.803462 | 3.445579e-49 | -8.615850e-47 |
Msa1272480 | Msa1280130 | 0.802995 | 4.306380e-49 | -8.615850e-47 |
Msa1272480 | Msa1282920 | 0.815825 | 7.579265e-52 | -8.615850e-47 |
Msa1272480 | Msa1296960 | -0.803620 | 3.196396e-49 | -8.615850e-47 |
Msa1272480 | Msa1297090 | 0.802961 | 4.376307e-49 | -8.615850e-47 |
Msa1272480 | Msa1298290 | 0.805013 | 1.638552e-49 | -8.615850e-47 |
Msa1272480 | Msa1306200 | 0.801943 | 7.093922e-49 | -8.615850e-47 |
Msa1272480 | Msa1308480 | 0.802819 | 4.681653e-49 | -8.615850e-47 |
Msa1272480 | Msa1308590 | 0.825690 | 4.085543e-54 | -8.615850e-47 |
Msa1272480 | Msa1308640 | 0.815197 | 1.045883e-51 | -8.615850e-47 |
Msa1272480 | Msa1317710 | 0.818190 | 2.230696e-52 | -8.615850e-47 |
Msa1272480 | Msa1355950 | 0.812857 | 3.432353e-51 | -8.615850e-47 |
Msa1272480 | Msa1358870 | -0.837203 | 5.970304e-57 | -8.615850e-47 |
Msa1272480 | Msa1361190 | 0.801597 | 8.353252e-49 | -8.615850e-47 |
Msa1272480 | Msa1369530 | 0.807242 | 5.563269e-50 | -8.615850e-47 |
Msa1272480 | Msa1373950 | 0.829260 | 5.684784e-55 | -8.615850e-47 |
Msa1272480 | Msa1385620 | 0.805084 | 1.583169e-49 | -8.615850e-47 |
Msa1272480 | Msa1419110 | 0.802098 | 6.592320e-49 | -8.615850e-47 |
Msa1272480 | Msa1421870 | 0.817110 | 3.907737e-52 | -8.615850e-47 |
Msa1272480 | Msa1427830 | 0.860126 | 2.566998e-63 | -8.615850e-47 |
Msa1272480 | Msa1439120 | 0.816252 | 6.085884e-52 | -8.615850e-47 |
Msa1272480 | Msa1439230 | 0.802447 | 5.587091e-49 | -8.615850e-47 |
Msa1272480 | Msa1440220 | 0.811140 | 8.126381e-51 | -8.615850e-47 |
Msa1272480 | Msa1447160 | -0.803043 | 4.208385e-49 | -8.615850e-47 |
Msa1272480 | Msa1450020 | 0.831021 | 2.113237e-55 | -8.615850e-47 |
Msa1272480 | Msa1454110 | 0.858028 | 1.090748e-62 | -8.615850e-47 |
Msa1272480 | Msa1455660 | 0.811044 | 8.523711e-51 | -8.615850e-47 |
Msa1272480 | Msa1460310 | -0.808823 | 2.562175e-50 | -8.615850e-47 |
Msa1272480 | Msa1461250 | -0.802235 | 6.176491e-49 | -8.615850e-47 |
Msa0368660 | Msa1272480 | 0.803734 | 3.026852e-49 | -8.615850e-47 |
Msa0371540 | Msa1272480 | 0.822394 | 2.425386e-53 | -8.615850e-47 |
Msa0371570 | Msa1272480 | 0.821403 | 4.112390e-53 | -8.615850e-47 |
Msa0377280 | Msa1272480 | 0.802431 | 5.628519e-49 | -8.615850e-47 |
Msa0380040 | Msa1272480 | 0.811583 | 6.511866e-51 | -8.615850e-47 |
Msa0389060 | Msa1272480 | 0.850287 | 1.871521e-60 | -8.615850e-47 |
Msa0401340 | Msa1272480 | 0.822463 | 2.337641e-53 | -8.615850e-47 |
Msa0404220 | Msa1272480 | 0.801577 | 8.433660e-49 | -8.615850e-47 |
Msa0413740 | Msa1272480 | 0.800901 | 1.159734e-48 | -8.615850e-47 |
Msa0418430 | Msa1272480 | 0.816808 | 4.568944e-52 | -8.615850e-47 |
Msa0419620 | Msa1272480 | -0.806291 | 8.832819e-50 | -8.615850e-47 |
Msa0419990 | Msa1272480 | 0.811738 | 6.026216e-51 | -8.615850e-47 |
Msa0429290 | Msa1272480 | 0.807085 | 6.005298e-50 | -8.615850e-47 |
Msa0431520 | Msa1272480 | 0.810778 | 9.731154e-51 | -8.615850e-47 |
Msa0431830 | Msa1272480 | 0.840835 | 6.844690e-58 | -8.615850e-47 |
Msa0442850 | Msa1272480 | 0.806077 | 9.801347e-50 | -8.615850e-47 |
Msa0448080 | Msa1272480 | 0.815085 | 1.107325e-51 | -8.615850e-47 |
Msa0448120 | Msa1272480 | 0.835987 | 1.218076e-56 | -8.615850e-47 |
Msa0458790 | Msa1272480 | 0.801860 | 7.376880e-49 | -8.615850e-47 |
Msa0462590 | Msa1272480 | 0.820449 | 6.819537e-53 | -8.615850e-47 |
Msa0466060 | Msa1272480 | 0.815337 | 9.735178e-52 | -8.615850e-47 |
Msa0467920 | Msa1272480 | -0.817409 | 3.347964e-52 | -8.615850e-47 |
Msa0467960 | Msa1272480 | -0.806936 | 6.458125e-50 | -8.615850e-47 |
Msa0475580 | Msa1272480 | 0.808064 | 3.720241e-50 | -8.615850e-47 |
Msa0480320 | Msa1272480 | 0.823090 | 1.670035e-53 | -8.615850e-47 |
Msa1004210 | Msa1272480 | 0.841256 | 5.304581e-58 | -8.615850e-47 |
Msa1004260 | Msa1272480 | 0.802214 | 6.237555e-49 | -8.615850e-47 |
Msa1014350 | Msa1272480 | 0.804412 | 2.187397e-49 | -8.615850e-47 |
Msa1016110 | Msa1272480 | 0.812241 | 4.680357e-51 | -8.615850e-47 |
Msa1036390 | Msa1272480 | 0.828774 | 7.456265e-55 | -8.615850e-47 |
Msa1044040 | Msa1272480 | 0.821544 | 3.817087e-53 | -8.615850e-47 |
Msa1046610 | Msa1272480 | 0.843657 | 1.224583e-58 | -8.615850e-47 |
Msa1055360 | Msa1272480 | 0.816439 | 5.527673e-52 | -8.615850e-47 |
Msa1072350 | Msa1272480 | 0.815781 | 7.751888e-52 | -8.615850e-47 |
Msa1076680 | Msa1272480 | 0.829645 | 4.584862e-55 | -8.615850e-47 |
Msa1093390 | Msa1272480 | 0.807581 | 4.713180e-50 | -8.615850e-47 |
Msa1097430 | Msa1272480 | 0.802238 | 6.169171e-49 | -8.615850e-47 |
Msa1102540 | Msa1272480 | 0.822776 | 1.976769e-53 | -8.615850e-47 |
Msa0240780 | Msa1272480 | 0.820520 | 6.569494e-53 | -8.615850e-47 |
Msa0252180 | Msa1272480 | 0.823338 | 1.462038e-53 | -8.615850e-47 |
Msa0253370 | Msa1272480 | 0.825035 | 5.837928e-54 | -8.615850e-47 |
Msa0258670 | Msa1272480 | -0.809863 | 1.533435e-50 | -8.615850e-47 |
Msa0264940 | Msa1272480 | -0.803494 | 3.393343e-49 | -8.615850e-47 |
Msa0265210 | Msa1272480 | 0.812977 | 3.231667e-51 | -8.615850e-47 |
Msa0265820 | Msa1272480 | 0.829345 | 5.422194e-55 | -8.615850e-47 |
Msa0274520 | Msa1272480 | 0.810832 | 9.476292e-51 | -8.615850e-47 |
Msa0278670 | Msa1272480 | 0.836163 | 1.099240e-56 | -8.615850e-47 |
Msa0282170 | Msa1272480 | 0.843739 | 1.164521e-58 | -8.615850e-47 |
Msa0284870 | Msa1272480 | 0.802436 | 5.614463e-49 | -8.615850e-47 |
Msa0288240 | Msa1272480 | 0.815183 | 1.053461e-51 | -8.615850e-47 |
Msa0290650 | Msa1272480 | 0.811470 | 6.890270e-51 | -8.615850e-47 |
Msa0292180 | Msa1272480 | 0.843982 | 1.001922e-58 | -8.615850e-47 |
Msa0296610 | Msa1272480 | 0.821284 | 4.381357e-53 | -8.615850e-47 |
Msa0301980 | Msa1272480 | 0.816722 | 4.776521e-52 | -8.615850e-47 |
Msa0302990 | Msa1272480 | -0.808862 | 2.513527e-50 | -8.615850e-47 |
Msa0318070 | Msa1272480 | 0.835986 | 1.219143e-56 | -8.615850e-47 |
Msa0326670 | Msa1272480 | 0.823361 | 1.443979e-53 | -8.615850e-47 |
Msa0330400 | Msa1272480 | 0.812454 | 4.205309e-51 | -8.615850e-47 |
Msa0342340 | Msa1272480 | -0.801311 | 9.561250e-49 | -8.615850e-47 |
Msa0354390 | Msa1272480 | 0.824316 | 8.622701e-54 | -8.615850e-47 |
Msa0357380 | Msa1272480 | 0.806649 | 7.422894e-50 | -8.615850e-47 |
Msa0357390 | Msa1272480 | 0.817339 | 3.471733e-52 | -8.615850e-47 |
Msa0358170 | Msa1272480 | 0.811314 | 7.448086e-51 | -8.615850e-47 |
Msa1118140 | Msa1272480 | 0.806409 | 8.342249e-50 | -8.615850e-47 |
Msa1133660 | Msa1272480 | 0.801579 | 8.426182e-49 | -8.615850e-47 |
Msa1140010 | Msa1272480 | 0.819639 | 1.045015e-52 | -8.615850e-47 |
Msa1159360 | Msa1272480 | 0.807158 | 5.794604e-50 | -8.615850e-47 |
Msa1182830 | Msa1272480 | 0.854725 | 1.016638e-61 | -8.615850e-47 |
