Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598860 | XP_013455584.1 | 97.403 | 154 | 4 | 0 | 1 | 154 | 1 | 154 | 4.01e-107 | 312 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598860 | sp|O05517|RIMI_BACSU | 29.600 | 125 | 87 | 1 | 17 | 141 | 15 | 138 | 1.62e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598860 | G7ZX36 | 97.403 | 154 | 4 | 0 | 1 | 154 | 1 | 154 | 1.91e-107 | 312 |
Gene ID | Type | Classification |
---|---|---|
Msa0598860 | TR | GNAT |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0598860 | 0.812081 | 5.073562e-51 | -8.615850e-47 |
Msa0006070 | Msa0598860 | 0.840650 | 7.650532e-58 | -8.615850e-47 |
Msa0011960 | Msa0598860 | 0.832337 | 1.001325e-55 | -8.615850e-47 |
Msa0012040 | Msa0598860 | 0.806267 | 8.935986e-50 | -8.615850e-47 |
Msa0017510 | Msa0598860 | 0.813056 | 3.105391e-51 | -8.615850e-47 |
Msa0021510 | Msa0598860 | 0.808296 | 3.321243e-50 | -8.615850e-47 |
Msa0028660 | Msa0598860 | 0.812197 | 4.786154e-51 | -8.615850e-47 |
Msa0032090 | Msa0598860 | 0.811932 | 5.465463e-51 | -8.615850e-47 |
Msa0032430 | Msa0598860 | 0.803299 | 3.724238e-49 | -8.615850e-47 |
Msa0032580 | Msa0598860 | 0.826119 | 3.230867e-54 | -8.615850e-47 |
Msa0037700 | Msa0598860 | 0.807443 | 5.042610e-50 | -8.615850e-47 |
Msa0054480 | Msa0598860 | 0.837463 | 5.120574e-57 | -8.615850e-47 |
Msa0058300 | Msa0598860 | 0.813469 | 2.520097e-51 | -8.615850e-47 |
Msa0061080 | Msa0598860 | 0.830152 | 3.448523e-55 | -8.615850e-47 |
Msa0067990 | Msa0598860 | 0.807383 | 5.193320e-50 | -8.615850e-47 |
Msa0078900 | Msa0598860 | 0.806255 | 8.988365e-50 | -8.615850e-47 |
Msa0079380 | Msa0598860 | 0.806436 | 8.234065e-50 | -8.615850e-47 |
Msa0080200 | Msa0598860 | 0.801202 | 1.006543e-48 | -8.615850e-47 |
Msa0090360 | Msa0598860 | 0.804608 | 1.991275e-49 | -8.615850e-47 |
Msa0091210 | Msa0598860 | -0.804577 | 2.020532e-49 | -8.615850e-47 |
Msa0099220 | Msa0598860 | 0.810569 | 1.079804e-50 | -8.615850e-47 |
Msa0105620 | Msa0598860 | 0.840107 | 1.060903e-57 | -8.615850e-47 |
Msa0115270 | Msa0598860 | 0.810087 | 1.372123e-50 | -8.615850e-47 |
Msa0119850 | Msa0598860 | 0.802536 | 5.356311e-49 | -8.615850e-47 |
Msa0126610 | Msa0598860 | 0.800381 | 1.480049e-48 | -8.615850e-47 |
Msa0127050 | Msa0598860 | 0.817228 | 3.677445e-52 | -8.615850e-47 |
Msa0133130 | Msa0598860 | 0.803805 | 2.925451e-49 | -8.615850e-47 |
Msa0135380 | Msa0598860 | 0.802910 | 4.482635e-49 | -8.615850e-47 |
Msa0136070 | Msa0598860 | 0.841713 | 4.021944e-58 | -8.615850e-47 |
Msa0136100 | Msa0598860 | 0.807573 | 4.731969e-50 | -8.615850e-47 |
Msa0145440 | Msa0598860 | 0.828203 | 1.024487e-54 | -8.615850e-47 |
Msa0150820 | Msa0598860 | 0.831578 | 1.542168e-55 | -8.615850e-47 |
Msa0157290 | Msa0598860 | 0.812875 | 3.401819e-51 | -8.615850e-47 |
Msa0159340 | Msa0598860 | 0.811912 | 5.520589e-51 | -8.615850e-47 |
Msa0160550 | Msa0598860 | 0.861629 | 8.969232e-64 | -8.615850e-47 |
Msa0165220 | Msa0598860 | 0.806670 | 7.350050e-50 | -8.615850e-47 |
Msa0165660 | Msa0598860 | 0.820065 | 8.351887e-53 | -8.615850e-47 |
Msa0168230 | Msa0598860 | 0.805427 | 1.341702e-49 | -8.615850e-47 |
Msa0169310 | Msa0598860 | 0.811306 | 7.478046e-51 | -8.615850e-47 |
Msa0171540 | Msa0598860 | 0.827551 | 1.469950e-54 | -8.615850e-47 |
Msa0172070 | Msa0598860 | 0.802774 | 4.783263e-49 | -8.615850e-47 |
Msa0172970 | Msa0598860 | 0.823967 | 1.041173e-53 | -8.615850e-47 |
Msa0187120 | Msa0598860 | 0.828360 | 9.389174e-55 | -8.615850e-47 |
Msa0197660 | Msa0598860 | 0.802864 | 4.582681e-49 | -8.615850e-47 |
Msa0220720 | Msa0598860 | 0.822831 | 1.919030e-53 | -8.615850e-47 |
Msa0222890 | Msa0598860 | 0.818152 | 2.275426e-52 | -8.615850e-47 |
Msa0223690 | Msa0598860 | 0.803816 | 2.909562e-49 | -8.615850e-47 |
Msa0228070 | Msa0598860 | 0.811655 | 6.279890e-51 | -8.615850e-47 |
Msa0229380 | Msa0598860 | 0.814312 | 1.642703e-51 | -8.615850e-47 |
Msa0372340 | Msa0598860 | 0.830006 | 3.745033e-55 | -8.615850e-47 |
Msa0383800 | Msa0598860 | 0.808808 | 2.581699e-50 | -8.615850e-47 |
Msa0388050 | Msa0598860 | 0.800280 | 1.552150e-48 | -8.615850e-47 |
Msa0397750 | Msa0598860 | 0.809334 | 1.991787e-50 | -8.615850e-47 |
Msa0398710 | Msa0598860 | 0.808776 | 2.623244e-50 | -8.615850e-47 |
Msa0402650 | Msa0598860 | 0.806360 | 8.541775e-50 | -8.615850e-47 |
Msa0402790 | Msa0598860 | 0.817834 | 2.685082e-52 | -8.615850e-47 |
Msa0416650 | Msa0598860 | 0.806594 | 7.625198e-50 | -8.615850e-47 |
Msa0417270 | Msa0598860 | 0.810063 | 1.388322e-50 | -8.615850e-47 |
Msa0433640 | Msa0598860 | 0.816845 | 4.481626e-52 | -8.615850e-47 |
Msa0440400 | Msa0598860 | 0.805259 | 1.455241e-49 | -8.615850e-47 |
Msa0479660 | Msa0598860 | 0.809812 | 1.572906e-50 | -8.615850e-47 |
Msa0481530 | Msa0598860 | 0.822362 | 2.467557e-53 | -8.615850e-47 |
Msa0239800 | Msa0598860 | 0.804282 | 2.327541e-49 | -8.615850e-47 |
Msa0241620 | Msa0598860 | 0.807824 | 4.185132e-50 | -8.615850e-47 |
Msa0260680 | Msa0598860 | 0.812432 | 4.252889e-51 | -8.615850e-47 |
