Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015250 | XP_013448244.1 | 90.537 | 391 | 12 | 1 | 60 | 425 | 1 | 391 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015250 | A0A072TYL1 | 90.537 | 391 | 12 | 1 | 60 | 425 | 1 | 391 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa1015250 | 0.806590 | 7.640790e-50 | -8.615850e-47 |
| Msa0016040 | Msa1015250 | 0.816844 | 4.484270e-52 | -8.615850e-47 |
| Msa0020540 | Msa1015250 | 0.822066 | 2.890410e-53 | -8.615850e-47 |
| Msa0032970 | Msa1015250 | 0.818584 | 1.815880e-52 | -8.615850e-47 |
| Msa0032980 | Msa1015250 | 0.845280 | 4.481236e-59 | -8.615850e-47 |
| Msa0053070 | Msa1015250 | 0.806280 | 8.882816e-50 | -8.615850e-47 |
| Msa0062340 | Msa1015250 | 0.842589 | 2.358155e-58 | -8.615850e-47 |
| Msa0067380 | Msa1015250 | 0.806847 | 6.742206e-50 | -8.615850e-47 |
| Msa0074360 | Msa1015250 | 0.803948 | 2.731893e-49 | -8.615850e-47 |
| Msa0078130 | Msa1015250 | 0.818825 | 1.601538e-52 | -8.615850e-47 |
| Msa0091350 | Msa1015250 | 0.843029 | 1.800673e-58 | -8.615850e-47 |
| Msa0098410 | Msa1015250 | 0.805553 | 1.262531e-49 | -8.615850e-47 |
| Msa0106630 | Msa1015250 | 0.802976 | 4.344409e-49 | -8.615850e-47 |
| Msa0115550 | Msa1015250 | 0.811391 | 7.167775e-51 | -8.615850e-47 |
| Msa0606100 | Msa1015250 | 0.818163 | 2.262339e-52 | -8.615850e-47 |
| Msa0607800 | Msa1015250 | 0.865072 | 7.699526e-65 | -8.615850e-47 |
| Msa0608350 | Msa1015250 | 0.815991 | 6.960056e-52 | -8.615850e-47 |
| Msa0613580 | Msa1015250 | 0.802768 | 4.796162e-49 | -8.615850e-47 |
| Msa0615630 | Msa1015250 | 0.835792 | 1.364979e-56 | -8.615850e-47 |
| Msa0620500 | Msa1015250 | 0.845064 | 5.126010e-59 | -8.615850e-47 |
| Msa0621710 | Msa1015250 | 0.828907 | 6.925341e-55 | -8.615850e-47 |
| Msa0622920 | Msa1015250 | 0.831277 | 1.828681e-55 | -8.615850e-47 |
| Msa0647050 | Msa1015250 | 0.824038 | 1.002199e-53 | -8.615850e-47 |
| Msa0647440 | Msa1015250 | 0.817972 | 2.498559e-52 | -8.615850e-47 |
| Msa0648040 | Msa1015250 | 0.866953 | 1.954454e-65 | -8.615850e-47 |
| Msa0648760 | Msa1015250 | 0.819452 | 1.152863e-52 | -8.615850e-47 |
| Msa0654740 | Msa1015250 | 0.809623 | 1.727187e-50 | -8.615850e-47 |
| Msa0668900 | Msa1015250 | 0.810621 | 1.052268e-50 | -8.615850e-47 |
| Msa0681050 | Msa1015250 | 0.809993 | 1.437454e-50 | -8.615850e-47 |
| Msa0690320 | Msa1015250 | 0.818005 | 2.455774e-52 | -8.615850e-47 |
| Msa0690740 | Msa1015250 | 0.861489 | 9.895676e-64 | -8.615850e-47 |
| Msa0691270 | Msa1015250 | 0.823683 | 1.213541e-53 | -8.615850e-47 |
| Msa0698730 | Msa1015250 | 0.800197 | 1.613457e-48 | -8.615850e-47 |
| Msa0703600 | Msa1015250 | 0.826411 | 2.753539e-54 | -8.615850e-47 |
| Msa0709200 | Msa1015250 | 0.826523 | 2.588815e-54 | -8.615850e-47 |
| Msa0709440 | Msa1015250 | 0.824295 | 8.721382e-54 | -8.615850e-47 |
| Msa0713920 | Msa1015250 | 0.829599 | 4.702701e-55 | -8.615850e-47 |
| Msa0714520 | Msa1015250 | 0.864710 | 9.996432e-65 | -8.615850e-47 |
| Msa0714790 | Msa1015250 | 0.810526 | 1.103033e-50 | -8.615850e-47 |
| Msa0716480 | Msa1015250 | 0.809729 | 1.638447e-50 | -8.615850e-47 |
| Msa0717900 | Msa1015250 | 0.829306 | 5.542151e-55 | -8.615850e-47 |
| Msa0735780 | Msa1015250 | 0.807920 | 3.992801e-50 | -8.615850e-47 |
| Msa0743440 | Msa1015250 | 0.856448 | 3.194683e-62 | -8.615850e-47 |
| Msa0745720 | Msa1015250 | 0.829063 | 6.348055e-55 | -8.615850e-47 |
| Msa0747740 | Msa1015250 | 0.817798 | 2.735235e-52 | -8.615850e-47 |
| Msa0756180 | Msa1015250 | 0.845732 | 3.381088e-59 | -8.615850e-47 |
| Msa0756820 | Msa1015250 | 0.811414 | 7.087123e-51 | -8.615850e-47 |
| Msa0758650 | Msa1015250 | 0.823565 | 1.293424e-53 | -8.615850e-47 |
| Msa0763550 | Msa1015250 | 0.809579 | 1.764495e-50 | -8.615850e-47 |
| Msa0765810 | Msa1015250 | 0.810426 | 1.159744e-50 | -8.615850e-47 |
| Msa0773630 | Msa1015250 | 0.813432 | 2.567420e-51 | -8.615850e-47 |
| Msa0778550 | Msa1015250 | 0.808415 | 3.131901e-50 | -8.615850e-47 |
| Msa0780910 | Msa1015250 | 0.839248 | 1.774689e-57 | -8.615850e-47 |
| Msa0800660 | Msa1015250 | 0.810906 | 9.130201e-51 | -8.615850e-47 |
| Msa0805680 | Msa1015250 | 0.829193 | 5.904197e-55 | -8.615850e-47 |
| Msa0811020 | Msa1015250 | 0.812704 | 3.708989e-51 | -8.615850e-47 |
| Msa0816080 | Msa1015250 | 0.837207 | 5.957387e-57 | -8.615850e-47 |
| Msa0818880 | Msa1015250 | 0.812133 | 4.942195e-51 | -8.615850e-47 |
| Msa0821160 | Msa1015250 | 0.822128 | 2.795050e-53 | -8.615850e-47 |
| Msa0837460 | Msa1015250 | 0.822403 | 2.413142e-53 | -8.615850e-47 |
| Msa0123320 | Msa1015250 | 0.813744 | 2.192371e-51 | -8.615850e-47 |
| Msa0127340 | Msa1015250 | 0.817156 | 3.816935e-52 | -8.615850e-47 |
| Msa0127680 | Msa1015250 | 0.813867 | 2.059884e-51 | -8.615850e-47 |
| Msa0140380 | Msa1015250 | 0.828607 | 8.182262e-55 | -8.615850e-47 |
| Msa0153210 | Msa1015250 | 0.806712 | 7.199803e-50 | -8.615850e-47 |
| Msa0159590 | Msa1015250 | 0.835750 | 1.399368e-56 | -8.615850e-47 |