Msa1204980 | Msa1272480 | -0.807475 | 4.963268e-50 | -8.615850e-47 |
Msa1205010 | Msa1272480 | -0.816805 | 4.575018e-52 | -8.615850e-47 |
Msa1206020 | Msa1272480 | 0.805048 | 1.611393e-49 | -8.615850e-47 |
Msa1207480 | Msa1272480 | -0.801161 | 1.026109e-48 | -8.615850e-47 |
Msa1221200 | Msa1272480 | -0.829440 | 5.142723e-55 | -8.615850e-47 |
Msa0490300 | Msa1272480 | 0.814794 | 1.284895e-51 | -8.615850e-47 |
Msa0490350 | Msa1272480 | 0.838607 | 2.600898e-57 | -8.615850e-47 |
Msa0502500 | Msa1272480 | 0.808867 | 2.508183e-50 | -8.615850e-47 |
Msa0505390 | Msa1272480 | 0.805831 | 1.104184e-49 | -8.615850e-47 |
Msa0508200 | Msa1272480 | 0.836465 | 9.212237e-57 | -8.615850e-47 |
Msa0517340 | Msa1272480 | 0.818276 | 2.132607e-52 | -8.615850e-47 |
Msa0519220 | Msa1272480 | 0.819699 | 1.012593e-52 | -8.615850e-47 |
Msa0520220 | Msa1272480 | 0.815373 | 9.556835e-52 | -8.615850e-47 |
Msa0530950 | Msa1272480 | 0.822765 | 1.988484e-53 | -8.615850e-47 |
Msa0535030 | Msa1272480 | 0.811904 | 5.543043e-51 | -8.615850e-47 |
Msa0535060 | Msa1272480 | 0.821237 | 4.493207e-53 | -8.615850e-47 |
Msa0540070 | Msa1272480 | 0.815921 | 7.215111e-52 | -8.615850e-47 |
Msa0549740 | Msa1272480 | 0.817942 | 2.538043e-52 | -8.615850e-47 |
Msa0555950 | Msa1272480 | 0.812494 | 4.121955e-51 | -8.615850e-47 |
Msa0564930 | Msa1272480 | 0.808944 | 2.414321e-50 | -8.615850e-47 |
Msa0574170 | Msa1272480 | 0.803172 | 3.957534e-49 | -8.615850e-47 |
Msa0576600 | Msa1272480 | 0.802233 | 6.183415e-49 | -8.615850e-47 |
Msa0579290 | Msa1272480 | 0.818524 | 1.873710e-52 | -8.615850e-47 |
Msa0579340 | Msa1272480 | 0.812037 | 5.186122e-51 | -8.615850e-47 |
Msa0579390 | Msa1272480 | 0.821024 | 5.028905e-53 | -8.615850e-47 |
Msa0582110 | Msa1272480 | 0.810009 | 1.425947e-50 | -8.615850e-47 |
Msa0583790 | Msa1272480 | 0.812949 | 3.276587e-51 | -8.615850e-47 |
Msa0593810 | Msa1272480 | 0.814829 | 1.262056e-51 | -8.615850e-47 |
Msa0847200 | Msa1272480 | 0.828999 | 6.578481e-55 | -8.615850e-47 |
Msa0848360 | Msa1272480 | 0.807383 | 5.191007e-50 | -8.615850e-47 |
Msa0848380 | Msa1272480 | 0.809352 | 1.974144e-50 | -8.615850e-47 |
Msa0863250 | Msa1272480 | 0.802878 | 4.551143e-49 | -8.615850e-47 |
Msa0863770 | Msa1272480 | 0.818031 | 2.422886e-52 | -8.615850e-47 |
Msa0887070 | Msa1272480 | 0.801290 | 9.653919e-49 | -8.615850e-47 |
Msa0899700 | Msa1272480 | 0.808988 | 2.363157e-50 | -8.615850e-47 |
Msa0903730 | Msa1272480 | 0.810250 | 1.265400e-50 | -8.615850e-47 |
Msa0909710 | Msa1272480 | 0.813122 | 3.002784e-51 | -8.615850e-47 |
Msa0950620 | Msa1272480 | 0.816626 | 5.019424e-52 | -8.615850e-47 |
Msa0964680 | Msa1272480 | 0.832280 | 1.034593e-55 | -8.615850e-47 |
Msa0970050 | Msa1272480 | 0.805797 | 1.122304e-49 | -8.615850e-47 |
Msa0973230 | Msa1272480 | 0.841090 | 5.864901e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272480 | MtrunA17_Chr8g0338511 | 96.766 | 402 | 13 | 0 | 193 | 594 | 36 | 437 | 0.0 | 806 |
Msa1272480 | MtrunA17_Chr8g0338511 | 61.053 | 190 | 46 | 4 | 22 | 185 | 28 | 215 | 3.86e-58 | 201 |
Msa1272480 | MtrunA17_Chr8g0338471 | 78.908 | 403 | 80 | 2 | 193 | 594 | 31 | 429 | 0.0 | 662 |
Msa1272480 | MtrunA17_Chr8g0338471 | 58.549 | 193 | 55 | 5 | 16 | 185 | 17 | 207 | 1.62e-54 | 198 |
Msa1272480 | MtrunA17_Chr8g0338501 | 77.419 | 403 | 86 | 2 | 193 | 594 | 60 | 458 | 0.0 | 647 |
Msa1272480 | MtrunA17_Chr8g0338501 | 57.368 | 190 | 56 | 5 | 19 | 185 | 49 | 236 | 4.39e-50 | 186 |
Msa1272480 | MtrunA17_Chr8g0338521 | 69.972 | 363 | 98 | 5 | 198 | 557 | 6 | 360 | 1.75e-171 | 491 |
Msa1272480 | MtrunA17_Chr8g0338521 | 56.983 | 179 | 48 | 6 | 35 | 185 | 6 | 183 | 5.95e-45 | 163 |
Msa1272480 | MtrunA17_Chr8g0338531 | 67.045 | 352 | 93 | 4 | 250 | 594 | 8 | 343 | 3.09e-151 | 453 |
Msa1272480 | MtrunA17_Chr8g0338531 | 50.000 | 130 | 38 | 4 | 78 | 185 | 7 | 131 | 1.61e-21 | 99.4 |
Msa1272480 | MtrunA17_Chr2g0311541 | 45.088 | 397 | 213 | 5 | 194 | 587 | 22 | 416 | 1.56e-113 | 357 |
Msa1272480 | MtrunA17_Chr2g0311541 | 36.082 | 194 | 89 | 8 | 11 | 175 | 3 | 190 | 2.25e-21 | 99.0 |
Msa1272480 | MtrunA17_Chr2g0311551 | 45.316 | 395 | 211 | 5 | 194 | 587 | 263 | 653 | 2.09e-113 | 362 |
Msa1272480 | MtrunA17_Chr2g0311551 | 38.378 | 185 | 83 | 7 | 27 | 185 | 259 | 438 | 1.06e-22 | 103 |
Msa1272480 | MtrunA17_Chr8g0338481 | 67.782 | 239 | 52 | 1 | 355 | 593 | 1 | 214 | 6.66e-111 | 332 |
Msa1272480 | MtrunA17_Chr2g0311521 | 44.444 | 396 | 215 | 5 | 194 | 587 | 264 | 656 | 6.03e-108 | 348 |
Msa1272480 | MtrunA17_Chr2g0311521 | 39.655 | 174 | 77 | 5 | 28 | 175 | 261 | 432 | 2.41e-23 | 105 |
Msa1272480 | MtrunA17_Chr5g0399591 | 41.604 | 399 | 208 | 12 | 201 | 583 | 34 | 423 | 2.57e-97 | 314 |
Msa1272480 | MtrunA17_Chr5g0399591 | 34.568 | 162 | 71 | 7 | 38 | 167 | 34 | 192 | 1.22e-14 | 77.4 |
Msa1272480 | MtrunA17_Chr5g0399561 | 40.050 | 402 | 216 | 12 | 198 | 583 | 32 | 424 | 9.23e-92 | 300 |
Msa1272480 | MtrunA17_Chr5g0399561 | 33.166 | 199 | 94 | 8 | 1 | 167 | 1 | 192 | 2.26e-15 | 79.7 |
Msa1272480 | MtrunA17_Chr2g0311511 | 42.857 | 322 | 172 | 8 | 193 | 504 | 38 | 357 | 1.38e-75 | 255 |
Msa1272480 | MtrunA17_Chr2g0311511 | 34.359 | 195 | 83 | 11 | 27 | 185 | 35 | 220 | 2.18e-15 | 79.7 |
Msa1272480 | MtrunA17_Chr5g0394381 | 32.010 | 403 | 237 | 17 | 202 | 594 | 34 | 409 | 1.42e-41 | 160 |
Msa1272480 | MtrunA17_Chr4g0063701 | 31.051 | 409 | 242 | 17 | 204 | 594 | 51 | 437 | 3.88e-39 | 153 |
Msa1272480 | MtrunA17_Chr4g0063691 | 29.302 | 430 | 266 | 17 | 171 | 580 | 17 | 428 | 8.21e-32 | 131 |
Msa1272480 | MtrunA17_Chr3g0106141 | 30.504 | 377 | 236 | 11 | 196 | 565 | 24 | 381 | 9.57e-31 | 128 |
Msa1272480 | MtrunA17_Chr3g0106201 | 27.851 | 377 | 243 | 9 | 196 | 564 | 24 | 379 | 4.05e-30 | 125 |
Msa1272480 | MtrunA17_Chr0c04g0492001 | 27.384 | 409 | 263 | 15 | 192 | 587 | 27 | 414 | 1.59e-29 | 124 |
Msa1272480 | MtrunA17_Chr3g0134291 | 27.384 | 409 | 263 | 15 | 192 | 587 | 27 | 414 | 4.40e-29 | 122 |
Msa1272480 | MtrunA17_Chr0c04g0492031 | 27.384 | 409 | 263 | 15 | 192 | 587 | 27 | 414 | 4.77e-29 | 122 |
Msa1272480 | MtrunA17_Chr3g0106121 | 28.641 | 412 | 259 | 12 | 196 | 594 | 24 | 413 | 1.46e-28 | 121 |
Msa1272480 | MtrunA17_Chr3g0106131 | 28.049 | 410 | 262 | 10 | 196 | 594 | 24 | 411 | 1.59e-28 | 121 |
Msa1272480 | MtrunA17_Chr3g0106211 | 28.954 | 373 | 234 | 11 | 196 | 558 | 27 | 378 | 3.49e-28 | 120 |
Msa1272480 | MtrunA17_Chr3g0106151 | 28.358 | 402 | 241 | 14 | 207 | 594 | 38 | 406 | 1.61e-26 | 114 |
Msa1272480 | MtrunA17_Chr3g0106221 | 28.150 | 373 | 224 | 12 | 207 | 559 | 37 | 385 | 9.66e-25 | 109 |
