Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079300 | XP_003625636.2 | 99.545 | 220 | 1 | 0 | 1 | 220 | 1 | 220 | 1.26e-161 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079300 | sp|Q8L8B8|LOG3_ARATH | 87.019 | 208 | 27 | 0 | 1 | 208 | 1 | 208 | 2.40e-135 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079300 | A0A072TU87 | 99.545 | 220 | 1 | 0 | 1 | 220 | 1 | 220 | 6.01e-162 | 455 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003370 | Msa1079300 | 0.815641 | 8.332986e-52 | -8.615850e-47 |
| Msa0030710 | Msa1079300 | 0.831045 | 2.084870e-55 | -8.615850e-47 |
| Msa0032040 | Msa1079300 | 0.819800 | 9.604015e-53 | -8.615850e-47 |
| Msa0034800 | Msa1079300 | 0.829104 | 6.203558e-55 | -8.615850e-47 |
| Msa0035090 | Msa1079300 | 0.820528 | 6.542139e-53 | -8.615850e-47 |
| Msa0040190 | Msa1079300 | 0.803017 | 4.260273e-49 | -8.615850e-47 |
| Msa0047760 | Msa1079300 | 0.809586 | 1.758670e-50 | -8.615850e-47 |
| Msa0050360 | Msa1079300 | 0.803356 | 3.625043e-49 | -8.615850e-47 |
| Msa0050400 | Msa1079300 | 0.808832 | 2.551777e-50 | -8.615850e-47 |
| Msa0050850 | Msa1079300 | 0.845357 | 4.271203e-59 | -8.615850e-47 |
| Msa0059960 | Msa1079300 | -0.807995 | 3.849788e-50 | -8.615850e-47 |
| Msa0083570 | Msa1079300 | 0.822284 | 2.571458e-53 | -8.615850e-47 |
| Msa0089410 | Msa1079300 | 0.835343 | 1.773008e-56 | -8.615850e-47 |
| Msa0092750 | Msa1079300 | 0.809870 | 1.528057e-50 | -8.615850e-47 |
| Msa0094060 | Msa1079300 | 0.837050 | 6.531398e-57 | -8.615850e-47 |
| Msa0096230 | Msa1079300 | 0.803947 | 2.733732e-49 | -8.615850e-47 |
| Msa0114960 | Msa1079300 | 0.807496 | 4.912937e-50 | -8.615850e-47 |
| Msa0619060 | Msa1079300 | 0.817228 | 3.675904e-52 | -8.615850e-47 |
| Msa0619480 | Msa1079300 | 0.853506 | 2.284644e-61 | -8.615850e-47 |
| Msa0622390 | Msa1079300 | 0.800692 | 1.279202e-48 | -8.615850e-47 |
| Msa0622400 | Msa1079300 | 0.814535 | 1.466368e-51 | -8.615850e-47 |
| Msa0624890 | Msa1079300 | 0.832515 | 9.044647e-56 | -8.615850e-47 |
| Msa0626890 | Msa1079300 | 0.833033 | 6.728436e-56 | -8.615850e-47 |
| Msa0641970 | Msa1079300 | 0.828224 | 1.012409e-54 | -8.615850e-47 |
| Msa0659640 | Msa1079300 | 0.853652 | 2.073900e-61 | -8.615850e-47 |
| Msa0665010 | Msa1079300 | 0.848960 | 4.392392e-60 | -8.615850e-47 |
| Msa0681040 | Msa1079300 | 0.832654 | 8.357890e-56 | -8.615850e-47 |
| Msa0698880 | Msa1079300 | 0.816680 | 4.882023e-52 | -8.615850e-47 |
| Msa0704750 | Msa1079300 | 0.839608 | 1.430925e-57 | -8.615850e-47 |
| Msa0705610 | Msa1079300 | 0.809570 | 1.772871e-50 | -8.615850e-47 |
| Msa0707870 | Msa1079300 | 0.827501 | 1.510928e-54 | -8.615850e-47 |
| Msa0714160 | Msa1079300 | 0.802412 | 5.678822e-49 | -8.615850e-47 |
| Msa0718900 | Msa1079300 | 0.805361 | 1.385395e-49 | -8.615850e-47 |
| Msa0721260 | Msa1079300 | -0.804213 | 2.405844e-49 | -8.615850e-47 |
| Msa0736330 | Msa1079300 | 0.847073 | 1.456075e-59 | -8.615850e-47 |
| Msa0743630 | Msa1079300 | 0.817677 | 2.913147e-52 | -8.615850e-47 |
| Msa0778060 | Msa1079300 | 0.860427 | 2.081146e-63 | -8.615850e-47 |
| Msa0795330 | Msa1079300 | -0.806384 | 8.445463e-50 | -8.615850e-47 |
| Msa0821490 | Msa1079300 | 0.825455 | 4.643625e-54 | -8.615850e-47 |
| Msa0824750 | Msa1079300 | 0.819272 | 1.266936e-52 | -8.615850e-47 |
| Msa0123940 | Msa1079300 | 0.813438 | 2.559893e-51 | -8.615850e-47 |
| Msa0124070 | Msa1079300 | 0.804437 | 2.161624e-49 | -8.615850e-47 |
| Msa0130120 | Msa1079300 | 0.821944 | 3.083325e-53 | -8.615850e-47 |
| Msa0134550 | Msa1079300 | 0.801005 | 1.104399e-48 | -8.615850e-47 |
| Msa0136520 | Msa1079300 | 0.830517 | 2.808827e-55 | -8.615850e-47 |
| Msa0138380 | Msa1079300 | 0.811232 | 7.760685e-51 | -8.615850e-47 |
| Msa0143360 | Msa1079300 | 0.814370 | 1.594893e-51 | -8.615850e-47 |
| Msa0146570 | Msa1079300 | 0.814637 | 1.392370e-51 | -8.615850e-47 |
| Msa0170640 | Msa1079300 | 0.811780 | 5.900137e-51 | -8.615850e-47 |
| Msa0187560 | Msa1079300 | 0.803808 | 2.921653e-49 | -8.615850e-47 |
| Msa0201910 | Msa1079300 | 0.830914 | 2.245196e-55 | -8.615850e-47 |
| Msa0206600 | Msa1079300 | 0.822981 | 1.770371e-53 | -8.615850e-47 |
| Msa0207220 | Msa1079300 | 0.869942 | 2.121415e-66 | -8.615850e-47 |
| Msa0207530 | Msa1079300 | 0.805498 | 1.296563e-49 | -8.615850e-47 |
| Msa0207900 | Msa1079300 | 0.802555 | 5.307181e-49 | -8.615850e-47 |
| Msa0207990 | Msa1079300 | 0.806631 | 7.491121e-50 | -8.615850e-47 |
| Msa0221880 | Msa1079300 | 0.824836 | 6.504585e-54 | -8.615850e-47 |
| Msa0224700 | Msa1079300 | 0.846916 | 1.607422e-59 | -8.615850e-47 |
| Msa0370510 | Msa1079300 | 0.832678 | 8.241012e-56 | -8.615850e-47 |
| Msa0377460 | Msa1079300 | 0.810220 | 1.284465e-50 | -8.615850e-47 |
| Msa0379900 | Msa1079300 | 0.809424 | 1.905717e-50 | -8.615850e-47 |
| Msa0385400 | Msa1079300 | 0.801772 | 7.691568e-49 | -8.615850e-47 |
| Msa0386390 | Msa1079300 | 0.800483 | 1.411255e-48 | -8.615850e-47 |
| Msa0426860 | Msa1079300 | 0.810911 | 9.107658e-51 | -8.615850e-47 |
| Msa0426890 | Msa1079300 | 0.813957 | 1.967958e-51 | -8.615850e-47 |
| Msa0429100 | Msa1079300 | 0.801694 | 7.978689e-49 | -8.615850e-47 |
| Msa0475830 | Msa1079300 | 0.809591 | 1.754100e-50 | -8.615850e-47 |
| Msa0479790 | Msa1079300 | 0.802882 | 4.542878e-49 | -8.615850e-47 |
| Msa0481580 | Msa1079300 | 0.820017 | 8.563027e-53 | -8.615850e-47 |