Msa0267370 | Msa0598860 | 0.801234 | 9.912558e-49 | -8.615850e-47 |
Msa0279220 | Msa0598860 | 0.811677 | 6.211416e-51 | -8.615850e-47 |
Msa0279700 | Msa0598860 | 0.830960 | 2.187723e-55 | -8.615850e-47 |
Msa0279790 | Msa0598860 | 0.812462 | 4.189661e-51 | -8.615850e-47 |
Msa0280090 | Msa0598860 | 0.809291 | 2.034179e-50 | -8.615850e-47 |
Msa0288100 | Msa0598860 | 0.805708 | 1.171506e-49 | -8.615850e-47 |
Msa0298700 | Msa0598860 | 0.805720 | 1.165086e-49 | -8.615850e-47 |
Msa0299870 | Msa0598860 | 0.832810 | 7.643659e-56 | -8.615850e-47 |
Msa0309750 | Msa0598860 | 0.815370 | 9.574164e-52 | -8.615850e-47 |
Msa0309770 | Msa0598860 | 0.843696 | 1.195463e-58 | -8.615850e-47 |
Msa0317510 | Msa0598860 | 0.807519 | 4.858174e-50 | -8.615850e-47 |
Msa0318980 | Msa0598860 | 0.817417 | 3.334519e-52 | -8.615850e-47 |
Msa0333030 | Msa0598860 | 0.804607 | 1.991621e-49 | -8.615850e-47 |
Msa0336420 | Msa0598860 | 0.806563 | 7.742301e-50 | -8.615850e-47 |
Msa0337240 | Msa0598860 | 0.816244 | 6.109821e-52 | -8.615850e-47 |
Msa0337620 | Msa0598860 | 0.818901 | 1.539022e-52 | -8.615850e-47 |
Msa0340450 | Msa0598860 | 0.801212 | 1.001812e-48 | -8.615850e-47 |
Msa0350990 | Msa0598860 | 0.801065 | 1.073216e-48 | -8.615850e-47 |
Msa0358170 | Msa0598860 | 0.801034 | 1.089099e-48 | -8.615850e-47 |
Msa0483850 | Msa0598860 | 0.804747 | 1.861989e-49 | -8.615850e-47 |
Msa0487800 | Msa0598860 | 0.804436 | 2.162736e-49 | -8.615850e-47 |
Msa0493410 | Msa0598860 | 0.805036 | 1.620018e-49 | -8.615850e-47 |
Msa0500360 | Msa0598860 | 0.800664 | 1.295870e-48 | -8.615850e-47 |
Msa0509390 | Msa0598860 | 0.803858 | 2.852335e-49 | -8.615850e-47 |
Msa0512750 | Msa0598860 | 0.817316 | 3.513218e-52 | -8.615850e-47 |
Msa0515010 | Msa0598860 | 0.809376 | 1.950630e-50 | -8.615850e-47 |
Msa0521500 | Msa0598860 | 0.800398 | 1.468435e-48 | -8.615850e-47 |
Msa0529890 | Msa0598860 | 0.819713 | 1.005086e-52 | -8.615850e-47 |
Msa0530260 | Msa0598860 | 0.819440 | 1.160073e-52 | -8.615850e-47 |
Msa0542750 | Msa0598860 | 0.942261 | 9.830247e-102 | -8.615850e-47 |
Msa0555450 | Msa0598860 | 0.807968 | 3.900826e-50 | -8.615850e-47 |
Msa0580420 | Msa0598860 | 0.800768 | 1.234121e-48 | -8.615850e-47 |
Msa0584860 | Msa0598860 | 0.808178 | 3.518114e-50 | -8.615850e-47 |
Msa0585560 | Msa0598860 | 0.826705 | 2.343076e-54 | -8.615850e-47 |
Msa0592440 | Msa0598860 | 0.801501 | 8.739380e-49 | -8.615850e-47 |
Msa0593650 | Msa0598860 | 0.811195 | 7.904406e-51 | -8.615850e-47 |
Msa0598720 | Msa0598860 | 0.831854 | 1.318230e-55 | -8.615850e-47 |
Msa0598810 | Msa0598860 | 0.854267 | 1.379599e-61 | -8.615850e-47 |
Msa0598860 | Msa0601850 | 0.806292 | 8.830909e-50 | -8.615850e-47 |
Msa0598860 | Msa0607050 | 0.817856 | 2.654643e-52 | -8.615850e-47 |
Msa0598860 | Msa0610430 | 0.844868 | 5.791547e-59 | -8.615850e-47 |
Msa0598860 | Msa0625720 | 0.818640 | 1.763692e-52 | -8.615850e-47 |
Msa0598860 | Msa0632870 | 0.802296 | 6.002056e-49 | -8.615850e-47 |
Msa0598860 | Msa0636070 | 0.804059 | 2.590577e-49 | -8.615850e-47 |
Msa0598860 | Msa0643180 | 0.822279 | 2.579313e-53 | -8.615850e-47 |
Msa0598860 | Msa0643560 | 0.807175 | 5.746722e-50 | -8.615850e-47 |
Msa0598860 | Msa0644850 | 0.815854 | 7.468850e-52 | -8.615850e-47 |
Msa0598860 | Msa0657970 | 0.802208 | 6.255568e-49 | -8.615850e-47 |
Msa0598860 | Msa0661190 | -0.813298 | 2.747031e-51 | -8.615850e-47 |
Msa0598860 | Msa0661650 | 0.806747 | 7.078920e-50 | -8.615850e-47 |
Msa0598860 | Msa0663390 | 0.831705 | 1.435008e-55 | -8.615850e-47 |
Msa0598860 | Msa0673460 | 0.819120 | 1.372550e-52 | -8.615850e-47 |
Msa0598860 | Msa0674580 | 0.803696 | 3.081240e-49 | -8.615850e-47 |
Msa0598860 | Msa0682840 | 0.817654 | 2.947766e-52 | -8.615850e-47 |
Msa0598860 | Msa0688960 | 0.801296 | 9.625980e-49 | -8.615850e-47 |
Msa0598860 | Msa0689260 | 0.810786 | 9.691652e-51 | -8.615850e-47 |
Msa0598860 | Msa0692830 | 0.818909 | 1.532287e-52 | -8.615850e-47 |
Msa0598860 | Msa0692950 | 0.824091 | 9.736826e-54 | -8.615850e-47 |
Msa0598860 | Msa0707250 | 0.806917 | 6.517872e-50 | -8.615850e-47 |
Msa0598860 | Msa0708520 | 0.812569 | 3.968254e-51 | -8.615850e-47 |
Msa0598860 | Msa0711780 | 0.816056 | 6.730927e-52 | -8.615850e-47 |
Msa0598860 | Msa0715700 | 0.804689 | 1.914993e-49 | -8.615850e-47 |
Msa0598860 | Msa0716840 | 0.837481 | 5.066973e-57 | -8.615850e-47 |
Msa0598860 | Msa0743720 | 0.812262 | 4.631730e-51 | -8.615850e-47 |
Msa0598860 | Msa0743950 | 0.812856 | 3.433972e-51 | -8.615850e-47 |
Msa0598860 | Msa0745790 | 0.810462 | 1.139068e-50 | -8.615850e-47 |
Msa0598860 | Msa0769920 | 0.808637 | 2.808527e-50 | -8.615850e-47 |
Msa0598860 | Msa0790660 | -0.801116 | 1.048055e-48 | -8.615850e-47 |
Msa0598860 | Msa0793800 | 0.843516 | 1.335405e-58 | -8.615850e-47 |
Msa0598860 | Msa0794670 | 0.820357 | 7.160089e-53 | -8.615850e-47 |
Msa0598860 | Msa0795090 | 0.805455 | 1.323924e-49 | -8.615850e-47 |
Msa0598860 | Msa0796530 | 0.810765 | 9.797466e-51 | -8.615850e-47 |