| Msa0159620 | Msa1015250 | 0.826612 | 2.465973e-54 | -8.615850e-47 |
| Msa0165830 | Msa1015250 | 0.835951 | 1.243902e-56 | -8.615850e-47 |
| Msa0168050 | Msa1015250 | 0.807013 | 6.219277e-50 | -8.615850e-47 |
| Msa0190730 | Msa1015250 | 0.808479 | 3.035103e-50 | -8.615850e-47 |
| Msa0232760 | Msa1015250 | 0.807595 | 4.680580e-50 | -8.615850e-47 |
| Msa0368860 | Msa1015250 | 0.832761 | 7.858343e-56 | -8.615850e-47 |
| Msa0373170 | Msa1015250 | 0.813851 | 2.075837e-51 | -8.615850e-47 |
| Msa0373500 | Msa1015250 | 0.813691 | 2.251283e-51 | -8.615850e-47 |
| Msa0373590 | Msa1015250 | 0.802866 | 4.578366e-49 | -8.615850e-47 |
| Msa0377710 | Msa1015250 | 0.849249 | 3.651203e-60 | -8.615850e-47 |
| Msa0383000 | Msa1015250 | 0.837144 | 6.180801e-57 | -8.615850e-47 |
| Msa0412130 | Msa1015250 | 0.808062 | 3.723853e-50 | -8.615850e-47 |
| Msa0413170 | Msa1015250 | 0.801939 | 7.105827e-49 | -8.615850e-47 |
| Msa0421130 | Msa1015250 | 0.818697 | 1.711798e-52 | -8.615850e-47 |
| Msa0421150 | Msa1015250 | 0.820874 | 5.446758e-53 | -8.615850e-47 |
| Msa0421750 | Msa1015250 | 0.823522 | 1.324175e-53 | -8.615850e-47 |
| Msa0430480 | Msa1015250 | 0.809836 | 1.553614e-50 | -8.615850e-47 |
| Msa0432010 | Msa1015250 | 0.818330 | 2.073614e-52 | -8.615850e-47 |
| Msa0433150 | Msa1015250 | 0.834341 | 3.170963e-56 | -8.615850e-47 |
| Msa0433760 | Msa1015250 | 0.825763 | 3.925712e-54 | -8.615850e-47 |
| Msa0447750 | Msa1015250 | 0.804527 | 2.070005e-49 | -8.615850e-47 |
| Msa0462780 | Msa1015250 | 0.836502 | 9.010507e-57 | -8.615850e-47 |
| Msa0466520 | Msa1015250 | 0.811055 | 8.476385e-51 | -8.615850e-47 |
| Msa0466880 | Msa1015250 | 0.814960 | 1.180790e-51 | -8.615850e-47 |
| Msa0467690 | Msa1015250 | 0.820830 | 5.573398e-53 | -8.615850e-47 |
| Msa0468620 | Msa1015250 | 0.805842 | 1.098108e-49 | -8.615850e-47 |
| Msa0477630 | Msa1015250 | 0.823842 | 1.114365e-53 | -8.615850e-47 |
| Msa0480730 | Msa1015250 | 0.806034 | 1.000597e-49 | -8.615850e-47 |
| Msa0481890 | Msa1015250 | 0.823180 | 1.591283e-53 | -8.615850e-47 |
| Msa0989370 | Msa1015250 | 0.822615 | 2.154275e-53 | -8.615850e-47 |
| Msa1002640 | Msa1015250 | 0.825337 | 4.951753e-54 | -8.615850e-47 |
| Msa1008670 | Msa1015250 | 0.830242 | 3.278547e-55 | -8.615850e-47 |
| Msa1008680 | Msa1015250 | 0.819057 | 1.418081e-52 | -8.615850e-47 |
| Msa1015250 | Msa1033920 | 0.822074 | 2.878071e-53 | -8.615850e-47 |
| Msa1015250 | Msa1035650 | 0.816730 | 4.755699e-52 | -8.615850e-47 |
| Msa1015250 | Msa1042880 | 0.813069 | 3.084990e-51 | -8.615850e-47 |
| Msa1015250 | Msa1056830 | 0.883192 | 5.525871e-71 | -8.615850e-47 |
| Msa1015250 | Msa1076020 | 0.824428 | 8.113352e-54 | -8.615850e-47 |
| Msa1015250 | Msa1082380 | 0.830193 | 3.369815e-55 | -8.615850e-47 |
| Msa1015250 | Msa1084530 | 0.829073 | 6.310660e-55 | -8.615850e-47 |
| Msa1015250 | Msa1092420 | 0.853543 | 2.229403e-61 | -8.615850e-47 |
| Msa1015250 | Msa1104220 | 0.804172 | 2.454442e-49 | -8.615850e-47 |
| Msa1015250 | Msa1116190 | 0.817292 | 3.556233e-52 | -8.615850e-47 |
| Msa1015250 | Msa1125820 | 0.832769 | 7.823355e-56 | -8.615850e-47 |
| Msa1015250 | Msa1125990 | 0.830677 | 2.566464e-55 | -8.615850e-47 |
| Msa1015250 | Msa1127280 | 0.849477 | 3.153209e-60 | -8.615850e-47 |
| Msa1015250 | Msa1127470 | 0.841312 | 5.130171e-58 | -8.615850e-47 |
| Msa1015250 | Msa1132530 | 0.847178 | 1.362920e-59 | -8.615850e-47 |
| Msa1015250 | Msa1159590 | 0.807003 | 6.248081e-50 | -8.615850e-47 |
| Msa1015250 | Msa1162880 | 0.814895 | 1.220431e-51 | -8.615850e-47 |
| Msa1015250 | Msa1163180 | 0.813334 | 2.697244e-51 | -8.615850e-47 |
| Msa1015250 | Msa1165480 | 0.844669 | 6.551059e-59 | -8.615850e-47 |
| Msa1015250 | Msa1171070 | 0.814889 | 1.224016e-51 | -8.615850e-47 |
| Msa1015250 | Msa1171290 | 0.818738 | 1.675668e-52 | -8.615850e-47 |
| Msa1015250 | Msa1190390 | 0.805540 | 1.270928e-49 | -8.615850e-47 |
| Msa1015250 | Msa1201540 | 0.812727 | 3.665489e-51 | -8.615850e-47 |
| Msa1015250 | Msa1201780 | 0.833682 | 4.634629e-56 | -8.615850e-47 |
| Msa1015250 | Msa1213830 | 0.827722 | 1.336887e-54 | -8.615850e-47 |
| Msa1015250 | Msa1214350 | 0.827409 | 1.589460e-54 | -8.615850e-47 |
| Msa1015250 | Msa1215980 | 0.845898 | 3.047499e-59 | -8.615850e-47 |
| Msa1015250 | Msa1218820 | 0.821453 | 4.005464e-53 | -8.615850e-47 |
| Msa1015250 | Msa1219770 | 0.810635 | 1.044863e-50 | -8.615850e-47 |
| Msa1015250 | Msa1223390 | 0.822361 | 2.468334e-53 | -8.615850e-47 |
| Msa1015250 | Msa1244240 | 0.808592 | 2.871724e-50 | -8.615850e-47 |
| Msa1015250 | Msa1252790 | 0.808930 | 2.431129e-50 | -8.615850e-47 |
| Msa1015250 | Msa1254420 | 0.812882 | 3.390649e-51 | -8.615850e-47 |
| Msa1015250 | Msa1254540 | 0.845119 | 4.953191e-59 | -8.615850e-47 |
| Msa1015250 | Msa1261050 | 0.827441 | 1.562153e-54 | -8.615850e-47 |
| Msa1015250 | Msa1263740 | 0.820448 | 6.821392e-53 | -8.615850e-47 |
| Msa1015250 | Msa1263780 | 0.834260 | 3.321057e-56 | -8.615850e-47 |