| Msa0481620 | Msa1079300 | 0.809809 | 1.574672e-50 | -8.615850e-47 |
| Msa0981300 | Msa1079300 | 0.800241 | 1.580415e-48 | -8.615850e-47 |
| Msa0997550 | Msa1079300 | 0.814456 | 1.526717e-51 | -8.615850e-47 |
| Msa1038420 | Msa1079300 | 0.816082 | 6.641975e-52 | -8.615850e-47 |
| Msa1041620 | Msa1079300 | 0.858399 | 8.463118e-63 | -8.615850e-47 |
| Msa1042380 | Msa1079300 | 0.813355 | 2.669544e-51 | -8.615850e-47 |
| Msa1069600 | Msa1079300 | 0.989107 | 1.006014e-176 | -8.615850e-47 |
| Msa1079300 | Msa1081650 | 0.838226 | 3.260445e-57 | -8.615850e-47 |
| Msa1079300 | Msa1101480 | 0.815910 | 7.258168e-52 | -8.615850e-47 |
| Msa1079300 | Msa1125100 | 0.812221 | 4.727405e-51 | -8.615850e-47 |
| Msa1079300 | Msa1125150 | 0.812327 | 4.483444e-51 | -8.615850e-47 |
| Msa1079300 | Msa1129130 | 0.801978 | 6.976429e-49 | -8.615850e-47 |
| Msa1079300 | Msa1129470 | 0.808114 | 3.630183e-50 | -8.615850e-47 |
| Msa1079300 | Msa1130700 | 0.810052 | 1.395830e-50 | -8.615850e-47 |
| Msa1079300 | Msa1166520 | 0.857578 | 1.484131e-62 | -8.615850e-47 |
| Msa1079300 | Msa1168770 | 0.903245 | 4.233553e-79 | -8.615850e-47 |
| Msa1079300 | Msa1168840 | 0.924843 | 4.097081e-90 | -8.615850e-47 |
| Msa1079300 | Msa1173410 | 0.805265 | 1.450864e-49 | -8.615850e-47 |
| Msa1079300 | Msa1175820 | 0.800701 | 1.273996e-48 | -8.615850e-47 |
| Msa1079300 | Msa1178470 | 0.834399 | 3.064722e-56 | -8.615850e-47 |
| Msa1079300 | Msa1198280 | 0.827981 | 1.158516e-54 | -8.615850e-47 |
| Msa1079300 | Msa1208070 | 0.857868 | 1.217106e-62 | -8.615850e-47 |
| Msa1079300 | Msa1208510 | 0.814751 | 1.313746e-51 | -8.615850e-47 |
| Msa1079300 | Msa1209900 | 0.852506 | 4.414837e-61 | -8.615850e-47 |
| Msa1079300 | Msa1209960 | 0.837678 | 4.509921e-57 | -8.615850e-47 |
| Msa1079300 | Msa1211100 | 0.834248 | 3.344752e-56 | -8.615850e-47 |
| Msa1079300 | Msa1211120 | 0.846964 | 1.560256e-59 | -8.615850e-47 |
| Msa1079300 | Msa1211880 | 0.806906 | 6.550159e-50 | -8.615850e-47 |
| Msa1079300 | Msa1213170 | 0.845297 | 4.433801e-59 | -8.615850e-47 |
| Msa1079300 | Msa1227090 | 0.836051 | 1.173730e-56 | -8.615850e-47 |
| Msa1079300 | Msa1232860 | 0.827351 | 1.641629e-54 | -8.615850e-47 |
| Msa1079300 | Msa1245300 | 0.840368 | 9.070206e-58 | -8.615850e-47 |
| Msa1079300 | Msa1251960 | 0.853513 | 2.274142e-61 | -8.615850e-47 |
| Msa1079300 | Msa1252040 | 0.820102 | 8.191796e-53 | -8.615850e-47 |
| Msa1079300 | Msa1254770 | 0.804735 | 1.872767e-49 | -8.615850e-47 |
| Msa1079300 | Msa1254800 | 0.810768 | 9.779302e-51 | -8.615850e-47 |
| Msa1079300 | Msa1256280 | 0.843862 | 1.079461e-58 | -8.615850e-47 |
| Msa1079300 | Msa1259350 | 0.827436 | 1.566352e-54 | -8.615850e-47 |
| Msa1079300 | Msa1261340 | 0.801487 | 8.799530e-49 | -8.615850e-47 |
| Msa1079300 | Msa1264230 | 0.821813 | 3.307633e-53 | -8.615850e-47 |
| Msa1079300 | Msa1267800 | 0.807746 | 4.348536e-50 | -8.615850e-47 |
| Msa1079300 | Msa1275290 | 0.847863 | 8.835934e-60 | -8.615850e-47 |
| Msa1079300 | Msa1298450 | 0.839421 | 1.600603e-57 | -8.615850e-47 |
| Msa1079300 | Msa1300120 | 0.828811 | 7.305408e-55 | -8.615850e-47 |
| Msa1079300 | Msa1302920 | 0.827635 | 1.402832e-54 | -8.615850e-47 |
| Msa1079300 | Msa1328310 | 0.839946 | 1.168911e-57 | -8.615850e-47 |
| Msa1079300 | Msa1336320 | 0.801048 | 1.081841e-48 | -8.615850e-47 |
| Msa1079300 | Msa1343540 | 0.856518 | 3.047797e-62 | -8.615850e-47 |
| Msa1079300 | Msa1351560 | 0.829405 | 5.243493e-55 | -8.615850e-47 |
| Msa1079300 | Msa1357760 | 0.844412 | 7.681312e-59 | -8.615850e-47 |
| Msa1079300 | Msa1361090 | 0.804482 | 2.115344e-49 | -8.615850e-47 |
| Msa1079300 | Msa1369860 | 0.816370 | 5.726642e-52 | -8.615850e-47 |
| Msa1079300 | Msa1385940 | 0.812725 | 3.668821e-51 | -8.615850e-47 |
| Msa1079300 | Msa1392990 | 0.802267 | 6.084173e-49 | -8.615850e-47 |
| Msa1079300 | Msa1397550 | 0.833318 | 5.712947e-56 | -8.615850e-47 |
| Msa1079300 | Msa1398110 | -0.800074 | 1.709589e-48 | -8.615850e-47 |
| Msa1079300 | Msa1400600 | 0.818860 | 1.572068e-52 | -8.615850e-47 |
| Msa1079300 | Msa1415120 | 0.804192 | 2.430373e-49 | -8.615850e-47 |
| Msa1079300 | Msa1419040 | 0.815244 | 1.020960e-51 | -8.615850e-47 |
| Msa1079300 | Msa1426870 | 0.801209 | 1.002961e-48 | -8.615850e-47 |
| Msa1079300 | Msa1439160 | 0.807104 | 5.948128e-50 | -8.615850e-47 |
| Msa1079300 | Msa1442300 | 0.809974 | 1.450906e-50 | -8.615850e-47 |
| Msa1079300 | Msa1451780 | 0.807193 | 5.696158e-50 | -8.615850e-47 |
| Msa0240290 | Msa1079300 | 0.811640 | 6.327329e-51 | -8.615850e-47 |
| Msa0240460 | Msa1079300 | 0.813412 | 2.593198e-51 | -8.615850e-47 |
| Msa0244370 | Msa1079300 | 0.821615 | 3.673858e-53 | -8.615850e-47 |
| Msa0253410 | Msa1079300 | 0.847981 | 8.194305e-60 | -8.615850e-47 |
| Msa0263470 | Msa1079300 | 0.826939 | 2.059359e-54 | -8.615850e-47 |
| Msa0265780 | Msa1079300 | 0.835399 | 1.716795e-56 | -8.615850e-47 |
| Msa0282880 | Msa1079300 | 0.838682 | 2.487735e-57 | -8.615850e-47 |
| Msa0288270 | Msa1079300 | 0.870477 | 1.416504e-66 | -8.615850e-47 |
| Msa0288280 | Msa1079300 | 0.865712 | 4.839166e-65 | -8.615850e-47 |
| Msa0295520 | Msa1079300 | 0.825203 | 5.327724e-54 | -8.615850e-47 |
| Msa0296930 | Msa1079300 | -0.807063 | 6.070601e-50 | -8.615850e-47 |
| Msa0301060 | Msa1079300 | 0.822694 | 2.065646e-53 | -8.615850e-47 |
