Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211640 | G7JQV9 | 93.878 | 392 | 24 | 0 | 1 | 392 | 1 | 392 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa1211640 | 0.810004 | 1.429672e-50 | -8.615850e-47 |
| Msa0015150 | Msa1211640 | 0.824803 | 6.622461e-54 | -8.615850e-47 |
| Msa0015570 | Msa1211640 | 0.810091 | 1.369394e-50 | -8.615850e-47 |
| Msa0016040 | Msa1211640 | 0.823958 | 1.046216e-53 | -8.615850e-47 |
| Msa0020540 | Msa1211640 | 0.815330 | 9.770880e-52 | -8.615850e-47 |
| Msa0025160 | Msa1211640 | 0.838896 | 2.190006e-57 | -8.615850e-47 |
| Msa0029960 | Msa1211640 | 0.818912 | 1.529830e-52 | -8.615850e-47 |
| Msa0030070 | Msa1211640 | 0.831775 | 1.378541e-55 | -8.615850e-47 |
| Msa0030690 | Msa1211640 | 0.813967 | 1.957884e-51 | -8.615850e-47 |
| Msa0032230 | Msa1211640 | 0.807766 | 4.305422e-50 | -8.615850e-47 |
| Msa0032980 | Msa1211640 | 0.832442 | 9.431920e-56 | -8.615850e-47 |
| Msa0038940 | Msa1211640 | 0.800803 | 1.214004e-48 | -8.615850e-47 |
| Msa0040640 | Msa1211640 | 0.818514 | 1.884030e-52 | -8.615850e-47 |
| Msa0050660 | Msa1211640 | 0.801856 | 7.390504e-49 | -8.615850e-47 |
| Msa0050700 | Msa1211640 | 0.800344 | 1.506182e-48 | -8.615850e-47 |
| Msa0053070 | Msa1211640 | 0.818517 | 1.880936e-52 | -8.615850e-47 |
| Msa0062340 | Msa1211640 | 0.822566 | 2.211863e-53 | -8.615850e-47 |
| Msa0064120 | Msa1211640 | 0.810375 | 1.189381e-50 | -8.615850e-47 |
| Msa0067380 | Msa1211640 | 0.803533 | 3.332145e-49 | -8.615850e-47 |
| Msa0071850 | Msa1211640 | 0.813527 | 2.446621e-51 | -8.615850e-47 |
| Msa0071860 | Msa1211640 | 0.802475 | 5.512925e-49 | -8.615850e-47 |
| Msa0072520 | Msa1211640 | 0.867402 | 1.405128e-65 | -8.615850e-47 |
| Msa0074360 | Msa1211640 | 0.822929 | 1.820972e-53 | -8.615850e-47 |
| Msa0077560 | Msa1211640 | 0.846120 | 2.650884e-59 | -8.615850e-47 |
| Msa0078130 | Msa1211640 | 0.845570 | 3.739413e-59 | -8.615850e-47 |
| Msa0091350 | Msa1211640 | 0.834244 | 3.352687e-56 | -8.615850e-47 |
| Msa0094790 | Msa1211640 | 0.828528 | 8.550934e-55 | -8.615850e-47 |
| Msa0098410 | Msa1211640 | 0.811533 | 6.675005e-51 | -8.615850e-47 |
| Msa0108880 | Msa1211640 | 0.809828 | 1.559942e-50 | -8.615850e-47 |
| Msa0115550 | Msa1211640 | 0.815268 | 1.008311e-51 | -8.615850e-47 |
| Msa0607800 | Msa1211640 | 0.846790 | 1.740909e-59 | -8.615850e-47 |
| Msa0613630 | Msa1211640 | 0.832535 | 8.943426e-56 | -8.615850e-47 |
| Msa0615630 | Msa1211640 | 0.800057 | 1.722989e-48 | -8.615850e-47 |
| Msa0620500 | Msa1211640 | 0.805547 | 1.266490e-49 | -8.615850e-47 |
| Msa0621710 | Msa1211640 | 0.836304 | 1.011973e-56 | -8.615850e-47 |
| Msa0622920 | Msa1211640 | 0.813984 | 1.941070e-51 | -8.615850e-47 |
| Msa0647440 | Msa1211640 | 0.819542 | 1.099921e-52 | -8.615850e-47 |
| Msa0648040 | Msa1211640 | 0.833534 | 5.045632e-56 | -8.615850e-47 |
| Msa0648760 | Msa1211640 | 0.836643 | 8.297951e-57 | -8.615850e-47 |
| Msa0657210 | Msa1211640 | 0.838597 | 2.616885e-57 | -8.615850e-47 |
| Msa0657700 | Msa1211640 | 0.802502 | 5.442265e-49 | -8.615850e-47 |
| Msa0666700 | Msa1211640 | 0.824408 | 8.201589e-54 | -8.615850e-47 |
| Msa0668900 | Msa1211640 | 0.811069 | 8.418486e-51 | -8.615850e-47 |
| Msa0682770 | Msa1211640 | 0.825510 | 4.507304e-54 | -8.615850e-47 |
| Msa0687090 | Msa1211640 | 0.809008 | 2.339136e-50 | -8.615850e-47 |
| Msa0690320 | Msa1211640 | 0.805258 | 1.456254e-49 | -8.615850e-47 |
| Msa0690740 | Msa1211640 | 0.832815 | 7.621110e-56 | -8.615850e-47 |
| Msa0691270 | Msa1211640 | 0.809138 | 2.194311e-50 | -8.615850e-47 |
| Msa0701250 | Msa1211640 | 0.838537 | 2.711330e-57 | -8.615850e-47 |
| Msa0702810 | Msa1211640 | 0.806974 | 6.337593e-50 | -8.615850e-47 |
| Msa0706150 | Msa1211640 | 0.803043 | 4.208197e-49 | -8.615850e-47 |
| Msa0709440 | Msa1211640 | 0.868961 | 4.424562e-66 | -8.615850e-47 |
| Msa0714520 | Msa1211640 | 0.882797 | 7.703099e-71 | -8.615850e-47 |
| Msa0714790 | Msa1211640 | 0.800236 | 1.584293e-48 | -8.615850e-47 |
| Msa0716480 | Msa1211640 | 0.817253 | 3.629101e-52 | -8.615850e-47 |
| Msa0717900 | Msa1211640 | 0.828359 | 9.394428e-55 | -8.615850e-47 |
| Msa0719270 | Msa1211640 | 0.804276 | 2.335035e-49 | -8.615850e-47 |
| Msa0722220 | Msa1211640 | 0.803984 | 2.685554e-49 | -8.615850e-47 |
| Msa0735780 | Msa1211640 | 0.801213 | 1.000928e-48 | -8.615850e-47 |
| Msa0740710 | Msa1211640 | 0.806705 | 7.225797e-50 | -8.615850e-47 |
| Msa0743440 | Msa1211640 | 0.843698 | 1.194000e-58 | -8.615850e-47 |
| Msa0745720 | Msa1211640 | 0.836229 | 1.057501e-56 | -8.615850e-47 |
| Msa0747740 | Msa1211640 | 0.819494 | 1.127850e-52 | -8.615850e-47 |
| Msa0754430 | Msa1211640 | 0.811452 | 6.952801e-51 | -8.615850e-47 |
| Msa0754450 | Msa1211640 | 0.832822 | 7.590795e-56 | -8.615850e-47 |
| Msa0763550 | Msa1211640 | 0.817163 | 3.802181e-52 | -8.615850e-47 |
| Msa0773630 | Msa1211640 | 0.801182 | 1.015985e-48 | -8.615850e-47 |
| Msa0780910 | Msa1211640 | 0.836233 | 1.055181e-56 | -8.615850e-47 |
| Msa0805680 | Msa1211640 | 0.813216 | 2.864265e-51 | -8.615850e-47 |
| Msa0811020 | Msa1211640 | 0.808072 | 3.707136e-50 | -8.615850e-47 |
| Msa0816080 | Msa1211640 | 0.826130 | 3.212453e-54 | -8.615850e-47 |
| Msa0821160 | Msa1211640 | 0.834173 | 3.492002e-56 | -8.615850e-47 |
| Msa0828970 | Msa1211640 | 0.811087 | 8.344641e-51 | -8.615850e-47 |