| Msa1015250 | Msa1263900 | 0.807830 | 4.173051e-50 | -8.615850e-47 |
| Msa1015250 | Msa1268540 | 0.827758 | 1.310611e-54 | -8.615850e-47 |
| Msa1015250 | Msa1279120 | 0.813479 | 2.507185e-51 | -8.615850e-47 |
| Msa1015250 | Msa1294460 | 0.869654 | 2.632478e-66 | -8.615850e-47 |
| Msa1015250 | Msa1294790 | 0.843474 | 1.370133e-58 | -8.615850e-47 |
| Msa1015250 | Msa1300460 | 0.828129 | 1.067440e-54 | -8.615850e-47 |
| Msa1015250 | Msa1301820 | 0.821554 | 3.796904e-53 | -8.615850e-47 |
| Msa1015250 | Msa1305780 | 0.826585 | 2.501967e-54 | -8.615850e-47 |
| Msa1015250 | Msa1306570 | 0.811021 | 8.623509e-51 | -8.615850e-47 |
| Msa1015250 | Msa1306790 | 0.809769 | 1.606135e-50 | -8.615850e-47 |
| Msa1015250 | Msa1332950 | 0.848934 | 4.465082e-60 | -8.615850e-47 |
| Msa1015250 | Msa1338210 | 0.814541 | 1.462092e-51 | -8.615850e-47 |
| Msa1015250 | Msa1339170 | 0.843745 | 1.159845e-58 | -8.615850e-47 |
| Msa1015250 | Msa1361930 | 0.817179 | 3.771306e-52 | -8.615850e-47 |
| Msa1015250 | Msa1362130 | 0.840720 | 7.338205e-58 | -8.615850e-47 |
| Msa1015250 | Msa1364410 | 0.812444 | 4.227389e-51 | -8.615850e-47 |
| Msa1015250 | Msa1364680 | 0.824195 | 9.205668e-54 | -8.615850e-47 |
| Msa1015250 | Msa1365500 | 0.832601 | 8.611544e-56 | -8.615850e-47 |
| Msa1015250 | Msa1366150 | 0.816035 | 6.804647e-52 | -8.615850e-47 |
| Msa1015250 | Msa1367180 | 0.805158 | 1.527599e-49 | -8.615850e-47 |
| Msa1015250 | Msa1368750 | 0.821220 | 4.534158e-53 | -8.615850e-47 |
| Msa1015250 | Msa1374790 | 0.819779 | 9.709558e-53 | -8.615850e-47 |
| Msa1015250 | Msa1375350 | 0.815538 | 8.780822e-52 | -8.615850e-47 |
| Msa1015250 | Msa1381470 | 0.836166 | 1.097431e-56 | -8.615850e-47 |
| Msa1015250 | Msa1387440 | 0.814114 | 1.816280e-51 | -8.615850e-47 |
| Msa1015250 | Msa1417060 | 0.838930 | 2.146185e-57 | -8.615850e-47 |
| Msa1015250 | Msa1426320 | 0.810595 | 1.065930e-50 | -8.615850e-47 |
| Msa1015250 | Msa1432520 | 0.815418 | 9.338126e-52 | -8.615850e-47 |
| Msa1015250 | Msa1434640 | 0.800337 | 1.511089e-48 | -8.615850e-47 |
| Msa1015250 | Msa1442260 | 0.825565 | 4.373739e-54 | -8.615850e-47 |
| Msa1015250 | Msa1445120 | 0.808300 | 3.313422e-50 | -8.615850e-47 |
| Msa1015250 | Msa1450190 | 0.827264 | 1.721711e-54 | -8.615850e-47 |
| Msa1015250 | Msa1451820 | 0.819389 | 1.191698e-52 | -8.615850e-47 |
| Msa1015250 | Msa1457840 | 0.811551 | 6.617765e-51 | -8.615850e-47 |
| Msa1015250 | Msa1465360 | 0.832664 | 8.310894e-56 | -8.615850e-47 |
| Msa0272260 | Msa1015250 | 0.832064 | 1.169645e-55 | -8.615850e-47 |
| Msa0298580 | Msa1015250 | 0.809798 | 1.583355e-50 | -8.615850e-47 |
| Msa0343010 | Msa1015250 | 0.803391 | 3.565679e-49 | -8.615850e-47 |
| Msa0514020 | Msa1015250 | 0.823742 | 1.175939e-53 | -8.615850e-47 |
| Msa0514500 | Msa1015250 | 0.805998 | 1.018366e-49 | -8.615850e-47 |
| Msa0520870 | Msa1015250 | 0.832781 | 7.769672e-56 | -8.615850e-47 |
| Msa0521680 | Msa1015250 | 0.838200 | 3.312203e-57 | -8.615850e-47 |
| Msa0524520 | Msa1015250 | 0.808713 | 2.705270e-50 | -8.615850e-47 |
| Msa0545920 | Msa1015250 | 0.801174 | 1.019749e-48 | -8.615850e-47 |
| Msa0553750 | Msa1015250 | 0.836214 | 1.066777e-56 | -8.615850e-47 |
| Msa0554300 | Msa1015250 | 0.820748 | 5.823347e-53 | -8.615850e-47 |
| Msa0561560 | Msa1015250 | 0.830674 | 2.570794e-55 | -8.615850e-47 |
| Msa0563740 | Msa1015250 | 0.813742 | 2.193695e-51 | -8.615850e-47 |
| Msa0563900 | Msa1015250 | 0.809210 | 2.117685e-50 | -8.615850e-47 |
| Msa0567170 | Msa1015250 | 0.807679 | 4.493778e-50 | -8.615850e-47 |
| Msa0569530 | Msa1015250 | 0.800769 | 1.233571e-48 | -8.615850e-47 |
| Msa0571620 | Msa1015250 | 0.810506 | 1.114130e-50 | -8.615850e-47 |
| Msa0572830 | Msa1015250 | 0.805885 | 1.075554e-49 | -8.615850e-47 |
| Msa0577280 | Msa1015250 | 0.831207 | 1.902921e-55 | -8.615850e-47 |
| Msa0577330 | Msa1015250 | 0.833054 | 6.645234e-56 | -8.615850e-47 |
| Msa0577450 | Msa1015250 | 0.806875 | 6.651114e-50 | -8.615850e-47 |
| Msa0581840 | Msa1015250 | 0.804338 | 2.266088e-49 | -8.615850e-47 |
| Msa0590200 | Msa1015250 | 0.817458 | 3.263019e-52 | -8.615850e-47 |
| Msa0593400 | Msa1015250 | 0.803785 | 2.953936e-49 | -8.615850e-47 |
| Msa0601720 | Msa1015250 | 0.808505 | 2.996669e-50 | -8.615850e-47 |
| Msa0851300 | Msa1015250 | 0.817242 | 3.650350e-52 | -8.615850e-47 |
| Msa0855230 | Msa1015250 | 0.800298 | 1.539154e-48 | -8.615850e-47 |
| Msa0857800 | Msa1015250 | 0.800669 | 1.293112e-48 | -8.615850e-47 |
| Msa0861440 | Msa1015250 | 0.809912 | 1.496166e-50 | -8.615850e-47 |
| Msa0863620 | Msa1015250 | 0.820488 | 6.681840e-53 | -8.615850e-47 |
| Msa0867110 | Msa1015250 | 0.832694 | 8.167517e-56 | -8.615850e-47 |
| Msa0879920 | Msa1015250 | 0.840853 | 6.770740e-58 | -8.615850e-47 |
| Msa0888790 | Msa1015250 | 0.820576 | 6.377592e-53 | -8.615850e-47 |
| Msa0924430 | Msa1015250 | 0.816667 | 4.915027e-52 | -8.615850e-47 |
| Msa0931590 | Msa1015250 | 0.838562 | 2.672016e-57 | -8.615850e-47 |
| Msa0966320 | Msa1015250 | 0.805447 | 1.328992e-49 | -8.615850e-47 |
