AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0426730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426730 MtrunA17_Chr3g0128891 97.122 417 12 0 1 417 1 417 0.0 845
Msa0426730 MtrunA17_Chr6g0455421 26.346 353 220 12 74 402 210 546 1.14e-21 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426730 AT3G56330.1 63.476 397 143 1 18 412 35 431 0.0 540
Msa0426730 AT5G15810.1 24.419 344 236 8 74 401 123 458 3.66e-19 90.1
Msa0426730 AT3G02320.1 24.324 370 248 10 52 401 101 458 4.04e-17 84.0

Find 145 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGTTCTTTAGCTGCTTA+TGG 0.167466 3_2:-77319136 Msa0426730:intron
GCTATCATTACTTTGAAATT+TGG 0.203394 3_2:-77320021 Msa0426730:CDS
AAATCAATACTCCACCTCTT+AGG 0.208380 3_2:-77317324 Msa0426730:CDS
AGGGGACATACTTCATATTT+TGG 0.210714 3_2:-77316518 Msa0426730:three_prime_UTR
TCAACTGATGGTTTCTCTTC+TGG 0.214021 3_2:-77319979 Msa0426730:CDS
TGCCGGTATCTGTCTCTTAA+TGG 0.225155 3_2:-77316680 Msa0426730:exon
TTCATTGATGTTGACTCTTT+TGG 0.235166 3_2:-77320069 Msa0426730:CDS
TGTCAGGGAGGCTGCATTGT+TGG 0.250036 3_2:-77319050 Msa0426730:CDS
GTCAGGGAGGCTGCATTGTT+GGG 0.255296 3_2:-77319049 Msa0426730:CDS
TGCTTATAGGCGGGGTTGTC+AGG 0.255906 3_2:-77319066 Msa0426730:CDS
TTTCTTTCTTCATCAGTCTA+AGG 0.257474 3_2:-77320591 Msa0426730:five_prime_UTR
ATTTCTAATGGAGGCTTCTT+TGG 0.267322 3_2:-77316370 Msa0426730:three_prime_UTR
ACCTTATATAATCCCATAAA+AGG 0.272404 3_2:-77320785 Msa0426730:five_prime_UTR
ATTGGTTTGCGAATGCTTAT+AGG 0.273451 3_2:-77319079 Msa0426730:CDS
TGTGATTGCTGTAGACATTA+TGG 0.290218 3_2:-77318846 Msa0426730:intron
TTCTCAAACGGAACGTGGTT+TGG 0.290253 3_2:-77320418 Msa0426730:CDS
AGGCTGATGTTGATATAAAT+AGG 0.313209 3_2:-77316542 Msa0426730:three_prime_UTR
GTGACCCCAGGTTGCCATTT+GGG 0.321091 3_2:-77317471 Msa0426730:CDS
TCAGACTCGCTTAAGGTATC+AGG 0.326059 3_2:-77317628 Msa0426730:CDS
GGAGAATTTGAGTCGGGTTT+CGG 0.326905 3_2:-77320178 Msa0426730:CDS
TATTTAATCATTCATTTCTC+TGG 0.345554 3_2:-77316423 Msa0426730:three_prime_UTR
TTGATGCACTTTGTGGTTGC+GGG 0.347797 3_2:-77320287 Msa0426730:CDS
TCCGTTTGAGAAACGTTTCC+AGG 0.355207 3_2:+77320429 None:intergenic
TTAAGGTATCAGGACCTCTT+TGG 0.359066 3_2:-77317618 Msa0426730:CDS
ATCTCGTTTGAATATGTCAT+AGG 0.371894 3_2:+77319100 None:intergenic
CGATGTTGTTGTCTTTGTCT+TGG 0.377343 3_2:-77320515 Msa0426730:CDS
GTATCTGTCTCTTAATGGTT+TGG 0.380877 3_2:-77316675 Msa0426730:exon