| Msa0837460 | Msa1211640 | 0.825580 | 4.338067e-54 | -8.615850e-47 |
| Msa0840520 | Msa1211640 | 0.801003 | 1.105273e-48 | -8.615850e-47 |
| Msa0122330 | Msa1211640 | 0.829141 | 6.077241e-55 | -8.615850e-47 |
| Msa0123070 | Msa1211640 | 0.809268 | 2.057793e-50 | -8.615850e-47 |
| Msa0125360 | Msa1211640 | 0.808341 | 3.248389e-50 | -8.615850e-47 |
| Msa0125590 | Msa1211640 | 0.842846 | 2.015229e-58 | -8.615850e-47 |
| Msa0127340 | Msa1211640 | 0.825543 | 4.427618e-54 | -8.615850e-47 |
| Msa0140380 | Msa1211640 | 0.833917 | 4.048121e-56 | -8.615850e-47 |
| Msa0143670 | Msa1211640 | 0.895960 | 5.830146e-76 | -8.615850e-47 |
| Msa0155180 | Msa1211640 | 0.815782 | 7.749842e-52 | -8.615850e-47 |
| Msa0156050 | Msa1211640 | 0.807689 | 4.472104e-50 | -8.615850e-47 |
| Msa0156090 | Msa1211640 | 0.800376 | 1.483396e-48 | -8.615850e-47 |
| Msa0159590 | Msa1211640 | 0.823174 | 1.596683e-53 | -8.615850e-47 |
| Msa0159620 | Msa1211640 | 0.820038 | 8.470601e-53 | -8.615850e-47 |
| Msa0161930 | Msa1211640 | 0.822238 | 2.635822e-53 | -8.615850e-47 |
| Msa0165830 | Msa1211640 | 0.841382 | 4.916395e-58 | -8.615850e-47 |
| Msa0168050 | Msa1211640 | 0.826546 | 2.556408e-54 | -8.615850e-47 |
| Msa0170070 | Msa1211640 | 0.842892 | 1.959010e-58 | -8.615850e-47 |
| Msa0172510 | Msa1211640 | 0.805979 | 1.027473e-49 | -8.615850e-47 |
| Msa0186360 | Msa1211640 | 0.807660 | 4.535465e-50 | -8.615850e-47 |
| Msa0190730 | Msa1211640 | 0.836442 | 9.335316e-57 | -8.615850e-47 |
| Msa0194630 | Msa1211640 | 0.806027 | 1.004049e-49 | -8.615850e-47 |
| Msa0204950 | Msa1211640 | 0.821249 | 4.464822e-53 | -8.615850e-47 |
| Msa0230870 | Msa1211640 | 0.813668 | 2.277852e-51 | -8.615850e-47 |
| Msa0232760 | Msa1211640 | 0.822758 | 1.995655e-53 | -8.615850e-47 |
| Msa0233020 | Msa1211640 | 0.829395 | 5.272633e-55 | -8.615850e-47 |
| Msa0367150 | Msa1211640 | 0.832263 | 1.044308e-55 | -8.615850e-47 |
| Msa0367520 | Msa1211640 | 0.802679 | 5.004144e-49 | -8.615850e-47 |
| Msa0368860 | Msa1211640 | 0.823970 | 1.039587e-53 | -8.615850e-47 |
| Msa0373170 | Msa1211640 | 0.815051 | 1.126999e-51 | -8.615850e-47 |
| Msa0373500 | Msa1211640 | 0.831160 | 1.954254e-55 | -8.615850e-47 |
| Msa0373590 | Msa1211640 | 0.830205 | 3.348059e-55 | -8.615850e-47 |
| Msa0380490 | Msa1211640 | 0.828591 | 8.255935e-55 | -8.615850e-47 |
| Msa0383000 | Msa1211640 | 0.838820 | 2.290780e-57 | -8.615850e-47 |
| Msa0405620 | Msa1211640 | 0.800085 | 1.700789e-48 | -8.615850e-47 |
| Msa0409830 | Msa1211640 | 0.821584 | 3.735668e-53 | -8.615850e-47 |
| Msa0414880 | Msa1211640 | 0.801822 | 7.511454e-49 | -8.615850e-47 |
| Msa0416160 | Msa1211640 | 0.812363 | 4.401660e-51 | -8.615850e-47 |
| Msa0420430 | Msa1211640 | 0.803906 | 2.786841e-49 | -8.615850e-47 |
| Msa0421130 | Msa1211640 | 0.818046 | 2.403897e-52 | -8.615850e-47 |
| Msa0421750 | Msa1211640 | 0.821530 | 3.845749e-53 | -8.615850e-47 |
| Msa0430000 | Msa1211640 | 0.824202 | 9.172297e-54 | -8.615850e-47 |
| Msa0432010 | Msa1211640 | 0.854213 | 1.429919e-61 | -8.615850e-47 |
| Msa0433150 | Msa1211640 | 0.825019 | 5.887309e-54 | -8.615850e-47 |
| Msa0433760 | Msa1211640 | 0.867131 | 1.715439e-65 | -8.615850e-47 |
| Msa0436330 | Msa1211640 | 0.801907 | 7.213967e-49 | -8.615850e-47 |
| Msa0454560 | Msa1211640 | 0.827961 | 1.171307e-54 | -8.615850e-47 |
| Msa0459740 | Msa1211640 | 0.825710 | 4.041670e-54 | -8.615850e-47 |
| Msa0462780 | Msa1211640 | 0.826512 | 2.604939e-54 | -8.615850e-47 |
| Msa0466520 | Msa1211640 | 0.851814 | 6.943078e-61 | -8.615850e-47 |
| Msa0466880 | Msa1211640 | 0.826436 | 2.715405e-54 | -8.615850e-47 |
| Msa0467690 | Msa1211640 | 0.818180 | 2.242193e-52 | -8.615850e-47 |
| Msa0468620 | Msa1211640 | 0.826268 | 2.978548e-54 | -8.615850e-47 |
| Msa0477630 | Msa1211640 | 0.863030 | 3.328672e-64 | -8.615850e-47 |
| Msa0478140 | Msa1211640 | 0.810493 | 1.121436e-50 | -8.615850e-47 |
| Msa0480730 | Msa1211640 | 0.829653 | 4.564983e-55 | -8.615850e-47 |
| Msa0481890 | Msa1211640 | 0.869228 | 3.623079e-66 | -8.615850e-47 |
| Msa0989370 | Msa1211640 | 0.828529 | 8.546543e-55 | -8.615850e-47 |
| Msa1000780 | Msa1211640 | 0.808537 | 2.949906e-50 | -8.615850e-47 |
| Msa1002640 | Msa1211640 | 0.840209 | 9.978057e-58 | -8.615850e-47 |
| Msa1008670 | Msa1211640 | 0.831774 | 1.379228e-55 | -8.615850e-47 |
| Msa1033920 | Msa1211640 | 0.811806 | 5.822440e-51 | -8.615850e-47 |
| Msa1059020 | Msa1211640 | 0.818552 | 1.846654e-52 | -8.615850e-47 |
| Msa1074600 | Msa1211640 | 0.803204 | 3.897243e-49 | -8.615850e-47 |
| Msa1078990 | Msa1211640 | 0.816361 | 5.753345e-52 | -8.615850e-47 |
| Msa1082200 | Msa1211640 | 0.817404 | 3.356110e-52 | -8.615850e-47 |
| Msa1084530 | Msa1211640 | 0.864002 | 1.662445e-64 | -8.615850e-47 |
| Msa1104220 | Msa1211640 | 0.826403 | 2.764992e-54 | -8.615850e-47 |
| Msa1106220 | Msa1211640 | 0.805567 | 1.254078e-49 | -8.615850e-47 |
| Msa0249850 | Msa1211640 | 0.811569 | 6.558126e-51 | -8.615850e-47 |
| Msa0269210 | Msa1211640 | 0.818413 | 1.986140e-52 | -8.615850e-47 |
| Msa0272260 | Msa1211640 | 0.855103 | 7.894526e-62 | -8.615850e-47 |
| Msa0314870 | Msa1211640 | 0.815353 | 9.654557e-52 | -8.615850e-47 |
| Msa0320600 | Msa1211640 | 0.819804 | 9.579514e-53 | -8.615850e-47 |
| Msa0353950 | Msa1211640 | 0.803749 | 3.005258e-49 | -8.615850e-47 |