| Msa0303780 | Msa1079300 | 0.850323 | 1.828555e-60 | -8.615850e-47 |
| Msa0307490 | Msa1079300 | 0.835628 | 1.501784e-56 | -8.615850e-47 |
| Msa0317630 | Msa1079300 | 0.804380 | 2.221406e-49 | -8.615850e-47 |
| Msa0321180 | Msa1079300 | 0.820011 | 8.594329e-53 | -8.615850e-47 |
| Msa0321200 | Msa1079300 | 0.824953 | 6.103631e-54 | -8.615850e-47 |
| Msa0331780 | Msa1079300 | 0.800600 | 1.335481e-48 | -8.615850e-47 |
| Msa0338610 | Msa1079300 | 0.832916 | 7.195135e-56 | -8.615850e-47 |
| Msa0358230 | Msa1079300 | 0.807154 | 5.805317e-50 | -8.615850e-47 |
| Msa0498320 | Msa1079300 | 0.815525 | 8.839340e-52 | -8.615850e-47 |
| Msa0513500 | Msa1079300 | 0.837272 | 5.731715e-57 | -8.615850e-47 |
| Msa0514280 | Msa1079300 | 0.805400 | 1.359783e-49 | -8.615850e-47 |
| Msa0517400 | Msa1079300 | 0.804648 | 1.952764e-49 | -8.615850e-47 |
| Msa0524020 | Msa1079300 | 0.803927 | 2.759840e-49 | -8.615850e-47 |
| Msa0526570 | Msa1079300 | 0.823417 | 1.400685e-53 | -8.615850e-47 |
| Msa0542030 | Msa1079300 | 0.822153 | 2.758002e-53 | -8.615850e-47 |
| Msa0545910 | Msa1079300 | 0.826745 | 2.291510e-54 | -8.615850e-47 |
| Msa0569630 | Msa1079300 | 0.833282 | 5.832890e-56 | -8.615850e-47 |
| Msa0570310 | Msa1079300 | 0.805982 | 1.026174e-49 | -8.615850e-47 |
| Msa0571070 | Msa1079300 | 0.813217 | 2.861871e-51 | -8.615850e-47 |
| Msa0574230 | Msa1079300 | 0.832414 | 9.584448e-56 | -8.615850e-47 |
| Msa0576510 | Msa1079300 | 0.824310 | 8.651018e-54 | -8.615850e-47 |
| Msa0577140 | Msa1079300 | 0.836383 | 9.664535e-57 | -8.615850e-47 |
| Msa0583810 | Msa1079300 | 0.817942 | 2.538336e-52 | -8.615850e-47 |
| Msa0587060 | Msa1079300 | 0.851090 | 1.113131e-60 | -8.615850e-47 |
| Msa0595240 | Msa1079300 | 0.817225 | 3.682846e-52 | -8.615850e-47 |
| Msa0601710 | Msa1079300 | 0.822157 | 2.752270e-53 | -8.615850e-47 |
| Msa0855490 | Msa1079300 | 0.842714 | 2.184116e-58 | -8.615850e-47 |
| Msa0863780 | Msa1079300 | 0.818451 | 1.946477e-52 | -8.615850e-47 |
| Msa0880370 | Msa1079300 | 0.806122 | 9.590898e-50 | -8.615850e-47 |
| Msa0880520 | Msa1079300 | 0.815857 | 7.455542e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079300 | MtrunA17_Chr7g0264181 | 99.545 | 220 | 1 | 0 | 1 | 220 | 1 | 220 | 1.16e-165 | 455 |
| Msa1079300 | MtrunA17_Chr1g0181131 | 94.444 | 216 | 12 | 0 | 5 | 220 | 4 | 219 | 6.55e-156 | 430 |
| Msa1079300 | MtrunA17_Chr2g0326841 | 85.854 | 205 | 29 | 0 | 4 | 208 | 3 | 207 | 4.37e-132 | 370 |
| Msa1079300 | MtrunA17_Chr4g0028871 | 89.119 | 193 | 21 | 0 | 13 | 205 | 12 | 204 | 6.92e-128 | 359 |
| Msa1079300 | MtrunA17_Chr3g0142491 | 77.143 | 210 | 48 | 0 | 11 | 220 | 12 | 221 | 3.15e-122 | 345 |
| Msa1079300 | MtrunA17_Chr1g0177391 | 73.206 | 209 | 54 | 1 | 11 | 219 | 6 | 212 | 2.20e-113 | 323 |
| Msa1079300 | MtrunA17_Chr1g0151201 | 67.157 | 204 | 65 | 1 | 12 | 213 | 7 | 210 | 9.84e-102 | 293 |
| Msa1079300 | MtrunA17_Chr1g0156401 | 65.179 | 112 | 18 | 1 | 41 | 131 | 1 | 112 | 1.10e-43 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079300 | AT2G37210.1 | 87.019 | 208 | 27 | 0 | 1 | 208 | 1 | 208 | 2.44e-136 | 381 |
| Msa1079300 | AT3G53450.1 | 86.058 | 208 | 29 | 0 | 1 | 208 | 1 | 208 | 3.10e-134 | 376 |
| Msa1079300 | AT2G28305.1 | 85.238 | 210 | 30 | 1 | 11 | 220 | 5 | 213 | 1.63e-130 | 366 |
| Msa1079300 | AT2G37210.2 | 77.586 | 232 | 28 | 1 | 1 | 208 | 1 | 232 | 2.40e-130 | 367 |
| Msa1079300 | AT2G28305.3 | 90.503 | 179 | 17 | 0 | 11 | 189 | 5 | 183 | 8.04e-120 | 338 |
| Msa1079300 | AT5G06300.1 | 79.208 | 202 | 42 | 0 | 11 | 212 | 6 | 207 | 2.48e-119 | 338 |
| Msa1079300 | AT5G03270.1 | 83.871 | 186 | 30 | 0 | 11 | 196 | 16 | 201 | 3.61e-113 | 322 |
| Msa1079300 | AT4G35190.1 | 71.921 | 203 | 57 | 0 | 7 | 209 | 2 | 204 | 7.53e-110 | 315 |
| Msa1079300 | AT5G03270.2 | 83.978 | 181 | 29 | 0 | 11 | 191 | 16 | 196 | 2.06e-109 | 312 |
| Msa1079300 | AT2G35990.1 | 72.165 | 194 | 54 | 0 | 11 | 204 | 6 | 199 | 2.52e-108 | 310 |
| Msa1079300 | AT4G35190.2 | 73.575 | 193 | 49 | 1 | 7 | 199 | 2 | 192 | 8.88e-104 | 298 |
| Msa1079300 | AT5G11950.1 | 66.010 | 203 | 69 | 0 | 11 | 213 | 7 | 209 | 1.13e-101 | 293 |
| Msa1079300 | AT5G11950.2 | 66.010 | 203 | 69 | 0 | 11 | 213 | 7 | 209 | 1.13e-101 | 293 |
| Msa1079300 | AT5G11950.3 | 66.010 | 203 | 69 | 0 | 11 | 213 | 7 | 209 | 1.13e-101 | 293 |
| Msa1079300 | AT2G28305.2 | 90.909 | 132 | 12 | 0 | 11 | 142 | 5 | 136 | 4.40e-86 | 252 |
| Msa1079300 | AT2G35990.3 | 71.429 | 147 | 42 | 0 | 58 | 204 | 1 | 147 | 1.89e-78 | 233 |
| Msa1079300 | AT2G35990.2 | 71.429 | 147 | 42 | 0 | 58 | 204 | 1 | 147 | 1.89e-78 | 233 |
| Msa1079300 | AT5G11950.4 | 66.026 | 156 | 53 | 0 | 58 | 213 | 1 | 156 | 7.39e-75 | 224 |
| Msa1079300 | AT5G26140.2 | 52.318 | 151 | 50 | 1 | 85 | 213 | 6 | 156 | 2.30e-47 | 154 |
| Msa1079300 | AT5G26140.1 | 51.095 | 137 | 45 | 1 | 99 | 213 | 1 | 137 | 5.06e-40 | 134 |
| Msa1079300 | AT5G26140.3 | 54.717 | 106 | 48 | 0 | 108 | 213 | 17 | 122 | 8.82e-36 | 123 |
Find 67 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAACATTGATCTTGTTTA+TGG | 0.168735 | 7_2:-78345107 | Msa1079300:CDS |
| GTCATCGCAACAACGGAAAT+TGG | 0.253011 | 7_2:+78341798 | None:intergenic |
| TAATTTACATAAGAAATTAA+AGG | 0.265324 | 7_2:+78342063 | None:intergenic |
| GACCATATGATATAGAATTT+TGG | 0.265482 | 7_2:-78342143 | Msa1079300:three_prime_UTR |