CTTAATGGTTTGGCCTCTAA+AGG 0.384391 3_2:-77316665 Msa0426730:exon
ATTCTCCGCAGAAGCATTCT+CGG 0.385655 3_2:-77320473 Msa0426730:CDS
GTCCGGTGGCGCTTTCTTGA+CGG 0.386557 3_2:+77320370 None:intergenic
TCTAAATTATGCATTTCTAA+TGG 0.390006 3_2:-77316382 Msa0426730:three_prime_UTR
ATGCTCAGAGGAACCTTTAG+AGG 0.391287 3_2:+77316652 None:intergenic
ATGACATATTCAAACGAGAT+TGG 0.394373 3_2:-77319097 Msa0426730:CDS
TGCAGCTTCCTTGCAGAAGA+AGG 0.398526 3_2:-77320331 Msa0426730:CDS
CTGAGCAAGACCCGGAAAAC+AGG 0.402440 3_2:+77318983 None:intergenic
CGTGTTCTTGATGCACTTTG+TGG 0.405770 3_2:-77320294 Msa0426730:CDS
CACTTTGTGGTTGCGGGATA+CGG 0.407311 3_2:-77320281 Msa0426730:CDS
AATCAATACTCCACCTCTTA+GGG 0.418319 3_2:-77317323 Msa0426730:CDS
CCAGGTTTCAGACTCGCTTA+AGG 0.425418 3_2:-77317635 Msa0426730:intron
TTCTTTCTTCATCAGTCTAA+GGG 0.428406 3_2:-77320590 Msa0426730:five_prime_UTR
TTAATGTTCACATGAGTTGA+AGG 0.430280 3_2:-77316626 Msa0426730:three_prime_UTR
CTTTATGTCACTTCAACTGA+TGG 0.431973 3_2:-77319991 Msa0426730:CDS
TCCTTGCAGAAGAAGGCTAA+TGG 0.432598 3_2:-77320324 Msa0426730:CDS
GATATACCCAAATGGCAACC+TGG 0.432960 3_2:+77317465 None:intergenic
TCCTGGAAACGTTTCTCAAA+CGG 0.434943 3_2:-77320430 Msa0426730:CDS
ACGAAAACAAGGGAGTTATA+TGG 0.435228 3_2:+77319023 None:intergenic
CTTGATGCACTTTGTGGTTG+CGG 0.436079 3_2:-77320288 Msa0426730:CDS
AGTGACCCCAGGTTGCCATT+TGG 0.437494 3_2:-77317472 Msa0426730:CDS
ATCATTACTTTGAAATTTGG+TGG 0.439529 3_2:-77320018 Msa0426730:CDS
GCCAAGCAGTGGGGATGGAT+TGG 0.442704 3_2:-77317547 Msa0426730:CDS
TATAGCTAAAGAACTATTGC+CGG 0.443111 3_2:-77316697 Msa0426730:CDS
AATTGAGGAGAATTTGAGTC+GGG 0.454310 3_2:-77320184 Msa0426730:CDS
TAGTAATAGTGAAGCATTTG+AGG 0.474582 3_2:-77316562 Msa0426730:three_prime_UTR
CTCGTGCAGGGCGCTCATCA+AGG 0.477774 3_2:+77317300 None:intergenic
TCATAGAGTTGCTTTGTGAC+TGG 0.478652 3_2:+77316328 None:intergenic
CGGCGAAAGAAGAGGAAAGA+TGG 0.482786 3_2:-77320158 Msa0426730:CDS
TCATGATGCTGCATATCTTA+CGG 0.488223 3_2:-77317584 Msa0426730:CDS
ACTGATGGTTTCTCTTCTGG+TGG 0.490556 3_2:-77319976 Msa0426730:CDS
TTGTGAGTTAATTAAAATGA+GGG 0.492305 3_2:+77320644 None:intergenic
GTATCAGGACCTCTTTGGAC+AGG 0.504615 3_2:-77317613 Msa0426730:CDS
ATCTGGCCAAGCAGTGGGGA+TGG 0.507155 3_2:-77317552 Msa0426730:CDS
ACGGTCGGCGCGGTATTTGA+AGG 0.509215 3_2:-77320262 Msa0426730:CDS
TTTGTGAGTTAATTAAAATG+AGG 0.510649 3_2:+77320643 None:intergenic