Msa0598860 | Msa0808270 | 0.851846 | 6.803206e-61 | -8.615850e-47 |
Msa0598860 | Msa0813740 | 0.814433 | 1.544197e-51 | -8.615850e-47 |
Msa0598860 | Msa0816700 | 0.807819 | 4.194781e-50 | -8.615850e-47 |
Msa0598860 | Msa0831530 | 0.805476 | 1.310768e-49 | -8.615850e-47 |
Msa0598860 | Msa0864250 | 0.819722 | 1.000530e-52 | -8.615850e-47 |
Msa0598860 | Msa0866550 | 0.824111 | 9.631770e-54 | -8.615850e-47 |
Msa0598860 | Msa0871270 | 0.826360 | 2.830655e-54 | -8.615850e-47 |
Msa0598860 | Msa0880140 | 0.812396 | 4.329003e-51 | -8.615850e-47 |
Msa0598860 | Msa0892120 | 0.801249 | 9.843090e-49 | -8.615850e-47 |
Msa0598860 | Msa0897330 | 0.814072 | 1.855727e-51 | -8.615850e-47 |
Msa0598860 | Msa0920870 | 0.807987 | 3.863507e-50 | -8.615850e-47 |
Msa0598860 | Msa0938220 | 0.835802 | 1.357621e-56 | -8.615850e-47 |
Msa0598860 | Msa0944190 | 0.801754 | 7.757246e-49 | -8.615850e-47 |
Msa0598860 | Msa0945970 | 0.805004 | 1.645187e-49 | -8.615850e-47 |
Msa0598860 | Msa0947660 | 0.809288 | 2.037647e-50 | -8.615850e-47 |
Msa0598860 | Msa0968680 | 0.802245 | 6.146324e-49 | -8.615850e-47 |
Msa0598860 | Msa0969810 | 0.803386 | 3.573017e-49 | -8.615850e-47 |
Msa0598860 | Msa0974070 | 0.836062 | 1.165857e-56 | -8.615850e-47 |
Msa0598860 | Msa0975340 | 0.803324 | 3.680144e-49 | -8.615850e-47 |
Msa0598860 | Msa0999970 | 0.820661 | 6.096917e-53 | -8.615850e-47 |
Msa0598860 | Msa1003620 | 0.815857 | 7.455689e-52 | -8.615850e-47 |
Msa0598860 | Msa1009820 | 0.832258 | 1.047704e-55 | -8.615850e-47 |
Msa0598860 | Msa1014540 | 0.824711 | 6.961294e-54 | -8.615850e-47 |
Msa0598860 | Msa1046460 | 0.813719 | 2.220244e-51 | -8.615850e-47 |
Msa0598860 | Msa1051200 | 0.849634 | 2.851035e-60 | -8.615850e-47 |
Msa0598860 | Msa1075540 | 0.820049 | 8.420905e-53 | -8.615850e-47 |
Msa0598860 | Msa1082500 | 0.802241 | 6.159155e-49 | -8.615850e-47 |
Msa0598860 | Msa1087710 | 0.822546 | 2.236074e-53 | -8.615850e-47 |
Msa0598860 | Msa1088640 | 0.816558 | 5.197603e-52 | -8.615850e-47 |
Msa0598860 | Msa1100050 | 0.812649 | 3.812952e-51 | -8.615850e-47 |
Msa0598860 | Msa1103980 | 0.823227 | 1.551840e-53 | -8.615850e-47 |
Msa0598860 | Msa1104090 | 0.806079 | 9.789699e-50 | -8.615850e-47 |
Msa0598860 | Msa1104370 | 0.808775 | 2.623436e-50 | -8.615850e-47 |
Msa0598860 | Msa1113170 | 0.812137 | 4.933004e-51 | -8.615850e-47 |
Msa0598860 | Msa1131220 | 0.819224 | 1.299497e-52 | -8.615850e-47 |
Msa0598860 | Msa1135470 | 0.801029 | 1.092021e-48 | -8.615850e-47 |
Msa0598860 | Msa1137700 | 0.819534 | 1.104331e-52 | -8.615850e-47 |
Msa0598860 | Msa1147900 | 0.810145 | 1.333065e-50 | -8.615850e-47 |
Msa0598860 | Msa1151910 | 0.800352 | 1.500754e-48 | -8.615850e-47 |
Msa0598860 | Msa1154280 | 0.808134 | 3.595882e-50 | -8.615850e-47 |
Msa0598860 | Msa1162270 | 0.809833 | 1.555928e-50 | -8.615850e-47 |
Msa0598860 | Msa1162780 | 0.812687 | 3.739547e-51 | -8.615850e-47 |
Msa0598860 | Msa1186950 | -0.803297 | 3.728732e-49 | -8.615850e-47 |
Msa0598860 | Msa1208880 | 0.803010 | 4.274786e-49 | -8.615850e-47 |
Msa0598860 | Msa1210020 | 0.818433 | 1.964985e-52 | -8.615850e-47 |
Msa0598860 | Msa1211890 | 0.818232 | 2.182112e-52 | -8.615850e-47 |
Msa0598860 | Msa1224810 | 0.800262 | 1.564824e-48 | -8.615850e-47 |
Msa0598860 | Msa1226660 | 0.801882 | 7.299687e-49 | -8.615850e-47 |
Msa0598860 | Msa1233890 | 0.800383 | 1.478561e-48 | -8.615850e-47 |
Msa0598860 | Msa1252140 | 0.801876 | 7.321936e-49 | -8.615850e-47 |
Msa0598860 | Msa1253020 | 0.817260 | 3.615627e-52 | -8.615850e-47 |
Msa0598860 | Msa1259060 | 0.801932 | 7.128399e-49 | -8.615850e-47 |
Msa0598860 | Msa1275360 | 0.805839 | 1.099962e-49 | -8.615850e-47 |
Msa0598860 | Msa1277660 | 0.806366 | 8.518450e-50 | -8.615850e-47 |
Msa0598860 | Msa1298510 | 0.819382 | 1.196037e-52 | -8.615850e-47 |
Msa0598860 | Msa1302850 | 0.801000 | 1.106653e-48 | -8.615850e-47 |
Msa0598860 | Msa1305340 | 0.807036 | 6.148862e-50 | -8.615850e-47 |
Msa0598860 | Msa1316780 | 0.800918 | 1.150268e-48 | -8.615850e-47 |
Msa0598860 | Msa1332040 | -0.801085 | 1.063145e-48 | -8.615850e-47 |
Msa0598860 | Msa1340470 | 0.811135 | 8.145513e-51 | -8.615850e-47 |
Msa0598860 | Msa1351620 | 0.807889 | 4.054867e-50 | -8.615850e-47 |
Msa0598860 | Msa1353330 | 0.826917 | 2.084651e-54 | -8.615850e-47 |
Msa0598860 | Msa1358250 | 0.810822 | 9.522110e-51 | -8.615850e-47 |
Msa0598860 | Msa1359040 | 0.826395 | 2.777064e-54 | -8.615850e-47 |
Msa0598860 | Msa1375560 | 0.806295 | 8.815057e-50 | -8.615850e-47 |
Msa0598860 | Msa1386780 | 0.838768 | 2.363694e-57 | -8.615850e-47 |
Msa0598860 | Msa1389800 | 0.814988 | 1.163873e-51 | -8.615850e-47 |
Msa0598860 | Msa1392780 | 0.805761 | 1.141761e-49 | -8.615850e-47 |
Msa0598860 | Msa1419800 | -0.811205 | 7.867382e-51 | -8.615850e-47 |
Msa0598860 | Msa1424750 | 0.813606 | 2.351129e-51 | -8.615850e-47 |
Msa0598860 | Msa1426030 | 0.808812 | 2.576498e-50 | -8.615850e-47 |
Msa0598860 | Msa1433390 | 0.801556 | 8.516029e-49 | -8.615850e-47 |
Msa0598860 | Msa1454480 | 0.811914 | 5.515230e-51 | -8.615850e-47 |
