Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80430.t1 | XP_013451880.1 | 96.5 | 284 | 10 | 0 | 1 | 284 | 1 | 284 | 1.50E-149 | 538.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80430.t1 | Q9SRE0 | 66.2 | 293 | 85 | 3 | 6 | 284 | 2 | 294 | 1.4e-100 | 367.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80430.t1 | I3T039 | 96.5 | 284 | 10 | 0 | 1 | 284 | 1 | 284 | 1.1e-149 | 538.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene80430 | 0.851898 | 6.57E-61 | -1.69E-46 |
MS.gene049171 | MS.gene80430 | 0.908178 | 2.27E-81 | -1.69E-46 |
MS.gene049173 | MS.gene80430 | 0.869292 | 3.45E-66 | -1.69E-46 |
MS.gene049217 | MS.gene80430 | 0.874726 | 5.39E-68 | -1.69E-46 |
MS.gene049222 | MS.gene80430 | 0.911157 | 8.35E-83 | -1.69E-46 |
MS.gene049232 | MS.gene80430 | 0.840092 | 1.07E-57 | -1.69E-46 |
MS.gene049285 | MS.gene80430 | 0.907567 | 4.41E-81 | -1.69E-46 |
MS.gene049320 | MS.gene80430 | 0.89621 | 4.59E-76 | -1.69E-46 |
MS.gene04939 | MS.gene80430 | 0.828774 | 7.46E-55 | -1.69E-46 |
MS.gene049427 | MS.gene80430 | 0.828422 | 9.07E-55 | -1.69E-46 |
MS.gene049609 | MS.gene80430 | 0.871789 | 5.23E-67 | -1.69E-46 |
MS.gene049627 | MS.gene80430 | 0.83691 | 7.09E-57 | -1.69E-46 |
MS.gene049633 | MS.gene80430 | 0.885465 | 7.94E-72 | -1.69E-46 |
MS.gene049805 | MS.gene80430 | 0.879036 | 1.73E-69 | -1.69E-46 |
MS.gene05010 | MS.gene80430 | 0.838523 | 2.73E-57 | -1.69E-46 |
MS.gene050163 | MS.gene80430 | 0.904726 | 9.08E-80 | -1.69E-46 |
MS.gene050165 | MS.gene80430 | 0.898381 | 5.61E-77 | -1.69E-46 |
MS.gene050170 | MS.gene80430 | 0.82806 | 1.11E-54 | -1.69E-46 |
MS.gene050323 | MS.gene80430 | 0.855916 | 4.58E-62 | -1.69E-46 |
MS.gene050333 | MS.gene80430 | 0.887642 | 1.19E-72 | -1.69E-46 |
MS.gene050444 | MS.gene80430 | 0.871481 | 6.61E-67 | -1.69E-46 |
MS.gene050496 | MS.gene80430 | 0.809286 | 2.04E-50 | -1.69E-46 |
MS.gene050504 | MS.gene80430 | 0.902292 | 1.13E-78 | -1.69E-46 |
MS.gene050518 | MS.gene80430 | 0.874014 | 9.40E-68 | -1.69E-46 |
MS.gene050538 | MS.gene80430 | 0.847163 | 1.38E-59 | -1.69E-46 |
MS.gene050577 | MS.gene80430 | 0.886581 | 3.02E-72 | -1.69E-46 |
MS.gene050593 | MS.gene80430 | 0.83305 | 6.66E-56 | -1.69E-46 |
MS.gene050612 | MS.gene80430 | 0.887671 | 1.16E-72 | -1.69E-46 |
MS.gene050675 | MS.gene80430 | 0.865375 | 6.18E-65 | -1.69E-46 |
MS.gene050690 | MS.gene80430 | 0.812009 | 5.26E-51 | -1.69E-46 |
MS.gene050699 | MS.gene80430 | 0.888546 | 5.37E-73 | -1.69E-46 |
MS.gene050747 | MS.gene80430 | 0.896673 | 2.94E-76 | -1.69E-46 |
MS.gene050772 | MS.gene80430 | 0.898584 | 4.60E-77 | -1.69E-46 |
MS.gene05080 | MS.gene80430 | 0.861765 | 8.15E-64 | -1.69E-46 |
MS.gene05081 | MS.gene80430 | 0.819604 | 1.06E-52 | -1.69E-46 |
MS.gene050868 | MS.gene80430 | 0.86381 | 1.91E-64 | -1.69E-46 |
MS.gene050871 | MS.gene80430 | 0.862174 | 6.11E-64 | -1.69E-46 |
MS.gene050876 | MS.gene80430 | 0.815489 | 9.01E-52 | -1.69E-46 |
MS.gene050904 | MS.gene80430 | 0.843604 | 1.27E-58 | -1.69E-46 |
MS.gene050950 | MS.gene80430 | 0.887076 | 1.96E-72 | -1.69E-46 |
MS.gene050986 | MS.gene80430 | 0.876151 | 1.75E-68 | -1.69E-46 |
MS.gene05100 | MS.gene80430 | 0.880507 | 5.19E-70 | -1.69E-46 |
MS.gene051167 | MS.gene80430 | -0.820366 | 7.13E-53 | -1.69E-46 |
MS.gene051228 | MS.gene80430 | 0.853743 | 1.95E-61 | -1.69E-46 |
MS.gene051317 | MS.gene80430 | 0.877577 | 5.62E-69 | -1.69E-46 |
MS.gene051387 | MS.gene80430 | 0.808216 | 3.45E-50 | -1.69E-46 |
MS.gene051438 | MS.gene80430 | 0.80327 | 3.78E-49 | -1.69E-46 |
MS.gene051551 | MS.gene80430 | 0.867513 | 1.29E-65 | -1.69E-46 |
MS.gene051617 | MS.gene80430 | 0.803007 | 4.28E-49 | -1.69E-46 |
MS.gene051666 | MS.gene80430 | 0.864166 | 1.48E-64 | -1.69E-46 |
MS.gene051692 | MS.gene80430 | 0.807828 | 4.18E-50 | -1.69E-46 |
MS.gene051694 | MS.gene80430 | 0.849454 | 3.20E-60 | -1.69E-46 |
MS.gene051810 | MS.gene80430 | 0.865987 | 3.96E-65 | -1.69E-46 |
MS.gene051838 | MS.gene80430 | 0.857839 | 1.24E-62 | -1.69E-46 |
MS.gene051858 | MS.gene80430 | 0.840081 | 1.08E-57 | -1.69E-46 |
MS.gene051949 | MS.gene80430 | 0.855096 | 7.93E-62 | -1.69E-46 |
MS.gene052164 | MS.gene80430 | 0.887676 | 1.16E-72 | -1.69E-46 |
MS.gene052271 | MS.gene80430 | 0.832714 | 8.07E-56 | -1.69E-46 |
MS.gene052379 | MS.gene80430 | 0.836404 | 9.55E-57 | -1.69E-46 |
MS.gene052421 | MS.gene80430 | 0.810387 | 1.18E-50 | -1.69E-46 |
MS.gene052482 | MS.gene80430 | 0.83775 | 4.32E-57 | -1.69E-46 |
MS.gene052484 | MS.gene80430 | 0.805822 | 1.11E-49 | -1.69E-46 |
MS.gene052486 | MS.gene80430 | 0.84829 | 6.73E-60 | -1.69E-46 |
MS.gene052501 | MS.gene80430 | 0.829098 | 6.23E-55 | -1.69E-46 |
MS.gene052503 | MS.gene80430 | 0.876038 | 1.92E-68 | -1.69E-46 |
MS.gene052504 | MS.gene80430 | 0.806152 | 9.45E-50 | -1.69E-46 |
MS.gene052505 | MS.gene80430 | 0.809724 | 1.64E-50 | -1.69E-46 |
MS.gene052506 | MS.gene80430 | 0.843574 | 1.29E-58 | -1.69E-46 |
MS.gene052605 | MS.gene80430 | 0.816125 | 6.50E-52 | -1.69E-46 |
MS.gene052615 | MS.gene80430 | 0.870986 | 9.64E-67 | -1.69E-46 |
MS.gene052820 | MS.gene80430 | 0.812106 | 5.01E-51 | -1.69E-46 |
MS.gene052822 | MS.gene80430 | 0.8506 | 1.53E-60 | -1.69E-46 |
MS.gene052823 | MS.gene80430 | 0.869904 | 2.18E-66 | -1.69E-46 |
MS.gene052825 | MS.gene80430 | 0.87221 | 3.79E-67 | -1.69E-46 |
MS.gene052870 | MS.gene80430 | 0.838601 | 2.61E-57 | -1.69E-46 |
MS.gene052872 | MS.gene80430 | 0.853827 | 1.85E-61 | -1.69E-46 |
MS.gene052916 | MS.gene80430 | 0.842683 | 2.23E-58 | -1.69E-46 |
MS.gene052966 | MS.gene80430 | 0.857506 | 1.56E-62 | -1.69E-46 |
MS.gene053009 | MS.gene80430 | 0.836289 | 1.02E-56 | -1.69E-46 |
MS.gene053103 | MS.gene80430 | 0.802352 | 5.84E-49 | -1.69E-46 |