| Msa0966480 | Msa1015250 | 0.812540 | 4.027721e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015250 | MtrunA17_Chr7g0228421 | 90.537 | 391 | 12 | 1 | 60 | 425 | 1 | 391 | 0.0 | 683 |
| Msa1015250 | MtrunA17_Chr8g0377881 | 43.182 | 88 | 25 | 2 | 200 | 262 | 7 | 94 | 5.76e-15 | 72.0 |
| Msa1015250 | MtrunA17_Chr7g0228431 | 53.333 | 60 | 18 | 1 | 185 | 244 | 123 | 172 | 8.99e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1015250 | AT3G27330.1 | 38.832 | 394 | 159 | 13 | 54 | 416 | 567 | 909 | 4.36e-49 | 179 |
Find 105 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGCTTCTCTAATATTTA+AGG | 0.118236 | 7_1:-27387678 | None:intergenic |
| CCCTACCATGGTTAAGTTAT+TGG | 0.122488 | 7_1:-27388286 | None:intergenic |
| TTATTGTAAAATGCTGTTTC+TGG | 0.158375 | 7_1:-27387716 | None:intergenic |
| CTTCAATTTCTTGAGGAAAT+AGG | 0.182917 | 7_1:-27387634 | None:intergenic |
| CAGGGGTATCTTCAACAATT+AGG | 0.202307 | 7_1:-27386127 | None:intergenic |
| TTAATGATAATTACCTTTCT+TGG | 0.217346 | 7_1:-27386536 | None:intergenic |
| TCGCAAACGAACAATGTTAT+TGG | 0.234624 | 7_1:-27385936 | None:intergenic |
| TAAAATGCTGTTTCTGGAAT+TGG | 0.263282 | 7_1:-27387710 | None:intergenic |
| GTTATTGGTTCTTGTTGTTT+TGG | 0.264303 | 7_1:-27385921 | None:intergenic |
| TTCTGCTGCTCTTCCTTGTA+TGG | 0.267924 | 7_1:+27386896 | Msa1015250:CDS |
| CCTACCATGGTTAAGTTATT+GGG | 0.277496 | 7_1:-27388285 | None:intergenic |
| ATTTGCTCTAGCTAATAAAT+TGG | 0.279320 | 7_1:-27388077 | None:intergenic |
| TCATGATTACCTTGATGAAT+TGG | 0.313369 | 7_1:-27386210 | None:intergenic |
| AATTGGTTGTGGTGGATTCC+TGG | 0.316308 | 7_1:-27386485 | None:intergenic |
| CATCATCCAGTATTATTTCC+TGG | 0.319089 | 7_1:-27387799 | None:intergenic |
| TAATGATAATTACCTTTCTT+GGG | 0.320688 | 7_1:-27386535 | None:intergenic |
| CAAGTAGGGGTATGAATTCT+AGG | 0.342271 | 7_1:+27387771 | Msa1015250:CDS |
| TGCTGCTGCTATGGCTGGTT+GGG | 0.344885 | 7_1:+27386079 | Msa1015250:CDS |
| GTGTAAGAGGGAGGACAAGA+AGG | 0.357536 | 7_1:+27387951 | Msa1015250:CDS |
| TCATTGTTGTCGATGTTCTA+TGG | 0.358204 | 7_1:-27387880 | None:intergenic |
| AAGATGCTGCATTTGCTCTA+AGG | 0.363988 | 7_1:+27387993 | Msa1015250:CDS |
| GAGAGTAACAGCGACGAAAA+TGG | 0.366761 | 7_1:+27385959 | Msa1015250:CDS |
| ATACCCCTACTTGATGGATA+TGG | 0.366991 | 7_1:-27387761 | None:intergenic |
| AGGGGTATCTTCAACAATTA+GGG | 0.379967 | 7_1:-27386126 | None:intergenic |
| TGATGAGCGAAGCCATGTTT+TGG | 0.388512 | 7_1:-27386040 | None:intergenic |
| GAATTCATACCCCTACTTGA+TGG | 0.390998 | 7_1:-27387767 | None:intergenic |
| GCTGAATGCTTCTATTCCTT+CGG | 0.391782 | 7_1:-27387739 | None:intergenic |
| TGTAAGAGGGAGGACAAGAA+GGG | 0.397476 | 7_1:+27387952 | Msa1015250:CDS |
| GAGAAACCAGGAAATAATAC+TGG | 0.403836 | 7_1:+27387793 | Msa1015250:CDS |
| TCCACCACAACCAATTGTTC+TGG | 0.404487 | 7_1:+27386492 | Msa1015250:CDS |
| ACATCCTTCGATCTCTATTA+CGG | 0.407073 | 7_1:-27388132 | None:intergenic |
| AGGAAGTAAAGTAGGAGAAA+AGG | 0.414168 | 7_1:+27386830 | Msa1015250:CDS |
| TCATCAAGATCCAGAACAAT+TGG | 0.414953 | 7_1:-27386502 | None:intergenic |
| CATAGTGATGGATATCTTAA+CGG | 0.426125 | 7_1:-27385781 | None:intergenic |
| CTGCTGCTGCTATGGCTGGT+TGG | 0.431944 | 7_1:+27386078 | Msa1015250:CDS |
| TCATCATCAATAAGTGTAAG+AGG | 0.433883 | 7_1:+27387938 | Msa1015250:CDS |
| TGATGATGAGGATGCTGAAT+TGG | 0.437088 | 7_1:+27387817 | Msa1015250:CDS |
| TTAGAATCTCGATCTCGATC+AGG | 0.437867 | 7_1:-27386146 | None:intergenic |
| AGGATGCTGAATTGGCTAGA+AGG | 0.444958 | 7_1:+27387825 | Msa1015250:CDS |
| ATCTTAACGGCTATATTTCG+AGG | 0.462068 | 7_1:-27385768 | None:intergenic |
| CAAATGCAGCATCTTCATCT+TGG | 0.463007 | 7_1:-27387985 | None:intergenic |
| CAGTGTGTGTAAGAGAAGAA+AGG | 0.466606 | 7_1:-27385887 | None:intergenic |
| AAATCTGCTGCTGCTATGGC+TGG | 0.467802 | 7_1:+27386074 | Msa1015250:CDS |
| AGAAAAGGAATTGATTCAGA+AGG | 0.468886 | 7_1:+27386845 | Msa1015250:CDS |
| TATTAGCTAGAGCAAATTTG+AGG | 0.469469 | 7_1:+27388083 | Msa1015250:CDS |
| GTTAATGAAGGAAGTAAAGT+AGG | 0.469630 | 7_1:+27386822 | Msa1015250:CDS |
| TCGACAACAATGAGGGTTCA+TGG | 0.470756 | 7_1:+27387890 | Msa1015250:CDS |
| TGCTCTAGCTAATAAATTGG+AGG | 0.471437 | 7_1:-27388074 | None:intergenic |
| ATTCAAATCTGCTGCTGCTA+TGG | 0.473535 | 7_1:+27386070 | Msa1015250:CDS |
| TGTTTAGGAAACGCAGAGCC+AGG | 0.476804 | 7_1:+27386467 | Msa1015250:intron |
| TGACCACAAGGAGTGGTACT+TGG | 0.499092 | 7_1:-27387064 | None:intergenic |
| ATTAGCTAGAGCAAATTTGA+GGG | 0.507287 | 7_1:+27388084 | Msa1015250:CDS |
| TCTCTTAGCTTATCCATACA+AGG | 0.507539 | 7_1:-27386909 | None:intergenic |
| ATTGTTCTGGATCTTGATGA+AGG | 0.508146 | 7_1:+27386505 | Msa1015250:CDS |
| ATTCAAACTAATTCGACCGT+TGG | 0.508699 | 7_1:+27385809 | Msa1015250:CDS |
| GGGTTCATGGTGGTAATTCA+AGG | 0.509676 | 7_1:+27387903 | Msa1015250:CDS |
| TAGAGCAAATTTGAGGGCTA+TGG | 0.511096 | 7_1:+27388090 | Msa1015250:CDS |
| TCCAGAACAATTGGTTGTGG+TGG | 0.515128 | 7_1:-27386493 | None:intergenic |