Msa0598860 | Msa1457920 | 0.804221 | 2.397418e-49 | -8.615850e-47 |
Msa0598860 | Msa1466300 | 0.806794 | 6.918871e-50 | -8.615850e-47 |
Msa0598860 | Msa1466540 | 0.802623 | 5.139560e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598860 | MtrunA17_Chr4g0022511 | 97.403 | 154 | 4 | 0 | 1 | 154 | 1 | 154 | 3.68e-111 | 312 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0598860 | AT1G03650.1 | 68.421 | 152 | 45 | 1 | 6 | 154 | 6 | 157 | 8.93e-74 | 218 |
Find 37 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCAACGGTGACAATATTT+AGG | 0.161108 | 4_2:-36595092 | None:intergenic |
CAGGTTATGTCATGTATTCT+TGG | 0.193464 | 4_2:+36595336 | Msa0598860:CDS |
CACGTTGATGCCCAACTTGC+AGG | 0.261704 | 4_2:+36595317 | Msa0598860:CDS |
AGTGGAAGAGATAGTGAAAT+TGG | 0.277192 | 4_2:+36595208 | Msa0598860:CDS |
TTAAACAAACACAATATTAC+AGG | 0.325566 | 4_2:-36596662 | None:intergenic |
GAAGCGAGTGATTCGTGTTT+GGG | 0.367842 | 4_2:-36595245 | None:intergenic |
GGAAGCGAGTGATTCGTGTT+TGG | 0.373847 | 4_2:-36595246 | None:intergenic |
TGCAACGGTGACAATATTTA+GGG | 0.394824 | 4_2:-36595091 | None:intergenic |
TGGCTTTCATGTTGACTGTT+TGG | 0.425497 | 4_2:+36596474 | Msa0598860:CDS |
CATGACATAACCTGCAAGTT+GGG | 0.434152 | 4_2:-36595327 | None:intergenic |
TTGATTCTGTTTCTCTGCAA+CGG | 0.467497 | 4_2:-36595106 | None:intergenic |
TGGACTTCGATTCAAATTGA+AGG | 0.474763 | 4_2:+36596542 | Msa0598860:CDS |
CATGTTGACTGTTTGGTCGT+AGG | 0.477074 | 4_2:+36596481 | Msa0598860:CDS |
TATTTGATGGACTAAATTGA+CGG | 0.491712 | 4_2:-36595046 | None:intergenic |
AAATGCTTATAGAATGTACT+TGG | 0.517363 | 4_2:+36596522 | Msa0598860:CDS |
CAATGGAGGAGGCAAGGACA+TGG | 0.517780 | 4_2:+36596340 | Msa0598860:CDS |
CGCACGAGTGATGGCAAATG+TGG | 0.525694 | 4_2:+36595151 | Msa0598860:exon |
ACATGACATAACCTGCAAGT+TGG | 0.533996 | 4_2:-36595328 | None:intergenic |
GGAGTTGGAACCTGCGAGCT+TGG | 0.538376 | 4_2:-36595384 | None:intergenic |
GCAGAACAAGAAAAGTTTCG+CGG | 0.541873 | 4_2:+36596395 | Msa0598860:CDS |
GCTTCTATCACCAAGCTCGC+AGG | 0.549548 | 4_2:+36595374 | Msa0598860:CDS |
GCTTACTCACGCACGAGTGA+TGG | 0.555036 | 4_2:+36595142 | Msa0598860:exon |
AAGGAGCAATGGAGGAGGCA+AGG | 0.558770 | 4_2:+36596334 | Msa0598860:CDS |
TGCTTCACGTCGATCCGTTG+AGG | 0.562820 | 4_2:+36596422 | Msa0598860:CDS |
ATAGAAGCATACAATGAAGA+AGG | 0.562971 | 4_2:-36595359 | None:intergenic |
CTTCTGTAGTGAAGGAGCAA+TGG | 0.596774 | 4_2:+36596323 | Msa0598860:intron |
CTGAATCTGTACAAGAAGCA+TGG | 0.599242 | 4_2:+36596454 | Msa0598860:CDS |
CTGTAGTGAAGGAGCAATGG+AGG | 0.602271 | 4_2:+36596326 | Msa0598860:intron |
TAGTGAAGGAGCAATGGAGG+AGG | 0.603189 | 4_2:+36596329 | Msa0598860:intron |
GGAACATTGTGTTTGTAACA+TGG | 0.606394 | 4_2:+36596622 | Msa0598860:three_prime_UTR |
TTCAGCGCAGGTGTCCTCAA+CGG | 0.620997 | 4_2:-36596436 | None:intergenic |
TTCTTGTACAGATTCAGCGC+AGG | 0.621123 | 4_2:-36596448 | None:intergenic |
CAGAAACAGTGGTAAAGCAG+TGG | 0.623501 | 4_2:+36595190 | Msa0598860:CDS |
GGAACATTGTGTTTGTGACA+TGG | 0.627922 | 4_2:+36596702 | Msa0598860:three_prime_UTR |
TGGAGAGGTTCTACTGAAAG+CGG | 0.629168 | 4_2:+36596360 | Msa0598860:CDS |
TTAGAACTTGACAGAAACAG+TGG | 0.638839 | 4_2:+36595179 | Msa0598860:CDS |
GAGGAGGCAAGGACATGGAG+AGG | 0.658915 | 4_2:+36596345 | Msa0598860:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAACTATCTTTAATATA+AGG | + | chr4_2:36596184-36596203 | Msa0598860:intron | 10.0% |
!! | ATTAACTATCTTTAATATAA+GGG | + | chr4_2:36596185-36596204 | Msa0598860:intron | 10.0% |
!! | AATTAACTATCTTTAATATA+AGG | + | chr4_2:36596184-36596203 | Msa0598860:intron | 10.0% |
!! | ATTAACTATCTTTAATATAA+GGG | + | chr4_2:36596185-36596204 | Msa0598860:intron | 10.0% |
!!! | ATAGATTTTCATATATTTGA+TGG | - | chr4_2:36595062-36595081 | None:intergenic | 15.0% |
!! | AAAGAAATTATCCAATTTAT+AGG | + | chr4_2:36595777-36595796 | Msa0598860:intron | 15.0% |
!! | AAGAAATTATCCAATTTATA+GGG | + | chr4_2:36595778-36595797 | Msa0598860:intron | 15.0% |
!! | ATAAGAAATTGCAAAAAAAT+TGG | + | chr4_2:36595830-36595849 | Msa0598860:intron | 15.0% |
!!! | ATAGATTTTCATATATTTGA+TGG | - | chr4_2:36595062-36595081 | None:intergenic | 15.0% |
!! | AAAGAAATTATCCAATTTAT+AGG | + | chr4_2:36595777-36595796 | Msa0598860:intron | 15.0% |
!! | AAGAAATTATCCAATTTATA+GGG | + | chr4_2:36595778-36595797 | Msa0598860:intron | 15.0% |
!! | ATAAGAAATTGCAAAAAAAT+TGG | + | chr4_2:36595830-36595849 | Msa0598860:intron | 15.0% |
!! | AGAAATTATCCAATTTATAG+GGG | + | chr4_2:36595779-36595798 | Msa0598860:intron | 20.0% |
!! | TTATATTAACCCCTATAAAT+TGG | - | chr4_2:36595791-36595810 | None:intergenic | 20.0% |
!! | TTAAACAAACACAATATTAC+AGG | - | chr4_2:36596665-36596684 | None:intergenic | 20.0% |
!! | AGAAATTATCCAATTTATAG+GGG | + | chr4_2:36595779-36595798 | Msa0598860:intron | 20.0% |
!! | TTATATTAACCCCTATAAAT+TGG | - | chr4_2:36595791-36595810 | None:intergenic | 20.0% |
!! | TTAAACAAACACAATATTAC+AGG | - | chr4_2:36596665-36596684 | None:intergenic | 20.0% |
!!! | TATTTGATGGACTAAATTGA+CGG | - | chr4_2:36595049-36595068 | None:intergenic | 25.0% |