MS.gene053104 | MS.gene80430 | 0.828787 | 7.40E-55 | -1.69E-46 |
MS.gene053117 | MS.gene80430 | 0.802468 | 5.53E-49 | -1.69E-46 |
MS.gene053203 | MS.gene80430 | 0.889969 | 1.50E-73 | -1.69E-46 |
MS.gene053207 | MS.gene80430 | 0.880344 | 5.93E-70 | -1.69E-46 |
MS.gene053213 | MS.gene80430 | 0.89278 | 1.16E-74 | -1.69E-46 |
MS.gene053284 | MS.gene80430 | 0.814676 | 1.36E-51 | -1.69E-46 |
MS.gene053285 | MS.gene80430 | 0.817044 | 4.04E-52 | -1.69E-46 |
MS.gene053286 | MS.gene80430 | 0.888878 | 3.99E-73 | -1.69E-46 |
MS.gene053322 | MS.gene80430 | 0.841779 | 3.86E-58 | -1.69E-46 |
MS.gene053436 | MS.gene80430 | 0.843405 | 1.43E-58 | -1.69E-46 |
MS.gene053479 | MS.gene80430 | 0.818718 | 1.69E-52 | -1.69E-46 |
MS.gene053480 | MS.gene80430 | 0.841279 | 5.23E-58 | -1.69E-46 |
MS.gene053574 | MS.gene80430 | 0.866371 | 3.00E-65 | -1.69E-46 |
MS.gene053579 | MS.gene80430 | 0.822081 | 2.87E-53 | -1.69E-46 |
MS.gene053626 | MS.gene80430 | 0.823152 | 1.62E-53 | -1.69E-46 |
MS.gene053632 | MS.gene80430 | 0.899344 | 2.18E-77 | -1.69E-46 |
MS.gene053824 | MS.gene80430 | 0.876386 | 1.45E-68 | -1.69E-46 |
MS.gene053916 | MS.gene80430 | 0.853369 | 2.50E-61 | -1.69E-46 |
MS.gene054003 | MS.gene80430 | 0.800701 | 1.27E-48 | -1.69E-46 |
MS.gene054408 | MS.gene80430 | 0.855075 | 8.04E-62 | -1.69E-46 |
MS.gene054595 | MS.gene80430 | 0.858633 | 7.20E-63 | -1.69E-46 |
MS.gene054600 | MS.gene80430 | 0.889666 | 1.97E-73 | -1.69E-46 |
MS.gene054642 | MS.gene80430 | 0.905139 | 5.88E-80 | -1.69E-46 |
MS.gene054706 | MS.gene80430 | -0.816077 | 6.66E-52 | -1.69E-46 |
MS.gene05470 | MS.gene80430 | 0.876865 | 9.94E-69 | -1.69E-46 |
MS.gene054927 | MS.gene80430 | 0.832953 | 7.04E-56 | -1.69E-46 |
MS.gene054954 | MS.gene80430 | 0.895714 | 7.37E-76 | -1.69E-46 |
MS.gene05505 | MS.gene80430 | 0.831603 | 1.52E-55 | -1.69E-46 |
MS.gene055206 | MS.gene80430 | 0.867714 | 1.12E-65 | -1.69E-46 |
MS.gene055212 | MS.gene80430 | 0.848922 | 4.50E-60 | -1.69E-46 |
MS.gene055224 | MS.gene80430 | 0.824058 | 9.91E-54 | -1.69E-46 |
MS.gene055289 | MS.gene80430 | 0.845329 | 4.35E-59 | -1.69E-46 |
MS.gene055362 | MS.gene80430 | 0.905987 | 2.40E-80 | -1.69E-46 |
MS.gene055397 | MS.gene80430 | 0.820379 | 7.08E-53 | -1.69E-46 |
MS.gene055499 | MS.gene80430 | 0.827428 | 1.57E-54 | -1.69E-46 |
MS.gene055502 | MS.gene80430 | 0.904764 | 8.72E-80 | -1.69E-46 |
MS.gene055577 | MS.gene80430 | 0.89298 | 9.61E-75 | -1.69E-46 |
MS.gene055636 | MS.gene80430 | 0.813558 | 2.41E-51 | -1.69E-46 |
MS.gene055638 | MS.gene80430 | 0.812838 | 3.47E-51 | -1.69E-46 |
MS.gene055647 | MS.gene80430 | 0.830104 | 3.54E-55 | -1.69E-46 |
MS.gene055722 | MS.gene80430 | 0.866706 | 2.34E-65 | -1.69E-46 |
MS.gene055748 | MS.gene80430 | 0.880349 | 5.90E-70 | -1.69E-46 |
MS.gene055750 | MS.gene80430 | 0.861168 | 1.24E-63 | -1.69E-46 |
MS.gene055751 | MS.gene80430 | 0.872754 | 2.49E-67 | -1.69E-46 |
MS.gene055776 | MS.gene80430 | 0.837258 | 5.78E-57 | -1.69E-46 |
MS.gene05589 | MS.gene80430 | 0.848102 | 7.59E-60 | -1.69E-46 |
MS.gene05592 | MS.gene80430 | 0.821534 | 3.84E-53 | -1.69E-46 |
MS.gene055941 | MS.gene80430 | 0.853757 | 1.93E-61 | -1.69E-46 |
MS.gene055956 | MS.gene80430 | -0.834386 | 3.09E-56 | -1.69E-46 |
MS.gene056083 | MS.gene80430 | 0.879886 | 8.64E-70 | -1.69E-46 |
MS.gene056374 | MS.gene80430 | 0.867814 | 1.04E-65 | -1.69E-46 |
MS.gene056409 | MS.gene80430 | 0.835846 | 1.32E-56 | -1.69E-46 |
MS.gene056449 | MS.gene80430 | 0.815245 | 1.02E-51 | -1.69E-46 |
MS.gene056450 | MS.gene80430 | 0.807466 | 4.99E-50 | -1.69E-46 |
MS.gene056487 | MS.gene80430 | 0.825365 | 4.88E-54 | -1.69E-46 |
MS.gene056504 | MS.gene80430 | 0.871272 | 7.76E-67 | -1.69E-46 |
MS.gene056510 | MS.gene80430 | 0.888906 | 3.90E-73 | -1.69E-46 |
MS.gene056549 | MS.gene80430 | 0.827635 | 1.40E-54 | -1.69E-46 |
MS.gene056550 | MS.gene80430 | -0.80021 | 1.60E-48 | -1.69E-46 |
MS.gene056610 | MS.gene80430 | 0.82587 | 3.70E-54 | -1.69E-46 |
MS.gene05664 | MS.gene80430 | 0.810492 | 1.12E-50 | -1.69E-46 |
MS.gene056657 | MS.gene80430 | 0.901171 | 3.51E-78 | -1.69E-46 |
MS.gene05666 | MS.gene80430 | 0.801727 | 7.85E-49 | -1.69E-46 |
MS.gene056692 | MS.gene80430 | 0.87276 | 2.48E-67 | -1.69E-46 |
MS.gene056897 | MS.gene80430 | 0.813334 | 2.70E-51 | -1.69E-46 |
MS.gene056898 | MS.gene80430 | 0.831022 | 2.11E-55 | -1.69E-46 |
MS.gene056946 | MS.gene80430 | 0.800606 | 1.33E-48 | -1.69E-46 |
MS.gene057011 | MS.gene80430 | 0.808131 | 3.60E-50 | -1.69E-46 |
MS.gene057048 | MS.gene80430 | 0.805748 | 1.15E-49 | -1.69E-46 |
MS.gene057076 | MS.gene80430 | 0.821844 | 3.25E-53 | -1.69E-46 |
MS.gene057129 | MS.gene80430 | 0.857938 | 1.16E-62 | -1.69E-46 |
MS.gene057146 | MS.gene80430 | 0.810457 | 1.14E-50 | -1.69E-46 |
MS.gene057246 | MS.gene80430 | 0.811578 | 6.53E-51 | -1.69E-46 |
MS.gene057331 | MS.gene80430 | 0.837547 | 4.87E-57 | -1.69E-46 |
MS.gene057332 | MS.gene80430 | 0.802396 | 5.72E-49 | -1.69E-46 |
MS.gene057416 | MS.gene80430 | 0.893943 | 3.92E-75 | -1.69E-46 |
MS.gene05753 | MS.gene80430 | 0.806308 | 8.76E-50 | -1.69E-46 |
MS.gene057658 | MS.gene80430 | 0.880649 | 4.61E-70 | -1.69E-46 |
MS.gene057734 | MS.gene80430 | 0.818342 | 2.06E-52 | -1.69E-46 |
MS.gene057831 | MS.gene80430 | 0.877818 | 4.63E-69 | -1.69E-46 |
MS.gene057856 | MS.gene80430 | 0.826951 | 2.05E-54 | -1.69E-46 |
MS.gene057857 | MS.gene80430 | 0.84049 | 8.43E-58 | -1.69E-46 |
MS.gene05787 | MS.gene80430 | 0.817192 | 3.75E-52 | -1.69E-46 |
MS.gene057926 | MS.gene80430 | 0.822896 | 1.85E-53 | -1.69E-46 |
MS.gene058019 | MS.gene80430 | 0.837667 | 4.54E-57 | -1.69E-46 |
MS.gene058130 | MS.gene80430 | 0.801172 | 1.02E-48 | -1.69E-46 |
MS.gene058323 | MS.gene80430 | 0.807007 | 6.24E-50 | -1.69E-46 |