| TAAGAGGGAGGACAAGAAGG+GGG | 0.515962 | 7_1:+27387954 | Msa1015250:CDS |
| TGTAAGAGAAGAAAGGTTAA+CGG | 0.518877 | 7_1:-27385880 | None:intergenic |
| GCAGCAGCAGATTTGAATCT+CGG | 0.519442 | 7_1:-27386065 | None:intergenic |
| TTCCTAGCTTCAATTTCTTG+AGG | 0.521825 | 7_1:-27387641 | None:intergenic |
| TGGAGGAAGATGACTGTGCC+TGG | 0.521867 | 7_1:-27388057 | None:intergenic |
| TACACTTATTGATGATGATG+AGG | 0.524665 | 7_1:-27387933 | None:intergenic |
| AATGATAATTACCTTTCTTG+GGG | 0.530697 | 7_1:-27386534 | None:intergenic |
| TGCTCTAAGGTTGCAAAGAG+AGG | 0.541925 | 7_1:+27388006 | Msa1015250:CDS |
| GTAAGAGAAGAAAGGTTAAC+GGG | 0.542263 | 7_1:-27385879 | None:intergenic |
| GTAAGAGGGAGGACAAGAAG+GGG | 0.546725 | 7_1:+27387953 | Msa1015250:CDS |
| CTCCGCTCTCCAATTCATCA+AGG | 0.547530 | 7_1:+27386201 | Msa1015250:CDS |
| GGCTATGGCAACTAGAGCAA+TGG | 0.550394 | 7_1:+27388105 | Msa1015250:CDS |
| TAGAATCTCGATCTCGATCA+GGG | 0.558922 | 7_1:-27386145 | None:intergenic |
| TTTGAATGATGTCATAGTGA+TGG | 0.563243 | 7_1:-27385793 | None:intergenic |
| TTCAGCCATATCCATCAAGT+AGG | 0.563313 | 7_1:+27387756 | Msa1015250:CDS |
| GTACCACTCCTTGTGGTCAC+AGG | 0.564856 | 7_1:+27387068 | Msa1015250:CDS |
| GAAAAGGAATTGATTCAGAA+GGG | 0.573764 | 7_1:+27386846 | Msa1015250:CDS |
| AGGTTACAAAGAGAACTTGA+TGG | 0.575098 | 7_1:+27387845 | Msa1015250:CDS |
| TTCCTCAAGAAATTGAAGCT+AGG | 0.577378 | 7_1:+27387639 | Msa1015250:CDS |
| AAGAGGGAGGACAAGAAGGG+GGG | 0.581947 | 7_1:+27387955 | Msa1015250:CDS |
| AGATCCAGAACAATTGGTTG+TGG | 0.584303 | 7_1:-27386496 | None:intergenic |
| TCAGCCATATCCATCAAGTA+GGG | 0.584477 | 7_1:+27387757 | Msa1015250:CDS |
| TCTTAACGGCTATATTTCGA+GGG | 0.585450 | 7_1:-27385767 | None:intergenic |
| CATCATCAATAAGTGTAAGA+GGG | 0.598286 | 7_1:+27387939 | Msa1015250:CDS |
| TTATATCTTGCAGCAATGGA+CGG | 0.603170 | 7_1:+27387570 | Msa1015250:intron |
| TGTAATAATAATGACAACAA+GGG | 0.604307 | 7_1:+27388152 | Msa1015250:exon |
| ATGTAATAATAATGACAACA+AGG | 0.607319 | 7_1:+27388151 | Msa1015250:exon |
| TACCTTGATGAATTGGAGAG+CGG | 0.617422 | 7_1:-27386203 | None:intergenic |
| ATTTAATACCTGTGACCACA+AGG | 0.619480 | 7_1:-27387076 | None:intergenic |
| ATGATAATTACCTTTCTTGG+GGG | 0.621971 | 7_1:-27386533 | None:intergenic |
| AATAATACTGGATGATGATG+AGG | 0.630102 | 7_1:+27387805 | Msa1015250:CDS |
| AGTAACAGCGACGAAAATGG+TGG | 0.636577 | 7_1:+27385962 | Msa1015250:CDS |
| TAGAACATCGACAACAATGA+GGG | 0.642760 | 7_1:+27387883 | Msa1015250:CDS |
| GTAATAATAATGACAACAAG+GGG | 0.653214 | 7_1:+27388153 | Msa1015250:exon |
| ATACCTGTGACCACAAGGAG+TGG | 0.653809 | 7_1:-27387071 | None:intergenic |
| GAGCCAAGTACCACTCCTTG+TGG | 0.657194 | 7_1:+27387061 | Msa1015250:CDS |
| TATGAATTCTAGGAGAAACC+AGG | 0.658367 | 7_1:+27387781 | Msa1015250:CDS |
| ATAATAATGACAACAAGGGG+TGG | 0.658840 | 7_1:+27388156 | Msa1015250:exon |
| GTTGTTGATGAACAGATAGT+GGG | 0.665792 | 7_1:+27386772 | Msa1015250:intron |
| GCACTGTGAACACAGTTCTG+TGG | 0.666030 | 7_1:+27387597 | Msa1015250:CDS |
| CATCAATAAGTGTAAGAGGG+AGG | 0.669182 | 7_1:+27387942 | Msa1015250:CDS |
| ATAGAACATCGACAACAATG+AGG | 0.674141 | 7_1:+27387882 | Msa1015250:CDS |
| CAGCCATATCCATCAAGTAG+GGG | 0.675531 | 7_1:+27387758 | Msa1015250:CDS |
| ATCTCCGTAATAGAGATCGA+AGG | 0.690694 | 7_1:+27388128 | Msa1015250:CDS |
| AGCGACGAATAGCCAAAACA+TGG | 0.697063 | 7_1:+27386028 | Msa1015250:CDS |
| AGAATCTCGATCTCGATCAG+GGG | 0.709311 | 7_1:-27386144 | None:intergenic |
| ACAACAATGAGGGTTCATGG+TGG | 0.769812 | 7_1:+27387893 | Msa1015250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTATTAAGAATAT+TGG | + | chr7_1:27386387-27386406 | Msa1015250:intron | 10.0% |
| !!! | AATTAGATTAGTTTAATTAA+TGG | + | chr7_1:27386412-27386431 | Msa1015250:intron | 10.0% |
| !!! | ATTAGATTAGTTTAATTAAT+GGG | + | chr7_1:27386413-27386432 | Msa1015250:intron | 10.0% |
| !! | TAAAAAAAAAAGAGTGAAAA+TGG | + | chr7_1:27385717-27385736 | Msa1015250:five_prime_UTR | 15.0% |
| !!! | GAAAATATATTATTTTCCAA+CGG | - | chr7_1:27385828-27385847 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTGTTGAAGAATT+TGG | + | chr7_1:27386304-27386323 | Msa1015250:intron | 15.0% |
| !!! | ATTTCATTAGTTTTGTTATT+GGG | + | chr7_1:27386330-27386349 | Msa1015250:intron | 15.0% |
| !!! | TGATTTTTTGTGTTAAATAT+TGG | + | chr7_1:27386365-27386384 | Msa1015250:intron | 15.0% |
| !!! | TAATTATCATTAATTTTGAC+TGG | + | chr7_1:27386546-27386565 | Msa1015250:intron | 15.0% |
| !!! | TTTTTAAATTATTATGAGTG+TGG | + | chr7_1:27386647-27386666 | Msa1015250:intron | 15.0% |
| !!! | TTATACTAAAAGTTTTACAT+AGG | + | chr7_1:27387142-27387161 | Msa1015250:intron | 15.0% |
| !! | ACAAAACATCAAATTCAAAT+GGG | - | chr7_1:27386268-27386287 | None:intergenic | 20.0% |
| !! | AACAAAACATCAAATTCAAA+TGG | - | chr7_1:27386269-27386288 | None:intergenic | 20.0% |
| !!! | TTTGAATTTGATGTTTTGTT+TGG | + | chr7_1:27386269-27386288 | Msa1015250:intron | 20.0% |
| !!! | GATTTCATTAGTTTTGTTAT+TGG | + | chr7_1:27386329-27386348 | Msa1015250:intron | 20.0% |