Msa1272480 | MtrunA17_Chr7g0257821 | 27.692 | 390 | 235 | 16 | 208 | 586 | 45 | 398 | 3.72e-23 | 104 |
Msa1272480 | MtrunA17_Chr1g0202331 | 25.124 | 402 | 245 | 15 | 208 | 570 | 41 | 425 | 2.92e-22 | 101 |
Msa1272480 | MtrunA17_Chr4g0042391 | 26.923 | 364 | 228 | 13 | 207 | 558 | 40 | 377 | 1.29e-19 | 93.2 |
Msa1272480 | MtrunA17_Chr3g0106191 | 28.691 | 359 | 214 | 13 | 245 | 594 | 2 | 327 | 3.02e-19 | 92.0 |
Msa1272480 | MtrunA17_Chr4g0042351 | 26.171 | 363 | 228 | 14 | 209 | 558 | 42 | 377 | 6.56e-19 | 90.9 |
Msa1272480 | MtrunA17_Chr8g0361311 | 28.042 | 378 | 214 | 17 | 207 | 559 | 39 | 383 | 2.76e-18 | 87.8 |
Msa1272480 | MtrunA17_Chr8g0361251 | 27.676 | 383 | 209 | 17 | 207 | 559 | 39 | 383 | 1.01e-17 | 87.4 |
Msa1272480 | MtrunA17_Chr7g0237341 | 25.964 | 389 | 246 | 15 | 207 | 580 | 43 | 404 | 1.94e-17 | 86.3 |
Msa1272480 | MtrunA17_Chr7g0237331 | 25.126 | 398 | 254 | 12 | 207 | 588 | 44 | 413 | 2.40e-17 | 85.9 |
Msa1272480 | MtrunA17_Chr2g0323301 | 26.110 | 383 | 222 | 16 | 207 | 560 | 42 | 392 | 3.53e-17 | 85.5 |
Msa1272480 | MtrunA17_Chr8g0361301 | 27.056 | 377 | 220 | 15 | 207 | 560 | 40 | 384 | 5.50e-17 | 85.1 |
Msa1272480 | MtrunA17_Chr4g0053161 | 24.638 | 414 | 263 | 16 | 194 | 588 | 49 | 432 | 8.13e-17 | 84.3 |
Msa1272480 | MtrunA17_Chr3g0098791 | 23.936 | 376 | 229 | 14 | 207 | 560 | 46 | 386 | 8.83e-17 | 84.0 |
Msa1272480 | MtrunA17_Chr4g0042381 | 25.000 | 364 | 236 | 12 | 207 | 558 | 39 | 377 | 3.11e-16 | 82.4 |
Msa1272480 | MtrunA17_Chr3g0137741 | 26.902 | 368 | 220 | 18 | 206 | 564 | 52 | 379 | 3.32e-16 | 82.4 |
Msa1272480 | MtrunA17_Chr3g0084621 | 24.084 | 382 | 224 | 13 | 207 | 560 | 44 | 387 | 5.67e-16 | 81.3 |
Msa1272480 | MtrunA17_Chr7g0237351 | 23.501 | 417 | 275 | 16 | 194 | 594 | 30 | 418 | 9.43e-16 | 80.9 |
Msa1272480 | MtrunA17_Chr2g0280751 | 26.110 | 383 | 231 | 16 | 207 | 569 | 50 | 400 | 1.19e-15 | 80.9 |
Msa1272480 | MtrunA17_Chr2g0280731 | 25.984 | 381 | 233 | 15 | 207 | 569 | 46 | 395 | 3.37e-15 | 79.3 |
Msa1272480 | MtrunA17_Chr8g0361261 | 26.790 | 377 | 221 | 15 | 207 | 560 | 71 | 415 | 3.39e-15 | 79.3 |
Msa1272480 | MtrunA17_Chr2g0280701 | 25.459 | 381 | 222 | 17 | 207 | 560 | 38 | 383 | 4.33e-15 | 79.0 |
Msa1272480 | MtrunA17_Chr3g0134321 | 33.766 | 154 | 95 | 4 | 207 | 355 | 38 | 189 | 4.94e-15 | 78.6 |
Msa1272480 | MtrunA17_Chr4g0023071 | 23.636 | 385 | 237 | 14 | 207 | 563 | 42 | 397 | 8.78e-15 | 77.8 |
Msa1272480 | MtrunA17_Chr2g0280681 | 24.934 | 377 | 222 | 16 | 207 | 558 | 43 | 383 | 8.88e-15 | 77.8 |
Msa1272480 | MtrunA17_Chr3g0084651 | 23.747 | 379 | 228 | 14 | 207 | 558 | 41 | 385 | 9.31e-15 | 77.0 |
Msa1272480 | MtrunA17_Chr3g0093161 | 24.074 | 378 | 254 | 12 | 195 | 560 | 25 | 381 | 9.61e-15 | 77.8 |
Msa1272480 | MtrunA17_Chr8g0361441 | 24.796 | 367 | 243 | 12 | 207 | 560 | 42 | 388 | 1.79e-14 | 77.0 |
Msa1272480 | MtrunA17_Chr2g0280841 | 23.786 | 412 | 255 | 17 | 214 | 593 | 53 | 437 | 2.35e-14 | 75.5 |
Msa1272480 | MtrunA17_Chr3g0084681 | 25.000 | 372 | 233 | 15 | 207 | 560 | 44 | 387 | 2.90e-14 | 76.3 |
Msa1272480 | MtrunA17_Chr4g0048581 | 21.447 | 387 | 263 | 13 | 207 | 574 | 47 | 411 | 3.63e-14 | 75.9 |
Msa1272480 | MtrunA17_Chr3g0084491 | 25.876 | 371 | 230 | 15 | 207 | 560 | 57 | 399 | 5.14e-14 | 75.5 |
Msa1272480 | MtrunA17_Chr2g0280801 | 24.350 | 423 | 251 | 18 | 208 | 592 | 45 | 436 | 6.14e-14 | 75.1 |
Msa1272480 | MtrunA17_Chr2g0318811 | 26.260 | 377 | 220 | 16 | 207 | 560 | 38 | 379 | 8.66e-14 | 74.7 |
Msa1272480 | MtrunA17_Chr1g0149381 | 27.851 | 377 | 205 | 20 | 206 | 564 | 57 | 384 | 3.57e-13 | 72.8 |
Msa1272480 | MtrunA17_Chr7g0236201 | 23.641 | 423 | 253 | 20 | 207 | 592 | 44 | 433 | 4.76e-13 | 72.4 |
Msa1272480 | MtrunA17_Chr4g0048691 | 25.610 | 410 | 211 | 13 | 207 | 568 | 61 | 424 | 5.48e-13 | 71.6 |
Msa1272480 | MtrunA17_Chr2g0280691 | 25.964 | 389 | 233 | 18 | 195 | 560 | 27 | 383 | 5.60e-13 | 72.0 |
Msa1272480 | MtrunA17_Chr7g0236161 | 23.641 | 423 | 253 | 20 | 207 | 592 | 44 | 433 | 6.12e-13 | 72.0 |
Msa1272480 | MtrunA17_Chr7g0236121 | 23.641 | 423 | 253 | 20 | 207 | 592 | 44 | 433 | 6.25e-13 | 72.0 |
Msa1272480 | MtrunA17_Chr4g0042361 | 23.947 | 380 | 235 | 15 | 207 | 560 | 74 | 425 | 8.48e-13 | 71.6 |
Msa1272480 | MtrunA17_Chr8g0361431 | 26.582 | 316 | 194 | 14 | 207 | 511 | 52 | 340 | 9.59e-13 | 71.2 |
Msa1272480 | MtrunA17_Chr3g0084431 | 23.360 | 381 | 222 | 16 | 207 | 560 | 44 | 381 | 1.24e-12 | 70.9 |
Msa1272480 | MtrunA17_Chr2g0314611 | 25.538 | 372 | 217 | 18 | 206 | 563 | 55 | 380 | 1.39e-12 | 70.9 |
Msa1272480 | MtrunA17_Chr2g0318841 | 23.925 | 372 | 235 | 14 | 207 | 560 | 38 | 379 | 1.39e-12 | 70.9 |
Msa1272480 | MtrunA17_Chr2g0318831 | 38.849 | 139 | 69 | 6 | 207 | 338 | 41 | 170 | 1.48e-12 | 70.9 |
Msa1272480 | MtrunA17_Chr2g0323241 | 32.203 | 177 | 107 | 6 | 193 | 359 | 27 | 200 | 1.86e-12 | 69.7 |
Msa1272480 | MtrunA17_Chr2g0280791 | 24.074 | 378 | 242 | 13 | 214 | 569 | 47 | 401 | 2.34e-12 | 70.1 |
Msa1272480 | MtrunA17_Chr3g0078531 | 25.459 | 381 | 230 | 16 | 207 | 558 | 52 | 407 | 2.41e-12 | 70.1 |
Msa1272480 | MtrunA17_Chr7g0236641 | 22.596 | 416 | 262 | 19 | 207 | 592 | 42 | 427 | 3.32e-12 | 69.7 |
Msa1272480 | MtrunA17_Chr2g0333091 | 25.547 | 411 | 235 | 19 | 206 | 594 | 50 | 411 | 3.78e-12 | 69.3 |
Msa1272480 | MtrunA17_Chr3g0078541 | 25.722 | 381 | 228 | 18 | 207 | 558 | 52 | 406 | 4.16e-12 | 69.3 |
Msa1272480 | MtrunA17_Chr1g0205551 | 29.932 | 147 | 89 | 6 | 289 | 430 | 1 | 138 | 5.56e-12 | 63.5 |
Msa1272480 | MtrunA17_Chr4g0042341 | 23.467 | 375 | 246 | 12 | 207 | 560 | 39 | 393 | 3.49e-11 | 66.2 |
Msa1272480 | MtrunA17_Chr3g0106161 | 30.556 | 144 | 85 | 2 | 421 | 564 | 90 | 218 | 3.68e-11 | 66.2 |
Msa1272480 | MtrunA17_Chr3g0084451 | 23.947 | 380 | 224 | 16 | 207 | 560 | 44 | 384 | 3.91e-11 | 66.2 |
Msa1272480 | MtrunA17_Chr2g0318171 | 25.337 | 371 | 222 | 18 | 204 | 564 | 53 | 378 | 5.49e-11 | 65.9 |
Msa1272480 | MtrunA17_Chr8g0340071 | 29.139 | 151 | 96 | 4 | 207 | 348 | 44 | 192 | 7.08e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272480 | AT5G24080.2 | 27.361 | 413 | 252 | 20 | 193 | 573 | 32 | 428 | 7.57e-25 | 110 |
Msa1272480 | AT3G12000.1 | 26.702 | 382 | 237 | 13 | 198 | 559 | 40 | 398 | 1.69e-17 | 85.9 |
Msa1272480 | AT1G11330.3 | 25.765 | 392 | 248 | 15 | 200 | 569 | 40 | 410 | 3.01e-16 | 82.8 |
Msa1272480 | AT1G11330.2 | 25.765 | 392 | 248 | 15 | 200 | 569 | 40 | 410 | 3.51e-16 | 82.8 |
Msa1272480 | AT1G11330.1 | 25.765 | 392 | 248 | 15 | 200 | 569 | 40 | 410 | 3.66e-16 | 82.8 |
Msa1272480 | AT1G65790.3 | 24.603 | 378 | 234 | 11 | 202 | 560 | 39 | 384 | 1.66e-15 | 80.5 |
Msa1272480 | AT1G65790.2 | 24.603 | 378 | 234 | 11 | 202 | 560 | 39 | 384 | 1.66e-15 | 80.5 |