MS.gene058334 | MS.gene80430 | -0.822584 | 2.19E-53 | -1.69E-46 |
MS.gene058338 | MS.gene80430 | 0.843492 | 1.36E-58 | -1.69E-46 |
MS.gene05837 | MS.gene80430 | 0.83314 | 6.33E-56 | -1.69E-46 |
MS.gene058419 | MS.gene80430 | 0.905206 | 5.48E-80 | -1.69E-46 |
MS.gene058544 | MS.gene80430 | 0.899366 | 2.13E-77 | -1.69E-46 |
MS.gene058723 | MS.gene80430 | 0.873012 | 2.04E-67 | -1.69E-46 |
MS.gene058773 | MS.gene80430 | 0.892748 | 1.19E-74 | -1.69E-46 |
MS.gene058838 | MS.gene80430 | 0.894229 | 3.00E-75 | -1.69E-46 |
MS.gene05883 | MS.gene80430 | 0.833787 | 4.36E-56 | -1.69E-46 |
MS.gene059022 | MS.gene80430 | 0.897233 | 1.71E-76 | -1.69E-46 |
MS.gene059023 | MS.gene80430 | 0.897166 | 1.83E-76 | -1.69E-46 |
MS.gene059029 | MS.gene80430 | 0.837005 | 6.71E-57 | -1.69E-46 |
MS.gene059079 | MS.gene80430 | 0.81842 | 1.98E-52 | -1.69E-46 |
MS.gene05912 | MS.gene80430 | 0.810256 | 1.26E-50 | -1.69E-46 |
MS.gene05913 | MS.gene80430 | 0.833425 | 5.37E-56 | -1.69E-46 |
MS.gene05914 | MS.gene80430 | 0.820465 | 6.76E-53 | -1.69E-46 |
MS.gene05934 | MS.gene80430 | 0.868039 | 8.78E-66 | -1.69E-46 |
MS.gene059367 | MS.gene80430 | 0.805873 | 1.08E-49 | -1.69E-46 |
MS.gene059455 | MS.gene80430 | 0.801081 | 1.07E-48 | -1.69E-46 |
MS.gene059536 | MS.gene80430 | 0.833235 | 5.99E-56 | -1.69E-46 |
MS.gene059667 | MS.gene80430 | 0.820515 | 6.58E-53 | -1.69E-46 |
MS.gene059677 | MS.gene80430 | 0.913043 | 9.72E-84 | -1.69E-46 |
MS.gene059718 | MS.gene80430 | 0.909872 | 3.52E-82 | -1.69E-46 |
MS.gene059756 | MS.gene80430 | 0.882658 | 8.66E-71 | -1.69E-46 |
MS.gene059801 | MS.gene80430 | 0.850307 | 1.85E-60 | -1.69E-46 |
MS.gene059865 | MS.gene80430 | 0.86985 | 2.27E-66 | -1.69E-46 |
MS.gene059902 | MS.gene80430 | 0.834792 | 2.44E-56 | -1.69E-46 |
MS.gene059960 | MS.gene80430 | 0.831626 | 1.50E-55 | -1.69E-46 |
MS.gene06000 | MS.gene80430 | 0.825707 | 4.05E-54 | -1.69E-46 |
MS.gene060341 | MS.gene80430 | 0.841049 | 6.01E-58 | -1.69E-46 |
MS.gene060482 | MS.gene80430 | 0.821575 | 3.75E-53 | -1.69E-46 |
MS.gene060703 | MS.gene80430 | 0.840419 | 8.80E-58 | -1.69E-46 |
MS.gene060727 | MS.gene80430 | 0.806413 | 8.33E-50 | -1.69E-46 |
MS.gene060728 | MS.gene80430 | 0.83056 | 2.74E-55 | -1.69E-46 |
MS.gene060762 | MS.gene80430 | 0.912019 | 3.15E-83 | -1.69E-46 |
MS.gene060778 | MS.gene80430 | 0.806181 | 9.32E-50 | -1.69E-46 |
MS.gene06077 | MS.gene80430 | 0.871114 | 8.75E-67 | -1.69E-46 |
MS.gene060804 | MS.gene80430 | 0.818757 | 1.66E-52 | -1.69E-46 |
MS.gene060818 | MS.gene80430 | 0.822834 | 1.92E-53 | -1.69E-46 |
MS.gene060835 | MS.gene80430 | 0.829654 | 4.56E-55 | -1.69E-46 |
MS.gene06092 | MS.gene80430 | 0.882819 | 7.57E-71 | -1.69E-46 |
MS.gene060982 | MS.gene80430 | 0.869466 | 3.03E-66 | -1.69E-46 |
MS.gene061041 | MS.gene80430 | 0.822814 | 1.94E-53 | -1.69E-46 |
MS.gene061134 | MS.gene80430 | 0.81047 | 1.13E-50 | -1.69E-46 |
MS.gene061150 | MS.gene80430 | 0.901445 | 2.66E-78 | -1.69E-46 |
MS.gene061171 | MS.gene80430 | 0.817675 | 2.92E-52 | -1.69E-46 |
MS.gene061200 | MS.gene80430 | 0.846305 | 2.36E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80430.t1 | MTR_6g037530 | 96.479 | 284 | 10 | 0 | 1 | 284 | 1 | 284 | 0.0 | 564 |
MS.gene80430.t1 | MTR_6g037530 | 96.476 | 227 | 8 | 0 | 1 | 227 | 1 | 227 | 1.94e-160 | 447 |
MS.gene80430.t1 | MTR_6g037560 | 82.000 | 50 | 9 | 0 | 178 | 227 | 31 | 80 | 9.70e-25 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80430.t1 | AT1G76730 | 66.212 | 293 | 85 | 3 | 6 | 284 | 2 | 294 | 7.36e-135 | 386 |
Find 72 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAATTGGTCGACCATATT+TGG | 0.146364 | 6.3:+29953334 | None:intergenic |
AAAGTAGATCTTATTGTTAT+TGG | 0.152589 | 6.3:-29953296 | MS.gene80430:CDS |
GTCAGATTTCTCACTCTTTC+AGG | 0.185200 | 6.3:-29954280 | MS.gene80430:intron |
ATTACCCATTTCCAAGCTTT+TGG | 0.227028 | 6.3:+29955777 | None:intergenic |
ATATGGTATGTTGCGTTATA+TGG | 0.257841 | 6.3:-29952513 | MS.gene80430:CDS |
GGGTAATTAGAAAGAGGATA+TGG | 0.271179 | 6.3:-29955761 | MS.gene80430:CDS |
AGAGAAGCACGAACAAAATT+AGG | 0.273199 | 6.3:+29955681 | None:intergenic |
ACTTGTTTCTGAGGAGAATC+TGG | 0.290978 | 6.3:+29954301 | None:intergenic |
AAAGAGGATATGGGATTTGA+TGG | 0.331100 | 6.3:-29955751 | MS.gene80430:CDS |
CCTAATCGAGCACCTGTGTT+CGG | 0.335307 | 6.3:+29953257 | None:intergenic |
CACTTCCATTTCATTCAAAC+TGG | 0.336323 | 6.3:-29955931 | MS.gene80430:CDS |
TGAGTCAAATATGTTAACTT+TGG | 0.344058 | 6.3:-29953393 | MS.gene80430:CDS |
GAGTCAAATATGTTAACTTT+GGG | 0.360873 | 6.3:-29953392 | MS.gene80430:CDS |
GGATTTGCAGAACTTGAATA+TGG | 0.362270 | 6.3:-29952530 | MS.gene80430:CDS |
GCCAAATATGGTCGACCAAT+TGG | 0.376504 | 6.3:-29953335 | MS.gene80430:CDS |
ATGATCCAAAAGCTTGGAAA+TGG | 0.377444 | 6.3:-29955782 | MS.gene80430:CDS |
TGCTTCTCTTGCTGCTGATA+AGG | 0.377587 | 6.3:-29955667 | MS.gene80430:intron |
AGGAAGCCTGTACTTCTGTT+GGG | 0.384062 | 6.3:-29953361 | MS.gene80430:CDS |
CTAATCGAGCACCTGTGTTC+GGG | 0.385036 | 6.3:+29953258 | None:intergenic |
GGCTTCCAGTTTGAATGAAA+TGG | 0.406006 | 6.3:+29955926 | None:intergenic |
TCTGTTGGGGTTGCCAAATA+TGG | 0.406711 | 6.3:-29953347 | MS.gene80430:CDS |
TTTGTTGTTGTTGCTGTTGG+TGG | 0.417134 | 6.3:+29955905 | None:intergenic |
AGCTTTGTTGTTGTTGCTGT+TGG | 0.422102 | 6.3:+29955902 | None:intergenic |
TTAGGAATCCTATGATGAAC+AGG | 0.427277 | 6.3:+29955699 | None:intergenic |
CAATCAAAGAAGCTTGTAGA+AGG | 0.427514 | 6.3:+29951797 | None:intergenic |
GTGGAGAGAGAGCGGTAAAG+AGG | 0.427620 | 6.3:+29955963 | None:intergenic |
CTCAAAAGCAGCCTCATTGA+AGG | 0.437031 | 6.3:+29955878 | None:intergenic |
CCGAACACAGGTGCTCGATT+AGG | 0.445240 | 6.3:-29953257 | MS.gene80430:CDS |
TAAAGAGGAGAGAGAGTGAA+TGG | 0.446819 | 6.3:+29955978 | None:intergenic |