| Msa1125820 | Msa1211640 | 0.871495 | 6.543009e-67 | -8.615850e-47 |
| Msa1125990 | Msa1211640 | 0.868284 | 7.319905e-66 | -8.615850e-47 |
| Msa1127470 | Msa1211640 | 0.830526 | 2.795305e-55 | -8.615850e-47 |
| Msa1132530 | Msa1211640 | 0.810033 | 1.409738e-50 | -8.615850e-47 |
| Msa1148630 | Msa1211640 | 0.809976 | 1.449681e-50 | -8.615850e-47 |
| Msa1149450 | Msa1211640 | 0.802808 | 4.706579e-49 | -8.615850e-47 |
| Msa1159590 | Msa1211640 | 0.813406 | 2.600908e-51 | -8.615850e-47 |
| Msa1162230 | Msa1211640 | 0.812834 | 3.472933e-51 | -8.615850e-47 |
| Msa1162880 | Msa1211640 | 0.821004 | 5.082649e-53 | -8.615850e-47 |
| Msa1169690 | Msa1211640 | 0.804621 | 1.978674e-49 | -8.615850e-47 |
| Msa1171290 | Msa1211640 | 0.867080 | 1.781216e-65 | -8.615850e-47 |
| Msa1188790 | Msa1211640 | 0.844572 | 6.958107e-59 | -8.615850e-47 |
| Msa1192560 | Msa1211640 | 0.826356 | 2.837406e-54 | -8.615850e-47 |
| Msa1192590 | Msa1211640 | 0.822424 | 2.387085e-53 | -8.615850e-47 |
| Msa1194240 | Msa1211640 | 0.838582 | 2.639074e-57 | -8.615850e-47 |
| Msa1201780 | Msa1211640 | 0.810790 | 9.673833e-51 | -8.615850e-47 |
| Msa1211640 | Msa1213830 | 0.819660 | 1.033712e-52 | -8.615850e-47 |
| Msa1211640 | Msa1214350 | 0.831239 | 1.867932e-55 | -8.615850e-47 |
| Msa1211640 | Msa1215980 | 0.804362 | 2.240382e-49 | -8.615850e-47 |
| Msa1211640 | Msa1217230 | 0.837686 | 4.489414e-57 | -8.615850e-47 |
| Msa1211640 | Msa1218820 | 0.844672 | 6.540840e-59 | -8.615850e-47 |
| Msa1211640 | Msa1223390 | 0.812476 | 4.159562e-51 | -8.615850e-47 |
| Msa1211640 | Msa1228580 | 0.804395 | 2.205138e-49 | -8.615850e-47 |
| Msa1211640 | Msa1242960 | 0.832331 | 1.004942e-55 | -8.615850e-47 |
| Msa1211640 | Msa1254100 | 0.812214 | 4.743902e-51 | -8.615850e-47 |
| Msa1211640 | Msa1254540 | 0.851762 | 7.183035e-61 | -8.615850e-47 |
| Msa1211640 | Msa1261050 | 0.823648 | 1.236799e-53 | -8.615850e-47 |
| Msa1211640 | Msa1263740 | 0.848962 | 4.387686e-60 | -8.615850e-47 |
| Msa1211640 | Msa1263780 | 0.858924 | 5.898561e-63 | -8.615850e-47 |
| Msa1211640 | Msa1263900 | 0.803209 | 3.888874e-49 | -8.615850e-47 |
| Msa1211640 | Msa1267930 | 0.839082 | 1.959769e-57 | -8.615850e-47 |
| Msa1211640 | Msa1290380 | 0.819934 | 8.946807e-53 | -8.615850e-47 |
| Msa1211640 | Msa1290440 | 0.817651 | 2.952328e-52 | -8.615850e-47 |
| Msa1211640 | Msa1293610 | 0.814357 | 1.605374e-51 | -8.615850e-47 |
| Msa1211640 | Msa1294280 | 0.820317 | 7.312458e-53 | -8.615850e-47 |
| Msa1211640 | Msa1294460 | 0.849482 | 3.142609e-60 | -8.615850e-47 |
| Msa1211640 | Msa1294790 | 0.828093 | 1.088506e-54 | -8.615850e-47 |
| Msa1211640 | Msa1299500 | 0.861290 | 1.137940e-63 | -8.615850e-47 |
| Msa1211640 | Msa1300460 | 0.831242 | 1.865751e-55 | -8.615850e-47 |
| Msa1211640 | Msa1301820 | 0.800331 | 1.515020e-48 | -8.615850e-47 |
| Msa1211640 | Msa1305780 | 0.814398 | 1.572657e-51 | -8.615850e-47 |
| Msa1211640 | Msa1305920 | 0.839887 | 1.210878e-57 | -8.615850e-47 |
| Msa1211640 | Msa1306790 | 0.815121 | 1.087283e-51 | -8.615850e-47 |
| Msa1211640 | Msa1308850 | 0.817337 | 3.475593e-52 | -8.615850e-47 |
| Msa1211640 | Msa1327800 | 0.817477 | 3.232257e-52 | -8.615850e-47 |
| Msa1211640 | Msa1332950 | 0.861377 | 1.070584e-63 | -8.615850e-47 |
| Msa1211640 | Msa1338210 | 0.813651 | 2.297457e-51 | -8.615850e-47 |
| Msa1211640 | Msa1339170 | 0.802502 | 5.441268e-49 | -8.615850e-47 |
| Msa1211640 | Msa1339230 | 0.808405 | 3.148091e-50 | -8.615850e-47 |
| Msa1211640 | Msa1362130 | 0.833033 | 6.727133e-56 | -8.615850e-47 |
| Msa1211640 | Msa1364410 | 0.807706 | 4.433047e-50 | -8.615850e-47 |
| Msa1211640 | Msa1364680 | 0.824152 | 9.423538e-54 | -8.615850e-47 |
| Msa1211640 | Msa1365500 | 0.841345 | 5.026409e-58 | -8.615850e-47 |
| Msa1211640 | Msa1366150 | 0.821682 | 3.546822e-53 | -8.615850e-47 |
| Msa1211640 | Msa1367180 | 0.807490 | 4.928736e-50 | -8.615850e-47 |
| Msa1211640 | Msa1368750 | 0.853754 | 1.938301e-61 | -8.615850e-47 |
| Msa1211640 | Msa1374790 | 0.851092 | 1.111659e-60 | -8.615850e-47 |
| Msa1211640 | Msa1380120 | 0.819981 | 8.726675e-53 | -8.615850e-47 |
| Msa1211640 | Msa1381470 | 0.872292 | 3.558379e-67 | -8.615850e-47 |
| Msa1211640 | Msa1384150 | 0.839278 | 1.744075e-57 | -8.615850e-47 |
| Msa1211640 | Msa1387440 | 0.847779 | 9.316452e-60 | -8.615850e-47 |
| Msa1211640 | Msa1387500 | 0.844801 | 6.038071e-59 | -8.615850e-47 |
| Msa1211640 | Msa1399190 | 0.817568 | 3.083253e-52 | -8.615850e-47 |
| Msa1211640 | Msa1405460 | 0.800169 | 1.634673e-48 | -8.615850e-47 |
| Msa1211640 | Msa1406720 | 0.854677 | 1.049380e-61 | -8.615850e-47 |
| Msa1211640 | Msa1409410 | 0.835116 | 2.023768e-56 | -8.615850e-47 |
| Msa1211640 | Msa1426320 | 0.810097 | 1.365312e-50 | -8.615850e-47 |
| Msa1211640 | Msa1429070 | 0.825789 | 3.871098e-54 | -8.615850e-47 |
| Msa1211640 | Msa1432520 | 0.808499 | 3.005812e-50 | -8.615850e-47 |
| Msa1211640 | Msa1434640 | 0.802952 | 4.393745e-49 | -8.615850e-47 |
| Msa1211640 | Msa1436620 | 0.801521 | 8.658595e-49 | -8.615850e-47 |
| Msa1211640 | Msa1442260 | 0.809280 | 2.045942e-50 | -8.615850e-47 |
| Msa1211640 | Msa1445120 | 0.810334 | 1.213681e-50 | -8.615850e-47 |
| Msa1211640 | Msa1450190 | 0.830881 | 2.287692e-55 | -8.615850e-47 |
| Msa1211640 | Msa1451820 | 0.850808 | 1.336781e-60 | -8.615850e-47 |