| !!! | TGAATTGTTATTTTGTGTTT+AGG | + | chr7_1:27386452-27386471 | Msa1015250:intron | 20.0% |
| !! | TAATGATAATTACCTTTCTT+GGG | - | chr7_1:27386538-27386557 | None:intergenic | 20.0% |
| !! | TTAATGATAATTACCTTTCT+TGG | - | chr7_1:27386539-27386558 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGTGTTAATGA+AGG | + | chr7_1:27386810-27386829 | Msa1015250:CDS | 20.0% |
| !!! | ACTTTTAGTATAACTTCAAT+CGG | - | chr7_1:27387135-27387154 | None:intergenic | 20.0% |
| !! | TCATACAAAATCAATTAGAT+CGG | - | chr7_1:27387170-27387189 | None:intergenic | 20.0% |
| !! | AATTAAATGACATATAAGCA+AGG | + | chr7_1:27387335-27387354 | Msa1015250:intron | 20.0% |
| !! | ATTGCAGTATACATATAATT+AGG | - | chr7_1:27387475-27387494 | None:intergenic | 20.0% |
| !! | TTTGTTCAACAATATCATAT+TGG | + | chr7_1:27387518-27387537 | Msa1015250:intron | 20.0% |
| !! | ATGTAATAATAATGACAACA+AGG | + | chr7_1:27388151-27388170 | Msa1015250:exon | 20.0% |
| !! | TGTAATAATAATGACAACAA+GGG | + | chr7_1:27388152-27388171 | Msa1015250:exon | 20.0% |
| !! | TTTAATTAATGGGTCGATTT+GGG | + | chr7_1:27386423-27386442 | Msa1015250:intron | 25.0% |
| ! | AATGATAATTACCTTTCTTG+GGG | - | chr7_1:27386537-27386556 | None:intergenic | 25.0% |
| ! | TGATTCCTAAATTTCTGATT+TGG | + | chr7_1:27387192-27387211 | Msa1015250:intron | 25.0% |
| !!! | ATAAGCAAGGTTTTAAATTC+CGG | + | chr7_1:27387348-27387367 | Msa1015250:intron | 25.0% |
| ! | AAAATTATATCTTGCAGCAA+TGG | + | chr7_1:27387566-27387585 | Msa1015250:intron | 25.0% |
| !!! | TTATTGTAAAATGCTGTTTC+TGG | - | chr7_1:27387719-27387738 | None:intergenic | 25.0% |
| ! | ATTTGCTCTAGCTAATAAAT+TGG | - | chr7_1:27388080-27388099 | None:intergenic | 25.0% |
| ! | GTAATAATAATGACAACAAG+GGG | + | chr7_1:27388153-27388172 | Msa1015250:exon | 25.0% |
| !! | CATAGTGATGGATATCTTAA+CGG | - | chr7_1:27385784-27385803 | None:intergenic | 30.0% |
| TTTGAATGATGTCATAGTGA+TGG | - | chr7_1:27385796-27385815 | None:intergenic | 30.0% | |
| TGTAAGAGAAGAAAGGTTAA+CGG | - | chr7_1:27385883-27385902 | None:intergenic | 30.0% | |
| !!! | GTTATTGGTTCTTGTTGTTT+TGG | - | chr7_1:27385924-27385943 | None:intergenic | 30.0% |
| TCATGATTACCTTGATGAAT+TGG | - | chr7_1:27386213-27386232 | None:intergenic | 30.0% | |
| !!! | GTTTTGTTATTGGGTTGATT+TGG | + | chr7_1:27386339-27386358 | Msa1015250:intron | 30.0% |
| ! | GTTTAATTAATGGGTCGATT+TGG | + | chr7_1:27386422-27386441 | Msa1015250:intron | 30.0% |
| ATGATAATTACCTTTCTTGG+GGG | - | chr7_1:27386536-27386555 | None:intergenic | 30.0% | |
| !!! | TAATTTTGACTGGTCTGATT+AGG | + | chr7_1:27386556-27386575 | Msa1015250:intron | 30.0% |
| GTTAATGAAGGAAGTAAAGT+AGG | + | chr7_1:27386822-27386841 | Msa1015250:CDS | 30.0% | |
| ! | AGAAAAGGAATTGATTCAGA+AGG | + | chr7_1:27386845-27386864 | Msa1015250:CDS | 30.0% |
| ! | GAAAAGGAATTGATTCAGAA+GGG | + | chr7_1:27386846-27386865 | Msa1015250:CDS | 30.0% |
| ATTGGCCAAATCAGAAATTT+AGG | - | chr7_1:27387200-27387219 | None:intergenic | 30.0% | |
| TTTCTACAAAAGCTGCAAAT+TGG | - | chr7_1:27387218-27387237 | None:intergenic | 30.0% | |
| CTTATCAATTGTCTGCATTT+AGG | - | chr7_1:27387281-27387300 | None:intergenic | 30.0% | |
| CTAAATGCAGACAATTGATA+AGG | + | chr7_1:27387279-27387298 | Msa1015250:intron | 30.0% | |
| !! | GCAGCAATTTCCATTTTAAT+GGG | + | chr7_1:27387430-27387449 | Msa1015250:intron | 30.0% |
| !! | CAGCAATTTCCATTTTAATG+GGG | + | chr7_1:27387431-27387450 | Msa1015250:intron | 30.0% |
| CTTCAATTTCTTGAGGAAAT+AGG | - | chr7_1:27387637-27387656 | None:intergenic | 30.0% | |
| ! | TGCTGCTTCTCTAATATTTA+AGG | - | chr7_1:27387681-27387700 | None:intergenic | 30.0% |
| !! | TAAAATGCTGTTTCTGGAAT+TGG | - | chr7_1:27387713-27387732 | None:intergenic | 30.0% |
| ! | AATAATACTGGATGATGATG+AGG | + | chr7_1:27387805-27387824 | Msa1015250:CDS | 30.0% |
| !! | TACACTTATTGATGATGATG+AGG | - | chr7_1:27387936-27387955 | None:intergenic | 30.0% |
| TCATCATCAATAAGTGTAAG+AGG | + | chr7_1:27387938-27387957 | Msa1015250:CDS | 30.0% | |
| CATCATCAATAAGTGTAAGA+GGG | + | chr7_1:27387939-27387958 | Msa1015250:CDS | 30.0% | |
| TATTAGCTAGAGCAAATTTG+AGG | + | chr7_1:27388083-27388102 | Msa1015250:CDS | 30.0% | |
| ATTAGCTAGAGCAAATTTGA+GGG | + | chr7_1:27388084-27388103 | Msa1015250:CDS | 30.0% | |
| TCTTAACGGCTATATTTCGA+GGG | - | chr7_1:27385770-27385789 | None:intergenic | 35.0% | |
| ATCTTAACGGCTATATTTCG+AGG | - | chr7_1:27385771-27385790 | None:intergenic | 35.0% | |
| ATTCAAACTAATTCGACCGT+TGG | + | chr7_1:27385809-27385828 | Msa1015250:CDS | 35.0% | |
| GTAAGAGAAGAAAGGTTAAC+GGG | - | chr7_1:27385882-27385901 | None:intergenic | 35.0% | |
| TCGCAAACGAACAATGTTAT+TGG | - | chr7_1:27385939-27385958 | None:intergenic | 35.0% | |
| !! | TATTCGTCGCTGTTTTCTTT+CGG | - | chr7_1:27386019-27386038 | None:intergenic | 35.0% |
| !! | AGGGGTATCTTCAACAATTA+GGG | - | chr7_1:27386129-27386148 | None:intergenic | 35.0% |
| TCATCAAGATCCAGAACAAT+TGG | - | chr7_1:27386505-27386524 | None:intergenic | 35.0% | |
| ! | ATTGTTCTGGATCTTGATGA+AGG | + | chr7_1:27386505-27386524 | Msa1015250:CDS | 35.0% |