CTGGAATGTCATCCACCAAT+TGG | 0.474668 | 6.3:+29951967 | None:intergenic |
ATCCTAGACCTGTTCATCAT+AGG | 0.476390 | 6.3:-29955707 | MS.gene80430:CDS |
TCGTCGAGCAATGGCGGTCG+AGG | 0.483654 | 6.3:-29955826 | MS.gene80430:CDS |
GGTAATTAGAAAGAGGATAT+GGG | 0.487874 | 6.3:-29955760 | MS.gene80430:CDS |
AAATGGAAACACAAGCATTA+CGG | 0.488225 | 6.3:-29956010 | MS.gene80430:CDS |
CAGTTTGAATGAAATGGAAG+TGG | 0.489259 | 6.3:+29955932 | None:intergenic |
GTTAACTTTGGGTACCATCA+AGG | 0.493467 | 6.3:-29953381 | MS.gene80430:CDS |
AAGGAAGCCTGTACTTCTGT+TGG | 0.495849 | 6.3:-29953362 | MS.gene80430:CDS |
TACAGTGCATGACTGCCAAT+TGG | 0.497413 | 6.3:-29951982 | MS.gene80430:intron |
ATCCTATGATGAACAGGTCT+AGG | 0.500568 | 6.3:+29955705 | None:intergenic |
AGAAGTACAGGCTTCCTTGA+TGG | 0.501762 | 6.3:+29953367 | None:intergenic |
TGCGAGATGATCCAAAAGCT+TGG | 0.506258 | 6.3:-29955788 | MS.gene80430:CDS |
GGCAACCCCAACAGAAGTAC+AGG | 0.513556 | 6.3:+29953355 | None:intergenic |
CGCAGAAGCTCGTCGAGCAA+TGG | 0.514659 | 6.3:-29955835 | MS.gene80430:CDS |
CCTCAACCACGGCTGAGGAC+AGG | 0.514670 | 6.3:-29953431 | MS.gene80430:CDS |
AGGATATGGGATTTGATGGA+AGG | 0.523046 | 6.3:-29955747 | MS.gene80430:CDS |
GGTGTACAAATGATATCTAC+TGG | 0.525049 | 6.3:+29951918 | None:intergenic |
TGATCCAAAAGCTTGGAAAT+GGG | 0.525590 | 6.3:-29955781 | MS.gene80430:CDS |
CCTGTCCTCAGCCGTGGTTG+AGG | 0.530300 | 6.3:+29953431 | None:intergenic |
TATGGTATGTTGCGTTATAT+GGG | 0.539407 | 6.3:-29952512 | MS.gene80430:CDS |
GGAAATGGGTAATTAGAAAG+AGG | 0.540500 | 6.3:-29955767 | MS.gene80430:CDS |
GGATATGGGATTTGATGGAA+GGG | 0.547035 | 6.3:-29955746 | MS.gene80430:CDS |
TCGACGAGCTTCTGCGTCGA+GGG | 0.548360 | 6.3:+29955842 | None:intergenic |
CAAAGAAGCTTGTAGAAGGA+AGG | 0.550268 | 6.3:+29951801 | None:intergenic |
GGAAGCCTGTACTTCTGTTG+GGG | 0.552921 | 6.3:-29953360 | MS.gene80430:CDS |
TCAACACTAGTTGTTACCTC+AGG | 0.563225 | 6.3:-29952476 | MS.gene80430:intron |
CACAGGTGCTCGATTAGGAA+AGG | 0.564387 | 6.3:-29953252 | MS.gene80430:CDS |
CTCGACGAGCTTCTGCGTCG+AGG | 0.571275 | 6.3:+29955841 | None:intergenic |
TGATATCTACTGGTACATCA+TGG | 0.573249 | 6.3:+29951928 | None:intergenic |
AGAAATCTGACTTGTTTCTG+AGG | 0.583571 | 6.3:+29954292 | None:intergenic |
TATCATTTGTACACCAACTC+AGG | 0.586302 | 6.3:-29951910 | MS.gene80430:intron |
TAACTCCTCAACCACGGCTG+AGG | 0.589739 | 6.3:-29953436 | MS.gene80430:CDS |
ACAGGTGCTCGATTAGGAAA+GGG | 0.589862 | 6.3:-29953251 | MS.gene80430:CDS |
TGCTCGATTAGGAAAGGGAG+AGG | 0.600130 | 6.3:-29953246 | MS.gene80430:intron |
AGTGCATGACTGCCAATTGG+TGG | 0.605351 | 6.3:-29951979 | MS.gene80430:CDS |
AGAAGCTCGTCGAGCAATGG+CGG | 0.611097 | 6.3:-29955832 | MS.gene80430:CDS |
GTCGCTGTTGACCCGAACAC+AGG | 0.615234 | 6.3:-29953269 | MS.gene80430:CDS |
AGTTTGAATGAAATGGAAGT+GGG | 0.628273 | 6.3:+29955933 | None:intergenic |
TCGAGCAATGGCGGTCGAGG+AGG | 0.636047 | 6.3:-29955823 | MS.gene80430:CDS |
CAACAAAGCTTCCTTCAATG+AGG | 0.640413 | 6.3:-29955889 | MS.gene80430:CDS |
CCGCGATGCACAATGTGTGA+AGG | 0.680082 | 6.3:-29954329 | MS.gene80430:CDS |
CCTTCACACATTGTGCATCG+CGG | 0.691529 | 6.3:+29954329 | None:intergenic |
AATTGTTAACTCCTCAACCA+CGG | 0.699483 | 6.3:-29953442 | MS.gene80430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATATAGTTACAATAAA+AGG | + | chr6.3:29955121-29955140 | None:intergenic | 10.0% |
!!! | AATTTACCATTTTATAAATT+TGG | + | chr6.3:29952405-29952424 | None:intergenic | 10.0% |
!!! | ATTTACCATTTTATAAATTT+GGG | + | chr6.3:29952404-29952423 | None:intergenic | 10.0% |
!! | ATATATATTTAGTGTATGTT+TGG | - | chr6.3:29952319-29952338 | MS.gene80430:intron | 15.0% |
!! | GAATTAAATTACATGATTAA+AGG | - | chr6.3:29952785-29952804 | MS.gene80430:intron | 15.0% |
!! | TAATTTCTATGGTATAAAAT+AGG | + | chr6.3:29954860-29954879 | None:intergenic | 15.0% |
!! | TTATTAGCATTATTAGATAT+AGG | - | chr6.3:29953659-29953678 | MS.gene80430:intron | 15.0% |
!! | TTTATAATATTTAAACAAGC+AGG | + | chr6.3:29955040-29955059 | None:intergenic | 15.0% |
!!! | AAAAATTGGTTTTGTTAAAT+TGG | - | chr6.3:29952354-29952373 | MS.gene80430:intron | 15.0% |
!!! | ACTCTTGATTTTTAAATTAA+TGG | - | chr6.3:29953863-29953882 | MS.gene80430:intron | 15.0% |
!! | AAAGTAGATCTTATTGTTAT+TGG | - | chr6.3:29954490-29954509 | MS.gene80430:intron | 20.0% |
!! | ACAAAATTTCTGTTACATAA+AGG | + | chr6.3:29954190-29954209 | None:intergenic | 20.0% |
!! | ATAAGAATGAGTAATTTCTA+TGG | + | chr6.3:29954871-29954890 | None:intergenic | 20.0% |
!! | CAAAATTTCTGTTACATAAA+GGG | + | chr6.3:29954189-29954208 | None:intergenic | 20.0% |
!! | CATCTATAGTAAAGTTAAAA+TGG | + | chr6.3:29954119-29954138 | None:intergenic | 20.0% |
!! | CTATTCTATACAATAACTAT+TGG | + | chr6.3:29955168-29955187 | None:intergenic | 20.0% |
!! | TGCTAATAAAAATCAAATTG+TGG | + | chr6.3:29953648-29953667 | None:intergenic | 20.0% |
!!! | AGATTTTATATCATTTTTCG+TGG | - | chr6.3:29954077-29954096 | MS.gene80430:intron | 20.0% |
!!! | CACAAATTTTGTTTTTGAAA+AGG | - | chr6.3:29955445-29955464 | MS.gene80430:intron | 20.0% |
!!! | CTCTTACTTTTGTAAATTTA+GGG | - | chr6.3:29952678-29952697 | MS.gene80430:intron | 20.0% |
!!! | CTTATAAATTGATTTGAACT+TGG | - | chr6.3:29952887-29952906 | MS.gene80430:intron | 20.0% |
!!! | CTTTTCAAAAACAAAATTTG+TGG | + | chr6.3:29955447-29955466 | None:intergenic | 20.0% |
!!! | TCTCTTACTTTTGTAAATTT+AGG | - | chr6.3:29952677-29952696 | MS.gene80430:intron | 20.0% |
!!! | TCTTACTTTTGTAAATTTAG+GGG | - | chr6.3:29952679-29952698 | MS.gene80430:intron | 20.0% |
! | AAACAGATTCTTGAAAAGAT+AGG | + | chr6.3:29952836-29952855 | None:intergenic | 25.0% |
! | AACAGATTCTTGAAAAGATA+GGG | + | chr6.3:29952835-29952854 | None:intergenic | 25.0% |
! | AATTACAGGAATAAGAGATT+AGG | - | chr6.3:29953824-29953843 | MS.gene80430:intron | 25.0% |