| TTAACTTATGCAGGTGGATA+TGG | 0.277547 | 7_2:-78343054 | Msa1079300:intron |
| ACTAATCAACATTAAATAAT+AGG | 0.279626 | 7_2:+78341935 | None:intergenic |
| ATTTGTTAGTTGGAATAAAA+AGG | 0.292300 | 7_2:+78345898 | None:intergenic |
| CAATTCATTGCCAAGGTTCA+TGG | 0.335336 | 7_2:+78345777 | None:intergenic |
| GCTTTGTTGCTACTACTCTT+TGG | 0.335661 | 7_2:+78346024 | None:intergenic |
| ATAAGTAATTTAACTTTCAT+AGG | 0.351644 | 7_2:+78342024 | None:intergenic |
| ACAATTATGTGACGAGCATT+TGG | 0.366388 | 7_2:+78342788 | None:intergenic |
| TGATGTCATTTGCAGCTAAC+TGG | 0.379211 | 7_2:-78344453 | Msa1079300:intron |
| ACTCACGCAATGGTGAAATA+AGG | 0.394030 | 7_2:-78345873 | Msa1079300:CDS |
| GTTGGATTAGTAAATGTTGA+TGG | 0.409542 | 7_2:-78342869 | Msa1079300:CDS |
| CTCCAAAATTCTATATCATA+TGG | 0.431525 | 7_2:+78342141 | None:intergenic |
| CTCTCGAGGCATGAGTGTCT+TGG | 0.437050 | 7_2:+78344805 | None:intergenic |
| GATGGTGGTCGCCATGTCAT+TGG | 0.439047 | 7_2:-78345038 | Msa1079300:CDS |
| ATTGACAAAGCTGTGGAAGA+AGG | 0.461566 | 7_2:-78342821 | Msa1079300:CDS |
| GCGTGAGTCCATTTGTTAGT+TGG | 0.464138 | 7_2:+78345888 | None:intergenic |
| TCTCGAGGCATGAGTGTCTT+GGG | 0.468747 | 7_2:+78344806 | None:intergenic |
| CATGAACCTTGGCAATGAAT+TGG | 0.469550 | 7_2:-78345776 | Msa1079300:intron |
| TTCCATCTGCCAGCTCAACT+TGG | 0.470523 | 7_2:+78342245 | None:intergenic |
| TTGAGATGTCATAATCTTGA+GGG | 0.471297 | 7_2:+78342208 | None:intergenic |
| GTCATAACATGGGCTCAACT+TGG | 0.475221 | 7_2:-78343009 | Msa1079300:CDS |
| GTTTCTCAAGCTGTTCATGA+TGG | 0.477189 | 7_2:-78345056 | Msa1079300:CDS |
| ATTGATCTTGTTTATGGAGG+AGG | 0.482065 | 7_2:-78345101 | Msa1079300:CDS |
| CAAGGTTCATGGCAGCATCT+TGG | 0.485744 | 7_2:+78345788 | None:intergenic |
| AAAAGAGTTAGTTAAGAAGT+TGG | 0.487121 | 7_2:-78342750 | Msa1079300:CDS |
| AAAGATGAGGATGACTCTTA+AGG | 0.487617 | 7_2:+78341893 | None:intergenic |
| AGGAGGAAGCATTGGTCTCA+TGG | 0.491447 | 7_2:-78345084 | Msa1079300:CDS |
| TGCTAAGTGCCAACCTGGTA+AGG | 0.491656 | 7_2:+78344347 | None:intergenic |
| GTTTATGGAGGAGGAAGCAT+TGG | 0.504128 | 7_2:-78345092 | Msa1079300:CDS |
| GTGTTGCTTCCAAGTTGAGC+TGG | 0.509075 | 7_2:-78342254 | Msa1079300:CDS |
| ATGGTGGTCGCCATGTCATT+GGG | 0.511363 | 7_2:-78345037 | Msa1079300:intron |
| AGAGTTAGTTAAGAAGTTGG+AGG | 0.516344 | 7_2:-78342747 | Msa1079300:intron |
| TTGACAAAGCTGTGGAAGAA+GGG | 0.531943 | 7_2:-78342820 | Msa1079300:CDS |
| AACATTGATCTTGTTTATGG+AGG | 0.533518 | 7_2:-78345104 | Msa1079300:CDS |
| CAAGATGCTGCCATGAACCT+TGG | 0.535202 | 7_2:-78345787 | Msa1079300:CDS |
| CTCAAGATTATGACATCTCA+AGG | 0.546895 | 7_2:-78342206 | Msa1079300:CDS |
| GCATCAAAGGAAAGCTGAGA+TGG | 0.549979 | 7_2:-78344394 | Msa1079300:CDS |
| GGAGGAAGCATTGGTCTCAT+GGG | 0.550392 | 7_2:-78345083 | Msa1079300:CDS |
| ACAGTGAGAGACAAAGATGA+AGG | 0.560050 | 7_2:+78345962 | None:intergenic |
| TACATACCAATTCATTGCCA+AGG | 0.561261 | 7_2:+78345770 | None:intergenic |
| TTCCAAGTTGAGCTGGCAGA+TGG | 0.564883 | 7_2:-78342247 | Msa1079300:CDS |
| CAGCTAACTGGTGAAACAGT+AGG | 0.567165 | 7_2:-78344441 | Msa1079300:CDS |
| CTGTTGCTGATATGCATCAA+AGG | 0.573128 | 7_2:-78344407 | Msa1079300:CDS |
| CTTGAGATGTCATAATCTTG+AGG | 0.576949 | 7_2:+78342207 | None:intergenic |
| TAACAAATGGACTCACGCAA+TGG | 0.580220 | 7_2:-78345883 | Msa1079300:exon |
| TCTCAAGCTGTTCATGATGG+TGG | 0.580895 | 7_2:-78345053 | Msa1079300:CDS |
| CTATGTTTACTTCACTTGCA+AGG | 0.592333 | 7_2:-78342173 | Msa1079300:three_prime_UTR |
| GAAGCAACACCCTCATGACA+TGG | 0.600653 | 7_2:+78342267 | None:intergenic |
| AACTTCTTGAAGTCATAACA+TGG | 0.604120 | 7_2:-78343020 | Msa1079300:CDS |
| CTTGATCAACACAAAAGATG+AGG | 0.611603 | 7_2:+78341880 | None:intergenic |
| ACTTGGAATTCATGACAAGC+CGG | 0.616968 | 7_2:-78342992 | Msa1079300:intron |
| GGAGTATGTTCCATGTCATG+AGG | 0.617100 | 7_2:-78342277 | Msa1079300:CDS |
| GTTCATGGCAGCATCTTGGT+AGG | 0.620771 | 7_2:+78345792 | None:intergenic |
| TACTAGACAAATACCTCTCG+AGG | 0.623010 | 7_2:+78344791 | None:intergenic |
| TGAAACAGTAGGAGAAGTGA+AGG | 0.624185 | 7_2:-78344430 | Msa1079300:CDS |
| CAAGACACTCATGCCTCGAG+AGG | 0.636692 | 7_2:-78344804 | Msa1079300:intron |
| GTCATTCATTGACAAAGCTG+TGG | 0.639783 | 7_2:-78342828 | Msa1079300:CDS |
| GAGTATGTTCCATGTCATGA+GGG | 0.646303 | 7_2:-78342276 | Msa1079300:CDS |
| TGTATTTGTCATCGCAACAA+CGG | 0.652612 | 7_2:+78341791 | None:intergenic |
| TAAAATCAAAGTTTATAACA+AGG | 0.654833 | 7_2:+78341996 | None:intergenic |
| GTGTTATATACCCAATGACA+TGG | 0.655296 | 7_2:+78345027 | None:intergenic |
| AGGTGGATATGGAACTCTAG+AGG | 0.671132 | 7_2:-78343043 | Msa1079300:CDS |
| TTTGTCAATGAATGACAACA+AGG | 0.686987 | 7_2:+78342835 | None:intergenic |
| ACTTCTTGAAGTCATAACAT+GGG | 0.690032 | 7_2:-78343019 | Msa1079300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAATATGAAAATGT+CGG | + | chr7_2:78343595-78343614 | None:intergenic | 10.0% |
| !! | TTTAAAAATGAAAGATAAAA+AGG | + | chr7_2:78343736-78343755 | None:intergenic | 10.0% |
| !!! | TCCAATATTTTATATTTTAA+GGG | + | chr7_2:78344091-78344110 | None:intergenic | 10.0% |
| !!! | AATATTATTTTTTTTGACAA+TGG | + | chr7_2:78345185-78345204 | None:intergenic | 10.0% |
| !! | TTAATTAATAAGTATACAAT+TGG | + | chr7_2:78345466-78345485 | None:intergenic | 10.0% |
| !! | TAATTTACATAAGAAATTAA+AGG | + | chr7_2:78345759-78345778 | None:intergenic | 10.0% |