!!! | TTTGAGTTCATTTTCAAAGA+AGG | - | chr4_2:36595270-36595289 | None:intergenic | 25.0% |
!!! | CAATTTTTCAAACAGCTTAT+AGG | - | chr4_2:36595436-36595455 | None:intergenic | 25.0% |
!! | AAAATTGTCTAAGTGTGTTT+TGG | + | chr4_2:36595449-36595468 | Msa0598860:intron | 25.0% |
!!! | CTCAGGTTTTATAATAATTC+TGG | - | chr4_2:36595689-36595708 | None:intergenic | 25.0% |
! | AAAATTTGCAACCCATTTAT+AGG | + | chr4_2:36595714-36595733 | Msa0598860:intron | 25.0% |
! | AAATTTGCAACCCATTTATA+GGG | + | chr4_2:36595715-36595734 | Msa0598860:intron | 25.0% |
! | TTATGTAAACCCCTATAAAT+GGG | - | chr4_2:36595728-36595747 | None:intergenic | 25.0% |
! | AAATTGCAAAAAAATTGGAC+CGG | + | chr4_2:36595835-36595854 | Msa0598860:intron | 25.0% |
! | CTAAACTATTGAAAGATAGT+AGG | - | chr4_2:36595980-36595999 | None:intergenic | 25.0% |
! | ATACAAGCATTTCATTAGTT+GGG | - | chr4_2:36596242-36596261 | None:intergenic | 25.0% |
! | ACAATATGGGTATGTAATAT+GGG | + | chr4_2:36596289-36596308 | Msa0598860:intron | 25.0% |
! | AAATGCTTATAGAATGTACT+TGG | + | chr4_2:36596522-36596541 | Msa0598860:CDS | 25.0% |
!! | CACTTTTATATACGTTATCA+TGG | + | chr4_2:36596579-36596598 | Msa0598860:three_prime_UTR | 25.0% |
! | GTCAATTCAAAAAACAGATT+TGG | + | chr4_2:36596601-36596620 | Msa0598860:three_prime_UTR | 25.0% |
! | TTAAGCACTAAAAACAAATC+TGG | + | chr4_2:36596681-36596700 | Msa0598860:three_prime_UTR | 25.0% |
!!! | TATTTGATGGACTAAATTGA+CGG | - | chr4_2:36595049-36595068 | None:intergenic | 25.0% |
!!! | TTTGAGTTCATTTTCAAAGA+AGG | - | chr4_2:36595270-36595289 | None:intergenic | 25.0% |
!!! | CAATTTTTCAAACAGCTTAT+AGG | - | chr4_2:36595436-36595455 | None:intergenic | 25.0% |
!! | AAAATTGTCTAAGTGTGTTT+TGG | + | chr4_2:36595449-36595468 | Msa0598860:intron | 25.0% |
!!! | CTCAGGTTTTATAATAATTC+TGG | - | chr4_2:36595689-36595708 | None:intergenic | 25.0% |
! | AAAATTTGCAACCCATTTAT+AGG | + | chr4_2:36595714-36595733 | Msa0598860:intron | 25.0% |
! | AAATTTGCAACCCATTTATA+GGG | + | chr4_2:36595715-36595734 | Msa0598860:intron | 25.0% |
! | TTATGTAAACCCCTATAAAT+GGG | - | chr4_2:36595728-36595747 | None:intergenic | 25.0% |
! | AAATTGCAAAAAAATTGGAC+CGG | + | chr4_2:36595835-36595854 | Msa0598860:intron | 25.0% |
! | CTAAACTATTGAAAGATAGT+AGG | - | chr4_2:36595980-36595999 | None:intergenic | 25.0% |
! | ATACAAGCATTTCATTAGTT+GGG | - | chr4_2:36596242-36596261 | None:intergenic | 25.0% |
! | ACAATATGGGTATGTAATAT+GGG | + | chr4_2:36596289-36596308 | Msa0598860:intron | 25.0% |
! | AAATGCTTATAGAATGTACT+TGG | + | chr4_2:36596522-36596541 | Msa0598860:CDS | 25.0% |
!! | CACTTTTATATACGTTATCA+TGG | + | chr4_2:36596579-36596598 | Msa0598860:three_prime_UTR | 25.0% |
! | GTCAATTCAAAAAACAGATT+TGG | + | chr4_2:36596601-36596620 | Msa0598860:three_prime_UTR | 25.0% |
! | TTAAGCACTAAAAACAAATC+TGG | + | chr4_2:36596681-36596700 | Msa0598860:three_prime_UTR | 25.0% |
! | ATAGAAGCATACAATGAAGA+AGG | - | chr4_2:36595362-36595381 | None:intergenic | 30.0% |
CTTGAAAGCTTAAAAAAGAG+TGG | - | chr4_2:36595408-36595427 | None:intergenic | 30.0% | |
!!! | GTTGCAAATTTTTTTTGCTC+AGG | - | chr4_2:36595706-36595725 | None:intergenic | 30.0% |
AATTTGCAACCCATTTATAG+GGG | + | chr4_2:36595716-36595735 | Msa0598860:intron | 30.0% | |
CTTATGTAAACCCCTATAAA+TGG | - | chr4_2:36595729-36595748 | None:intergenic | 30.0% | |
!! | ACTAAGTTGATGTATTAAGG+GGG | - | chr4_2:36595940-36595959 | None:intergenic | 30.0% |
!! | GACTAAGTTGATGTATTAAG+GGG | - | chr4_2:36595941-36595960 | None:intergenic | 30.0% |
!! | CGACTAAGTTGATGTATTAA+GGG | - | chr4_2:36595942-36595961 | None:intergenic | 30.0% |
!! | ACGACTAAGTTGATGTATTA+AGG | - | chr4_2:36595943-36595962 | None:intergenic | 30.0% |
TAATACATCAACTTAGTCGT+TGG | + | chr4_2:36595943-36595962 | Msa0598860:intron | 30.0% | |
CATACAAGCATTTCATTAGT+TGG | - | chr4_2:36596243-36596262 | None:intergenic | 30.0% | |
! | TTTGTTGGTTACTCACAATA+TGG | + | chr4_2:36596275-36596294 | Msa0598860:intron | 30.0% |
! | TTGTTGGTTACTCACAATAT+GGG | + | chr4_2:36596276-36596295 | Msa0598860:intron | 30.0% |
CACAATATGGGTATGTAATA+TGG | + | chr4_2:36596288-36596307 | Msa0598860:intron | 30.0% | |
! | GTATGTAATATGGGATGTTT+TGG | + | chr4_2:36596298-36596317 | Msa0598860:intron | 30.0% |
! | ATAGAAGCATACAATGAAGA+AGG | - | chr4_2:36595362-36595381 | None:intergenic | 30.0% |
CTTGAAAGCTTAAAAAAGAG+TGG | - | chr4_2:36595408-36595427 | None:intergenic | 30.0% | |
!!! | GTTGCAAATTTTTTTTGCTC+AGG | - | chr4_2:36595706-36595725 | None:intergenic | 30.0% |
AATTTGCAACCCATTTATAG+GGG | + | chr4_2:36595716-36595735 | Msa0598860:intron | 30.0% | |
CTTATGTAAACCCCTATAAA+TGG | - | chr4_2:36595729-36595748 | None:intergenic | 30.0% | |
!! | ACTAAGTTGATGTATTAAGG+GGG | - | chr4_2:36595940-36595959 | None:intergenic | 30.0% |
!! | GACTAAGTTGATGTATTAAG+GGG | - | chr4_2:36595941-36595960 | None:intergenic | 30.0% |
!! | CGACTAAGTTGATGTATTAA+GGG | - | chr4_2:36595942-36595961 | None:intergenic | 30.0% |
!! | ACGACTAAGTTGATGTATTA+AGG | - | chr4_2:36595943-36595962 | None:intergenic | 30.0% |