! | ACTCTTCTACCATAAAAATT+GGG | + | chr6.3:29955575-29955594 | None:intergenic | 25.0% |
! | ATAACCATAGGAAATGTAAA+AGG | + | chr6.3:29954578-29954597 | None:intergenic | 25.0% |
! | ATGTTCTAACAATCAAATTG+TGG | + | chr6.3:29953724-29953743 | None:intergenic | 25.0% |
! | CATAAACAATGATTAAAGCA+TGG | + | chr6.3:29955421-29955440 | None:intergenic | 25.0% |
! | CATTTATGACATGTTCAAAA+TGG | + | chr6.3:29952590-29952609 | None:intergenic | 25.0% |
! | CTTAACAACATTATTGACAT+AGG | + | chr6.3:29954649-29954668 | None:intergenic | 25.0% |
! | GAGTCAAATATGTTAACTTT+GGG | - | chr6.3:29954394-29954413 | MS.gene80430:intron | 25.0% |
! | GATTGATTAAACATAACCAT+AGG | + | chr6.3:29954590-29954609 | None:intergenic | 25.0% |
! | TCTATAACTTTCATTTCAGT+TGG | + | chr6.3:29954231-29954250 | None:intergenic | 25.0% |
! | TGAGTCAAATATGTTAACTT+TGG | - | chr6.3:29954393-29954412 | MS.gene80430:intron | 25.0% |
! | TTGGTCCCAAATTTATAAAA+TGG | - | chr6.3:29952396-29952415 | MS.gene80430:intron | 25.0% |
! | TTTACAACTTATAGCATGTT+TGG | + | chr6.3:29954058-29954077 | None:intergenic | 25.0% |
! | TTTAGAAACAAAAGTTTCCA+AGG | - | chr6.3:29953955-29953974 | MS.gene80430:intron | 25.0% |
!! | ATAGATGCCTTTTAGATTTA+TGG | - | chr6.3:29954132-29954151 | MS.gene80430:intron | 25.0% |
!! | ATCTTTTCATCTAATCCAAT+TGG | + | chr6.3:29954469-29954488 | None:intergenic | 25.0% |
!! | ATGTAACATTCAAGTTCATA+AGG | + | chr6.3:29955211-29955230 | None:intergenic | 25.0% |
!! | CCAAGAAAAATTGAACTTTT+AGG | + | chr6.3:29954799-29954818 | None:intergenic | 25.0% |
!! | CCTAAAAGTTCAATTTTTCT+TGG | - | chr6.3:29954796-29954815 | MS.gene80430:intron | 25.0% |
!! | CGTTTTCAGAACTATATTTA+AGG | + | chr6.3:29952563-29952582 | None:intergenic | 25.0% |
!! | GTAAGATCTTTTCAATATGA+AGG | - | chr6.3:29953744-29953763 | MS.gene80430:intron | 25.0% |
!! | TTAATGCAATTGAGCAATTT+TGG | - | chr6.3:29952377-29952396 | MS.gene80430:intron | 25.0% |
!! | TTTTCCTGTTATTCATCAAA+AGG | - | chr6.3:29954618-29954637 | MS.gene80430:intron | 25.0% |
!!! | CATCTTTTTTGGTGAAATTT+TGG | - | chr6.3:29953337-29953356 | MS.gene80430:CDS | 25.0% |
!!! | GTTTGTTTTGTTAGGTAATT+AGG | - | chr6.3:29953289-29953308 | MS.gene80430:CDS | 25.0% |
!!! | TATCTTTTCAAGAATCTGTT+TGG | - | chr6.3:29952835-29952854 | MS.gene80430:intron | 25.0% |
!!! | TTTTTGGTGAAATTTTGGTA+GGG | - | chr6.3:29953342-29953361 | MS.gene80430:CDS | 25.0% |
!!! | TTTTTTGGTGAAATTTTGGT+AGG | - | chr6.3:29953341-29953360 | MS.gene80430:CDS | 25.0% |
AACAAGTCAACAATCACAAA+AGG | + | chr6.3:29953608-29953627 | None:intergenic | 30.0% | |
AACAATGATTAAAGCATGGA+AGG | + | chr6.3:29955417-29955436 | None:intergenic | 30.0% | |
AAGAACCAAAACAGGATTAA+AGG | + | chr6.3:29955672-29955691 | None:intergenic | 30.0% | |
AAGAATGTATCATACACTTC+CGG | - | chr6.3:29953036-29953055 | MS.gene80430:intron | 30.0% | |
AATCAAACAAGAACCAAAAC+AGG | + | chr6.3:29955680-29955699 | None:intergenic | 30.0% | |
AATGTTACATCAACTAAGAG+AGG | - | chr6.3:29955221-29955240 | MS.gene80430:intron | 30.0% | |
ACCAAAAAAGATGAATCAGA+AGG | + | chr6.3:29953330-29953349 | None:intergenic | 30.0% | |
AGGAATTAATTGATGTGTGT+GGG | - | chr6.3:29953403-29953422 | MS.gene80430:CDS | 30.0% | |
AGTGAAATCTCTTCTTTACA+AGG | - | chr6.3:29955606-29955625 | MS.gene80430:intron | 30.0% | |
AGTTTGAATGAAATGGAAGT+GGG | + | chr6.3:29951856-29951875 | None:intergenic | 30.0% | |
ATAAAACATCAACAGAAACC+TGG | + | chr6.3:29953099-29953118 | None:intergenic | 30.0% | |
ATATGGTATGTTGCGTTATA+TGG | - | chr6.3:29955273-29955292 | MS.gene80430:intron | 30.0% | |
ATCTAACACGTATGTGAAAT+CGG | - | chr6.3:29954724-29954743 | MS.gene80430:intron | 30.0% | |
ATTACGCTTAACAATCATCA+TGG | + | chr6.3:29953146-29953165 | None:intergenic | 30.0% | |
CTGTTACATCTAATGTTCAA+GGG | + | chr6.3:29952756-29952775 | None:intergenic | 30.0% | |
GAAATAGCAGAAGAGTAAAA+GGG | - | chr6.3:29953681-29953700 | MS.gene80430:intron | 30.0% | |
GAAGTGTATGATACATTCTT+AGG | + | chr6.3:29953036-29953055 | None:intergenic | 30.0% | |
GACTCTTCTACCATAAAAAT+TGG | + | chr6.3:29955576-29955595 | None:intergenic | 30.0% | |
GCAATCACCATAAATCTAAA+AGG | + | chr6.3:29954142-29954161 | None:intergenic | 30.0% | |
GGTAATTAGAAAGAGGATAT+GGG | - | chr6.3:29952026-29952045 | MS.gene80430:intron | 30.0% | |
GGTTAGATAGGTACTTTATT+TGG | - | chr6.3:29953527-29953546 | MS.gene80430:intron | 30.0% | |
GTAAATGATGTTCAGTTAAC+TGG | + | chr6.3:29952959-29952978 | None:intergenic | 30.0% | |
GTAGTATGATCATAAAACGT+AGG | + | chr6.3:29954926-29954945 | None:intergenic | 30.0% | |
TAGGAATTAATTGATGTGTG+TGG | - | chr6.3:29953402-29953421 | MS.gene80430:CDS | 30.0% | |
TAGGTTAAAAGACCAGTTTA+AGG | + | chr6.3:29954841-29954860 | None:intergenic | 30.0% | |
TATGGTATGTTGCGTTATAT+GGG | - | chr6.3:29955274-29955293 | MS.gene80430:intron | 30.0% | |
TCAAGATCAAAATCCTACTT+AGG | + | chr6.3:29954965-29954984 | None:intergenic | 30.0% | |
TCTGTTACATCTAATGTTCA+AGG | + | chr6.3:29952757-29952776 | None:intergenic | 30.0% | |
TGAACATTAGATGTAACAGA+GGG | - | chr6.3:29952757-29952776 | MS.gene80430:intron | 30.0% | |
TGAATCAGAAGGAAGATTAT+AGG | + | chr6.3:29953319-29953338 | None:intergenic | 30.0% | |
TTGAACATTAGATGTAACAG+AGG | - | chr6.3:29952756-29952775 | MS.gene80430:intron | 30.0% | |
TTTAGATTTATGGTGATTGC+TGG | - | chr6.3:29954142-29954161 | MS.gene80430:intron | 30.0% | |
TTTGTAAAAATGACCTGAGT+TGG | + | chr6.3:29955892-29955911 | None:intergenic | 30.0% | |
! | AACACCTTTTACATTTCCTA+TGG | - | chr6.3:29954571-29954590 | MS.gene80430:intron | 30.0% |
! | ATTTTCTTCCTTTATACTGC+TGG | - | chr6.3:29953010-29953029 | MS.gene80430:intron | 30.0% |
! | CTTTATTTGGAGTTTGTGTA+TGG | - | chr6.3:29953540-29953559 | MS.gene80430:intron | 30.0% |
! | TGATCCTTTTGATGAATAAC+AGG | + | chr6.3:29954625-29954644 | None:intergenic | 30.0% |