| Msa1211640 | Msa1457840 | 0.828495 | 8.709381e-55 | -8.615850e-47 |
| Msa1211640 | Msa1459010 | 0.803403 | 3.545137e-49 | -8.615850e-47 |
| Msa1211640 | Msa1465360 | 0.819342 | 1.221296e-52 | -8.615850e-47 |
| Msa0500570 | Msa1211640 | 0.831259 | 1.847889e-55 | -8.615850e-47 |
| Msa0502510 | Msa1211640 | 0.838515 | 2.747385e-57 | -8.615850e-47 |
| Msa0513080 | Msa1211640 | 0.823680 | 1.215880e-53 | -8.615850e-47 |
| Msa0514020 | Msa1211640 | 0.828214 | 1.017865e-54 | -8.615850e-47 |
| Msa0514500 | Msa1211640 | 0.826322 | 2.891356e-54 | -8.615850e-47 |
| Msa0520870 | Msa1211640 | 0.845209 | 4.685281e-59 | -8.615850e-47 |
| Msa0521680 | Msa1211640 | 0.868836 | 4.853653e-66 | -8.615850e-47 |
| Msa0529030 | Msa1211640 | 0.801910 | 7.206020e-49 | -8.615850e-47 |
| Msa0531960 | Msa1211640 | 0.847076 | 1.453709e-59 | -8.615850e-47 |
| Msa0541740 | Msa1211640 | 0.836796 | 7.586418e-57 | -8.615850e-47 |
| Msa0554300 | Msa1211640 | 0.835441 | 1.675232e-56 | -8.615850e-47 |
| Msa0559100 | Msa1211640 | 0.811607 | 6.432366e-51 | -8.615850e-47 |
| Msa0563900 | Msa1211640 | 0.813488 | 2.496230e-51 | -8.615850e-47 |
| Msa0569530 | Msa1211640 | 0.802060 | 6.710999e-49 | -8.615850e-47 |
| Msa0577280 | Msa1211640 | 0.815346 | 9.691459e-52 | -8.615850e-47 |
| Msa0577330 | Msa1211640 | 0.816068 | 6.692107e-52 | -8.615850e-47 |
| Msa0577450 | Msa1211640 | 0.807715 | 4.414494e-50 | -8.615850e-47 |
| Msa0580810 | Msa1211640 | 0.901309 | 3.051889e-78 | -8.615850e-47 |
| Msa0586200 | Msa1211640 | 0.809472 | 1.860768e-50 | -8.615850e-47 |
| Msa0588920 | Msa1211640 | 0.824572 | 7.506564e-54 | -8.615850e-47 |
| Msa0590200 | Msa1211640 | 0.812205 | 4.767383e-51 | -8.615850e-47 |
| Msa0601960 | Msa1211640 | 0.800717 | 1.264467e-48 | -8.615850e-47 |
| Msa0851300 | Msa1211640 | 0.834535 | 2.834360e-56 | -8.615850e-47 |
| Msa0857890 | Msa1211640 | 0.807468 | 4.980205e-50 | -8.615850e-47 |
| Msa0861440 | Msa1211640 | 0.810588 | 1.069899e-50 | -8.615850e-47 |
| Msa0863620 | Msa1211640 | 0.811173 | 7.992488e-51 | -8.615850e-47 |
| Msa0865420 | Msa1211640 | 0.803945 | 2.736451e-49 | -8.615850e-47 |
| Msa0866530 | Msa1211640 | 0.816299 | 5.939360e-52 | -8.615850e-47 |
| Msa0867110 | Msa1211640 | 0.834496 | 2.897934e-56 | -8.615850e-47 |
| Msa0879920 | Msa1211640 | 0.858631 | 7.215279e-63 | -8.615850e-47 |
| Msa0888790 | Msa1211640 | 0.818269 | 2.141179e-52 | -8.615850e-47 |
| Msa0909760 | Msa1211640 | 0.823114 | 1.648907e-53 | -8.615850e-47 |
| Msa0924430 | Msa1211640 | 0.802352 | 5.843145e-49 | -8.615850e-47 |
| Msa0926310 | Msa1211640 | 0.817299 | 3.543951e-52 | -8.615850e-47 |
| Msa0931590 | Msa1211640 | 0.842969 | 1.868597e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211640 | MtrunA17_Chr4g0060361 | 93.878 | 392 | 24 | 0 | 1 | 392 | 1 | 392 | 0.0 | 712 |
| Msa1211640 | MtrunA17_Chr4g0029591 | 49.180 | 61 | 31 | 0 | 130 | 190 | 159 | 219 | 6.29e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211640 | AT5G62550.1 | 45.882 | 255 | 111 | 10 | 1 | 243 | 5 | 244 | 1.42e-43 | 158 |
Find 84 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCCTCTGTTGATGTTTC+TGG | 0.123160 | 8_1:-71349841 | Msa1211640:intron |
| TGCATCTGGCTTCTGTTCTT+TGG | 0.167408 | 8_1:+71349659 | None:intergenic |
| TACTTTATACTCTATATATT+TGG | 0.173245 | 8_1:-71347120 | Msa1211640:three_prime_UTR |
| TCAGCTCGTCTTGTAATTTC+TGG | 0.205275 | 8_1:+71348138 | None:intergenic |
| CTTGATCTTGTCTCAGAGAT+TGG | 0.260994 | 8_1:+71348671 | None:intergenic |
| AGTGGATATCTTTGAAGTTT+TGG | 0.266285 | 8_1:+71349699 | None:intergenic |
| TTTCTTGACCCCACTCTTAC+TGG | 0.268634 | 8_1:+71347623 | None:intergenic |
| GACGAACGAGTTTCCTCTTC+TGG | 0.269058 | 8_1:+71347987 | None:intergenic |
| AACCATAGATTCACCCAAAA+AGG | 0.296651 | 8_1:-71347784 | Msa1211640:CDS |
| TTGATCTTGTCTCAGAGATT+GGG | 0.302498 | 8_1:+71348672 | None:intergenic |
| ACAGGATTAGAGAGCCTTCT+TGG | 0.325025 | 8_1:+71348740 | None:intergenic |
| AAGAGTGGGGTCAAGAAATA+TGG | 0.334967 | 8_1:-71347618 | Msa1211640:CDS |
| GCAATTTCAAAATCTGCTTC+TGG | 0.340732 | 8_1:-71347702 | Msa1211640:CDS |
| AGAGACCGGCGTTCGGGTTC+TGG | 0.355366 | 8_1:+71348619 | None:intergenic |
| GGCGACTCTATGGCTTTAAC+AGG | 0.355728 | 8_1:+71347870 | None:intergenic |
| AATCTCAGAGACCGGCGTTC+GGG | 0.362228 | 8_1:+71348613 | None:intergenic |
| AAATTAGATTTCTTCTTGTA+TGG | 0.369789 | 8_1:-71347206 | Msa1211640:intron |
| AGCCATAGAGTCGCCCAAAA+AGG | 0.383256 | 8_1:-71347862 | Msa1211640:CDS |
| AAATCTCAGAGACCGGCGTT+CGG | 0.394436 | 8_1:+71348612 | None:intergenic |
| GTTATGTTGCCAACCGCCTT+TGG | 0.396563 | 8_1:+71348695 | None:intergenic |
| TGTCATTCTGAAACTTTGTT+TGG | 0.399717 | 8_1:-71347285 | Msa1211640:three_prime_UTR |
| AGAGAAACTAATTCCAAAGT+TGG | 0.410613 | 8_1:+71349905 | None:intergenic |
| TTACTGGTTTCAAGCTTGCT+TGG | 0.411854 | 8_1:+71347639 | None:intergenic |
| TCTTGTCTTCAGCTTCATAT+TGG | 0.418460 | 8_1:-71348559 | Msa1211640:CDS |
| CCAAGCTGTACTGAATGTTA+TGG | 0.419138 | 8_1:-71347158 | Msa1211640:intron |
| GGGTTCTGGTTTGAGGCTCT+TGG | 0.425515 | 8_1:+71348633 | None:intergenic |
| GAGACAAGATCAAGGAGGTC+TGG | 0.434478 | 8_1:-71348662 | Msa1211640:CDS |
| TGGATTCTTCAAACTAGCCT+TGG | 0.435742 | 8_1:-71348486 | Msa1211640:CDS |
| TTGCCAACCGCCTTTGGACT+CGG | 0.440988 | 8_1:+71348701 | None:intergenic |