TAATACATCAACTTAGTCGT+TGG | + | chr4_2:36595943-36595962 | Msa0598860:intron | 30.0% | |
CATACAAGCATTTCATTAGT+TGG | - | chr4_2:36596243-36596262 | None:intergenic | 30.0% | |
! | TTTGTTGGTTACTCACAATA+TGG | + | chr4_2:36596275-36596294 | Msa0598860:intron | 30.0% |
! | TTGTTGGTTACTCACAATAT+GGG | + | chr4_2:36596276-36596295 | Msa0598860:intron | 30.0% |
CACAATATGGGTATGTAATA+TGG | + | chr4_2:36596288-36596307 | Msa0598860:intron | 30.0% | |
! | GTATGTAATATGGGATGTTT+TGG | + | chr4_2:36596298-36596317 | Msa0598860:intron | 30.0% |
TGCAACGGTGACAATATTTA+GGG | - | chr4_2:36595094-36595113 | None:intergenic | 35.0% | |
! | TTGATTCTGTTTCTCTGCAA+CGG | - | chr4_2:36595109-36595128 | None:intergenic | 35.0% |
TTAGAACTTGACAGAAACAG+TGG | + | chr4_2:36595179-36595198 | Msa0598860:CDS | 35.0% | |
AGTGGAAGAGATAGTGAAAT+TGG | + | chr4_2:36595208-36595227 | Msa0598860:CDS | 35.0% | |
GAACTCAAAAAGAAGAACAG+TGG | + | chr4_2:36595281-36595300 | Msa0598860:CDS | 35.0% | |
CAGGTTATGTCATGTATTCT+TGG | + | chr4_2:36595336-36595355 | Msa0598860:CDS | 35.0% | |
AGCTTAAAAAAGAGTGGAGT+TGG | - | chr4_2:36595402-36595421 | None:intergenic | 35.0% | |
! | TTTTGTAAGTGTGACTCTGT+TGG | + | chr4_2:36595598-36595617 | Msa0598860:intron | 35.0% |
TGATTTGAGCAAAAGGCTAA+AGG | - | chr4_2:36595907-36595926 | None:intergenic | 35.0% | |
!! | ACTCAACTGATTTGAGCAAA+AGG | - | chr4_2:36595914-36595933 | None:intergenic | 35.0% |
CAATGTCGATATAGTTAGGT+TGG | - | chr4_2:36596151-36596170 | None:intergenic | 35.0% | |
CTGACAATGTCGATATAGTT+AGG | - | chr4_2:36596155-36596174 | None:intergenic | 35.0% | |
CTATATCGACATTGTCAGTT+AGG | + | chr4_2:36596157-36596176 | Msa0598860:intron | 35.0% | |
!! | ATGCGAATCCTTTGATTTGT+TGG | + | chr4_2:36596260-36596279 | Msa0598860:intron | 35.0% |
GTGAGTAACCAACAAATCAA+AGG | - | chr4_2:36596271-36596290 | None:intergenic | 35.0% | |
!!! | TTTTGGTTCTTCTGTAGTGA+AGG | + | chr4_2:36596315-36596334 | Msa0598860:intron | 35.0% |
TGGACTTCGATTCAAATTGA+AGG | + | chr4_2:36596542-36596561 | Msa0598860:CDS | 35.0% | |
GGAACATTGTGTTTGTAACA+TGG | + | chr4_2:36596622-36596641 | Msa0598860:three_prime_UTR | 35.0% | |
TGCAACGGTGACAATATTTA+GGG | - | chr4_2:36595094-36595113 | None:intergenic | 35.0% | |
! | TTGATTCTGTTTCTCTGCAA+CGG | - | chr4_2:36595109-36595128 | None:intergenic | 35.0% |
TTAGAACTTGACAGAAACAG+TGG | + | chr4_2:36595179-36595198 | Msa0598860:CDS | 35.0% | |
AGTGGAAGAGATAGTGAAAT+TGG | + | chr4_2:36595208-36595227 | Msa0598860:CDS | 35.0% | |
GAACTCAAAAAGAAGAACAG+TGG | + | chr4_2:36595281-36595300 | Msa0598860:CDS | 35.0% | |
CAGGTTATGTCATGTATTCT+TGG | + | chr4_2:36595336-36595355 | Msa0598860:CDS | 35.0% | |
AGCTTAAAAAAGAGTGGAGT+TGG | - | chr4_2:36595402-36595421 | None:intergenic | 35.0% | |
! | TTTTGTAAGTGTGACTCTGT+TGG | + | chr4_2:36595598-36595617 | Msa0598860:intron | 35.0% |
TGATTTGAGCAAAAGGCTAA+AGG | - | chr4_2:36595907-36595926 | None:intergenic | 35.0% | |
!! | ACTCAACTGATTTGAGCAAA+AGG | - | chr4_2:36595914-36595933 | None:intergenic | 35.0% |
CAATGTCGATATAGTTAGGT+TGG | - | chr4_2:36596151-36596170 | None:intergenic | 35.0% | |
CTGACAATGTCGATATAGTT+AGG | - | chr4_2:36596155-36596174 | None:intergenic | 35.0% | |
CTATATCGACATTGTCAGTT+AGG | + | chr4_2:36596157-36596176 | Msa0598860:intron | 35.0% | |
!! | ATGCGAATCCTTTGATTTGT+TGG | + | chr4_2:36596260-36596279 | Msa0598860:intron | 35.0% |
GTGAGTAACCAACAAATCAA+AGG | - | chr4_2:36596271-36596290 | None:intergenic | 35.0% | |
!!! | TTTTGGTTCTTCTGTAGTGA+AGG | + | chr4_2:36596315-36596334 | Msa0598860:intron | 35.0% |
TGGACTTCGATTCAAATTGA+AGG | + | chr4_2:36596542-36596561 | Msa0598860:CDS | 35.0% | |
GGAACATTGTGTTTGTAACA+TGG | + | chr4_2:36596622-36596641 | Msa0598860:three_prime_UTR | 35.0% | |
CTGCAACGGTGACAATATTT+AGG | - | chr4_2:36595095-36595114 | None:intergenic | 40.0% | |
CATGACATAACCTGCAAGTT+GGG | - | chr4_2:36595330-36595349 | None:intergenic | 40.0% | |
ACATGACATAACCTGCAAGT+TGG | - | chr4_2:36595331-36595350 | None:intergenic | 40.0% | |
! | CTGTTGGTAAGCTTGGATAT+TGG | + | chr4_2:36595614-36595633 | Msa0598860:intron | 40.0% |
AAGCTTGGATATTGGTATGC+AGG | + | chr4_2:36595622-36595641 | Msa0598860:intron | 40.0% | |
AGCTTGGATATTGGTATGCA+GGG | + | chr4_2:36595623-36595642 | Msa0598860:intron | 40.0% | |
CTGTGTGTGTGAATTTCATG+TGG | - | chr4_2:36596094-36596113 | None:intergenic | 40.0% | |
GCAGAACAAGAAAAGTTTCG+CGG | + | chr4_2:36596395-36596414 | Msa0598860:CDS | 40.0% | |
CTGAATCTGTACAAGAAGCA+TGG | + | chr4_2:36596454-36596473 | Msa0598860:CDS | 40.0% | |
! | TGGCTTTCATGTTGACTGTT+TGG | + | chr4_2:36596474-36596493 | Msa0598860:CDS | 40.0% |
GGAACATTGTGTTTGTGACA+TGG | + | chr4_2:36596702-36596721 | Msa0598860:three_prime_UTR | 40.0% | |
CTGCAACGGTGACAATATTT+AGG | - | chr4_2:36595095-36595114 | None:intergenic | 40.0% | |
CATGACATAACCTGCAAGTT+GGG | - | chr4_2:36595330-36595349 | None:intergenic | 40.0% | |
ACATGACATAACCTGCAAGT+TGG | - | chr4_2:36595331-36595350 | None:intergenic | 40.0% | |