! | TTTTTATGGTAGAAGAGTCT+AGG | - | chr6.3:29955577-29955596 | MS.gene80430:intron | 30.0% |
!!! | CGATTTTTTTCTTCTCGTTT+TGG | - | chr6.3:29954278-29954297 | MS.gene80430:intron | 30.0% |
!!! | TCCTTCTGATTCATCTTTTT+TGG | - | chr6.3:29953326-29953345 | MS.gene80430:CDS | 30.0% |
!!! | TTGTCACTGTTTGTTTTGTT+AGG | - | chr6.3:29953281-29953300 | MS.gene80430:CDS | 30.0% |
AAAACAGGATTAAAGGACAG+GGG | + | chr6.3:29955665-29955684 | None:intergenic | 35.0% | |
AAAGAGGATATGGGATTTGA+TGG | - | chr6.3:29952035-29952054 | MS.gene80430:intron | 35.0% | |
AAATCCTACTTAGGATCATG+AGG | + | chr6.3:29954956-29954975 | None:intergenic | 35.0% | |
AACTAGCACTTCTGTTGTTA+TGG | - | chr6.3:29952614-29952633 | MS.gene80430:intron | 35.0% | |
AAGCAGTAAACAGATTCTTG+AGG | + | chr6.3:29952870-29952889 | None:intergenic | 35.0% | |
AAGCGAATCACTCAATTTAG+AGG | - | chr6.3:29953910-29953929 | MS.gene80430:intron | 35.0% | |
AATTGCTAAGATTGCGAGAT+TGG | - | chr6.3:29954758-29954777 | MS.gene80430:intron | 35.0% | |
AATTGTTAACTCCTCAACCA+CGG | - | chr6.3:29954344-29954363 | MS.gene80430:CDS | 35.0% | |
ACACGGAAATGTTCTAATCA+CGG | + | chr6.3:29953169-29953188 | None:intergenic | 35.0% | |
ACGATCAATATTTGTGCAGA+TGG | - | chr6.3:29954316-29954335 | MS.gene80430:CDS | 35.0% | |
AGAGATTAGGATCCTCTAAA+TGG | - | chr6.3:29953837-29953856 | MS.gene80430:intron | 35.0% | |
AGTTGATCTCTATTCTATCC+AGG | + | chr6.3:29952536-29952555 | None:intergenic | 35.0% | |
ATCAAGAGTAGACCATTTAG+AGG | + | chr6.3:29953852-29953871 | None:intergenic | 35.0% | |
ATGATCCAAAAGCTTGGAAA+TGG | - | chr6.3:29952004-29952023 | MS.gene80430:intron | 35.0% | |
CAAAACAGGATTAAAGGACA+GGG | + | chr6.3:29955666-29955685 | None:intergenic | 35.0% | |
CAATCAAAGAAGCTTGTAGA+AGG | + | chr6.3:29955992-29956011 | None:intergenic | 35.0% | |
CACTTCCATTTCATTCAAAC+TGG | - | chr6.3:29951855-29951874 | MS.gene80430:intron | 35.0% | |
CAGCAACAAAGAAGAATTAC+AGG | - | chr6.3:29953810-29953829 | MS.gene80430:intron | 35.0% | |
CAGTTAGTTACTAGCATAGT+AGG | - | chr6.3:29953253-29953272 | MS.gene80430:CDS | 35.0% | |
CAGTTTGAATGAAATGGAAG+TGG | + | chr6.3:29951857-29951876 | None:intergenic | 35.0% | |
CTAAAGTGCATAGTTGAGTT+TGG | - | chr6.3:29952714-29952733 | MS.gene80430:intron | 35.0% | |
GATTCTTGAAAAGATAGGGA+TGG | + | chr6.3:29952831-29952850 | None:intergenic | 35.0% | |
GCTTGTGCGATATTAGATAT+TGG | + | chr6.3:29955071-29955090 | None:intergenic | 35.0% | |
GGAAATAGCAGAAGAGTAAA+AGG | - | chr6.3:29953680-29953699 | MS.gene80430:intron | 35.0% | |
GGAAATGGGTAATTAGAAAG+AGG | - | chr6.3:29952019-29952038 | MS.gene80430:intron | 35.0% | |
GGATTTGCAGAACTTGAATA+TGG | - | chr6.3:29955256-29955275 | MS.gene80430:intron | 35.0% | |
GGGTAATTAGAAAGAGGATA+TGG | - | chr6.3:29952025-29952044 | MS.gene80430:intron | 35.0% | |
GGTGTACAAATGATATCTAC+TGG | + | chr6.3:29955871-29955890 | None:intergenic | 35.0% | |
GTTTCTAAACACTCTTGTTC+TGG | + | chr6.3:29953944-29953963 | None:intergenic | 35.0% | |
TAACAGGAAGAATCTAGACA+CGG | + | chr6.3:29953186-29953205 | None:intergenic | 35.0% | |
TACTCATTCTTATGCAAGAC+CGG | - | chr6.3:29954878-29954897 | MS.gene80430:intron | 35.0% | |
TATCATTTGTACACCAACTC+AGG | - | chr6.3:29955876-29955895 | MS.gene80430:CDS | 35.0% | |
TCCTGTTAGTTATGAAAGCT+AGG | - | chr6.3:29953198-29953217 | MS.gene80430:intron | 35.0% | |
TCTCTTCTTTACAAGGACAA+CGG | - | chr6.3:29955613-29955632 | MS.gene80430:intron | 35.0% | |
TGATATCTACTGGTACATCA+TGG | + | chr6.3:29955861-29955880 | None:intergenic | 35.0% | |
TGATCCAAAAGCTTGGAAAT+GGG | - | chr6.3:29952005-29952024 | MS.gene80430:intron | 35.0% | |
TTAGGAATCCTATGATGAAC+AGG | + | chr6.3:29952090-29952109 | None:intergenic | 35.0% | |
TTCTACCATAAAAATTGGGC+TGG | + | chr6.3:29955571-29955590 | None:intergenic | 35.0% | |
! | AAATTAGTCGGTTCTTGGAT+AGG | - | chr6.3:29952450-29952469 | MS.gene80430:intron | 35.0% |
! | AGAGAAGCACGAACAAAATT+AGG | + | chr6.3:29952108-29952127 | None:intergenic | 35.0% |
! | ATTACCCATTTCCAAGCTTT+TGG | + | chr6.3:29952012-29952031 | None:intergenic | 35.0% |
! | GAAATTTTTCACCAACCTTG+AGG | + | chr6.3:29955931-29955950 | None:intergenic | 35.0% |
! | GTTGTTACCTCAGGTAATTT+TGG | - | chr6.3:29955319-29955338 | MS.gene80430:intron | 35.0% |
! | TAGTCAAATTAGTCGGTTCT+TGG | - | chr6.3:29952445-29952464 | MS.gene80430:intron | 35.0% |
! | TGGATTAACAGCTTTTCAAC+TGG | + | chr6.3:29955841-29955860 | None:intergenic | 35.0% |
! | TGTTGTTTACAGAAAGTGAC+TGG | - | chr6.3:29955544-29955563 | MS.gene80430:intron | 35.0% |
!! | AGAAATCTGACTTGTTTCTG+AGG | + | chr6.3:29953497-29953516 | None:intergenic | 35.0% |
!! | AGCATGTTTGGAATTGCTTT+TGG | + | chr6.3:29954046-29954065 | None:intergenic | 35.0% |
!! | ATGTTTGGAATTGCTTTTGG+AGG | + | chr6.3:29954043-29954062 | None:intergenic | 35.0% |
!! | GAAGGTATCTATGACTATGA+TGG | - | chr6.3:29953762-29953781 | MS.gene80430:intron | 35.0% |
!! | TGTTGCTTGTGATTTTGAGT+AGG | - | chr6.3:29953383-29953402 | MS.gene80430:CDS | 35.0% |
!! | TTAGTGTATGTTTGGTTCTG+CGG | - | chr6.3:29952327-29952346 | MS.gene80430:intron | 35.0% |
AGGATATGGGATTTGATGGA+AGG | - | chr6.3:29952039-29952058 | MS.gene80430:intron | 40.0% | |
ATCACTCAATTTAGAGGAGC+CGG | - | chr6.3:29953916-29953935 | MS.gene80430:intron | 40.0% | |
ATCCTAGACCTGTTCATCAT+AGG | - | chr6.3:29952079-29952098 | MS.gene80430:intron | 40.0% | |
ATCCTATGATGAACAGGTCT+AGG | + | chr6.3:29952084-29952103 | None:intergenic | 40.0% | |
CAAAGAAGCTTGTAGAAGGA+AGG | + | chr6.3:29955988-29956007 | None:intergenic | 40.0% | |
CAACAAAGCTTCCTTCAATG+AGG | - | chr6.3:29951897-29951916 | MS.gene80430:intron | 40.0% | |
CCAAAACAGGATTAAAGGAC+AGG | + | chr6.3:29955667-29955686 | None:intergenic | 40.0% | |
GACGCGTTAGTCAAATTAGT+CGG | - | chr6.3:29952438-29952457 | MS.gene80430:intron | 40.0% | |