| GTAGGTGCCCTTGATTTCTC+TGG | 0.448973 | 8_1:-71348791 | Msa1211640:CDS |
| GGCGTTCGGGTTCTGGTTTG+AGG | 0.450929 | 8_1:+71348626 | None:intergenic |
| TCAAAGATATCCACTGCGTT+CGG | 0.452607 | 8_1:-71349691 | Msa1211640:CDS |
| AGAGGCAGTGTTTAAGCACT+TGG | 0.461037 | 8_1:+71347908 | None:intergenic |
| TTCAAACTAGCCTTGGAGGC+AGG | 0.481991 | 8_1:-71348479 | Msa1211640:CDS |
| TGTCCTTGCCAGAGAAATCA+AGG | 0.493273 | 8_1:+71348783 | None:intergenic |
| CCATTCCTTCTCAATCTAAG+AGG | 0.494684 | 8_1:-71349626 | Msa1211640:intron |
| GAGGCAGTGTTTAAGCACTT+GGG | 0.497338 | 8_1:+71347909 | None:intergenic |
| AATTCTTCTACCATGGCTAC+TGG | 0.502673 | 8_1:-71347942 | Msa1211640:CDS |
| ATTCTTCAAACTAGCCTTGG+AGG | 0.505138 | 8_1:-71348483 | Msa1211640:CDS |
| CTGGTAGTTTGAACCGTGGT+AGG | 0.506721 | 8_1:-71347683 | Msa1211640:CDS |
| CTCGTCTTGTAATTTCTGGA+AGG | 0.512731 | 8_1:+71348142 | None:intergenic |
| TGATCTTGTCTCAGAGATTG+GGG | 0.514449 | 8_1:+71348673 | None:intergenic |
| AATCAAGGGCACCTACACTT+TGG | 0.520785 | 8_1:+71348798 | None:intergenic |
| TGCCCTTGATTTCTCTGGCA+AGG | 0.521077 | 8_1:-71348786 | Msa1211640:CDS |
| TACCTCACATCCTGCCTCCA+AGG | 0.524168 | 8_1:+71348469 | None:intergenic |
| CCTCTTAGATTGAGAAGGAA+TGG | 0.524717 | 8_1:+71349626 | None:intergenic |
| AGGAGAAGTGACTTGAATAG+AGG | 0.527192 | 8_1:+71347812 | None:intergenic |
| AGCTTGAAACCAGTAAGAGT+GGG | 0.529300 | 8_1:-71347632 | Msa1211640:CDS |
| CTTCAGCAATTCTTCTACCA+TGG | 0.534822 | 8_1:-71347949 | Msa1211640:CDS |
| TCGTCTTGTAATTTCTGGAA+GGG | 0.535594 | 8_1:+71348143 | None:intergenic |
| AGGAGAAATGACTTGAATAG+AGG | 0.536982 | 8_1:+71347890 | None:intergenic |
| GGAGTTGTAGATGATTTGAC+AGG | 0.537947 | 8_1:+71348722 | None:intergenic |
| ACCTACACTTTGGCTTACAT+TGG | 0.542241 | 8_1:+71348808 | None:intergenic |
| GAAAAGCACAACATTTCACT+TGG | 0.547280 | 8_1:-71348506 | Msa1211640:CDS |
| AGGCAGTGTTTAAGCACTTG+GGG | 0.559218 | 8_1:+71347910 | None:intergenic |
| TGGAGAACAAGTGAAAGTAC+TGG | 0.572339 | 8_1:-71348075 | Msa1211640:CDS |
| AAGCTTGAAACCAGTAAGAG+TGG | 0.576498 | 8_1:-71347633 | Msa1211640:CDS |
| GGATTAGAGAGCCTTCTTGG+TGG | 0.579620 | 8_1:+71348743 | None:intergenic |
| ACTCGTTCGTCTGATGATGA+AGG | 0.582042 | 8_1:-71347975 | Msa1211640:CDS |
| TTCAATCAAATCATCATCAG+TGG | 0.585107 | 8_1:+71347337 | None:intergenic |
| AGGAAAGCTGATGCTAAAGA+AGG | 0.586233 | 8_1:-71347594 | Msa1211640:intron |
| AAGTACCTCTTAGATTGAGA+AGG | 0.587502 | 8_1:+71349621 | None:intergenic |
| ATGGTGGTAACAGATGCATC+TGG | 0.588043 | 8_1:+71349645 | None:intergenic |
| CAATCTCTGAGACAAGATCA+AGG | 0.592779 | 8_1:-71348670 | Msa1211640:CDS |
| GATCTGAAAATCTCAGAGAC+CGG | 0.593480 | 8_1:+71348605 | None:intergenic |
| TATTTCACAGATGCCAGAAG+AGG | 0.595376 | 8_1:-71348000 | Msa1211640:CDS |
| GGTCAGTTTACCAGTAGCCA+TGG | 0.603404 | 8_1:+71347932 | None:intergenic |
| ACTCCGAGTCCAAAGGCGGT+TGG | 0.613714 | 8_1:-71348704 | Msa1211640:CDS |
| AGCCTTGGAGGCAGGATGTG+AGG | 0.616507 | 8_1:-71348471 | Msa1211640:intron |
| ATCTACAACTCCGAGTCCAA+AGG | 0.621399 | 8_1:-71348711 | Msa1211640:CDS |
| TGTGTATAATATTCTGTGTG+TGG | 0.624819 | 8_1:-71347261 | Msa1211640:three_prime_UTR |
| CAAGTGCTAAACCACCAAGA+AGG | 0.625854 | 8_1:-71348754 | Msa1211640:CDS |
| GTGGGGTCAAGAAATATGGA+AGG | 0.640207 | 8_1:-71347614 | Msa1211640:CDS |
| TCAAACCAGAACCCGAACGC+CGG | 0.647853 | 8_1:-71348624 | Msa1211640:CDS |
| GATCTAGAAGCCGAACGCAG+TGG | 0.649966 | 8_1:+71349681 | None:intergenic |
| CTTAGATTGAGAAGGAATGG+TGG | 0.657124 | 8_1:+71349629 | None:intergenic |
| GGCAGTGTTTAAGCACTTGG+GGG | 0.661328 | 8_1:+71347911 | None:intergenic |
| TACAACTCCGAGTCCAAAGG+CGG | 0.670021 | 8_1:-71348708 | Msa1211640:CDS |
| GTCCTTGCCAGAGAAATCAA+GGG | 0.679822 | 8_1:+71348784 | None:intergenic |
| GCCAATGTAAGCCAAAGTGT+AGG | 0.695393 | 8_1:-71348809 | Msa1211640:CDS |
| GCTTGAAACCAGTAAGAGTG+GGG | 0.703352 | 8_1:-71347631 | Msa1211640:CDS |
| ATTACCAGAAACATCAACAG+AGG | 0.707528 | 8_1:+71349837 | None:intergenic |
| GCTTCTGGTAGTTTGAACCG+TGG | 0.708584 | 8_1:-71347687 | Msa1211640:CDS |
| TCTCTGAGACAAGATCAAGG+AGG | 0.818846 | 8_1:-71348667 | Msa1211640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGTTTTGTTTGTAAAA+CGG | - | chr8_1:71347485-71347504 | Msa1211640:intron | 15.0% |
| !! | TACTTTATACTCTATATATT+TGG | - | chr8_1:71349915-71349934 | Msa1211640:five_prime_UTR | 15.0% |
| !!! | TATATTTGGTTTTATTATAG+TGG | - | chr8_1:71349929-71349948 | Msa1211640:five_prime_UTR | 15.0% |
| !!! | CGTTTGTTTGATTTTATAAA+GGG | + | chr8_1:71347068-71347087 | None:intergenic | 20.0% |
| !! | CAGAATCAATTAATTGAAAA+AGG | + | chr8_1:71347249-71347268 | None:intergenic | 20.0% |
| !! | GAAAGGAAAAAAAAAACAAT+TGG | + | chr8_1:71347294-71347313 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTTTTTTCCTTTC+AGG | - | chr8_1:71347294-71347313 | Msa1211640:three_prime_UTR | 20.0% |
| !!! | TTGTTTTTTTTTTCCTTTCA+GGG | - | chr8_1:71347295-71347314 | Msa1211640:three_prime_UTR | 20.0% |
| !! | TGAAGTTAATTTCAAAACAT+TGG | - | chr8_1:71347555-71347574 | Msa1211640:intron | 20.0% |
| !! | GAGTATAATGTAATTAATGT+TGG | + | chr8_1:71347605-71347624 | None:intergenic | 20.0% |
| !! | AATCTAAAAATAAGAGCTTT+AGG | - | chr8_1:71347819-71347838 | Msa1211640:CDS | 20.0% |
| !! | TTCATATATAACTAAGGTTA+TGG | + | chr8_1:71348099-71348118 | None:intergenic | 20.0% |