| !!! | TTAATTTTTTGTTGTTTACT+TGG | - | chr7_2:78343606-78343625 | Msa1079300:intron | 15.0% |
| !!! | TTTTAAAACAACATGATTTA+AGG | + | chr7_2:78343892-78343911 | None:intergenic | 15.0% |
| !!! | ATTTTATATTTTAAGGGATA+AGG | + | chr7_2:78344085-78344104 | None:intergenic | 15.0% |
| !! | TCCCTTAAAATATAAAATAT+TGG | - | chr7_2:78344087-78344106 | Msa1079300:intron | 15.0% |
| !!! | GTCCAATATTTTATATTTTA+AGG | + | chr7_2:78344092-78344111 | None:intergenic | 15.0% |
| !! | ATACTCAAAATAAATTACTT+AGG | + | chr7_2:78344365-78344384 | None:intergenic | 15.0% |
| !! | TTATCATTTATGAATTAATC+TGG | - | chr7_2:78344906-78344925 | Msa1079300:intron | 15.0% |
| !!! | AAGATTTGAAATTAATTTAC+AGG | - | chr7_2:78345521-78345540 | Msa1079300:intron | 15.0% |
| !!! | ATAAGTAATTTAACTTTCAT+AGG | + | chr7_2:78345798-78345817 | None:intergenic | 15.0% |
| !! | TAAAATCAAAGTTTATAACA+AGG | + | chr7_2:78345826-78345845 | None:intergenic | 15.0% |
| !! | ACTAATCAACATTAAATAAT+AGG | + | chr7_2:78345887-78345906 | None:intergenic | 15.0% |
| !!! | TAGTAGTTTTTATATTTAAC+TGG | - | chr7_2:78345903-78345922 | Msa1079300:five_prime_UTR | 15.0% |
| !!! | AAGATTTTAAATTGTTATCA+TGG | - | chr7_2:78345959-78345978 | Msa1079300:five_prime_UTR | 15.0% |
| !! | TAATGAAGAAAAAGAAGAAA+AGG | + | chr7_2:78341836-78341855 | None:intergenic | 20.0% |
| !! | AATAAAAAGGTAACTAACTA+GGG | + | chr7_2:78341911-78341930 | None:intergenic | 20.0% |
| !!! | ATTTGTTAGTTGGAATAAAA+AGG | + | chr7_2:78341924-78341943 | None:intergenic | 20.0% |
| !!! | TTTTTATTCCAACTAACAAA+TGG | - | chr7_2:78341923-78341942 | Msa1079300:three_prime_UTR | 20.0% |
| !!! | ACACTTTGATTAATGTTTTT+GGG | + | chr7_2:78342342-78342361 | None:intergenic | 20.0% |
| !!! | AACACTTTGATTAATGTTTT+TGG | + | chr7_2:78342343-78342362 | None:intergenic | 20.0% |
| !!! | TCCATTTTTGTTTCATATTA+AGG | - | chr7_2:78342379-78342398 | Msa1079300:intron | 20.0% |
| !! | ACCTTAATATGAAACAAAAA+TGG | + | chr7_2:78342383-78342402 | None:intergenic | 20.0% |
| !! | TGTTAATTAATGAGTAAAAG+AGG | + | chr7_2:78342953-78342972 | None:intergenic | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | + | chr7_2:78343065-78343084 | None:intergenic | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | - | chr7_2:78343070-78343089 | Msa1079300:intron | 20.0% |
| !!! | TAAGAAACAATTGACTTTTT+TGG | + | chr7_2:78343157-78343176 | None:intergenic | 20.0% |
| !!! | GTCAATTGTTTCTTATAATA+AGG | - | chr7_2:78343162-78343181 | Msa1079300:intron | 20.0% |
| !! | TTTAATAACAGAAGGTAAAA+GGG | + | chr7_2:78343211-78343230 | None:intergenic | 20.0% |
| !!! | AAAAATGTTGTTTATGTCTT+TGG | - | chr7_2:78343341-78343360 | Msa1079300:intron | 20.0% |
| !!! | GAAACAATTGTTTTTTTCAA+AGG | + | chr7_2:78343571-78343590 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTTGATTTGATT+TGG | - | chr7_2:78343772-78343791 | Msa1079300:intron | 20.0% |
| !! | TCCAATGTTTATGATTAATA+AGG | - | chr7_2:78344003-78344022 | Msa1079300:intron | 20.0% |
| !! | TCCTTATTAATCATAAACAT+TGG | + | chr7_2:78344007-78344026 | None:intergenic | 20.0% |
| !! | TTATATACAAATCATTCCTT+GGG | + | chr7_2:78344474-78344493 | None:intergenic | 20.0% |
| !! | TTTATATACAAATCATTCCT+TGG | + | chr7_2:78344475-78344494 | None:intergenic | 20.0% |
| !! | TACAATTCAGATTATAATCA+TGG | - | chr7_2:78344703-78344722 | Msa1079300:intron | 20.0% |
| ! | GAATAAAAAGGTAACTAACT+AGG | + | chr7_2:78341912-78341931 | None:intergenic | 25.0% |
| !! | AAAAGAATTTGTGTTTTCTG+TGG | - | chr7_2:78341981-78342000 | Msa1079300:three_prime_UTR | 25.0% |
| ! | AACTCACTTATTGAAAAATG+TGG | + | chr7_2:78342143-78342162 | None:intergenic | 25.0% |
| !! | TTTCAATAAGTGAGTTGAAA+TGG | - | chr7_2:78342147-78342166 | Msa1079300:three_prime_UTR | 25.0% |
| !! | AGTGAATTTCAGTTTTTGTA+AGG | - | chr7_2:78342253-78342272 | Msa1079300:CDS | 25.0% |
| ! | AAGGTTATATACTCTGTATT+TGG | - | chr7_2:78342272-78342291 | Msa1079300:CDS | 25.0% |
| ! | TTTGGGCTTAATGTATATAA+TGG | + | chr7_2:78342325-78342344 | None:intergenic | 25.0% |
| !! | TTTTCTTTTCTTTCATCACA+TGG | - | chr7_2:78342571-78342590 | Msa1079300:intron | 25.0% |
| !! | TTTCTTTTCTTTCATCACAT+GGG | - | chr7_2:78342572-78342591 | Msa1079300:intron | 25.0% |
| ! | GAAACAAGAAAACCAAATAA+CGG | + | chr7_2:78342644-78342663 | None:intergenic | 25.0% |
| ! | AGAGAACAAAAATTAACACT+TGG | - | chr7_2:78342895-78342914 | Msa1079300:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | + | chr7_2:78343060-78343079 | None:intergenic | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | - | chr7_2:78343167-78343186 | Msa1079300:intron | 25.0% |
| ! | TTAATAACAGAAGGTAAAAG+GGG | + | chr7_2:78343210-78343229 | None:intergenic | 25.0% |
| ! | CTTTAATAACAGAAGGTAAA+AGG | + | chr7_2:78343212-78343231 | None:intergenic | 25.0% |
| ! | TAGTACACTTTAATAACAGA+AGG | + | chr7_2:78343219-78343238 | None:intergenic | 25.0% |
| ! | TCTAAACATAAGAGAAAATC+AGG | + | chr7_2:78343312-78343331 | None:intergenic | 25.0% |
| ! | TCAAAGTTATTCATTACTTG+TGG | + | chr7_2:78343807-78343826 | None:intergenic | 25.0% |
| ! | TAATTCGTAAACAACTTTCA+TGG | - | chr7_2:78343965-78343984 | Msa1079300:intron | 25.0% |
| !!! | ATTATCAAGTAAGCTTTGAA+GGG | + | chr7_2:78344037-78344056 | None:intergenic | 25.0% |
| !!! | ATATTTTAAGGGATAAGGTA+AGG | + | chr7_2:78344080-78344099 | None:intergenic | 25.0% |
| !! | AACAAAAGTAGTGGAAAAAA+TGG | + | chr7_2:78344167-78344186 | None:intergenic | 25.0% |