GCAAGAACCAAAATTACCTG+AGG | + | chr6.3:29955329-29955348 | None:intergenic | 40.0% | |
GCTGAACAAATTAGAGTGAC+CGG | + | chr6.3:29953058-29953077 | None:intergenic | 40.0% | |
GGATATGGGATTTGATGGAA+GGG | - | chr6.3:29952040-29952059 | MS.gene80430:intron | 40.0% | |
GGCTTCCAGTTTGAATGAAA+TGG | + | chr6.3:29951863-29951882 | None:intergenic | 40.0% | |
GTACATGTCTGTGTCGTATT+CGG | - | chr6.3:29952217-29952236 | MS.gene80430:intron | 40.0% | |
GTCAATCGAATTGATGAACC+TGG | - | chr6.3:29952515-29952534 | MS.gene80430:CDS | 40.0% | |
GTCAGATTTCTCACTCTTTC+AGG | - | chr6.3:29953506-29953525 | MS.gene80430:intron | 40.0% | |
GTTAACTTTGGGTACCATCA+AGG | - | chr6.3:29954405-29954424 | MS.gene80430:intron | 40.0% | |
TAAAGAGGAGAGAGAGTGAA+TGG | + | chr6.3:29951811-29951830 | None:intergenic | 40.0% | |
TAAAGGACAGGGGAAGATAT+CGG | + | chr6.3:29955655-29955674 | None:intergenic | 40.0% | |
TAAGAGAGGATTGAAGTGCA+GGG | - | chr6.3:29955235-29955254 | MS.gene80430:intron | 40.0% | |
TACTTAGGATCATGAGGAAG+AGG | + | chr6.3:29954950-29954969 | None:intergenic | 40.0% | |
TCAACACTAGTTGTTACCTC+AGG | - | chr6.3:29955310-29955329 | MS.gene80430:intron | 40.0% | |
TCAGAGAACTCTTCATCTTG+AGG | + | chr6.3:29954005-29954024 | None:intergenic | 40.0% | |
TCCAATTGGTCGACCATATT+TGG | + | chr6.3:29954455-29954474 | None:intergenic | 40.0% | |
TCTGTGTCGTATTCGGTATT+CGG | - | chr6.3:29952224-29952243 | MS.gene80430:intron | 40.0% | |
TCTTCCTCATGATCCTAAGT+AGG | - | chr6.3:29954949-29954968 | MS.gene80430:intron | 40.0% | |
TGATAAGGTATGCTGGTGAA+TGG | - | chr6.3:29952134-29952153 | MS.gene80430:intron | 40.0% | |
TGGTTGAACATATTCGACGT+TGG | - | chr6.3:29955508-29955527 | MS.gene80430:intron | 40.0% | |
TTCTTAGGCCAGCAGTATAA+AGG | + | chr6.3:29953021-29953040 | None:intergenic | 40.0% | |
TTTACGAACTTACAGCCACT+GGG | - | chr6.3:29954699-29954718 | MS.gene80430:intron | 40.0% | |
TTTCCTTAGCCATTCCTCAA+AGG | - | chr6.3:29955359-29955378 | MS.gene80430:intron | 40.0% | |
TTTGGAGGATGCTGAACATT+TGG | + | chr6.3:29954028-29954047 | None:intergenic | 40.0% | |
! | AAACACTCTTGTTCTGGATC+CGG | + | chr6.3:29953938-29953957 | None:intergenic | 40.0% |
! | ACATCTTTGAGAAGCCTTTG+AGG | + | chr6.3:29955376-29955395 | None:intergenic | 40.0% |
! | CCTGTCCTTTAATCCTGTTT+TGG | - | chr6.3:29955664-29955683 | MS.gene80430:intron | 40.0% |
! | CGCTAATCGATTCCTTAAAC+TGG | - | chr6.3:29954826-29954845 | MS.gene80430:intron | 40.0% |
! | GCCTAGCTTTCATAACTAAC+AGG | + | chr6.3:29953202-29953221 | None:intergenic | 40.0% |
! | GGGAAGATATCGGAACATTT+TGG | + | chr6.3:29955645-29955664 | None:intergenic | 40.0% |
! | GTAACAAGCATCGTAAGATC+CGG | + | chr6.3:29954900-29954919 | None:intergenic | 40.0% |
! | GTGGGTTTTTATGCAGATGA+GGG | - | chr6.3:29953421-29953440 | MS.gene80430:CDS | 40.0% |
! | TGTGGGTTTTTATGCAGATG+AGG | - | chr6.3:29953420-29953439 | MS.gene80430:CDS | 40.0% |
! | TTTGAGAAGCCTTTGAGGAA+TGG | + | chr6.3:29955371-29955390 | None:intergenic | 40.0% |
! | TTTGTGTATGGTGTTGAGCA+GGG | - | chr6.3:29953552-29953571 | MS.gene80430:intron | 40.0% |
! | TTTTACGAACTTACAGCCAC+TGG | - | chr6.3:29954698-29954717 | MS.gene80430:intron | 40.0% |
!! | ACTTGTTTCTGAGGAGAATC+TGG | + | chr6.3:29953488-29953507 | None:intergenic | 40.0% |
!! | AGCTTTGTTGTTGTTGCTGT+TGG | + | chr6.3:29951887-29951906 | None:intergenic | 40.0% |
!! | CTCACTCTTTCAGGTTAGAT+AGG | - | chr6.3:29953515-29953534 | MS.gene80430:intron | 40.0% |
!! | TTTGTTGTTGTTGCTGTTGG+TGG | + | chr6.3:29951884-29951903 | None:intergenic | 40.0% |
!!! | AATGGAAGTGGGTTGTTTTG+TGG | + | chr6.3:29951845-29951864 | None:intergenic | 40.0% |
AAGGAAGCCTGTACTTCTGT+TGG | - | chr6.3:29954424-29954443 | MS.gene80430:intron | 45.0% | |
ACAGGTGCTCGATTAGGAAA+GGG | - | chr6.3:29954535-29954554 | MS.gene80430:intron | 45.0% | |
ACATCAACAGAAACCTGGTC+TGG | + | chr6.3:29953094-29953113 | None:intergenic | 45.0% | |
ACATCCATTCCAAAGCCTCA+AGG | - | chr6.3:29955913-29955932 | MS.gene80430:CDS | 45.0% | |
AGGAAGCCTGTACTTCTGTT+GGG | - | chr6.3:29954425-29954444 | MS.gene80430:intron | 45.0% | |
AGGGTCTAGTCTAATACAGC+AGG | + | chr6.3:29954170-29954189 | None:intergenic | 45.0% | |
CGTGAAACAAGACTCAGTGT+CGG | + | chr6.3:29955097-29955116 | None:intergenic | 45.0% | |
CTAAGAGAGGATTGAAGTGC+AGG | - | chr6.3:29955234-29955253 | MS.gene80430:intron | 45.0% | |
CTCAAAAGCAGCCTCATTGA+AGG | + | chr6.3:29951911-29951930 | None:intergenic | 45.0% | |
CTGGAATGTCATCCACCAAT+TGG | + | chr6.3:29955822-29955841 | None:intergenic | 45.0% | |
CTGGTTAGAAAAGTCTGCCT+CGG | - | chr6.3:29955002-29955021 | MS.gene80430:intron | 45.0% | |
GAGAACATTGTCTGTGATCC+TGG | - | chr6.3:29954983-29955002 | MS.gene80430:intron | 45.0% | |
GCCAAATATGGTCGACCAAT+TGG | - | chr6.3:29954451-29954470 | MS.gene80430:intron | 45.0% | |
GGTTCTGCGGTGACAAAAAT+TGG | - | chr6.3:29952340-29952359 | MS.gene80430:intron | 45.0% | |
TACAGTGCATGACTGCCAAT+TGG | - | chr6.3:29955804-29955823 | MS.gene80430:CDS | 45.0% | |
TCTGTTGGGGTTGCCAAATA+TGG | - | chr6.3:29954439-29954458 | MS.gene80430:intron | 45.0% | |
TGCGAGATGATCCAAAAGCT+TGG | - | chr6.3:29951998-29952017 | MS.gene80430:intron | 45.0% | |
TGCTTCTCTTGCTGCTGATA+AGG | - | chr6.3:29952119-29952138 | MS.gene80430:intron | 45.0% | |
TGTCTCTCTTGCTGCTGATA+AGG | - | chr6.3:29952253-29952272 | MS.gene80430:intron | 45.0% | |
TTGCTGCTGATAAGGTATGC+TGG | - | chr6.3:29952127-29952146 | MS.gene80430:intron | 45.0% | |
TTTCACCAACCTTGAGGCTT+TGG | + | chr6.3:29955925-29955944 | None:intergenic | 45.0% | |
! | AAGCCTTTGAGGAATGGCTA+AGG | + | chr6.3:29955365-29955384 | None:intergenic | 45.0% |
! | AGAAGTACAGGCTTCCTTGA+TGG | + | chr6.3:29954422-29954441 | None:intergenic | 45.0% |