Msa1272480 | AT4G21390.2 | 25.061 | 407 | 250 | 15 | 194 | 574 | 32 | 409 | 1.72e-15 | 80.5 |
Msa1272480 | AT1G65790.1 | 24.603 | 378 | 234 | 11 | 202 | 560 | 39 | 384 | 2.12e-15 | 80.5 |
Msa1272480 | AT4G21390.1 | 25.061 | 407 | 250 | 15 | 194 | 574 | 32 | 409 | 2.42e-15 | 80.1 |
Msa1272480 | AT1G11340.1 | 27.297 | 381 | 213 | 16 | 207 | 558 | 34 | 379 | 3.00e-15 | 79.7 |
Msa1272480 | AT1G11340.3 | 27.297 | 381 | 213 | 16 | 207 | 558 | 102 | 447 | 3.08e-15 | 79.7 |
Msa1272480 | AT1G11340.2 | 27.297 | 381 | 213 | 16 | 207 | 558 | 102 | 447 | 3.21e-15 | 79.7 |
Msa1272480 | AT2G41890.1 | 27.346 | 373 | 221 | 15 | 208 | 563 | 41 | 380 | 4.30e-15 | 79.3 |
Msa1272480 | AT1G34300.1 | 24.165 | 389 | 249 | 17 | 192 | 573 | 28 | 377 | 1.40e-14 | 77.8 |
Msa1272480 | AT1G11300.2 | 24.623 | 398 | 246 | 16 | 197 | 569 | 32 | 400 | 1.59e-14 | 77.4 |
Msa1272480 | AT1G11300.1 | 24.623 | 398 | 246 | 16 | 197 | 569 | 32 | 400 | 1.62e-14 | 77.4 |
Msa1272480 | AT1G61360.1 | 23.971 | 413 | 246 | 18 | 197 | 574 | 19 | 398 | 2.14e-14 | 77.0 |
Msa1272480 | AT1G11280.5 | 24.350 | 423 | 231 | 18 | 197 | 574 | 27 | 405 | 2.36e-14 | 76.6 |
Msa1272480 | AT1G11280.2 | 24.350 | 423 | 231 | 18 | 197 | 574 | 27 | 405 | 2.78e-14 | 76.6 |
Msa1272480 | AT1G11280.3 | 24.350 | 423 | 231 | 18 | 197 | 574 | 27 | 405 | 2.83e-14 | 76.6 |
Msa1272480 | AT1G11280.1 | 24.350 | 423 | 231 | 18 | 197 | 574 | 37 | 415 | 3.33e-14 | 76.6 |
Msa1272480 | AT1G11280.4 | 24.350 | 423 | 231 | 18 | 197 | 574 | 37 | 415 | 3.33e-14 | 76.6 |
Msa1272480 | AT1G11303.1 | 24.505 | 404 | 251 | 17 | 197 | 574 | 32 | 407 | 1.33e-13 | 74.7 |
Msa1272480 | AT1G11410.1 | 24.595 | 370 | 237 | 16 | 207 | 558 | 37 | 382 | 3.66e-13 | 73.2 |
Msa1272480 | AT1G11410.3 | 24.595 | 370 | 237 | 16 | 207 | 558 | 13 | 358 | 3.83e-13 | 73.2 |
Msa1272480 | AT1G11410.4 | 24.595 | 370 | 237 | 16 | 207 | 558 | 44 | 389 | 4.11e-13 | 73.2 |
Msa1272480 | AT1G61380.1 | 23.155 | 393 | 249 | 17 | 207 | 574 | 35 | 399 | 2.69e-12 | 70.5 |
Msa1272480 | AT1G61400.1 | 24.541 | 436 | 272 | 16 | 166 | 574 | 1 | 406 | 6.37e-12 | 69.3 |
Msa1272480 | AT1G78850.1 | 23.607 | 377 | 247 | 15 | 217 | 570 | 52 | 410 | 7.54e-12 | 68.2 |
Msa1272480 | AT1G61400.2 | 24.541 | 436 | 272 | 16 | 166 | 574 | 1 | 406 | 8.08e-12 | 68.9 |
Msa1272480 | AT1G61550.1 | 23.775 | 408 | 249 | 18 | 196 | 574 | 17 | 391 | 8.40e-12 | 68.9 |
Msa1272480 | AT4G21380.2 | 22.849 | 372 | 242 | 12 | 207 | 560 | 46 | 390 | 1.13e-11 | 68.2 |
Msa1272480 | AT1G78860.1 | 24.118 | 340 | 228 | 14 | 242 | 570 | 90 | 410 | 1.58e-11 | 67.0 |
Msa1272480 | AT1G11350.1 | 26.014 | 419 | 219 | 20 | 196 | 569 | 26 | 398 | 1.63e-11 | 67.8 |
Msa1272480 | AT1G16905.1 | 23.647 | 351 | 205 | 14 | 242 | 570 | 89 | 398 | 2.15e-11 | 66.6 |
Msa1272480 | AT1G65800.2 | 23.377 | 385 | 252 | 12 | 193 | 560 | 30 | 388 | 2.47e-11 | 67.0 |
Msa1272480 | AT4G21380.1 | 22.849 | 372 | 242 | 12 | 207 | 560 | 46 | 390 | 2.84e-11 | 67.0 |
Msa1272480 | AT1G65800.1 | 23.136 | 389 | 248 | 13 | 193 | 560 | 30 | 388 | 3.15e-11 | 67.0 |
Msa1272480 | AT2G19130.1 | 25.000 | 400 | 232 | 19 | 207 | 574 | 38 | 401 | 5.00e-11 | 66.2 |
Msa1272480 | AT4G03230.8 | 23.729 | 413 | 258 | 18 | 207 | 594 | 44 | 424 | 6.12e-11 | 65.9 |
Msa1272480 | AT4G03230.4 | 23.729 | 413 | 258 | 18 | 207 | 594 | 44 | 424 | 8.61e-11 | 65.5 |
Msa1272480 | AT4G03230.1 | 23.729 | 413 | 258 | 18 | 207 | 594 | 44 | 424 | 8.61e-11 | 65.5 |
Find 120 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTGGTTGCTTTCACCTTC+TGG | 0.127016 | 8_3:-6148521 | Msa1272480:CDS |
TAACTTCCCCAAATGGTTTC+AGG | 0.200357 | 8_3:-6148334 | Msa1272480:CDS |
CCCCAAATGGTTTCAGGTTA+TGG | 0.203552 | 8_3:-6148328 | Msa1272480:CDS |
CTACACTGCTCTTCAGTAAA+AGG | 0.260924 | 8_3:+6147510 | None:intergenic |
ACCAATGGCTATAGTACTTT+TGG | 0.271121 | 8_3:+6150473 | None:intergenic |
AGTATAAGTACATATATTAA+AGG | 0.280779 | 8_3:+6147779 | None:intergenic |
CCTTCTGGTGACTTTGCCTT+TGG | 0.284286 | 8_3:-6148506 | Msa1272480:CDS |
TCAATCAGTGAGTAATGTTT+TGG | 0.296727 | 8_3:+6147678 | None:intergenic |
CCTTCTCAAGTTGTGGATAA+AGG | 0.297314 | 8_3:-6148179 | Msa1272480:CDS |
GAGACAGTCCTGCACCAAAA+AGG | 0.306629 | 8_3:-6150293 | Msa1272480:CDS |
TCCATAACCTGAAACCATTT+GGG | 0.319339 | 8_3:+6148327 | None:intergenic |
AAAGCTTTCTTCAAGGCTTA+AGG | 0.324891 | 8_3:-6148153 | Msa1272480:CDS |
TGGAAGACTTTCAAGTTTCC+TGG | 0.332297 | 8_3:-6150112 | Msa1272480:intron |
TATAATAGCTTCTGCACTTT+GGG | 0.334674 | 8_3:-6147729 | Msa1272480:CDS |
TTCCATAACCTGAAACCATT+TGG | 0.336453 | 8_3:+6148326 | None:intergenic |
CAGCTGCCATATGGATCATT+AGG | 0.345935 | 8_3:+6147654 | None:intergenic |
GCACATCCTTGTATGAAATC+TGG | 0.361226 | 8_3:+6147627 | None:intergenic |
TTCCATAGCATGTCACCATT+TGG | 0.369317 | 8_3:+6150224 | None:intergenic |
CACAAACCAACACCTCTTCA+TGG | 0.374974 | 8_3:-6150437 | Msa1272480:CDS |
CACAACTTGAGAAGGCAATA+AGG | 0.378374 | 8_3:+6148187 | None:intergenic |
TTCACTCTTAGTTGAACTCT+TGG | 0.381457 | 8_3:+6147827 | None:intergenic |
CAATTGGTCTTCGACAAATC+AGG | 0.388787 | 8_3:-6147981 | Msa1272480:CDS |
TGACACCTTGTTGTCTTCTC+AGG | 0.398124 | 8_3:-6150089 | Msa1272480:CDS |
AAGAAGTTACCACTCTCAAA+TGG | 0.410332 | 8_3:-6147420 | Msa1272480:CDS |
GTGAAACTCATTGCCAATGA+TGG | 0.410493 | 8_3:-6150263 | Msa1272480:CDS |
AGCCCGCACCAGCCCATCAT+TGG | 0.412723 | 8_3:+6150250 | None:intergenic |
AAGGAAGAAAGCTTTCTTCA+AGG | 0.414940 | 8_3:-6148160 | Msa1272480:CDS |
ATCCTCAAGCACAAAGTTGC+CGG | 0.417463 | 8_3:+6148256 | None:intergenic |
ATCAAGTGCTGGAGCTCAAT+TGG | 0.420184 | 8_3:-6147997 | Msa1272480:CDS |
AGAGTTGATGCAACTCTTAA+TGG | 0.425621 | 8_3:-6147396 | Msa1272480:CDS |
TCAGGTTAGGAGATAGTTGT+TGG | 0.432263 | 8_3:-6147446 | Msa1272480:CDS |
TTTCTGAGAAAACTGTTGTA+TGG | 0.432600 | 8_3:-6148427 | Msa1272480:CDS |
CATTCTATTAATCTACCATC+TGG | 0.438207 | 8_3:-6148068 | Msa1272480:CDS |
CTGGTGCGGGCTTCTCCAAA+TGG | 0.438443 | 8_3:-6150239 | Msa1272480:CDS |
TTGGTGCTAACTTCCCCAAA+TGG | 0.439852 | 8_3:-6148341 | Msa1272480:CDS |
TCTGGCTTGCAGCTGCCATA+TGG | 0.441887 | 8_3:+6147645 | None:intergenic |
AGCTCCAGCACTTGATGTAC+TGG | 0.446907 | 8_3:+6148004 | None:intergenic |
GAGCTCTTTCTGCAAAATGA+TGG | 0.453488 | 8_3:-6150022 | Msa1272480:CDS |
GTGGAACTCACTGCCAATGA+TGG | 0.454151 | 8_3:-6148365 | Msa1272480:CDS |
CTCCAAATGGTGACATGCTA+TGG | 0.454917 | 8_3:-6150226 | Msa1272480:CDS |
GAATCAGTGAGTAGAGGAGA+AGG | 0.455286 | 8_3:+6150523 | None:intergenic |
CCAAAAGTACTATAGCCATT+TGG | 0.457102 | 8_3:-6148575 | Msa1272480:intron |
CTTATTGCCTTCTCAAGTTG+TGG | 0.458043 | 8_3:-6148186 | Msa1272480:CDS |
AAAGAGACAAATTTCAGTAA+AGG | 0.460569 | 8_3:-6150052 | Msa1272480:CDS |