| !!! | TCAGTTTTCATATATAACTA+AGG | + | chr8_1:71348105-71348124 | None:intergenic | 20.0% |
| !!! | AATCTAATTTACATTTTCAG+AGG | - | chr8_1:71348193-71348212 | Msa1211640:intron | 20.0% |
| !! | ATGACAAAATTGAAATAAAC+AGG | + | chr8_1:71348615-71348634 | None:intergenic | 20.0% |
| !!! | AATTTTAAAACTTGCTAAGT+AGG | + | chr8_1:71348658-71348677 | None:intergenic | 20.0% |
| !!! | TATTGTGATTTTTGATATTG+TGG | - | chr8_1:71348685-71348704 | Msa1211640:CDS | 20.0% |
| !! | AAATTAGATTTCTTCTTGTA+TGG | - | chr8_1:71349829-71349848 | Msa1211640:intron | 20.0% |
| !!! | GCGTTTGTTTGATTTTATAA+AGG | + | chr8_1:71347069-71347088 | None:intergenic | 25.0% |
| ! | CACAAAAAAAAAACCAACTT+TGG | - | chr8_1:71347117-71347136 | Msa1211640:three_prime_UTR | 25.0% |
| ! | TGTTTATGTTGAAAATCGAA+GGG | + | chr8_1:71347632-71347651 | None:intergenic | 25.0% |
| ! | TTGTTTATGTTGAAAATCGA+AGG | + | chr8_1:71347633-71347652 | None:intergenic | 25.0% |
| ! | ATTCCTTAACATGTATCTTT+AGG | + | chr8_1:71347802-71347821 | None:intergenic | 25.0% |
| ! | ACCAACATGTATACATATAT+TGG | - | chr8_1:71347910-71347929 | Msa1211640:CDS | 25.0% |
| ! | GTTCACATTAAACAAACTAA+TGG | + | chr8_1:71347942-71347961 | None:intergenic | 25.0% |
| ! | TAAGTCTTACATAATGCAAA+TGG | + | chr8_1:71348063-71348082 | None:intergenic | 25.0% |
| !!! | AAACTGAGTGAATACTTTTT+AGG | - | chr8_1:71348118-71348137 | Msa1211640:CDS | 25.0% |
| !!! | AACTGAGTGAATACTTTTTA+GGG | - | chr8_1:71348119-71348138 | Msa1211640:CDS | 25.0% |
| ! | ATAAACAGGAATGAATTGAT+TGG | + | chr8_1:71348601-71348620 | None:intergenic | 25.0% |
| ! | TGCAATCAAAGTTTATCAAT+TGG | + | chr8_1:71348727-71348746 | None:intergenic | 25.0% |
| ! | AAATCACATTTATACATGAG+TGG | - | chr8_1:71348772-71348791 | Msa1211640:CDS | 25.0% |
| !!! | TAATCAAGTCGTCTTTTTTA+TGG | - | chr8_1:71348846-71348865 | Msa1211640:intron | 25.0% |
| !!! | TTTTGGCTAATTTCCTTTTT+GGG | + | chr8_1:71349189-71349208 | None:intergenic | 25.0% |
| ! | TGCTGAAGAAAAAGAAAATA+TGG | - | chr8_1:71349579-71349598 | Msa1211640:intron | 25.0% |
| ! | GAAAAAGAAAATATGGTAAG+TGG | - | chr8_1:71349586-71349605 | Msa1211640:intron | 25.0% |
| ! | AGAATATATGTCTGATATGT+TGG | - | chr8_1:71349652-71349671 | Msa1211640:CDS | 25.0% |
| ! | CTTCATTAACACCTATTAAA+TGG | + | chr8_1:71349856-71349875 | None:intergenic | 25.0% |
| AGAGAAACTAATTCCAAAGT+TGG | + | chr8_1:71347133-71347152 | None:intergenic | 30.0% | |
| !!! | AGTGGATATCTTTGAAGTTT+TGG | + | chr8_1:71347339-71347358 | None:intergenic | 30.0% |
| AACTGAAAATTCATGCAAGA+AGG | - | chr8_1:71347665-71347684 | Msa1211640:CDS | 30.0% | |
| TCATGCAAGAAGGATAATAT+TGG | - | chr8_1:71347675-71347694 | Msa1211640:CDS | 30.0% | |
| GCCAATATATGTATACATGT+TGG | + | chr8_1:71347914-71347933 | None:intergenic | 30.0% | |
| ACAAAGACTTATCGATCTTA+CGG | + | chr8_1:71348004-71348023 | None:intergenic | 30.0% | |
| TGTACTCTACTTCAATTCAA+GGG | + | chr8_1:71348163-71348182 | None:intergenic | 30.0% | |
| TTGTACTCTACTTCAATTCA+AGG | + | chr8_1:71348164-71348183 | None:intergenic | 30.0% | |
| ! | CAAGTTCAGTAAGTTTTTGT+TGG | + | chr8_1:71348942-71348961 | None:intergenic | 30.0% |
| CAACAAAAACTTACTGAACT+TGG | - | chr8_1:71348940-71348959 | Msa1211640:intron | 30.0% | |
| !! | CTTTTGGCTAATTTCCTTTT+TGG | + | chr8_1:71349190-71349209 | None:intergenic | 30.0% |
| !!! | TTTTGGCTAGTTTCCTTTTT+GGG | + | chr8_1:71349267-71349286 | None:intergenic | 30.0% |
| ACTAGCCAAAAGAAAAATCT+TGG | - | chr8_1:71349276-71349295 | Msa1211640:intron | 30.0% | |
| ! | TGGTTCCAAGATTTTTCTTT+TGG | + | chr8_1:71349284-71349303 | None:intergenic | 30.0% |
| ! | TTGTCTAAAATCTAATGCCT+TGG | - | chr8_1:71349507-71349526 | Msa1211640:intron | 30.0% |
| ! | TTTTCTTCAGCACTTGTAAT+AGG | + | chr8_1:71349571-71349590 | None:intergenic | 30.0% |
| !!! | ATATGTTGGTTTTGTCTTGT+AGG | - | chr8_1:71349666-71349685 | Msa1211640:CDS | 30.0% |
| TTCAATCAAATCATCATCAG+TGG | + | chr8_1:71349701-71349720 | None:intergenic | 30.0% | |
| !! | TGTCATTCTGAAACTTTGTT+TGG | - | chr8_1:71349750-71349769 | Msa1211640:intron | 30.0% |
| TGTGTATAATATTCTGTGTG+TGG | - | chr8_1:71349774-71349793 | Msa1211640:intron | 30.0% | |
| TCTTGTATGGTCCATTTAAT+AGG | - | chr8_1:71349842-71349861 | Msa1211640:CDS | 30.0% | |
| AAGAACCAAACCAAAAACGA+TGG | - | chr8_1:71347163-71347182 | Msa1211640:intron | 35.0% | |
| ATTACCAGAAACATCAACAG+AGG | + | chr8_1:71347201-71347220 | None:intergenic | 35.0% | |
| AAGTACCTCTTAGATTGAGA+AGG | + | chr8_1:71347417-71347436 | None:intergenic | 35.0% | |
| ACTCAGATTGTTTGAATTCG+TGG | - | chr8_1:71347518-71347537 | Msa1211640:intron | 35.0% | |
| CTCAGATTGTTTGAATTCGT+GGG | - | chr8_1:71347519-71347538 | Msa1211640:intron | 35.0% | |
| TCAGATTGTTTGAATTCGTG+GGG | - | chr8_1:71347520-71347539 | Msa1211640:intron | 35.0% | |
| GTGCCTAAAGATACATGTTA+AGG | - | chr8_1:71347796-71347815 | Msa1211640:CDS | 35.0% | |
| TTGATCTTGTCTCAGAGATT+GGG | + | chr8_1:71348366-71348385 | None:intergenic | 35.0% | |
| TCTTGTCTTCAGCTTCATAT+TGG | - | chr8_1:71348476-71348495 | Msa1211640:CDS | 35.0% | |
| ! | CATTTTCAGAGAGCTTGATT+TGG | + | chr8_1:71348507-71348526 | None:intergenic | 35.0% |
| ! | GAAAAGCACAACATTTCACT+TGG | - | chr8_1:71348529-71348548 | Msa1211640:CDS | 35.0% |
| ! | AGACGACTTGATTAGTTCAT+GGG | + | chr8_1:71348840-71348859 | None:intergenic | 35.0% |
| ! | AAGACGACTTGATTAGTTCA+TGG | + | chr8_1:71348841-71348860 | None:intergenic | 35.0% |