| ! | ACTATACTAACTAAATACCA+TGG | - | chr7_2:78344558-78344577 | Msa1079300:intron | 25.0% |
| ! | TATGATATTGTAGAGAATTG+CGG | - | chr7_2:78344611-78344630 | Msa1079300:intron | 25.0% |
| ! | TTGTAACATCAATGTTTGTT+AGG | + | chr7_2:78344688-78344707 | None:intergenic | 25.0% |
| ! | ATTCAGATTATAATCATGGA+TGG | - | chr7_2:78344707-78344726 | Msa1079300:intron | 25.0% |
| !! | TTTTCTGAATTAACTTATGC+AGG | - | chr7_2:78344756-78344775 | Msa1079300:intron | 25.0% |
| ! | AGATATAGATTCCTCAAAAT+TGG | + | chr7_2:78344868-78344887 | None:intergenic | 25.0% |
| ! | GCTTATAATTACAAACTTGT+AGG | - | chr7_2:78344928-78344947 | Msa1079300:intron | 25.0% |
| ! | ATAATTACAAACTTGTAGGT+TGG | - | chr7_2:78344932-78344951 | Msa1079300:intron | 25.0% |
| ! | AAAAGAGTTAGTTAAGAAGT+TGG | - | chr7_2:78345069-78345088 | Msa1079300:CDS | 25.0% |
| !! | TACCTATAGTTTTCTTAGTT+AGG | + | chr7_2:78345110-78345129 | None:intergenic | 25.0% |
| !! | GACCATATGATATAGAATTT+TGG | - | chr7_2:78345676-78345695 | Msa1079300:intron | 25.0% |
| ! | CTCCAAAATTCTATATCATA+TGG | + | chr7_2:78345681-78345700 | None:intergenic | 25.0% |
| !! | CATATGATATAGAATTTTGG+AGG | - | chr7_2:78345679-78345698 | Msa1079300:intron | 25.0% |
| ! | TTTTAGTCCGTACAAATGTT+TGG | + | chr7_2:78342429-78342448 | None:intergenic | 30.0% |
| !!! | TGATGTTGTTTGTTTTGTGA+AGG | - | chr7_2:78342684-78342703 | Msa1079300:intron | 30.0% |
| !!! | TTTGTTTTGTGAAGGTTTCA+AGG | - | chr7_2:78342692-78342711 | Msa1079300:intron | 30.0% |
| ! | AGGAACATTGATCTTGTTTA+TGG | - | chr7_2:78342712-78342731 | Msa1079300:intron | 30.0% |
| ! | AACATTGATCTTGTTTATGG+AGG | - | chr7_2:78342715-78342734 | Msa1079300:intron | 30.0% |
| TCTCTCAAAGTTGTACTATT+TGG | - | chr7_2:78342856-78342875 | Msa1079300:CDS | 30.0% | |
| CTCTCAAAGTTGTACTATTT+GGG | - | chr7_2:78342857-78342876 | Msa1079300:CDS | 30.0% | |
| AAAAGAGGTTAACAAAAGCT+TGG | + | chr7_2:78342938-78342957 | None:intergenic | 30.0% | |
| AGGAATCAAACAATGAGATA+TGG | + | chr7_2:78343551-78343570 | None:intergenic | 30.0% | |
| ! | CAACTATTGTTGTGTTTTGT+GGG | - | chr7_2:78343692-78343711 | Msa1079300:intron | 30.0% |
| ! | AACTATTGTTGTGTTTTGTG+GGG | - | chr7_2:78343693-78343712 | Msa1079300:intron | 30.0% |
| ATGAATAACTTTGACTAGTG+TGG | - | chr7_2:78343813-78343832 | Msa1079300:intron | 30.0% | |
| ! | CATTATCAAGTAAGCTTTGA+AGG | + | chr7_2:78344038-78344057 | None:intergenic | 30.0% |
| !! | ACTTGCTTCATTTGATAATG+AGG | - | chr7_2:78344211-78344230 | Msa1079300:intron | 30.0% |
| !! | CTTGCTTCATTTGATAATGA+GGG | - | chr7_2:78344212-78344231 | Msa1079300:intron | 30.0% |
| AATGAGGGAAAGTAAAGAAA+AGG | - | chr7_2:78344227-78344246 | Msa1079300:intron | 30.0% | |
| CAGTAGAAAGGTTATTGAAA+AGG | + | chr7_2:78344306-78344325 | None:intergenic | 30.0% | |
| ! | AGTTTTCAATCACTCTTTCT+TGG | - | chr7_2:78344426-78344445 | Msa1079300:CDS | 30.0% |
| ! | GTTTTCAATCACTCTTTCTT+GGG | - | chr7_2:78344427-78344446 | Msa1079300:CDS | 30.0% |
| CCACGATTTAAATAAATCCA+TGG | + | chr7_2:78344578-78344597 | None:intergenic | 30.0% | |
| CCATGGATTTATTTAAATCG+TGG | - | chr7_2:78344575-78344594 | Msa1079300:intron | 30.0% | |
| AACTTCTTGAAGTCATAACA+TGG | - | chr7_2:78344799-78344818 | Msa1079300:intron | 30.0% | |
| ACTTCTTGAAGTCATAACAT+GGG | - | chr7_2:78344800-78344819 | Msa1079300:intron | 30.0% | |
| TTGGACATGTCAATTATTAC+CGG | + | chr7_2:78344849-78344868 | None:intergenic | 30.0% | |
| ! | AATTGACATGTCCAATTTTG+AGG | - | chr7_2:78344854-78344873 | Msa1079300:intron | 30.0% |
| !! | GTTGGATTAGTAAATGTTGA+TGG | - | chr7_2:78344950-78344969 | Msa1079300:intron | 30.0% |
| TTTGTCAATGAATGACAACA+AGG | + | chr7_2:78344987-78345006 | None:intergenic | 30.0% | |
| ! | TTAACTAACTCTTTTGCAGT+TGG | + | chr7_2:78345064-78345083 | None:intergenic | 30.0% |
| GTCCTAACTAAGAAAACTAT+AGG | - | chr7_2:78345105-78345124 | Msa1079300:CDS | 30.0% | |
| TTGGATAAACTAGAGGATAT+TGG | + | chr7_2:78345215-78345234 | None:intergenic | 30.0% | |
| TTGTGAGAATCAGATTGAAA+AGG | + | chr7_2:78345281-78345300 | None:intergenic | 30.0% | |
| CAAAGAAAGTGATTTCACAT+GGG | + | chr7_2:78345318-78345337 | None:intergenic | 30.0% | |
| TCAAAGAAAGTGATTTCACA+TGG | + | chr7_2:78345319-78345338 | None:intergenic | 30.0% | |
| TTGAGATGTCATAATCTTGA+GGG | + | chr7_2:78345614-78345633 | None:intergenic | 30.0% | |
| !! | ATGATATAGAATTTTGGAGG+TGG | - | chr7_2:78345682-78345701 | Msa1079300:intron | 30.0% |
| !!! | TGGTAGGTAGTTTTTTTACC+AGG | + | chr7_2:78342014-78342033 | None:intergenic | 35.0% |
| TACATACCAATTCATTGCCA+AGG | + | chr7_2:78342052-78342071 | None:intergenic | 35.0% | |
| ! | GTGAGTTGAAATGGTGTATA+TGG | - | chr7_2:78342156-78342175 | Msa1079300:three_prime_UTR | 35.0% |
| CTCTGAACCAAACATTTGTA+CGG | - | chr7_2:78342419-78342438 | Msa1079300:intron | 35.0% | |
| GTAAAAAGTGAGAAGAAGGA+AGG | + | chr7_2:78342493-78342512 | None:intergenic | 35.0% | |
| GAAGGTAAAAAGTGAGAAGA+AGG | + | chr7_2:78342497-78342516 | None:intergenic | 35.0% | |
| !! | CTTTGAAATGCAAACAGTGA+AGG | + | chr7_2:78342515-78342534 | None:intergenic | 35.0% |
| ACAAGAAAACCAAATAACGG+TGG | + | chr7_2:78342641-78342660 | None:intergenic | 35.0% | |
| ! | ATTGATCTTGTTTATGGAGG+AGG | - | chr7_2:78342718-78342737 | Msa1079300:intron | 35.0% |