AGAAATGTTTGCATACCAAA+TGG | 0.463887 | 8_3:+6150344 | None:intergenic |
TCACTCTTAGTTGAACTCTT+GGG | 0.472450 | 8_3:+6147828 | None:intergenic |
ATCAGTGAGTAGAGGAGAAG+GGG | 0.473970 | 8_3:+6150525 | None:intergenic |
ATTGATCCTAATGATCCATA+TGG | 0.477623 | 8_3:-6147660 | Msa1272480:CDS |
ACTGTTGTATGGTATGCTAA+TGG | 0.478468 | 8_3:-6148416 | Msa1272480:CDS |
TTGCCAATGATGGGCTGGTG+CGG | 0.480335 | 8_3:-6150253 | Msa1272480:CDS |
AAGGAGACAGATTTCAGTAA+AGG | 0.482797 | 8_3:-6148134 | Msa1272480:CDS |
TACTTTGAAAGTAATACTGT+TGG | 0.483409 | 8_3:-6148029 | Msa1272480:CDS |
AATCAGTGAGTAGAGGAGAA+GGG | 0.485968 | 8_3:+6150524 | None:intergenic |
ATATAATAGCTTCTGCACTT+TGG | 0.487312 | 8_3:-6147730 | Msa1272480:CDS |
GTATAAGTACATATATTAAA+GGG | 0.488197 | 8_3:+6147780 | None:intergenic |
TCACACTTTCAAGAAAGCCT+TGG | 0.489630 | 8_3:+6147371 | None:intergenic |
TGCCAATGATGGGCTGGTGC+GGG | 0.489933 | 8_3:-6150252 | Msa1272480:CDS |
CCTTTATCCACAACTTGAGA+AGG | 0.492964 | 8_3:+6148179 | None:intergenic |
AAGCAACCAGGGAGAGGTGC+TGG | 0.494842 | 8_3:+6148532 | None:intergenic |
AGTTAGCACCAACCCATCAT+TGG | 0.498106 | 8_3:+6148352 | None:intergenic |
GAGGAGAAGGGGAAGTAGAG+AGG | 0.502798 | 8_3:+6150536 | None:intergenic |
GCAGTGTAGGAAATCTTGTA+TGG | 0.504417 | 8_3:-6147496 | Msa1272480:CDS |
TGTCTTCTCAGGTTGTTGAA+AGG | 0.505216 | 8_3:-6150078 | Msa1272480:CDS |
GGATGATTGTTTGTGTTCTG+TGG | 0.510059 | 8_3:-6147475 | Msa1272480:CDS |
ACCAGAAGGTGAAAGCAACC+AGG | 0.514206 | 8_3:+6148520 | None:intergenic |
AGTGCAGGTAGTGGTGTTTG+TGG | 0.518931 | 8_3:-6147753 | Msa1272480:CDS |
AGAAGTTACCACTCTCAAAT+GGG | 0.519368 | 8_3:-6147419 | Msa1272480:CDS |
CTATGGAATACTGAGGGACT+CGG | 0.522040 | 8_3:-6150209 | Msa1272480:CDS |
TATCAGATTATGTGCTTCAA+AGG | 0.523234 | 8_3:-6147533 | Msa1272480:CDS |
AGACAAATTTCAGTAAAGGA+AGG | 0.535382 | 8_3:-6150048 | Msa1272480:CDS |
GCAGTAAAAGAATCACCAAA+TGG | 0.536164 | 8_3:+6148560 | None:intergenic |
TGAAGCACATAATCTGATAG+AGG | 0.536988 | 8_3:+6147537 | None:intergenic |
CACAAACCAGCACCTCTCCC+TGG | 0.537716 | 8_3:-6148538 | Msa1272480:CDS |
GGCAACTTTGTGCTTGAGGA+TGG | 0.540807 | 8_3:-6148254 | Msa1272480:CDS |
AGACAGATTTCAGTAAAGGA+AGG | 0.543432 | 8_3:-6148130 | Msa1272480:CDS |
ACCAAAAGTACTATAGCCAT+TGG | 0.547841 | 8_3:-6150474 | Msa1272480:CDS |
GGATCCAGTACATCAAGTGC+TGG | 0.549542 | 8_3:-6148008 | Msa1272480:CDS |
GGAGACAGTCCTGCACCAAA+AGG | 0.549672 | 8_3:-6148395 | Msa1272480:CDS |
TGCAAGCCAGATTTCATACA+AGG | 0.550125 | 8_3:-6147633 | Msa1272480:CDS |
GGTTTGAGATACAACACTGA+TGG | 0.550298 | 8_3:+6150494 | None:intergenic |
ACTCATTGCCAATGATGGGC+TGG | 0.554094 | 8_3:-6150258 | Msa1272480:CDS |
AGGTGAAAGCAACCAGGGAG+AGG | 0.559710 | 8_3:+6148526 | None:intergenic |
TGCACCAAAAGGATCAAAAG+TGG | 0.563251 | 8_3:-6148384 | Msa1272480:CDS |
TGCAACTCTTAATGGTGCCA+AGG | 0.565874 | 8_3:-6147388 | Msa1272480:CDS |
TATACTGTTAGTGCAGGTAG+TGG | 0.565930 | 8_3:-6147762 | Msa1272480:CDS |
AAAAGATTAGTGTCTTTGAG+TGG | 0.569176 | 8_3:+6148476 | None:intergenic |
AAACAACCATGAAGAGGTGT+TGG | 0.569836 | 8_3:+6150431 | None:intergenic |
ATGGTAAATTCAACAGTCTG+TGG | 0.569947 | 8_3:-6148235 | Msa1272480:CDS |
CACCGGCAACTTTGTGCTTG+AGG | 0.577386 | 8_3:-6148258 | Msa1272480:CDS |
TGTACTTATACTGTTAGTGC+AGG | 0.578443 | 8_3:-6147768 | Msa1272480:CDS |
TTCAGGTTATGGAATACTGA+AGG | 0.580702 | 8_3:-6148317 | Msa1272480:CDS |
CTCGGTGATAGAGTTTCTCA+TGG | 0.582184 | 8_3:-6150191 | Msa1272480:CDS |
CTATGAAAGTGTAAAACTGT+GGG | 0.582617 | 8_3:-6149939 | Msa1272480:CDS |
GAAGACAACAAGGTGTCACC+AGG | 0.583450 | 8_3:+6150094 | None:intergenic |
ATTGAAGAATCAGTGAGTAG+AGG | 0.587377 | 8_3:+6150517 | None:intergenic |
CGCGGTGTGTTGAATGACAC+CGG | 0.587935 | 8_3:-6148275 | Msa1272480:CDS |
TGGTAAATTCAACAGTCTGT+GGG | 0.591832 | 8_3:-6148234 | Msa1272480:CDS |
AATTGGTCTTCGACAAATCA+GGG | 0.593181 | 8_3:-6147980 | Msa1272480:CDS |
TGAAACTCATTGCCAATGAT+GGG | 0.597309 | 8_3:-6150262 | Msa1272480:CDS |
GAAGGCAATAAGGTGTCACT+AGG | 0.602021 | 8_3:+6148197 | None:intergenic |
ACTCACTGCCAATGATGGGT+TGG | 0.610259 | 8_3:-6148360 | Msa1272480:CDS |
CATGGTGTGTTCAATGACAC+AGG | 0.612301 | 8_3:-6150173 | Msa1272480:CDS |
AAGAGTTCAACTAAGAGTGA+AGG | 0.616078 | 8_3:-6147825 | Msa1272480:CDS |
ACTATGAAAGTGTAAAACTG+TGG | 0.618208 | 8_3:-6149940 | Msa1272480:CDS |
GTTCAACTAAGAGTGAAGGT+TGG | 0.619862 | 8_3:-6147821 | Msa1272480:CDS |
CTCAATGTTAAAGTTTCTCG+CGG | 0.620103 | 8_3:-6148293 | Msa1272480:CDS |
TGCAGTAAAAGAATCACCAA+TGG | 0.627896 | 8_3:+6150458 | None:intergenic |
TGGAACTCACTGCCAATGAT+GGG | 0.629211 | 8_3:-6148364 | Msa1272480:CDS |
CCAAAGGCAAAGTCACCAGA+AGG | 0.636933 | 8_3:+6148506 | None:intergenic |
AGGTGAAAACAACCATGAAG+AGG | 0.638776 | 8_3:+6150425 | None:intergenic |
CCATAACCTGAAACCATTTG+GGG | 0.645472 | 8_3:+6148328 | None:intergenic |
TTTGAGTGGAAGAAAACCAA+AGG | 0.654690 | 8_3:+6148490 | None:intergenic |
CCAGAAGGTGAAAGCAACCA+GGG | 0.656880 | 8_3:+6148521 | None:intergenic |
TGCTCTAAGATAAAATTGTG+TGG | 0.657315 | 8_3:+6147890 | None:intergenic |
TCAACTCTCCCATTTGAGAG+TGG | 0.665246 | 8_3:+6147411 | None:intergenic |
CCTAACGAAAAGTCACCAGA+AGG | 0.667148 | 8_3:+6150405 | None:intergenic |
GACATGCTATGGAATACTGA+GGG | 0.685745 | 8_3:-6150215 | Msa1272480:CDS |
AACAACCTGAGAAGACAACA+AGG | 0.709761 | 8_3:+6150084 | None:intergenic |
AAAGGGCTTAGACGATACTG+TGG | 0.721635 | 8_3:+6147797 | None:intergenic |
TGACATGCTATGGAATACTG+AGG | 0.750915 | 8_3:-6150216 | Msa1272480:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATCTATAAAATCATA+TGG | - | chr8_3:6149156-6149175 | Msa1272480:intron | 10.0% |
!! | CAAAACTAAAATAACATATA+TGG | + | chr8_3:6148379-6148398 | None:intergenic | 15.0% |
!! | AAAAATAATAAACATATAGC+TGG | - | chr8_3:6148935-6148954 | Msa1272480:intron | 15.0% |
!!! | CTTTTATTTTCTATGAAAAA+TGG | - | chr8_3:6149027-6149046 | Msa1272480:intron | 15.0% |
!! | GTATAAGTACATATATTAAA+GGG | + | chr8_3:6150137-6150156 | None:intergenic | 15.0% |
!! | AGTATAAGTACATATATTAA+AGG | + | chr8_3:6150138-6150157 | None:intergenic | 15.0% |
!!! | TTTTCATTAACATAACGAAA+TGG | + | chr8_3:6147946-6147965 | None:intergenic | 20.0% |
!!! | TGATTATTGAATATGTTTTC+AGG | + | chr8_3:6148645-6148664 | None:intergenic | 20.0% |
!!! | ATCAACTTTTTAACTATCTT+AGG | + | chr8_3:6148731-6148750 | None:intergenic | 20.0% |
!! | ATTAGATAAATATTCCTGTT+TGG | - | chr8_3:6148880-6148899 | Msa1272480:intron | 20.0% |
!!! | ATACATTACAATTTTGACAT+AGG | + | chr8_3:6149002-6149021 | None:intergenic | 20.0% |
!! | TGTTTCCTATAAAAATCATA+TGG | - | chr8_3:6149221-6149240 | Msa1272480:intron | 20.0% |
!!! | TTGATCCATATGATTTTTAT+AGG | + | chr8_3:6149229-6149248 | None:intergenic | 20.0% |