| ! | TCGTCTTGTAATTTCTGGAA+GGG | + | chr8_1:71348895-71348914 | None:intergenic | 35.0% |
| ! | CAGTAAGTTTTTGTTGGTGT+CGG | + | chr8_1:71348936-71348955 | None:intergenic | 35.0% |
| AGGAGAAATGACTTGAATAG+AGG | + | chr8_1:71349148-71349167 | None:intergenic | 35.0% | |
| ! | AGGCAGTGAGATTTTTCTTT+TGG | + | chr8_1:71349206-71349225 | None:intergenic | 35.0% |
| !!! | GGTGAATCTATGGTTTTAAC+AGG | + | chr8_1:71349246-71349265 | None:intergenic | 35.0% |
| AACCATAGATTCACCCAAAA+AGG | - | chr8_1:71349251-71349270 | Msa1211640:intron | 35.0% | |
| !!! | TTCCTTTTTGGGTGAATCTA+TGG | + | chr8_1:71349256-71349275 | None:intergenic | 35.0% |
| !!! | CTTTTGGCTAGTTTCCTTTT+TGG | + | chr8_1:71349268-71349287 | None:intergenic | 35.0% |
| !! | TCTGAGATTTTCTCTCAACT+TGG | + | chr8_1:71349304-71349323 | None:intergenic | 35.0% |
| GCAATTTCAAAATCTGCTTC+TGG | - | chr8_1:71349333-71349352 | Msa1211640:intron | 35.0% | |
| !! | ACTTTTTAACTGACCTACCA+CGG | + | chr8_1:71349368-71349387 | None:intergenic | 35.0% |
| AGCAAAAAGTAACAACACCA+AGG | + | chr8_1:71349527-71349546 | None:intergenic | 35.0% | |
| ! | GTTTTGTCTTGTAGGATGTT+CGG | - | chr8_1:71349674-71349693 | Msa1211640:CDS | 35.0% |
| !! | GGAGTTTGCTTGATCTTTTT+AGG | - | chr8_1:71349795-71349814 | Msa1211640:intron | 35.0% |
| !!! | GGTTTTATTATAGTGGTCTG+TGG | - | chr8_1:71349936-71349955 | Msa1211640:five_prime_UTR | 35.0% |
| !!! | CTCTTCCATCGTTTTTGGTT+TGG | + | chr8_1:71347171-71347190 | None:intergenic | 40.0% |
| ! | TGTTGCTCTTCCATCGTTTT+TGG | + | chr8_1:71347176-71347195 | None:intergenic | 40.0% |
| CAATCCTCTGTTGATGTTTC+TGG | - | chr8_1:71347194-71347213 | Msa1211640:intron | 40.0% | |
| TCAAAGATATCCACTGCGTT+CGG | - | chr8_1:71347344-71347363 | Msa1211640:CDS | 40.0% | |
| CTTAGATTGAGAAGGAATGG+TGG | + | chr8_1:71347409-71347428 | None:intergenic | 40.0% | |
| CCTCTTAGATTGAGAAGGAA+TGG | + | chr8_1:71347412-71347431 | None:intergenic | 40.0% | |
| CCATTCCTTCTCAATCTAAG+AGG | - | chr8_1:71347409-71347428 | Msa1211640:intron | 40.0% | |
| ! | ACCTACACTTTGGCTTACAT+TGG | + | chr8_1:71348230-71348249 | None:intergenic | 40.0% |
| GGAGTTGTAGATGATTTGAC+AGG | + | chr8_1:71348316-71348335 | None:intergenic | 40.0% | |
| TGATCTTGTCTCAGAGATTG+GGG | + | chr8_1:71348365-71348384 | None:intergenic | 40.0% | |
| CTTGATCTTGTCTCAGAGAT+TGG | + | chr8_1:71348367-71348386 | None:intergenic | 40.0% | |
| !! | CAATCTCTGAGACAAGATCA+AGG | - | chr8_1:71348365-71348384 | Msa1211640:intron | 40.0% |
| GATCTGAAAATCTCAGAGAC+CGG | + | chr8_1:71348433-71348452 | None:intergenic | 40.0% | |
| ! | TGGATTCTTCAAACTAGCCT+TGG | - | chr8_1:71348549-71348568 | Msa1211640:CDS | 40.0% |
| !! | ATTCTTCAAACTAGCCTTGG+AGG | - | chr8_1:71348552-71348571 | Msa1211640:CDS | 40.0% |
| TGCAATCGCATCATGATCTT+TGG | - | chr8_1:71348743-71348762 | Msa1211640:CDS | 40.0% | |
| ! | CTCGTCTTGTAATTTCTGGA+AGG | + | chr8_1:71348896-71348915 | None:intergenic | 40.0% |
| TCAGCTCGTCTTGTAATTTC+TGG | + | chr8_1:71348900-71348919 | None:intergenic | 40.0% | |
| ! | TGGAGAACAAGTGAAAGTAC+TGG | - | chr8_1:71348960-71348979 | Msa1211640:intron | 40.0% |
| TATTTCACAGATGCCAGAAG+AGG | - | chr8_1:71349035-71349054 | Msa1211640:intron | 40.0% | |
| CTTCAGCAATTCTTCTACCA+TGG | - | chr8_1:71349086-71349105 | Msa1211640:intron | 40.0% | |
| AATTCTTCTACCATGGCTAC+TGG | - | chr8_1:71349093-71349112 | Msa1211640:intron | 40.0% | |
| AGGAGAAGTGACTTGAATAG+AGG | + | chr8_1:71349226-71349245 | None:intergenic | 40.0% | |
| !! | TTACTGGTTTCAAGCTTGCT+TGG | + | chr8_1:71349399-71349418 | None:intergenic | 40.0% |
| AAGCTTGAAACCAGTAAGAG+TGG | - | chr8_1:71349402-71349421 | Msa1211640:intron | 40.0% | |
| AGCTTGAAACCAGTAAGAGT+GGG | - | chr8_1:71349403-71349422 | Msa1211640:intron | 40.0% | |
| AAGAGTGGGGTCAAGAAATA+TGG | - | chr8_1:71349417-71349436 | Msa1211640:intron | 40.0% | |
| AGGAAAGCTGATGCTAAAGA+AGG | - | chr8_1:71349441-71349460 | Msa1211640:intron | 40.0% | |
| CCATAACATTCAGTACAGCT+TGG | + | chr8_1:71349880-71349899 | None:intergenic | 40.0% | |
| CCAAGCTGTACTGAATGTTA+TGG | - | chr8_1:71349877-71349896 | Msa1211640:five_prime_UTR | 40.0% | |
| ! | TGCATCTGGCTTCTGTTCTT+TGG | + | chr8_1:71347379-71347398 | None:intergenic | 45.0% |
| ATGGTGGTAACAGATGCATC+TGG | + | chr8_1:71347393-71347412 | None:intergenic | 45.0% | |
| GCCAATGTAAGCCAAAGTGT+AGG | - | chr8_1:71348226-71348245 | Msa1211640:intron | 45.0% | |
| !! | AATCAAGGGCACCTACACTT+TGG | + | chr8_1:71348240-71348259 | None:intergenic | 45.0% |
| GTCCTTGCCAGAGAAATCAA+GGG | + | chr8_1:71348254-71348273 | None:intergenic | 45.0% | |
| TGTCCTTGCCAGAGAAATCA+AGG | + | chr8_1:71348255-71348274 | None:intergenic | 45.0% | |
| CAAGTGCTAAACCACCAAGA+AGG | - | chr8_1:71348281-71348300 | Msa1211640:intron | 45.0% | |
| ACAGGATTAGAGAGCCTTCT+TGG | + | chr8_1:71348298-71348317 | None:intergenic | 45.0% | |
| ATCTACAACTCCGAGTCCAA+AGG | - | chr8_1:71348324-71348343 | Msa1211640:intron | 45.0% | |
| !! | TCTCTGAGACAAGATCAAGG+AGG | - | chr8_1:71348368-71348387 | Msa1211640:intron | 45.0% |
| ! | ACTCGTTCGTCTGATGATGA+AGG | - | chr8_1:71349060-71349079 | Msa1211640:intron | 45.0% |
| AGGCAGTGTTTAAGCACTTG+GGG | + | chr8_1:71349128-71349147 | None:intergenic | 45.0% | |
| GAGGCAGTGTTTAAGCACTT+GGG | + | chr8_1:71349129-71349148 | None:intergenic | 45.0% | |