| ! | TGTTGTTGATGAACAGATAG+TGG | + | chr7_1:27386771-27386790 | Msa1015250:intron | 35.0% |
| ! | GTTGTTGATGAACAGATAGT+GGG | + | chr7_1:27386772-27386791 | Msa1015250:intron | 35.0% |
| AGGAAGTAAAGTAGGAGAAA+AGG | + | chr7_1:27386830-27386849 | Msa1015250:CDS | 35.0% | |
| TCTCTTAGCTTATCCATACA+AGG | - | chr7_1:27386912-27386931 | None:intergenic | 35.0% | |
| ATTTAATACCTGTGACCACA+AGG | - | chr7_1:27387079-27387098 | None:intergenic | 35.0% | |
| ! | GGCAGCAATTTCCATTTTAA+TGG | + | chr7_1:27387429-27387448 | Msa1015250:intron | 35.0% |
| TTATATCTTGCAGCAATGGA+CGG | + | chr7_1:27387570-27387589 | Msa1015250:intron | 35.0% | |
| TTCCTCAAGAAATTGAAGCT+AGG | + | chr7_1:27387639-27387658 | Msa1015250:CDS | 35.0% | |
| TTCCTAGCTTCAATTTCTTG+AGG | - | chr7_1:27387644-27387663 | None:intergenic | 35.0% | |
| ! | CAGCATTTTACAATAACCGA+AGG | + | chr7_1:27387723-27387742 | Msa1015250:CDS | 35.0% |
| ! | TATGAATTCTAGGAGAAACC+AGG | + | chr7_1:27387781-27387800 | Msa1015250:CDS | 35.0% |
| GAGAAACCAGGAAATAATAC+TGG | + | chr7_1:27387793-27387812 | Msa1015250:CDS | 35.0% | |
| CATCATCCAGTATTATTTCC+TGG | - | chr7_1:27387802-27387821 | None:intergenic | 35.0% | |
| AGGTTACAAAGAGAACTTGA+TGG | + | chr7_1:27387845-27387864 | Msa1015250:CDS | 35.0% | |
| TCATTGTTGTCGATGTTCTA+TGG | - | chr7_1:27387883-27387902 | None:intergenic | 35.0% | |
| ATAGAACATCGACAACAATG+AGG | + | chr7_1:27387882-27387901 | Msa1015250:CDS | 35.0% | |
| TAGAACATCGACAACAATGA+GGG | + | chr7_1:27387883-27387902 | Msa1015250:CDS | 35.0% | |
| TGCTCTAGCTAATAAATTGG+AGG | - | chr7_1:27388077-27388096 | None:intergenic | 35.0% | |
| ACATCCTTCGATCTCTATTA+CGG | - | chr7_1:27388135-27388154 | None:intergenic | 35.0% | |
| ATAATAATGACAACAAGGGG+TGG | + | chr7_1:27388156-27388175 | Msa1015250:exon | 35.0% | |
| CGGGTGAAGAAAAAAAGACT+GGG | - | chr7_1:27385863-27385882 | None:intergenic | 40.0% | |
| ACGGGTGAAGAAAAAAAGAC+TGG | - | chr7_1:27385864-27385883 | None:intergenic | 40.0% | |
| CAGTGTGTGTAAGAGAAGAA+AGG | - | chr7_1:27385890-27385909 | None:intergenic | 40.0% | |
| ATTCAAATCTGCTGCTGCTA+TGG | + | chr7_1:27386070-27386089 | Msa1015250:CDS | 40.0% | |
| !! | CAGGGGTATCTTCAACAATT+AGG | - | chr7_1:27386130-27386149 | None:intergenic | 40.0% |
| TAGAATCTCGATCTCGATCA+GGG | - | chr7_1:27386148-27386167 | None:intergenic | 40.0% | |
| TTAGAATCTCGATCTCGATC+AGG | - | chr7_1:27386149-27386168 | None:intergenic | 40.0% | |
| TACCTTGATGAATTGGAGAG+CGG | - | chr7_1:27386206-27386225 | None:intergenic | 40.0% | |
| AGATCCAGAACAATTGGTTG+TGG | - | chr7_1:27386499-27386518 | None:intergenic | 40.0% | |
| ATATGTGTCTGAGTCAGACA+CGG | - | chr7_1:27386606-27386625 | None:intergenic | 40.0% | |
| GATTTCAACGTATCTGCAAC+CGG | - | chr7_1:27387370-27387389 | None:intergenic | 40.0% | |
| ! | GCGCAAGTTTTGCAATACAA+AGG | - | chr7_1:27387392-27387411 | None:intergenic | 40.0% |
| CAACTGCAACCCCATTAAAA+TGG | - | chr7_1:27387443-27387462 | None:intergenic | 40.0% | |
| GCTGAATGCTTCTATTCCTT+CGG | - | chr7_1:27387742-27387761 | None:intergenic | 40.0% | |
| TTCAGCCATATCCATCAAGT+AGG | + | chr7_1:27387756-27387775 | Msa1015250:CDS | 40.0% | |
| TCAGCCATATCCATCAAGTA+GGG | + | chr7_1:27387757-27387776 | Msa1015250:CDS | 40.0% | |
| ! | ATACCCCTACTTGATGGATA+TGG | - | chr7_1:27387764-27387783 | None:intergenic | 40.0% |
| GAATTCATACCCCTACTTGA+TGG | - | chr7_1:27387770-27387789 | None:intergenic | 40.0% | |
| ! | CAAGTAGGGGTATGAATTCT+AGG | + | chr7_1:27387771-27387790 | Msa1015250:CDS | 40.0% |
| ! | TGATGATGAGGATGCTGAAT+TGG | + | chr7_1:27387817-27387836 | Msa1015250:CDS | 40.0% |
| CATCAATAAGTGTAAGAGGG+AGG | + | chr7_1:27387942-27387961 | Msa1015250:CDS | 40.0% | |
| CAAATGCAGCATCTTCATCT+TGG | - | chr7_1:27387988-27388007 | None:intergenic | 40.0% | |
| AAGATGCTGCATTTGCTCTA+AGG | + | chr7_1:27387993-27388012 | Msa1015250:CDS | 40.0% | |
| ! | AGCTTTTACTAGTAGAAGCC+AGG | + | chr7_1:27388039-27388058 | Msa1015250:CDS | 40.0% |
| TAGAGCAAATTTGAGGGCTA+TGG | + | chr7_1:27388090-27388109 | Msa1015250:CDS | 40.0% | |
| ATCTCCGTAATAGAGATCGA+AGG | + | chr7_1:27388128-27388147 | Msa1015250:CDS | 40.0% | |
| GAGAGTAACAGCGACGAAAA+TGG | + | chr7_1:27385959-27385978 | Msa1015250:CDS | 45.0% | |
| AGTAACAGCGACGAAAATGG+TGG | + | chr7_1:27385962-27385981 | Msa1015250:CDS | 45.0% | |
| ! | CTGTTTTCTTTCGGATCACG+GGG | - | chr7_1:27386010-27386029 | None:intergenic | 45.0% |
| !! | GCTGTTTTCTTTCGGATCAC+GGG | - | chr7_1:27386011-27386030 | None:intergenic | 45.0% |
| !! | CGCTGTTTTCTTTCGGATCA+CGG | - | chr7_1:27386012-27386031 | None:intergenic | 45.0% |
| AGCGACGAATAGCCAAAACA+TGG | + | chr7_1:27386028-27386047 | Msa1015250:CDS | 45.0% | |
| ! | TGATGAGCGAAGCCATGTTT+TGG | - | chr7_1:27386043-27386062 | None:intergenic | 45.0% |
| GCAGCAGCAGATTTGAATCT+CGG | - | chr7_1:27386068-27386087 | None:intergenic | 45.0% | |
| AGAATCTCGATCTCGATCAG+GGG | - | chr7_1:27386147-27386166 | None:intergenic | 45.0% | |