!!! | ATCTTTTATTGCTTTCTATT+TGG | - | chr8_3:6149454-6149473 | Msa1272480:intron | 20.0% |
!!! | TGTTTTTTTTGCTTTCCATT+TGG | - | chr8_3:6147555-6147574 | Msa1272480:CDS | 25.0% |
! | TTCTGATAAAAAATGTTCTG+CGG | - | chr8_3:6147589-6147608 | Msa1272480:CDS | 25.0% |
! | AAAGAGACAAATTTCAGTAA+AGG | - | chr8_3:6147862-6147881 | Msa1272480:CDS | 25.0% |
! | TGGTGATAATATCTGTAAAA+GGG | + | chr8_3:6148359-6148378 | None:intergenic | 25.0% |
! | ATGGTGATAATATCTGTAAA+AGG | + | chr8_3:6148360-6148379 | None:intergenic | 25.0% |
! | TAACAGACAAAATTAGTGAA+CGG | - | chr8_3:6148474-6148493 | Msa1272480:CDS | 25.0% |
!!! | TCTTAGGTTATAGTTTTACA+GGG | + | chr8_3:6148715-6148734 | None:intergenic | 25.0% |
!!! | ATCTTAGGTTATAGTTTTAC+AGG | + | chr8_3:6148716-6148735 | None:intergenic | 25.0% |
!!! | AAAGTTGATAACAAAAAGAG+AGG | - | chr8_3:6148742-6148761 | Msa1272480:intron | 25.0% |
! | ATTGATGTTAACATGAGTAT+TGG | + | chr8_3:6148819-6148838 | None:intergenic | 25.0% |
!! | ACTAAGTGCTTTAAATTTGA+TGG | - | chr8_3:6149126-6149145 | Msa1272480:intron | 25.0% |
!!! | AAATCACTAGTCTTTCAATT+TGG | + | chr8_3:6149183-6149202 | None:intergenic | 25.0% |
!! | ACAGTTTTCTCAGAAATTTT+GGG | + | chr8_3:6149483-6149502 | None:intergenic | 25.0% |
!! | AACAGTTTTCTCAGAAATTT+TGG | + | chr8_3:6149484-6149503 | None:intergenic | 25.0% |
!! | TTTTCATTAACATAACCAGA+TGG | + | chr8_3:6149864-6149883 | None:intergenic | 25.0% |
!! | TACTTTGAAAGTAATACTGT+TGG | - | chr8_3:6149885-6149904 | Msa1272480:intron | 25.0% |
!! | AGATCATTTCTCTTTTTACT+TGG | + | chr8_3:6150323-6150342 | None:intergenic | 25.0% |
AAAAACATCGTATCTTCTAG+TGG | + | chr8_3:6147542-6147561 | None:intergenic | 30.0% | |
AGAAATGTTTGCATACCAAA+TGG | + | chr8_3:6147573-6147592 | None:intergenic | 30.0% | |
AGACAAATTTCAGTAAAGGA+AGG | - | chr8_3:6147866-6147885 | Msa1272480:CDS | 30.0% | |
! | ACTATGAAAGTGTAAAACTG+TGG | - | chr8_3:6147974-6147993 | Msa1272480:CDS | 30.0% |
! | CTATGAAAGTGTAAAACTGT+GGG | - | chr8_3:6147975-6147994 | Msa1272480:CDS | 30.0% |
!! | AATTAGTCTTTGACAGATCA+GGG | - | chr8_3:6148024-6148043 | Msa1272480:CDS | 30.0% |
GAACATGAAATAACATGTGT+TGG | + | chr8_3:6148136-6148155 | None:intergenic | 30.0% | |
ACATAGATAAGATACGGAAA+CGG | + | chr8_3:6148190-6148209 | None:intergenic | 30.0% | |
TTTCCGTATCTTATCTATGT+CGG | - | chr8_3:6148190-6148209 | Msa1272480:CDS | 30.0% | |
! | CTTGAGAAGAGTATATAAAG+AGG | - | chr8_3:6148256-6148275 | Msa1272480:CDS | 30.0% |
! | AATTACCTATTTTGTGTGCT+GGG | + | chr8_3:6148537-6148556 | None:intergenic | 30.0% |
! | TAATTACCTATTTTGTGTGC+TGG | + | chr8_3:6148538-6148557 | None:intergenic | 30.0% |
AGCACACAAAATAGGTAATT+AGG | - | chr8_3:6148537-6148556 | Msa1272480:CDS | 30.0% | |
AAGAGAGGAATTTGTAGATA+TGG | - | chr8_3:6148757-6148776 | Msa1272480:intron | 30.0% | |
TAGATATGGTTACCTGAATT+CGG | - | chr8_3:6148771-6148790 | Msa1272480:intron | 30.0% | |
TACGAATTATAGTTCCAAAC+AGG | + | chr8_3:6148897-6148916 | None:intergenic | 30.0% | |
CTAAAAATCAACACACAAGT+TGG | + | chr8_3:6149088-6149107 | None:intergenic | 30.0% | |
! | TGAAAGACTAGTGATTTTGA+TGG | - | chr8_3:6149186-6149205 | Msa1272480:intron | 30.0% |
AGGAAGACATGTTTATAATG+TGG | + | chr8_3:6149259-6149278 | None:intergenic | 30.0% | |
AAAAGATTAGTGTCTTTGAG+TGG | + | chr8_3:6149441-6149460 | None:intergenic | 30.0% | |
! | TTTCTGAGAAAACTGTTGTA+TGG | - | chr8_3:6149487-6149506 | Msa1272480:intron | 30.0% |
!!! | GAACTTGTTTTACAAAGTGA+TGG | - | chr8_3:6149810-6149829 | Msa1272480:intron | 30.0% |
CATTCTATTAATCTACCATC+TGG | - | chr8_3:6149846-6149865 | Msa1272480:intron | 30.0% | |
!! | TGCTCTAAGATAAAATTGTG+TGG | + | chr8_3:6150027-6150046 | None:intergenic | 30.0% |
! | AGAGCAACTCTTAATTTTGA+TGG | - | chr8_3:6150041-6150060 | Msa1272480:CDS | 30.0% |
ATATAATAGCTTCTGCACTT+TGG | - | chr8_3:6150184-6150203 | Msa1272480:CDS | 30.0% | |
TATAATAGCTTCTGCACTTT+GGG | - | chr8_3:6150185-6150204 | Msa1272480:CDS | 30.0% | |
! | TCAATCAGTGAGTAATGTTT+TGG | + | chr8_3:6150239-6150258 | None:intergenic | 30.0% |
ATTGATCCTAATGATCCATA+TGG | - | chr8_3:6150254-6150273 | Msa1272480:CDS | 30.0% | |
!!! | AGATTTTGATTGACACTGAT+TGG | - | chr8_3:6150354-6150373 | Msa1272480:CDS | 30.0% |
TATCAGATTATGTGCTTCAA+AGG | - | chr8_3:6150381-6150400 | Msa1272480:CDS | 30.0% | |
ATTGAAGAATCAGTGAGTAG+AGG | + | chr8_3:6147400-6147419 | None:intergenic | 35.0% | |
!! | ACCAAAAGTACTATAGCCAT+TGG | - | chr8_3:6147440-6147459 | Msa1272480:CDS | 35.0% |
! | ACCAATGGCTATAGTACTTT+TGG | + | chr8_3:6147444-6147463 | None:intergenic | 35.0% |
TGCAGTAAAAGAATCACCAA+TGG | + | chr8_3:6147459-6147478 | None:intergenic | 35.0% | |
!! | GTTTCACTTTTGACCCTTTT+TGG | + | chr8_3:6147638-6147657 | None:intergenic | 35.0% |
TGAAACTCATTGCCAATGAT+GGG | - | chr8_3:6147652-6147671 | Msa1272480:CDS | 35.0% | |
!! | CAATTAGTCTTTGACAGATC+AGG | - | chr8_3:6148023-6148042 | Msa1272480:CDS | 35.0% |
!! | ATCAGGGTACTTGTATGTTT+TGG | - | chr8_3:6148040-6148059 | Msa1272480:CDS | 35.0% |
!! | TCAGGGTACTTGTATGTTTT+GGG | - | chr8_3:6148041-6148060 | Msa1272480:CDS | 35.0% |
TATAACATGTGTCAACCTGT+CGG | - | chr8_3:6148162-6148181 | Msa1272480:CDS | 35.0% | |
ACACCGACATAGATAAGATA+CGG | + | chr8_3:6148196-6148215 | None:intergenic | 35.0% | |
TCTTATCTATGTCGGTGTAT+TGG | - | chr8_3:6148198-6148217 | Msa1272480:CDS | 35.0% | |
CTTATCTATGTCGGTGTATT+GGG | - | chr8_3:6148199-6148218 | Msa1272480:CDS | 35.0% | |
CTAACTCAACCTTACAAAAC+CGG | + | chr8_3:6148303-6148322 | None:intergenic | 35.0% | |
AACATTGAGATGATTCGATG+TGG | + | chr8_3:6148424-6148443 | None:intergenic | 35.0% | |
CGAAAACTATAAGTTTACGC+GGG | + | chr8_3:6148512-6148531 | None:intergenic | 35.0% | |
GCGAAAACTATAAGTTTACG+CGG | + | chr8_3:6148513-6148532 | None:intergenic | 35.0% | |
TAACATTGCTAGAGTAACAG+TGG | + | chr8_3:6148676-6148695 | None:intergenic | 35.0% | |
!!! | CTTCTAAAGTGGACTTTTCA+GGG | + | chr8_3:6148970-6148989 | None:intergenic | 35.0% |
!!! | TCTTCTAAAGTGGACTTTTC+AGG | + | chr8_3:6148971-6148990 | None:intergenic | 35.0% |
! | CCAAATGGCTATAGTACTTT+TGG | + | chr8_3:6149342-6149361 | None:intergenic | 35.0% |
!! | CCAAAAGTACTATAGCCATT+TGG | - | chr8_3:6147441-6147460 | Msa1272480:CDS | 35.0% |
GCAGTAAAAGAATCACCAAA+TGG | + | chr8_3:6149357-6149376 | None:intergenic | 35.0% | |
TTTGAGTGGAAGAAAACCAA+AGG | + | chr8_3:6149427-6149446 | None:intergenic | 35.0% | |
ACTGTTGTATGGTATGCTAA+TGG | - | chr8_3:6149498-6149517 | Msa1272480:intron | 35.0% | |
!! | AGTTCCACTTTTGATCCTTT+TGG | + | chr8_3:6149537-6149556 | None:intergenic | 35.0% |
TCCATAACCTGAAACCATTT+GGG | + | chr8_3:6149590-6149609 | None:intergenic | 35.0% | |
TTCCATAACCTGAAACCATT+TGG | + | chr8_3:6149591-6149610 | None:intergenic | 35.0% | |