| AGAGGCAGTGTTTAAGCACT+TGG | + | chr8_1:71349130-71349149 | None:intergenic | 45.0% | |
| !! | TTCCTTTTTGGGCGACTCTA+TGG | + | chr8_1:71349178-71349197 | None:intergenic | 45.0% |
| GCTTGAAACCAGTAAGAGTG+GGG | - | chr8_1:71349404-71349423 | Msa1211640:intron | 45.0% | |
| TTTCTTGACCCCACTCTTAC+TGG | + | chr8_1:71349415-71349434 | None:intergenic | 45.0% | |
| GTGGGGTCAAGAAATATGGA+AGG | - | chr8_1:71349421-71349440 | Msa1211640:intron | 45.0% | |
| CAGAAGCAGAGTTCCCTGAA+AGG | + | chr8_1:71347311-71347330 | None:intergenic | 50.0% | |
| GTAGGTGCCCTTGATTTCTC+TGG | - | chr8_1:71348244-71348263 | Msa1211640:intron | 50.0% | |
| TGCCCTTGATTTCTCTGGCA+AGG | - | chr8_1:71348249-71348268 | Msa1211640:intron | 50.0% | |
| GGATTAGAGAGCCTTCTTGG+TGG | + | chr8_1:71348295-71348314 | None:intergenic | 50.0% | |
| TACAACTCCGAGTCCAAAGG+CGG | - | chr8_1:71348327-71348346 | Msa1211640:intron | 50.0% | |
| GTTATGTTGCCAACCGCCTT+TGG | + | chr8_1:71348343-71348362 | None:intergenic | 50.0% | |
| GAGACAAGATCAAGGAGGTC+TGG | - | chr8_1:71348373-71348392 | Msa1211640:intron | 50.0% | |
| AAATCTCAGAGACCGGCGTT+CGG | + | chr8_1:71348426-71348445 | None:intergenic | 50.0% | |
| !! | TTCAAACTAGCCTTGGAGGC+AGG | - | chr8_1:71348556-71348575 | Msa1211640:CDS | 50.0% |
| GACGAACGAGTTTCCTCTTC+TGG | + | chr8_1:71349051-71349070 | None:intergenic | 50.0% | |
| GGTCAGTTTACCAGTAGCCA+TGG | + | chr8_1:71349106-71349125 | None:intergenic | 50.0% | |
| GGCAGTGTTTAAGCACTTGG+GGG | + | chr8_1:71349127-71349146 | None:intergenic | 50.0% | |
| !! | GGCGACTCTATGGCTTTAAC+AGG | + | chr8_1:71349168-71349187 | None:intergenic | 50.0% |
| AGCCATAGAGTCGCCCAAAA+AGG | - | chr8_1:71349173-71349192 | Msa1211640:intron | 50.0% | |
| GCTTCTGGTAGTTTGAACCG+TGG | - | chr8_1:71349348-71349367 | Msa1211640:intron | 50.0% | |
| CTGGTAGTTTGAACCGTGGT+AGG | - | chr8_1:71349352-71349371 | Msa1211640:intron | 50.0% | |
| GATCTAGAAGCCGAACGCAG+TGG | + | chr8_1:71347357-71347376 | None:intergenic | 55.0% | |
| TTGCCAACCGCCTTTGGACT+CGG | + | chr8_1:71348337-71348356 | None:intergenic | 55.0% | |
| !! | GGGTTCTGGTTTGAGGCTCT+TGG | + | chr8_1:71348405-71348424 | None:intergenic | 55.0% |
| TCAAACCAGAACCCGAACGC+CGG | - | chr8_1:71348411-71348430 | Msa1211640:intron | 55.0% | |
| AATCTCAGAGACCGGCGTTC+GGG | + | chr8_1:71348425-71348444 | None:intergenic | 55.0% | |
| TACCTCACATCCTGCCTCCA+AGG | + | chr8_1:71348569-71348588 | None:intergenic | 55.0% | |
| TACATGAGTGGCCTCAACCG+TGG | - | chr8_1:71348784-71348803 | Msa1211640:CDS | 55.0% | |
| TGTAGTCTAGCCCGCAACCA+CGG | + | chr8_1:71348804-71348823 | None:intergenic | 55.0% | |
| ACTCCGAGTCCAAAGGCGGT+TGG | - | chr8_1:71348331-71348350 | Msa1211640:intron | 60.0% | |
| !! | GGCGTTCGGGTTCTGGTTTG+AGG | + | chr8_1:71348412-71348431 | None:intergenic | 60.0% |
| AGCCTTGGAGGCAGGATGTG+AGG | - | chr8_1:71348564-71348583 | Msa1211640:CDS | 60.0% | |
| AGTGGCCTCAACCGTGGTTG+CGG | - | chr8_1:71348790-71348809 | Msa1211640:CDS | 60.0% | |
| ! | AGAGACCGGCGTTCGGGTTC+TGG | + | chr8_1:71348419-71348438 | None:intergenic | 65.0% |
| GTGGCCTCAACCGTGGTTGC+GGG | - | chr8_1:71348791-71348810 | Msa1211640:CDS | 65.0% | |
| CTAGCCCGCAACCACGGTTG+AGG | + | chr8_1:71348798-71348817 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 71347057 | 71350000 | 71347057 | ID=Msa1211640;Name=Msa1211640 |
| chr8_1 | mRNA | 71347057 | 71350000 | 71347057 | ID=Msa1211640-mRNA-1;Parent=Msa1211640;Name=Msa1211640-mRNA-1;_AED=0.11;_eAED=0.11;_QI=125|1|1|1|0.83|0.71|7|232|392 |
| chr8_1 | exon | 71347057 | 71347167 | 71347057 | ID=Msa1211640-mRNA-1:exon:23961;Parent=Msa1211640-mRNA-1 |
| chr8_1 | exon | 71347207 | 71347369 | 71347207 | ID=Msa1211640-mRNA-1:exon:23960;Parent=Msa1211640-mRNA-1 |
| chr8_1 | exon | 71347457 | 71347500 | 71347457 | ID=Msa1211640-mRNA-1:exon:23959;Parent=Msa1211640-mRNA-1 |
| chr8_1 | exon | 71347595 | 71348165 | 71347595 | ID=Msa1211640-mRNA-1:exon:23958;Parent=Msa1211640-mRNA-1 |
| chr8_1 | exon | 71348472 | 71348844 | 71348472 | ID=Msa1211640-mRNA-1:exon:23957;Parent=Msa1211640-mRNA-1 |
| chr8_1 | exon | 71349627 | 71349741 | 71349627 | ID=Msa1211640-mRNA-1:exon:23956;Parent=Msa1211640-mRNA-1 |
| chr8_1 | exon | 71349842 | 71350000 | 71349842 | ID=Msa1211640-mRNA-1:exon:23955;Parent=Msa1211640-mRNA-1 |
| chr8_1 | five_prime_UTR | 71349876 | 71350000 | 71349876 | ID=Msa1211640-mRNA-1:five_prime_utr;Parent=Msa1211640-mRNA-1 |
| chr8_1 | CDS | 71349842 | 71349875 | 71349842 | ID=Msa1211640-mRNA-1:cds;Parent=Msa1211640-mRNA-1 |
| chr8_1 | CDS | 71349627 | 71349741 | 71349627 | ID=Msa1211640-mRNA-1:cds;Parent=Msa1211640-mRNA-1 |
| chr8_1 | CDS | 71348472 | 71348844 | 71348472 | ID=Msa1211640-mRNA-1:cds;Parent=Msa1211640-mRNA-1 |
| chr8_1 | CDS | 71347595 | 71348165 | 71347595 | ID=Msa1211640-mRNA-1:cds;Parent=Msa1211640-mRNA-1 |
| chr8_1 | CDS | 71347457 | 71347500 | 71347457 | ID=Msa1211640-mRNA-1:cds;Parent=Msa1211640-mRNA-1 |
| chr8_1 | CDS | 71347328 | 71347369 | 71347328 | ID=Msa1211640-mRNA-1:cds;Parent=Msa1211640-mRNA-1 |
| chr8_1 | three_prime_UTR | 71347207 | 71347327 | 71347207 | ID=Msa1211640-mRNA-1:three_prime_utr;Parent=Msa1211640-mRNA-1 |
| chr8_1 | three_prime_UTR | 71347057 | 71347167 | 71347057 | ID=Msa1211640-mRNA-1:three_prime_utr;Parent=Msa1211640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