! | CTGGTCCAGCCCAATTTTTA+TGG | - | chr6.3:29955563-29955582 | MS.gene80430:intron | 45.0% |
! | GTTTGTGTATGGTGTTGAGC+AGG | - | chr6.3:29953551-29953570 | MS.gene80430:intron | 45.0% |
!! | AATTTTGGTAGGGCGTGGAA+TGG | - | chr6.3:29953352-29953371 | MS.gene80430:CDS | 45.0% |
!! | ATTTTGGTAGGGCGTGGAAT+GGG | - | chr6.3:29953353-29953372 | MS.gene80430:CDS | 45.0% |
!! | CGACACTGAGTCTTGTTTCA+CGG | - | chr6.3:29955095-29955114 | MS.gene80430:intron | 45.0% |
!! | GTTGTTTTGTGGAGAGAGAG+CGG | + | chr6.3:29951834-29951853 | None:intergenic | 45.0% |
!! | TGAAGTATTGACACCAGACC+AGG | - | chr6.3:29953078-29953097 | MS.gene80430:intron | 45.0% |
!!! | CTTCAATGAGGCTGCTTTTG+AGG | - | chr6.3:29951909-29951928 | MS.gene80430:intron | 45.0% |
!! | AAAAAAAAAAAAAATCAAAT+TGG | - | chr6.3:29952485-29952504 | MS.gene80430:CDS | 5.0% |
!!! | ATATGTAAAAATTATTATTT+TGG | - | chr6.3:29955488-29955507 | MS.gene80430:intron | 5.0% |
AAAAAACCTGTCCTCAGCCG+TGG | + | chr6.3:29954364-29954383 | None:intergenic | 50.0% | |
AGTGCATGACTGCCAATTGG+TGG | - | chr6.3:29955807-29955826 | MS.gene80430:CDS | 50.0% | |
ATACGTGTTAGATCGCCCAG+TGG | + | chr6.3:29954717-29954736 | None:intergenic | 50.0% | |
CACAGGTGCTCGATTAGGAA+AGG | - | chr6.3:29954534-29954553 | MS.gene80430:intron | 50.0% | |
CCATTCCAAAGCCTCAAGGT+TGG | - | chr6.3:29955917-29955936 | MS.gene80430:CDS | 50.0% | |
CCTAATCGAGCACCTGTGTT+CGG | + | chr6.3:29954532-29954551 | None:intergenic | 50.0% | |
CCTTCACACATTGTGCATCG+CGG | + | chr6.3:29953460-29953479 | None:intergenic | 50.0% | |
CTAATCGAGCACCTGTGTTC+GGG | + | chr6.3:29954531-29954550 | None:intergenic | 50.0% | |
GGAAGCCTGTACTTCTGTTG+GGG | - | chr6.3:29954426-29954445 | MS.gene80430:intron | 50.0% | |
TGCTCGATTAGGAAAGGGAG+AGG | - | chr6.3:29954540-29954559 | MS.gene80430:intron | 50.0% | |
! | CGAGGCAGACTTTTCTAACC+AGG | + | chr6.3:29955004-29955023 | None:intergenic | 50.0% |
! | TGTATGGTGTTGAGCAGGGA+GGG | - | chr6.3:29953556-29953575 | MS.gene80430:intron | 50.0% |
!! | CCAACCTTGAGGCTTTGGAA+TGG | + | chr6.3:29955920-29955939 | None:intergenic | 50.0% |
!! | GGTGAAATTTTGGTAGGGCG+TGG | - | chr6.3:29953347-29953366 | MS.gene80430:CDS | 50.0% |
!!! | CAATGAGGCTGCTTTTGAGG+CGG | - | chr6.3:29951912-29951931 | MS.gene80430:CDS | 50.0% |
AGAAGCTCGTCGAGCAATGG+CGG | - | chr6.3:29951954-29951973 | MS.gene80430:CDS | 55.0% | |
CCGAACACAGGTGCTCGATT+AGG | - | chr6.3:29954529-29954548 | MS.gene80430:intron | 55.0% | |
CCGCGATGCACAATGTGTGA+AGG | - | chr6.3:29953457-29953476 | MS.gene80430:intron | 55.0% | |
GACAGCTCAAGCTGAGGCAA+AGG | - | chr6.3:29953979-29953998 | MS.gene80430:intron | 55.0% | |
GTGGAGAGAGAGCGGTAAAG+AGG | + | chr6.3:29951826-29951845 | None:intergenic | 55.0% | |
TAACTCCTCAACCACGGCTG+AGG | - | chr6.3:29954350-29954369 | MS.gene80430:CDS | 55.0% | |
! | GGCAACCCCAACAGAAGTAC+AGG | + | chr6.3:29954434-29954453 | None:intergenic | 55.0% |
! | GTATGGTGTTGAGCAGGGAG+GGG | - | chr6.3:29953557-29953576 | MS.gene80430:intron | 55.0% |
! | GTGTATGGTGTTGAGCAGGG+AGG | - | chr6.3:29953555-29953574 | MS.gene80430:intron | 55.0% |
! | TATGGTGTTGAGCAGGGAGG+GGG | - | chr6.3:29953558-29953577 | MS.gene80430:intron | 55.0% |
CAAGGCGACAGCTCAAGCTG+AGG | - | chr6.3:29953973-29953992 | MS.gene80430:intron | 60.0% | |
CGCAGAAGCTCGTCGAGCAA+TGG | - | chr6.3:29951951-29951970 | MS.gene80430:CDS | 60.0% | |
CTCAGCTTGAGCTGTCGCCT+TGG | + | chr6.3:29953975-29953994 | None:intergenic | 60.0% | |
GCAGGTGAAACAGCATGCCG+AGG | + | chr6.3:29955022-29955041 | None:intergenic | 60.0% | |
GTCGCTGTTGACCCGAACAC+AGG | - | chr6.3:29954517-29954536 | MS.gene80430:intron | 60.0% | |
TCGACGAGCTTCTGCGTCGA+GGG | + | chr6.3:29951947-29951966 | None:intergenic | 60.0% | |
!!! | AGGCTGCTTTTGAGGCGGAG+CGG | - | chr6.3:29951917-29951936 | MS.gene80430:CDS | 60.0% |
CCTCAACCACGGCTGAGGAC+AGG | - | chr6.3:29954355-29954374 | MS.gene80430:intron | 65.0% | |
CCTGTCCTCAGCCGTGGTTG+AGG | + | chr6.3:29954358-29954377 | None:intergenic | 65.0% | |
CTCGACGAGCTTCTGCGTCG+AGG | + | chr6.3:29951948-29951967 | None:intergenic | 65.0% | |
GTGTTGAGCAGGGAGGGGGA+AGG | - | chr6.3:29953562-29953581 | MS.gene80430:intron | 65.0% | |
TCGAGCAATGGCGGTCGAGG+AGG | - | chr6.3:29951963-29951982 | MS.gene80430:CDS | 65.0% | |
TCGTCGAGCAATGGCGGTCG+AGG | - | chr6.3:29951960-29951979 | MS.gene80430:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 29951778 | 29956030 | 29951778 | ID=MS.gene80430 |
chr6.3 | mRNA | 29951778 | 29956030 | 29951778 | ID=MS.gene80430.t1;Parent=MS.gene80430 |
chr6.3 | exon | 29955668 | 29956030 | 29955668 | ID=MS.gene80430.t1.exon1;Parent=MS.gene80430.t1 |
chr6.3 | CDS | 29955668 | 29956030 | 29955668 | ID=cds.MS.gene80430.t1;Parent=MS.gene80430.t1 |
chr6.3 | exon | 29954281 | 29954371 | 29954281 | ID=MS.gene80430.t1.exon2;Parent=MS.gene80430.t1 |
chr6.3 | CDS | 29954281 | 29954371 | 29954281 | ID=cds.MS.gene80430.t1;Parent=MS.gene80430.t1 |
chr6.3 | exon | 29953247 | 29953473 | 29953247 | ID=MS.gene80430.t1.exon3;Parent=MS.gene80430.t1 |
chr6.3 | CDS | 29953247 | 29953473 | 29953247 | ID=cds.MS.gene80430.t1;Parent=MS.gene80430.t1 |
chr6.3 | exon | 29952477 | 29952552 | 29952477 | ID=MS.gene80430.t1.exon4;Parent=MS.gene80430.t1 |
chr6.3 | CDS | 29952477 | 29952552 | 29952477 | ID=cds.MS.gene80430.t1;Parent=MS.gene80430.t1 |
chr6.3 | exon | 29951911 | 29951999 | 29951911 | ID=MS.gene80430.t1.exon5;Parent=MS.gene80430.t1 |
chr6.3 | CDS | 29951911 | 29951999 | 29951911 | ID=cds.MS.gene80430.t1;Parent=MS.gene80430.t1 |
chr6.3 | exon | 29951778 | 29951825 | 29951778 | ID=MS.gene80430.t1.exon6;Parent=MS.gene80430.t1 |
chr6.3 | CDS | 29951778 | 29951825 | 29951778 | ID=cds.MS.gene80430.t1;Parent=MS.gene80430.t1 |
Gene Sequence |
Protein sequence |