! | TTCAGGTTATGGAATACTGA+AGG | - | chr8_3:6149597-6149616 | Msa1272480:intron | 35.0% |
CTCAATGTTAAAGTTTCTCG+CGG | - | chr8_3:6149621-6149640 | Msa1272480:intron | 35.0% | |
ATGGTAAATTCAACAGTCTG+TGG | - | chr8_3:6149679-6149698 | Msa1272480:intron | 35.0% | |
TGGTAAATTCAACAGTCTGT+GGG | - | chr8_3:6149680-6149699 | Msa1272480:intron | 35.0% | |
AAGGAAGAAAGCTTTCTTCA+AGG | - | chr8_3:6149754-6149773 | Msa1272480:intron | 35.0% | |
AAAGCTTTCTTCAAGGCTTA+AGG | - | chr8_3:6149761-6149780 | Msa1272480:intron | 35.0% | |
AAGGAGACAGATTTCAGTAA+AGG | - | chr8_3:6149780-6149799 | Msa1272480:intron | 35.0% | |
AGACAGATTTCAGTAAAGGA+AGG | - | chr8_3:6149784-6149803 | Msa1272480:intron | 35.0% | |
!! | AATTGGTCTTCGACAAATCA+GGG | - | chr8_3:6149934-6149953 | Msa1272480:CDS | 35.0% |
!! | TCAGGGTACTTGTATGTTTT+AGG | - | chr8_3:6148041-6148060 | Msa1272480:CDS | 35.0% |
TCACTCTTAGTTGAACTCTT+GGG | + | chr8_3:6150089-6150108 | None:intergenic | 35.0% | |
TTCACTCTTAGTTGAACTCT+TGG | + | chr8_3:6150090-6150109 | None:intergenic | 35.0% | |
AAGAGTTCAACTAAGAGTGA+AGG | - | chr8_3:6150089-6150108 | Msa1272480:CDS | 35.0% | |
TGTACTTATACTGTTAGTGC+AGG | - | chr8_3:6150146-6150165 | Msa1272480:intron | 35.0% | |
!! | TGTTTTGGACACTGACATTT+TGG | + | chr8_3:6150224-6150243 | None:intergenic | 35.0% |
TGAAGCACATAATCTGATAG+AGG | + | chr8_3:6150380-6150399 | None:intergenic | 35.0% | |
AAGAAGTTACCACTCTCAAA+TGG | - | chr8_3:6150494-6150513 | Msa1272480:CDS | 35.0% | |
AGAAGTTACCACTCTCAAAT+GGG | - | chr8_3:6150495-6150514 | Msa1272480:CDS | 35.0% | |
!! | AGAGTTGATGCAACTCTTAA+TGG | - | chr8_3:6150518-6150537 | Msa1272480:CDS | 35.0% |
AATCAGTGAGTAGAGGAGAA+GGG | + | chr8_3:6147393-6147412 | None:intergenic | 40.0% | |
! | GGTTTGAGATACAACACTGA+TGG | + | chr8_3:6147423-6147442 | None:intergenic | 40.0% |
! | AAACAACCATGAAGAGGTGT+TGG | + | chr8_3:6147486-6147505 | None:intergenic | 40.0% |
AGGTGAAAACAACCATGAAG+AGG | + | chr8_3:6147492-6147511 | None:intergenic | 40.0% | |
!! | TCATGGTTGTTTTCACCTTC+TGG | - | chr8_3:6147494-6147513 | Msa1272480:CDS | 40.0% |
GTGAAACTCATTGCCAATGA+TGG | - | chr8_3:6147651-6147670 | Msa1272480:CDS | 40.0% | |
TTCCATAGCATGTCACCATT+TGG | + | chr8_3:6147693-6147712 | None:intergenic | 40.0% | |
TGACATGCTATGGAATACTG+AGG | - | chr8_3:6147698-6147717 | Msa1272480:CDS | 40.0% | |
GACATGCTATGGAATACTGA+GGG | - | chr8_3:6147699-6147718 | Msa1272480:CDS | 40.0% | |
TGGTAAACTCTTACAGTCGT+TGG | - | chr8_3:6147782-6147801 | Msa1272480:CDS | 40.0% | |
!! | TGGAAGACTTTCAAGTTTCC+TGG | - | chr8_3:6147802-6147821 | Msa1272480:CDS | 40.0% |
AACAACCTGAGAAGACAACA+AGG | + | chr8_3:6147833-6147852 | None:intergenic | 40.0% | |
! | TGTCTTCTCAGGTTGTTGAA+AGG | - | chr8_3:6147836-6147855 | Msa1272480:CDS | 40.0% |
GAGCTCTTTCTGCAAAATGA+TGG | - | chr8_3:6147892-6147911 | Msa1272480:CDS | 40.0% | |
! | AACATGTGTTGGTGTCTGTT+GGG | + | chr8_3:6148125-6148144 | None:intergenic | 40.0% |
! | TAACATGTGTTGGTGTCTGT+TGG | + | chr8_3:6148126-6148145 | None:intergenic | 40.0% |
! | GAGTCTTATCTATCCGATGT+GGG | + | chr8_3:6148237-6148256 | None:intergenic | 40.0% |
! | AGAGTCTTATCTATCCGATG+TGG | + | chr8_3:6148238-6148257 | None:intergenic | 40.0% |
!! | CGGTTTTGTAAGGTTGAGTT+AGG | - | chr8_3:6148301-6148320 | Msa1272480:CDS | 40.0% |
ACTATAAGTTTACGCGGGAA+AGG | + | chr8_3:6148507-6148526 | None:intergenic | 40.0% | |
TGGTTACCTGAATTCGGTAT+CGG | - | chr8_3:6148777-6148796 | Msa1272480:intron | 40.0% | |
AACTTACCGATACCGAATTC+AGG | + | chr8_3:6148786-6148805 | None:intergenic | 40.0% | |
! | GGACTTGTGTTCTTCTAAAG+TGG | + | chr8_3:6148981-6149000 | None:intergenic | 40.0% |
! | CACACAAGTTGGCTTAACTT+TGG | + | chr8_3:6149077-6149096 | None:intergenic | 40.0% |
ATCAGTGAGTAGAGGAGAAA+GGG | + | chr8_3:6149290-6149309 | None:intergenic | 40.0% | |
AATCAGTGAGTAGAGGAGAA+AGG | + | chr8_3:6147393-6147412 | None:intergenic | 40.0% | |
ATTGCAGAATCAGTGAGTAG+AGG | + | chr8_3:6149298-6149317 | None:intergenic | 40.0% | |
GGTTTGAGCTACAACACATA+TGG | + | chr8_3:6149321-6149340 | None:intergenic | 40.0% | |
!! | ACTTTTGATCCTTTTGGTGC+AGG | + | chr8_3:6149531-6149550 | None:intergenic | 40.0% |
TGCACCAAAAGGATCAAAAG+TGG | - | chr8_3:6149530-6149549 | Msa1272480:intron | 40.0% | |
TAACTTCCCCAAATGGTTTC+AGG | - | chr8_3:6149580-6149599 | Msa1272480:intron | 40.0% | |
CCATAACCTGAAACCATTTG+GGG | + | chr8_3:6149589-6149608 | None:intergenic | 40.0% | |
CACAACTTGAGAAGGCAATA+AGG | + | chr8_3:6149730-6149749 | None:intergenic | 40.0% | |
! | CTTATTGCCTTCTCAAGTTG+TGG | - | chr8_3:6149728-6149747 | Msa1272480:intron | 40.0% |
CCTTTATCCACAACTTGAGA+AGG | + | chr8_3:6149738-6149757 | None:intergenic | 40.0% | |
! | CCTTCTCAAGTTGTGGATAA+AGG | - | chr8_3:6149735-6149754 | Msa1272480:intron | 40.0% |
!! | CAATTGGTCTTCGACAAATC+AGG | - | chr8_3:6149933-6149952 | Msa1272480:intron | 40.0% |
GTTCAACTAAGAGTGAAGGT+TGG | - | chr8_3:6150093-6150112 | Msa1272480:CDS | 40.0% | |
TATACTGTTAGTGCAGGTAG+TGG | - | chr8_3:6150152-6150171 | Msa1272480:intron | 40.0% | |
TGCAAGCCAGATTTCATACA+AGG | - | chr8_3:6150281-6150300 | Msa1272480:CDS | 40.0% | |
GCACATCCTTGTATGAAATC+TGG | + | chr8_3:6150290-6150309 | None:intergenic | 40.0% | |
CTACACTGCTCTTCAGTAAA+AGG | + | chr8_3:6150407-6150426 | None:intergenic | 40.0% | |
! | CTTTTACTGAAGAGCAGTGT+AGG | - | chr8_3:6150405-6150424 | Msa1272480:CDS | 40.0% |
GCAGTGTAGGAAATCTTGTA+TGG | - | chr8_3:6150418-6150437 | Msa1272480:CDS | 40.0% | |
GGATGATTGTTTGTGTTCTG+TGG | - | chr8_3:6150439-6150458 | Msa1272480:CDS | 40.0% | |
!! | TGTGTTCTGTGGCTATTTTC+AGG | - | chr8_3:6150450-6150469 | Msa1272480:CDS | 40.0% |
!!! | TCTGTGGCTATTTTCAGGTT+AGG | - | chr8_3:6150455-6150474 | Msa1272480:CDS | 40.0% |
TCAGGTTAGGAGATAGTTGT+TGG | - | chr8_3:6150468-6150487 | Msa1272480:CDS | 40.0% | |
TCACACTTTCAAGAAAGCCT+TGG | + | chr8_3:6150546-6150565 | None:intergenic | 40.0% | |
ATCAGTGAGTAGAGGAGAAG+GGG | + | chr8_3:6147392-6147411 | None:intergenic | 45.0% | |
GAATCAGTGAGTAGAGGAGA+AGG | + | chr8_3:6147394-6147413 | None:intergenic | 45.0% | |
CACAAACCAACACCTCTTCA+TGG | - | chr8_3:6147477-6147496 | Msa1272480:CDS | 45.0% | |
CCTAACGAAAAGTCACCAGA+AGG | + | chr8_3:6147512-6147531 | None:intergenic | 45.0% | |
! | CCTTCTGGTGACTTTTCGTT+AGG | - | chr8_3:6147509-6147528 | Msa1272480:CDS | 45.0% |
AGACAGTCCTGCACCAAAAA+GGG | - | chr8_3:6147622-6147641 | Msa1272480:CDS | 45.0% | |
!! | CTTTTGACCCTTTTTGGTGC+AGG | + | chr8_3:6147632-6147651 | None:intergenic | 45.0% |
CTCCAAATGGTGACATGCTA+TGG | - | chr8_3:6147688-6147707 | Msa1272480:CDS | 45.0% | |
CTATGGAATACTGAGGGACT+CGG | - | chr8_3:6147705-6147724 | Msa1272480:CDS | 45.0% | |