| !! | AATTGGTTGTGGTGGATTCC+TGG | - | chr7_1:27386488-27386507 | None:intergenic | 45.0% |
| TCCACCACAACCAATTGTTC+TGG | + | chr7_1:27386492-27386511 | Msa1015250:CDS | 45.0% | |
| TCCAGAACAATTGGTTGTGG+TGG | - | chr7_1:27386496-27386515 | None:intergenic | 45.0% | |
| ATACGACACAGACACAGACA+CGG | - | chr7_1:27386679-27386698 | None:intergenic | 45.0% | |
| ACAGACACAGACTCAAACAC+AGG | - | chr7_1:27386702-27386721 | None:intergenic | 45.0% | |
| TTCTGCTGCTCTTCCTTGTA+TGG | + | chr7_1:27386896-27386915 | Msa1015250:CDS | 45.0% | |
| AGATCTGCTGCAGACAAATG+TGG | + | chr7_1:27387245-27387264 | Msa1015250:intron | 45.0% | |
| CAGCCATATCCATCAAGTAG+GGG | + | chr7_1:27387758-27387777 | Msa1015250:CDS | 45.0% | |
| AGGATGCTGAATTGGCTAGA+AGG | + | chr7_1:27387825-27387844 | Msa1015250:CDS | 45.0% | |
| TCGACAACAATGAGGGTTCA+TGG | + | chr7_1:27387890-27387909 | Msa1015250:CDS | 45.0% | |
| ACAACAATGAGGGTTCATGG+TGG | + | chr7_1:27387893-27387912 | Msa1015250:CDS | 45.0% | |
| GGGTTCATGGTGGTAATTCA+AGG | + | chr7_1:27387903-27387922 | Msa1015250:CDS | 45.0% | |
| TGTAAGAGGGAGGACAAGAA+GGG | + | chr7_1:27387952-27387971 | Msa1015250:CDS | 45.0% | |
| !! | TGCTCTAAGGTTGCAAAGAG+AGG | + | chr7_1:27388006-27388025 | Msa1015250:CDS | 45.0% |
| AAATCTGCTGCTGCTATGGC+TGG | + | chr7_1:27386074-27386093 | Msa1015250:CDS | 50.0% | |
| CTCCGCTCTCCAATTCATCA+AGG | + | chr7_1:27386201-27386220 | Msa1015250:CDS | 50.0% | |
| TGTTTAGGAAACGCAGAGCC+AGG | + | chr7_1:27386467-27386486 | Msa1015250:intron | 50.0% | |
| GAAGGAGAAACCCCCAAGAA+AGG | + | chr7_1:27386523-27386542 | Msa1015250:CDS | 50.0% | |
| TGACCACAAGGAGTGGTACT+TGG | - | chr7_1:27387067-27387086 | None:intergenic | 50.0% | |
| ATACCTGTGACCACAAGGAG+TGG | - | chr7_1:27387074-27387093 | None:intergenic | 50.0% | |
| CAAAACTTGCGCACAAGCGT+GGG | + | chr7_1:27387400-27387419 | Msa1015250:intron | 50.0% | |
| GCACTGTGAACACAGTTCTG+TGG | + | chr7_1:27387597-27387616 | Msa1015250:CDS | 50.0% | |
| GTGTAAGAGGGAGGACAAGA+AGG | + | chr7_1:27387951-27387970 | Msa1015250:CDS | 50.0% | |
| GTAAGAGGGAGGACAAGAAG+GGG | + | chr7_1:27387953-27387972 | Msa1015250:CDS | 50.0% | |
| TAAGAGGGAGGACAAGAAGG+GGG | + | chr7_1:27387954-27387973 | Msa1015250:CDS | 50.0% | |
| GGCTATGGCAACTAGAGCAA+TGG | + | chr7_1:27388105-27388124 | Msa1015250:CDS | 50.0% | |
| ! | TGCTGCTGCTATGGCTGGTT+GGG | + | chr7_1:27386079-27386098 | Msa1015250:CDS | 55.0% |
| GATTAGGCGTGTCCCAGTGT+CGG | + | chr7_1:27386572-27386591 | Msa1015250:intron | 55.0% | |
| GAGCCAAGTACCACTCCTTG+TGG | + | chr7_1:27387061-27387080 | Msa1015250:CDS | 55.0% | |
| GTACCACTCCTTGTGGTCAC+AGG | + | chr7_1:27387068-27387087 | Msa1015250:CDS | 55.0% | |
| GCAAAACTTGCGCACAAGCG+TGG | + | chr7_1:27387399-27387418 | Msa1015250:intron | 55.0% | |
| AAGAGGGAGGACAAGAAGGG+GGG | + | chr7_1:27387955-27387974 | Msa1015250:CDS | 55.0% | |
| AGGACAAGAAGGGGGGTTTC+AGG | + | chr7_1:27387962-27387981 | Msa1015250:CDS | 55.0% | |
| TGGAGGAAGATGACTGTGCC+TGG | - | chr7_1:27388060-27388079 | None:intergenic | 55.0% | |
| CTGCTGCTGCTATGGCTGGT+TGG | + | chr7_1:27386078-27386097 | Msa1015250:CDS | 60.0% | |
| ACGGATGCGTGTCCGACACT+GGG | - | chr7_1:27386587-27386606 | None:intergenic | 60.0% | |
| CACGGATGCGTGTCCGACAC+TGG | - | chr7_1:27386588-27386607 | None:intergenic | 65.0% | |
| GCGCACAAGCGTGGGCGATG+TGG | + | chr7_1:27387408-27387427 | Msa1015250:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 27385679 | 27388296 | 27385679 | ID=Msa1015250;Name=Msa1015250 |
| chr7_1 | mRNA | 27385679 | 27388296 | 27385679 | ID=Msa1015250-mRNA-1;Parent=Msa1015250;Name=Msa1015250-mRNA-1;_AED=0.21;_eAED=0.21;_QI=122|0.75|1|1|1|1|5|140|425 |
| chr7_1 | exon | 27385679 | 27386222 | 27385679 | ID=Msa1015250-mRNA-1:exon:5818;Parent=Msa1015250-mRNA-1 |
| chr7_1 | exon | 27386474 | 27386544 | 27386474 | ID=Msa1015250-mRNA-1:exon:5819;Parent=Msa1015250-mRNA-1 |
| chr7_1 | exon | 27386787 | 27386947 | 27386787 | ID=Msa1015250-mRNA-1:exon:5820;Parent=Msa1015250-mRNA-1 |
| chr7_1 | exon | 27387040 | 27387089 | 27387040 | ID=Msa1015250-mRNA-1:exon:5821;Parent=Msa1015250-mRNA-1 |
| chr7_1 | exon | 27387583 | 27388296 | 27387583 | ID=Msa1015250-mRNA-1:exon:5822;Parent=Msa1015250-mRNA-1 |
| chr7_1 | five_prime_UTR | 27385679 | 27385800 | 27385679 | ID=Msa1015250-mRNA-1:five_prime_utr;Parent=Msa1015250-mRNA-1 |
| chr7_1 | CDS | 27385801 | 27386222 | 27385801 | ID=Msa1015250-mRNA-1:cds;Parent=Msa1015250-mRNA-1 |
| chr7_1 | CDS | 27386474 | 27386544 | 27386474 | ID=Msa1015250-mRNA-1:cds;Parent=Msa1015250-mRNA-1 |
| chr7_1 | CDS | 27386787 | 27386947 | 27386787 | ID=Msa1015250-mRNA-1:cds;Parent=Msa1015250-mRNA-1 |
| chr7_1 | CDS | 27387040 | 27387089 | 27387040 | ID=Msa1015250-mRNA-1:cds;Parent=Msa1015250-mRNA-1 |
| chr7_1 | CDS | 27387583 | 27388156 | 27387583 | ID=Msa1015250-mRNA-1:cds;Parent=Msa1015250-mRNA-1 |
| chr7_1 | three_prime_UTR | 27388157 | 27388296 | 27388157 | ID=Msa1015250-mRNA-1:three_prime_utr;Parent=Msa1015250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