! | CTGTTGGTAAGCTTGGATAT+TGG | + | chr4_2:36595614-36595633 | Msa0598860:intron | 40.0% |
AAGCTTGGATATTGGTATGC+AGG | + | chr4_2:36595622-36595641 | Msa0598860:intron | 40.0% | |
AGCTTGGATATTGGTATGCA+GGG | + | chr4_2:36595623-36595642 | Msa0598860:intron | 40.0% | |
CTGTGTGTGTGAATTTCATG+TGG | - | chr4_2:36596094-36596113 | None:intergenic | 40.0% | |
GCAGAACAAGAAAAGTTTCG+CGG | + | chr4_2:36596395-36596414 | Msa0598860:CDS | 40.0% | |
CTGAATCTGTACAAGAAGCA+TGG | + | chr4_2:36596454-36596473 | Msa0598860:CDS | 40.0% | |
! | TGGCTTTCATGTTGACTGTT+TGG | + | chr4_2:36596474-36596493 | Msa0598860:CDS | 40.0% |
GGAACATTGTGTTTGTGACA+TGG | + | chr4_2:36596702-36596721 | Msa0598860:three_prime_UTR | 40.0% | |
CAGAAACAGTGGTAAAGCAG+TGG | + | chr4_2:36595190-36595209 | Msa0598860:CDS | 45.0% | |
GAAGCGAGTGATTCGTGTTT+GGG | - | chr4_2:36595248-36595267 | None:intergenic | 45.0% | |
! | TGTGACTCTGTTGGTAAGCT+TGG | + | chr4_2:36595607-36595626 | Msa0598860:intron | 45.0% |
GGATATTGGTATGCAGGGTT+CGG | + | chr4_2:36595628-36595647 | Msa0598860:intron | 45.0% | |
GATATTGGTATGCAGGGTTC+GGG | + | chr4_2:36595629-36595648 | Msa0598860:intron | 45.0% | |
TGAGCAAAAGGCTAAAGGCA+GGG | - | chr4_2:36595902-36595921 | None:intergenic | 45.0% | |
TTGAGCAAAAGGCTAAAGGC+AGG | - | chr4_2:36595903-36595922 | None:intergenic | 45.0% | |
AATTCACACACACAGCTGCA+AGG | + | chr4_2:36596099-36596118 | Msa0598860:intron | 45.0% | |
CTTCTGTAGTGAAGGAGCAA+TGG | + | chr4_2:36596323-36596342 | Msa0598860:intron | 45.0% | |
TGGAGAGGTTCTACTGAAAG+CGG | + | chr4_2:36596360-36596379 | Msa0598860:CDS | 45.0% | |
TTCTTGTACAGATTCAGCGC+AGG | - | chr4_2:36596451-36596470 | None:intergenic | 45.0% | |
! | CATGTTGACTGTTTGGTCGT+AGG | + | chr4_2:36596481-36596500 | Msa0598860:CDS | 45.0% |
CAGAAACAGTGGTAAAGCAG+TGG | + | chr4_2:36595190-36595209 | Msa0598860:CDS | 45.0% | |
GAAGCGAGTGATTCGTGTTT+GGG | - | chr4_2:36595248-36595267 | None:intergenic | 45.0% | |
! | TGTGACTCTGTTGGTAAGCT+TGG | + | chr4_2:36595607-36595626 | Msa0598860:intron | 45.0% |
GGATATTGGTATGCAGGGTT+CGG | + | chr4_2:36595628-36595647 | Msa0598860:intron | 45.0% | |
GATATTGGTATGCAGGGTTC+GGG | + | chr4_2:36595629-36595648 | Msa0598860:intron | 45.0% | |
TGAGCAAAAGGCTAAAGGCA+GGG | - | chr4_2:36595902-36595921 | None:intergenic | 45.0% | |
TTGAGCAAAAGGCTAAAGGC+AGG | - | chr4_2:36595903-36595922 | None:intergenic | 45.0% | |
AATTCACACACACAGCTGCA+AGG | + | chr4_2:36596099-36596118 | Msa0598860:intron | 45.0% | |
CTTCTGTAGTGAAGGAGCAA+TGG | + | chr4_2:36596323-36596342 | Msa0598860:intron | 45.0% | |
TGGAGAGGTTCTACTGAAAG+CGG | + | chr4_2:36596360-36596379 | Msa0598860:CDS | 45.0% | |
TTCTTGTACAGATTCAGCGC+AGG | - | chr4_2:36596451-36596470 | None:intergenic | 45.0% | |
! | CATGTTGACTGTTTGGTCGT+AGG | + | chr4_2:36596481-36596500 | Msa0598860:CDS | 45.0% |
GGAAGCGAGTGATTCGTGTT+TGG | - | chr4_2:36595249-36595268 | None:intergenic | 50.0% | |
GGTTCGAACCATTTAGCCAG+TGG | + | chr4_2:36595658-36595677 | Msa0598860:intron | 50.0% | |
TCGAACCATTTAGCCAGTGG+CGG | + | chr4_2:36595661-36595680 | Msa0598860:intron | 50.0% | |
!! | AATAATTCTGGCTCCGCCAC+TGG | - | chr4_2:36595677-36595696 | None:intergenic | 50.0% |
AAAAAATTGGACCGGAGCCC+AGG | + | chr4_2:36595843-36595862 | Msa0598860:intron | 50.0% | |
! | TAAAGGCAGGGGTGGTTCTA+AGG | - | chr4_2:36595890-36595909 | None:intergenic | 50.0% |
GAGCAAAAGGCTAAAGGCAG+GGG | - | chr4_2:36595901-36595920 | None:intergenic | 50.0% | |
ACACACAGCTGCAAGGTCTT+GGG | + | chr4_2:36596106-36596125 | Msa0598860:intron | 50.0% | |
CTGTAGTGAAGGAGCAATGG+AGG | + | chr4_2:36596326-36596345 | Msa0598860:intron | 50.0% | |
TAGTGAAGGAGCAATGGAGG+AGG | + | chr4_2:36596329-36596348 | Msa0598860:intron | 50.0% | |
GGAAGCGAGTGATTCGTGTT+TGG | - | chr4_2:36595249-36595268 | None:intergenic | 50.0% | |
GGTTCGAACCATTTAGCCAG+TGG | + | chr4_2:36595658-36595677 | Msa0598860:intron | 50.0% | |
TCGAACCATTTAGCCAGTGG+CGG | + | chr4_2:36595661-36595680 | Msa0598860:intron | 50.0% | |
!! | AATAATTCTGGCTCCGCCAC+TGG | - | chr4_2:36595677-36595696 | None:intergenic | 50.0% |
AAAAAATTGGACCGGAGCCC+AGG | + | chr4_2:36595843-36595862 | Msa0598860:intron | 50.0% | |
! | TAAAGGCAGGGGTGGTTCTA+AGG | - | chr4_2:36595890-36595909 | None:intergenic | 50.0% |
GAGCAAAAGGCTAAAGGCAG+GGG | - | chr4_2:36595901-36595920 | None:intergenic | 50.0% | |
ACACACAGCTGCAAGGTCTT+GGG | + | chr4_2:36596106-36596125 | Msa0598860:intron | 50.0% | |
CTGTAGTGAAGGAGCAATGG+AGG | + | chr4_2:36596326-36596345 | Msa0598860:intron | 50.0% | |
TAGTGAAGGAGCAATGGAGG+AGG | + | chr4_2:36596329-36596348 | Msa0598860:intron | 50.0% | |
GCTTACTCACGCACGAGTGA+TGG | + | chr4_2:36595142-36595161 | Msa0598860:exon | 55.0% | |
CGCACGAGTGATGGCAAATG+TGG | + | chr4_2:36595151-36595170 | Msa0598860:exon | 55.0% | |
CACGTTGATGCCCAACTTGC+AGG | + | chr4_2:36595317-36595336 | Msa0598860:CDS | 55.0% | |
GCTTCTATCACCAAGCTCGC+AGG | + | chr4_2:36595374-36595393 | Msa0598860:CDS | 55.0% | |