CTCGGTGATAGAGTTTCTCA+TGG | - | chr8_3:6147723-6147742 | Msa1272480:CDS | 45.0% | |
CATGGTGTGTTCAATGACAC+AGG | - | chr8_3:6147741-6147760 | Msa1272480:CDS | 45.0% | |
GGAAACTCTGTACTTGACGA+TGG | - | chr8_3:6147762-6147781 | Msa1272480:CDS | 45.0% | |
! | TGACACCTTGTTGTCTTCTC+AGG | - | chr8_3:6147825-6147844 | Msa1272480:CDS | 45.0% |
AGTTCCAGCACTTGATGTAC+TGG | + | chr8_3:6148003-6148022 | None:intergenic | 45.0% | |
! | ATCCCTTAGATCAGAGGCAT+CGG | + | chr8_3:6148077-6148096 | None:intergenic | 45.0% |
ATCTAAGGGATGTCTGGTGT+CGG | - | chr8_3:6148086-6148105 | Msa1272480:CDS | 45.0% | |
! | ACATGTGTTGGTGTCTGTTG+GGG | + | chr8_3:6148124-6148143 | None:intergenic | 45.0% |
GAAAAACCCAAGTCCCACAT+CGG | - | chr8_3:6148221-6148240 | Msa1272480:CDS | 45.0% | |
ATCTATCCGATGTGGGACTT+GGG | + | chr8_3:6148230-6148249 | None:intergenic | 45.0% | |
TATCTATCCGATGTGGGACT+TGG | + | chr8_3:6148231-6148250 | None:intergenic | 45.0% | |
ACAATCCTCACCTTACAAGC+CGG | - | chr8_3:6148281-6148300 | Msa1272480:CDS | 45.0% | |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr8_3:6148294-6148313 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr8_3:6148291-6148310 | Msa1272480:CDS | 45.0% |
AGAAACTCATCCTGTCGTCT+TGG | + | chr8_3:6148329-6148348 | None:intergenic | 45.0% | |
AAGACGACAGGATGAGTTTC+TGG | - | chr8_3:6148328-6148347 | Msa1272480:CDS | 45.0% | |
GCTATGTATGCAGTGCTTCA+TGG | + | chr8_3:6148563-6148582 | None:intergenic | 45.0% | |
TGGAACTCACTGCCAATGAT+GGG | - | chr8_3:6149550-6149569 | Msa1272480:intron | 45.0% | |
AGTTAGCACCAACCCATCAT+TGG | + | chr8_3:6149565-6149584 | None:intergenic | 45.0% | |
!! | TTGGTGCTAACTTCCCCAAA+TGG | - | chr8_3:6149573-6149592 | Msa1272480:intron | 45.0% |
!! | CCCCAAATGGTTTCAGGTTA+TGG | - | chr8_3:6149586-6149605 | Msa1272480:intron | 45.0% |
ATCCTCAAGCACAAAGTTGC+CGG | + | chr8_3:6149661-6149680 | None:intergenic | 45.0% | |
!! | GAAGGCAATAAGGTGTCACT+AGG | + | chr8_3:6149720-6149739 | None:intergenic | 45.0% |
!! | ATCAAGTGCTGGAGCTCAAT+TGG | - | chr8_3:6149917-6149936 | Msa1272480:intron | 45.0% |
AAAGGGCTTAGACGATACTG+TGG | + | chr8_3:6150120-6150139 | None:intergenic | 45.0% | |
CAGCTGCCATATGGATCATT+AGG | + | chr8_3:6150263-6150282 | None:intergenic | 45.0% | |
TCAACTCTCCCATTTGAGAG+TGG | + | chr8_3:6150506-6150525 | None:intergenic | 45.0% | |
! | TGCAACTCTTAATGGTGCCA+AGG | - | chr8_3:6150526-6150545 | Msa1272480:CDS | 45.0% |
GAGACAGTCCTGCACCAAAA+AGG | - | chr8_3:6147621-6147640 | Msa1272480:CDS | 50.0% | |
!! | ACTCATTGCCAATGATGGGC+TGG | - | chr8_3:6147656-6147675 | Msa1272480:CDS | 50.0% |
! | GAAGACAACAAGGTGTCACC+AGG | + | chr8_3:6147823-6147842 | None:intergenic | 50.0% |
GGATCCAGTACATCAAGTGC+TGG | - | chr8_3:6147996-6148015 | Msa1272480:CDS | 50.0% | |
CACCGATGCCTCTGATCTAA+GGG | - | chr8_3:6148072-6148091 | Msa1272480:CDS | 50.0% | |
CCAGACATCCCTTAGATCAG+AGG | + | chr8_3:6148083-6148102 | None:intergenic | 50.0% | |
CCTCTGATCTAAGGGATGTC+TGG | - | chr8_3:6148080-6148099 | Msa1272480:CDS | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr8_3:6148289-6148308 | None:intergenic | 50.0% |
TCGCACCCAGCACACAAAAT+AGG | - | chr8_3:6148529-6148548 | Msa1272480:CDS | 50.0% | |
GAGGAGAAAGGGAAGCAAAG+AGG | + | chr8_3:6149279-6149298 | None:intergenic | 50.0% | |
CCAGAAGGTGAAAGCAACCA+GGG | + | chr8_3:6149396-6149415 | None:intergenic | 50.0% | |
ACCAGAAGGTGAAAGCAACC+AGG | + | chr8_3:6149397-6149416 | None:intergenic | 50.0% | |
CCAAAGGCAAAGTCACCAGA+AGG | + | chr8_3:6149411-6149430 | None:intergenic | 50.0% | |
CCTTCTGGTGACTTTGCCTT+TGG | - | chr8_3:6149408-6149427 | Msa1272480:intron | 50.0% | |
GTGGAACTCACTGCCAATGA+TGG | - | chr8_3:6149549-6149568 | Msa1272480:intron | 50.0% | |
!! | ACTCACTGCCAATGATGGGT+TGG | - | chr8_3:6149554-6149573 | Msa1272480:intron | 50.0% |
GGCAACTTTGTGCTTGAGGA+TGG | - | chr8_3:6149660-6149679 | Msa1272480:intron | 50.0% | |
GGATCCAGTACATCAAGTGC+TGG | - | chr8_3:6147996-6148015 | Msa1272480:CDS | 50.0% | |
AGCTCCAGCACTTGATGTAC+TGG | + | chr8_3:6149913-6149932 | None:intergenic | 50.0% | |
! | AGTGCAGGTAGTGGTGTTTG+TGG | - | chr8_3:6150161-6150180 | Msa1272480:intron | 50.0% |
GAGGAGAAGGGGAAGTAGAG+AGG | + | chr8_3:6147381-6147400 | None:intergenic | 55.0% | |
!! | TTGCCAATGATGGGCTGGTG+CGG | - | chr8_3:6147661-6147680 | Msa1272480:CDS | 55.0% |
! | GCACCGATGCCTCTGATCTA+AGG | - | chr8_3:6148071-6148090 | Msa1272480:CDS | 55.0% |
GAGTTAGGCTCCAAGACGAC+AGG | - | chr8_3:6148316-6148335 | Msa1272480:CDS | 55.0% | |
AGGTGAAAGCAACCAGGGAG+AGG | + | chr8_3:6149391-6149410 | None:intergenic | 55.0% | |
! | CCCTGGTTGCTTTCACCTTC+TGG | - | chr8_3:6149393-6149412 | Msa1272480:intron | 55.0% |
GGAGACAGTCCTGCACCAAA+AGG | - | chr8_3:6149519-6149538 | Msa1272480:intron | 55.0% | |
CGCGGTGTGTTGAATGACAC+CGG | - | chr8_3:6149639-6149658 | Msa1272480:intron | 55.0% | |
CACCGGCAACTTTGTGCTTG+AGG | - | chr8_3:6149656-6149675 | Msa1272480:intron | 55.0% | |
! | TCTGGCTTGCAGCTGCCATA+TGG | + | chr8_3:6150272-6150291 | None:intergenic | 55.0% |
!! | TGCCAATGATGGGCTGGTGC+GGG | - | chr8_3:6147662-6147681 | Msa1272480:CDS | 60.0% |
CTGGTGCGGGCTTCTCCAAA+TGG | - | chr8_3:6147675-6147694 | Msa1272480:CDS | 60.0% | |
!! | GATACGGAAACGGCACCGAC+AGG | + | chr8_3:6148180-6148199 | None:intergenic | 60.0% |
CACAAACCAGCACCTCTCCC+TGG | - | chr8_3:6149376-6149395 | Msa1272480:intron | 60.0% | |
! | AAGCAACCAGGGAGAGGTGC+TGG | + | chr8_3:6149385-6149404 | None:intergenic | 60.0% |
AGCCCGCACCAGCCCATCAT+TGG | + | chr8_3:6147667-6147686 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 6147371 | 6150565 | 6147371 | ID=Msa1272480;Name=Msa1272480 |
chr8_3 | mRNA | 6147371 | 6150565 | 6147371 | ID=Msa1272480-mRNA-1;Parent=Msa1272480;Name=Msa1272480-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0|0|4|0|594 |
chr8_3 | exon | 6150326 | 6150565 | 6150326 | ID=Msa1272480-mRNA-1:exon:2255;Parent=Msa1272480-mRNA-1 |
chr8_3 | exon | 6150166 | 6150312 | 6150166 | ID=Msa1272480-mRNA-1:exon:2254;Parent=Msa1272480-mRNA-1 |
chr8_3 | exon | 6149934 | 6150119 | 6149934 | ID=Msa1272480-mRNA-1:exon:2253;Parent=Msa1272480-mRNA-1 |
chr8_3 | exon | 6147371 | 6148582 | 6147371 | ID=Msa1272480-mRNA-1:exon:2252;Parent=Msa1272480-mRNA-1 |
chr8_3 | CDS | 6150326 | 6150565 | 6150326 | ID=Msa1272480-mRNA-1:cds;Parent=Msa1272480-mRNA-1 |
chr8_3 | CDS | 6150166 | 6150312 | 6150166 | ID=Msa1272480-mRNA-1:cds;Parent=Msa1272480-mRNA-1 |
chr8_3 | CDS | 6149934 | 6150119 | 6149934 | ID=Msa1272480-mRNA-1:cds;Parent=Msa1272480-mRNA-1 |
chr8_3 | CDS | 6147371 | 6148582 | 6147371 | ID=Msa1272480-mRNA-1:cds;Parent=Msa1272480-mRNA-1 |
Gene Sequence |
Protein sequence |