| GTGTTATATACCCAATGACA+TGG | + | chr7_2:78342795-78342814 | None:intergenic | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr7_2:78343171-78343190 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr7_2:78343170-78343189 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr7_2:78343170-78343189 | Msa1079300:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr7_2:78343171-78343190 | Msa1079300:intron | 35.0% | |
| !!! | TGGTTGCTTTTTAGACAGAA+TGG | - | chr7_2:78343626-78343645 | Msa1079300:intron | 35.0% |
| CCACAAAACACAACAATAGT+TGG | + | chr7_2:78343694-78343713 | None:intergenic | 35.0% | |
| ! | CCAACTATTGTTGTGTTTTG+TGG | - | chr7_2:78343691-78343710 | Msa1079300:intron | 35.0% |
| ! | GTTTGAAGCAATGAGAAAAG+AGG | + | chr7_2:78343936-78343955 | None:intergenic | 35.0% |
| TTAAGGGATAAGGTAAGGTA+AGG | + | chr7_2:78344075-78344094 | None:intergenic | 35.0% | |
| TGTGTCTCTGATCAACTATA+TGG | - | chr7_2:78344128-78344147 | Msa1079300:intron | 35.0% | |
| TCTGATCAACTATATGGTTC+AGG | - | chr7_2:78344134-78344153 | Msa1079300:intron | 35.0% | |
| CACTGTTCAAACAAAAGTAG+TGG | + | chr7_2:78344176-78344195 | None:intergenic | 35.0% | |
| !! | CACTACTTTTGTTTGAACAG+TGG | - | chr7_2:78344174-78344193 | Msa1079300:intron | 35.0% |
| GAAAAGGATGAAACAATGTC+AGG | + | chr7_2:78344290-78344309 | None:intergenic | 35.0% | |
| AACTAGTACTAGCAGTAGAA+AGG | + | chr7_2:78344318-78344337 | None:intergenic | 35.0% | |
| AAAATTAGTGACAGAGAGAG+TGG | - | chr7_2:78344387-78344406 | Msa1079300:CDS | 35.0% | |
| ! | TGGGAATCAATTTTCTTAGG+AGG | + | chr7_2:78344455-78344474 | None:intergenic | 35.0% |
| ! | CCTTGGGAATCAATTTTCTT+AGG | + | chr7_2:78344458-78344477 | None:intergenic | 35.0% |
| ! | CCTAAGAAAATTGATTCCCA+AGG | - | chr7_2:78344455-78344474 | Msa1079300:intron | 35.0% |
| TCCAAATGTAGCTATGGATA+TGG | + | chr7_2:78344527-78344546 | None:intergenic | 35.0% | |
| TTTGTGTCCAAATGTAGCTA+TGG | + | chr7_2:78344533-78344552 | None:intergenic | 35.0% | |
| TTATTTAAATCGTGGTCGCA+TGG | - | chr7_2:78344583-78344602 | Msa1079300:intron | 35.0% | |
| GTTTGATGTAGCTTCAATTG+TGG | - | chr7_2:78344642-78344661 | Msa1079300:intron | 35.0% | |
| TCTGAATTAACTTATGCAGG+TGG | - | chr7_2:78344759-78344778 | Msa1079300:intron | 35.0% | |
| TTAACTTATGCAGGTGGATA+TGG | - | chr7_2:78344765-78344784 | Msa1079300:intron | 35.0% | |
| ACAATTATGTGACGAGCATT+TGG | + | chr7_2:78345034-78345053 | None:intergenic | 35.0% | |
| AGAGTTAGTTAAGAAGTTGG+AGG | - | chr7_2:78345072-78345091 | Msa1079300:CDS | 35.0% | |
| GAACTTCTTGGATAAACTAG+AGG | + | chr7_2:78345222-78345241 | None:intergenic | 35.0% | |
| CTTGAGATGTCATAATCTTG+AGG | + | chr7_2:78345615-78345634 | None:intergenic | 35.0% | |
| CTCAAGATTATGACATCTCA+AGG | - | chr7_2:78345613-78345632 | Msa1079300:intron | 35.0% | |
| CTATGTTTACTTCACTTGCA+AGG | - | chr7_2:78345646-78345665 | Msa1079300:intron | 35.0% | |
| AAAGATGAGGATGACTCTTA+AGG | + | chr7_2:78345929-78345948 | None:intergenic | 35.0% | |
| CTTGATCAACACAAAAGATG+AGG | + | chr7_2:78345942-78345961 | None:intergenic | 35.0% | |
| ! | GCTTTGTTGCTACTACTCTT+TGG | + | chr7_2:78341798-78341817 | None:intergenic | 40.0% |
| ACAGTGAGAGACAAAGATGA+AGG | + | chr7_2:78341860-78341879 | None:intergenic | 40.0% | |
| ! | TAACAAATGGACTCACGCAA+TGG | - | chr7_2:78341936-78341955 | Msa1079300:three_prime_UTR | 40.0% |
| ACTCACGCAATGGTGAAATA+AGG | - | chr7_2:78341946-78341965 | Msa1079300:three_prime_UTR | 40.0% | |
| CAATTCATTGCCAAGGTTCA+TGG | + | chr7_2:78342045-78342064 | None:intergenic | 40.0% | |
| CATGAACCTTGGCAATGAAT+TGG | - | chr7_2:78342043-78342062 | Msa1079300:three_prime_UTR | 40.0% | |
| TCATAGTCACCACCGTTATT+TGG | - | chr7_2:78342629-78342648 | Msa1079300:intron | 40.0% | |
| GTTTCTCAAGCTGTTCATGA+TGG | - | chr7_2:78342763-78342782 | Msa1079300:CDS | 40.0% | |
| TACTAGACAAATACCTCTCG+AGG | + | chr7_2:78343031-78343050 | None:intergenic | 40.0% | |
| TATTTGTCTAGTACTCCCTC+CGG | - | chr7_2:78343038-78343057 | Msa1079300:CDS | 40.0% | |
| ! | GGTTAAACTTTTACTCCCTC+CGG | + | chr7_2:78343189-78343208 | None:intergenic | 40.0% |
| ! | TGATGTCATTTGCAGCTAAC+TGG | - | chr7_2:78343366-78343385 | Msa1079300:intron | 40.0% |
| TGAAACAGTAGGAGAAGTGA+AGG | - | chr7_2:78343389-78343408 | Msa1079300:intron | 40.0% | |
| CTGTTGCTGATATGCATCAA+AGG | - | chr7_2:78343412-78343431 | Msa1079300:intron | 40.0% | |
| ! | GATGCTTTTATTGCCTTACC+AGG | - | chr7_2:78343459-78343478 | Msa1079300:intron | 40.0% |
| ! | CTTTTATTGCCTTACCAGGT+TGG | - | chr7_2:78343463-78343482 | Msa1079300:intron | 40.0% |
| CCTTTCTTGTCCTCAATGAA+TGG | + | chr7_2:78343840-78343859 | None:intergenic | 40.0% | |
| CCATTCATTGAGGACAAGAA+AGG | - | chr7_2:78343837-78343856 | Msa1079300:intron | 40.0% | |
| GCCATATCCATAGCTACATT+TGG | - | chr7_2:78344523-78344542 | Msa1079300:intron | 40.0% | |
| ! | TGTTTGTTAGGTCTATGCGA+CGG | + | chr7_2:78344676-78344695 | None:intergenic | 40.0% |
| ACTTGGAATTCATGACAAGC+CGG | - | chr7_2:78344827-78344846 | Msa1079300:intron | 40.0% | |
| GTCATTCATTGACAAAGCTG+TGG | - | chr7_2:78344991-78345010 | Msa1079300:intron | 40.0% | |
| ATTGACAAAGCTGTGGAAGA+AGG | - | chr7_2:78344998-78345017 | Msa1079300:intron | 40.0% | |
| TTGACAAAGCTGTGGAAGAA+GGG | - | chr7_2:78344999-78345018 | Msa1079300:intron | 40.0% | |
| AAACACTGGCAAGAACTTCT+TGG | + | chr7_2:78345234-78345253 | None:intergenic | 40.0% | |
| AAGTTCTTGCCAGTGTTTGT+TGG | - | chr7_2:78345236-78345255 | Msa1079300:intron | 40.0% | |