GGTATGCAGGGTTCGGGATT+CGG | + | chr4_2:36595635-36595654 | Msa0598860:intron | 55.0% | |
GTATGCAGGGTTCGGGATTC+GGG | + | chr4_2:36595636-36595655 | Msa0598860:intron | 55.0% | |
TATGCAGGGTTCGGGATTCG+GGG | + | chr4_2:36595637-36595656 | Msa0598860:intron | 55.0% | |
CAAAAGGCTAAAGGCAGGGG+TGG | - | chr4_2:36595898-36595917 | None:intergenic | 55.0% | |
CACACACAGCTGCAAGGTCT+TGG | + | chr4_2:36596105-36596124 | Msa0598860:intron | 55.0% | |
AAGGAGCAATGGAGGAGGCA+AGG | + | chr4_2:36596334-36596353 | Msa0598860:CDS | 55.0% | |
CAATGGAGGAGGCAAGGACA+TGG | + | chr4_2:36596340-36596359 | Msa0598860:CDS | 55.0% | |
TGCTTCACGTCGATCCGTTG+AGG | + | chr4_2:36596422-36596441 | Msa0598860:CDS | 55.0% | |
TTCAGCGCAGGTGTCCTCAA+CGG | - | chr4_2:36596439-36596458 | None:intergenic | 55.0% | |
GCTTACTCACGCACGAGTGA+TGG | + | chr4_2:36595142-36595161 | Msa0598860:exon | 55.0% | |
CGCACGAGTGATGGCAAATG+TGG | + | chr4_2:36595151-36595170 | Msa0598860:exon | 55.0% | |
CACGTTGATGCCCAACTTGC+AGG | + | chr4_2:36595317-36595336 | Msa0598860:CDS | 55.0% | |
GCTTCTATCACCAAGCTCGC+AGG | + | chr4_2:36595374-36595393 | Msa0598860:CDS | 55.0% | |
GGTATGCAGGGTTCGGGATT+CGG | + | chr4_2:36595635-36595654 | Msa0598860:intron | 55.0% | |
GTATGCAGGGTTCGGGATTC+GGG | + | chr4_2:36595636-36595655 | Msa0598860:intron | 55.0% | |
TATGCAGGGTTCGGGATTCG+GGG | + | chr4_2:36595637-36595656 | Msa0598860:intron | 55.0% | |
CAAAAGGCTAAAGGCAGGGG+TGG | - | chr4_2:36595898-36595917 | None:intergenic | 55.0% | |
CACACACAGCTGCAAGGTCT+TGG | + | chr4_2:36596105-36596124 | Msa0598860:intron | 55.0% | |
AAGGAGCAATGGAGGAGGCA+AGG | + | chr4_2:36596334-36596353 | Msa0598860:CDS | 55.0% | |
CAATGGAGGAGGCAAGGACA+TGG | + | chr4_2:36596340-36596359 | Msa0598860:CDS | 55.0% | |
TGCTTCACGTCGATCCGTTG+AGG | + | chr4_2:36596422-36596441 | Msa0598860:CDS | 55.0% | |
TTCAGCGCAGGTGTCCTCAA+CGG | - | chr4_2:36596439-36596458 | None:intergenic | 55.0% | |
GGAGTTGGAACCTGCGAGCT+TGG | - | chr4_2:36595387-36595406 | None:intergenic | 60.0% | |
! | TGGCTCCGCCACTGGCTAAA+TGG | - | chr4_2:36595669-36595688 | None:intergenic | 60.0% |
GAGGAGGCAAGGACATGGAG+AGG | + | chr4_2:36596345-36596364 | Msa0598860:CDS | 60.0% | |
GGAGTTGGAACCTGCGAGCT+TGG | - | chr4_2:36595387-36595406 | None:intergenic | 60.0% | |
! | TGGCTCCGCCACTGGCTAAA+TGG | - | chr4_2:36595669-36595688 | None:intergenic | 60.0% |
GAGGAGGCAAGGACATGGAG+AGG | + | chr4_2:36596345-36596364 | Msa0598860:CDS | 60.0% | |
!! | TTCTAAGGCCCGGCGAGCCT+GGG | - | chr4_2:36595875-36595894 | None:intergenic | 65.0% |
!! | GCAGGGGTGGTTCTAAGGCC+CGG | - | chr4_2:36595885-36595904 | None:intergenic | 65.0% |
!! | TTCTAAGGCCCGGCGAGCCT+GGG | - | chr4_2:36595875-36595894 | None:intergenic | 65.0% |
!! | GCAGGGGTGGTTCTAAGGCC+CGG | - | chr4_2:36595885-36595904 | None:intergenic | 65.0% |
CTGGGCAGTTGCCTGGGCTC+CGG | - | chr4_2:36595857-36595876 | None:intergenic | 70.0% | |
GCGAGCCTGGGCAGTTGCCT+GGG | - | chr4_2:36595863-36595882 | None:intergenic | 70.0% | |
AGGCAACTGCCCAGGCTCGC+CGG | + | chr4_2:36595863-36595882 | Msa0598860:intron | 70.0% | |
!! | GTTCTAAGGCCCGGCGAGCC+TGG | - | chr4_2:36595876-36595895 | None:intergenic | 70.0% |
CTGGGCAGTTGCCTGGGCTC+CGG | - | chr4_2:36595857-36595876 | None:intergenic | 70.0% | |
GCGAGCCTGGGCAGTTGCCT+GGG | - | chr4_2:36595863-36595882 | None:intergenic | 70.0% | |
AGGCAACTGCCCAGGCTCGC+CGG | + | chr4_2:36595863-36595882 | Msa0598860:intron | 70.0% | |
!! | GTTCTAAGGCCCGGCGAGCC+TGG | - | chr4_2:36595876-36595895 | None:intergenic | 70.0% |
CGGAGCCCAGGCAACTGCCC+AGG | + | chr4_2:36595855-36595874 | Msa0598860:intron | 75.0% | |
GGCGAGCCTGGGCAGTTGCC+TGG | - | chr4_2:36595864-36595883 | None:intergenic | 75.0% | |
GGCAACTGCCCAGGCTCGCC+GGG | + | chr4_2:36595864-36595883 | Msa0598860:intron | 75.0% | |
CGGAGCCCAGGCAACTGCCC+AGG | + | chr4_2:36595855-36595874 | Msa0598860:intron | 75.0% | |
GGCGAGCCTGGGCAGTTGCC+TGG | - | chr4_2:36595864-36595883 | None:intergenic | 75.0% | |
GGCAACTGCCCAGGCTCGCC+GGG | + | chr4_2:36595864-36595883 | Msa0598860:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 36595031 | 36596745 | 36595031 | ID=Msa0598860;Name=Msa0598860 |
chr4_2 | mRNA | 36595031 | 36596745 | 36595031 | ID=Msa0598860-mRNA-1;Parent=Msa0598860;Name=Msa0598860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=130|1|1|1|1|1|2|184|154 |
chr4_2 | exon | 36595031 | 36595395 | 36595031 | ID=Msa0598860-mRNA-1:exon:8291;Parent=Msa0598860-mRNA-1 |
chr4_2 | exon | 36596332 | 36596745 | 36596332 | ID=Msa0598860-mRNA-1:exon:8292;Parent=Msa0598860-mRNA-1 |
chr4_2 | five_prime_UTR | 36595031 | 36595160 | 36595031 | ID=Msa0598860-mRNA-1:five_prime_utr;Parent=Msa0598860-mRNA-1 |
chr4_2 | CDS | 36595161 | 36595395 | 36595161 | ID=Msa0598860-mRNA-1:cds;Parent=Msa0598860-mRNA-1 |
chr4_2 | CDS | 36596332 | 36596561 | 36596332 | ID=Msa0598860-mRNA-1:cds;Parent=Msa0598860-mRNA-1 |
chr4_2 | three_prime_UTR | 36596562 | 36596745 | 36596562 | ID=Msa0598860-mRNA-1:three_prime_utr;Parent=Msa0598860-mRNA-1 |
Gene Sequence |
Protein sequence |