| GTAATAGTGCCAACAAACAC+TGG | + | chr7_2:78345248-78345267 | None:intergenic | 40.0% | |
| GAGTATGTTCCATGTCATGA+GGG | - | chr7_2:78345543-78345562 | Msa1079300:intron | 40.0% | |
| ! | GCGTGAGTCCATTTGTTAGT+TGG | + | chr7_2:78341934-78341953 | None:intergenic | 45.0% |
| ! | GTTTTCTGTGGAAGTAGTCC+TGG | - | chr7_2:78341993-78342012 | Msa1079300:three_prime_UTR | 45.0% |
| ! | GTTTATGGAGGAGGAAGCAT+TGG | - | chr7_2:78342727-78342746 | Msa1079300:intron | 45.0% |
| TCTCAAGCTGTTCATGATGG+TGG | - | chr7_2:78342766-78342785 | Msa1079300:CDS | 45.0% | |
| CAGCTAACTGGTGAAACAGT+AGG | - | chr7_2:78343378-78343397 | Msa1079300:intron | 45.0% | |
| GCATCAAAGGAAAGCTGAGA+TGG | - | chr7_2:78343425-78343444 | Msa1079300:intron | 45.0% | |
| CTAGTGTGGTCCATTCATTG+AGG | - | chr7_2:78343827-78343846 | Msa1079300:intron | 45.0% | |
| GATGAAACAATGTCAGGTGC+AGG | + | chr7_2:78344284-78344303 | None:intergenic | 45.0% | |
| ATTAGTGACAGAGAGAGTGG+AGG | - | chr7_2:78344390-78344409 | Msa1079300:CDS | 45.0% | |
| TATGGATATGGCAGTGTCAG+GGG | + | chr7_2:78344515-78344534 | None:intergenic | 45.0% | |
| CTATGGATATGGCAGTGTCA+GGG | + | chr7_2:78344516-78344535 | None:intergenic | 45.0% | |
| TTTAAATCGTGGTCGCATGG+CGG | - | chr7_2:78344586-78344605 | Msa1079300:intron | 45.0% | |
| AGGTGGATATGGAACTCTAG+AGG | - | chr7_2:78344776-78344795 | Msa1079300:intron | 45.0% | |
| GTCATAACATGGGCTCAACT+TGG | - | chr7_2:78344810-78344829 | Msa1079300:CDS | 45.0% | |
| GGAGTATGTTCCATGTCATG+AGG | - | chr7_2:78345542-78345561 | Msa1079300:intron | 45.0% | |
| GTCATCGCAACAACGGAAAT+TGG | + | chr7_2:78346024-78346043 | None:intergenic | 45.0% | |
| GTTCATGGCAGCATCTTGGT+AGG | + | chr7_2:78342030-78342049 | None:intergenic | 50.0% | |
| CAAGGTTCATGGCAGCATCT+TGG | + | chr7_2:78342034-78342053 | None:intergenic | 50.0% | |
| CAAGATGCTGCCATGAACCT+TGG | - | chr7_2:78342032-78342051 | Msa1079300:three_prime_UTR | 50.0% | |
| !! | AGGAGGAAGCATTGGTCTCA+TGG | - | chr7_2:78342735-78342754 | Msa1079300:intron | 50.0% |
| !! | GGAGGAAGCATTGGTCTCAT+GGG | - | chr7_2:78342736-78342755 | Msa1079300:intron | 50.0% |
| ATGGTGGTCGCCATGTCATT+GGG | - | chr7_2:78342782-78342801 | Msa1079300:CDS | 50.0% | |
| TCTCGAGGCATGAGTGTCTT+GGG | + | chr7_2:78343016-78343035 | None:intergenic | 50.0% | |
| TGCTAAGTGCCAACCTGGTA+AGG | + | chr7_2:78343475-78343494 | None:intergenic | 50.0% | |
| TTGCATGCTAAGTGCCAACC+TGG | + | chr7_2:78343480-78343499 | None:intergenic | 50.0% | |
| TGTCAGGTGCAGGTGCTAAT+TGG | + | chr7_2:78344274-78344293 | None:intergenic | 50.0% | |
| ATATGGCAGTGTCAGGGGAA+AGG | + | chr7_2:78344510-78344529 | None:intergenic | 50.0% | |
| GCTATGGATATGGCAGTGTC+AGG | + | chr7_2:78344517-78344536 | None:intergenic | 50.0% | |
| GAAGCAACACCCTCATGACA+TGG | + | chr7_2:78345555-78345574 | None:intergenic | 50.0% | |
| !! | GTGTTGCTTCCAAGTTGAGC+TGG | - | chr7_2:78345565-78345584 | Msa1079300:intron | 50.0% |
| ! | TTCCAAGTTGAGCTGGCAGA+TGG | - | chr7_2:78345572-78345591 | Msa1079300:intron | 50.0% |
| TTCCATCTGCCAGCTCAACT+TGG | + | chr7_2:78345577-78345596 | None:intergenic | 50.0% | |
| ! | GATGGTGGTCGCCATGTCAT+TGG | - | chr7_2:78342781-78342800 | Msa1079300:CDS | 55.0% |
| CTCTCGAGGCATGAGTGTCT+TGG | + | chr7_2:78343017-78343036 | None:intergenic | 55.0% | |
| CAAGACACTCATGCCTCGAG+AGG | - | chr7_2:78343015-78343034 | Msa1079300:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 78341794 | 78346047 | 78341794 | ID=Msa1079300;Name=Msa1079300 |
| chr7_2 | mRNA | 78341794 | 78346047 | 78341794 | ID=Msa1079300-mRNA-1;Parent=Msa1079300;Name=Msa1079300-mRNA-1;_AED=0.04;_eAED=0.04;_QI=148|1|1|1|1|1|7|409|220 |
| chr7_2 | exon | 78341794 | 78342298 | 78341794 | ID=Msa1079300-mRNA-1:exon:19521;Parent=Msa1079300-mRNA-1 |
| chr7_2 | exon | 78342748 | 78342891 | 78342748 | ID=Msa1079300-mRNA-1:exon:19520;Parent=Msa1079300-mRNA-1 |
| chr7_2 | exon | 78342993 | 78343063 | 78342993 | ID=Msa1079300-mRNA-1:exon:19519;Parent=Msa1079300-mRNA-1 |
| chr7_2 | exon | 78344361 | 78344460 | 78344361 | ID=Msa1079300-mRNA-1:exon:19518;Parent=Msa1079300-mRNA-1 |
| chr7_2 | exon | 78344805 | 78344835 | 78344805 | ID=Msa1079300-mRNA-1:exon:19517;Parent=Msa1079300-mRNA-1 |
| chr7_2 | exon | 78345038 | 78345135 | 78345038 | ID=Msa1079300-mRNA-1:exon:19516;Parent=Msa1079300-mRNA-1 |
| chr7_2 | exon | 78345777 | 78346047 | 78345777 | ID=Msa1079300-mRNA-1:exon:19515;Parent=Msa1079300-mRNA-1 |
| chr7_2 | five_prime_UTR | 78345900 | 78346047 | 78345900 | ID=Msa1079300-mRNA-1:five_prime_utr;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78345777 | 78345899 | 78345777 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78345038 | 78345135 | 78345038 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78344805 | 78344835 | 78344805 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78344361 | 78344460 | 78344361 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78342993 | 78343063 | 78342993 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78342748 | 78342891 | 78342748 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | CDS | 78342203 | 78342298 | 78342203 | ID=Msa1079300-mRNA-1:cds;Parent=Msa1079300-mRNA-1 |
| chr7_2 | three_prime_UTR | 78341794 | 78342202 | 78341794 | ID=Msa1079300-mRNA-1:three_prime_utr;Parent=Msa1079300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