TCTTACGGATATGTTAGATC+TGG 0.511156 3_2:-77317569 Msa0426730:CDS
GCTTATAGGCGGGGTTGTCA+GGG 0.511350 3_2:-77319065 Msa0426730:CDS
CAGCTGAGTGGAATGTCAAA+AGG 0.512417 3_2:+77316455 None:intergenic
TGATGTTGATATAAATAGGA+AGG 0.520359 3_2:-77316538 Msa0426730:three_prime_UTR
TGGGGATGGATTGGTTGTGA+TGG 0.523059 3_2:-77317538 Msa0426730:CDS
AGCGCCACCGGACGTGACCT+CGG 0.524212 3_2:-77320360 Msa0426730:CDS
TCAGGGAGGCTGCATTGTTG+GGG 0.525127 3_2:-77319048 Msa0426730:CDS
GTTTCTCTTCTGGTGGACAC+AGG 0.525712 3_2:-77319969 Msa0426730:CDS
TAGAAACCTTGTTGCAATGT+GGG 0.526171 3_2:+77320864 Msa0426740:five_prime_UTR
ACCAATCCATCCCCACTGCT+TGG 0.526173 3_2:+77317546 None:intergenic
GTTTGCGAATGCTTATAGGC+GGG 0.526475 3_2:-77319075 Msa0426730:CDS
GAATGCTTCTGCGGAGAATG+AGG 0.527706 3_2:+77320477 None:intergenic
AAGAACTCCGAGGTCACGTC+CGG 0.529717 3_2:+77320353 None:intergenic
GCCATTTGGGTATATCAAGT+TGG 0.531607 3_2:-77317458 Msa0426730:CDS
AATGATGGAAATGAGAGCTA+TGG 0.531886 3_2:-77320213 Msa0426730:CDS
AATTTCCACACTGGTCGCAT+TGG 0.532664 3_2:+77318814 None:intergenic
GTTGGTCCCAAGAAAACTCA+TGG 0.536292 3_2:+77318790 None:intergenic
GTTAGATCTGGCCAAGCAGT+GGG 0.541656 3_2:-77317557 Msa0426730:CDS
TCTTGCTCAGATTGAATCGC+GGG 0.544510 3_2:-77318970 Msa0426730:CDS
AGAAGGGTTATGCTGCGAGC+AGG 0.547371 3_2:-77316776 Msa0426730:CDS
GCGCTCATCAAGGCCCTAAG+AGG 0.548089 3_2:+77317310 None:intergenic
AACTCACAAAACACGTGTAA+CGG 0.548624 3_2:-77320630 Msa0426730:five_prime_UTR
ATATACCCAAATGGCAACCT+GGG 0.548650 3_2:+77317466 None:intergenic
GCGGGAAGCTTCATGATAGT+AGG 0.550760 3_2:-77318952 Msa0426730:intron
CTTGATGAGCGCCCTGCACG+AGG 0.550935 3_2:-77317299 Msa0426730:intron
AAATTATGCATTTCTAATGG+AGG 0.551504 3_2:-77316379 Msa0426730:three_prime_UTR
AACGTTTCTCAAACGGAACG+TGG 0.551995 3_2:-77320423 Msa0426730:CDS
TCCAACTTGATATACCCAAA+TGG 0.552417 3_2:+77317457 None:intergenic
TGGGTATATCAAGTTGGATG+AGG 0.554171 3_2:-77317452 Msa0426730:intron
TTGTGGTTGCGGGATACGGT+CGG 0.555656 3_2:-77320277 Msa0426730:CDS
TACCGTCAAGAAAGCGCCAC+CGG 0.558477 3_2:-77320372 Msa0426730:CDS
TCCATTAGCCTTCTTCTGCA+AGG 0.561512 3_2:+77320323 None:intergenic
TCGGGTTTCGGCGAAAGAAG+AGG 0.562272 3_2:-77320166 Msa0426730:CDS
TCTCGTTTGAATATGTCATA+GGG 0.566934 3_2:+77319101 None:intergenic
TGAAAAGCTTATAAAACAGA+TGG 0.567081 3_2:-77317503 Msa0426730:CDS
CTCATCAAGGCCCTAAGAGG+TGG 0.569465 3_2:+77317313 None:intergenic
GGTTTGCGAATGCTTATAGG+CGG 0.570509 3_2:-77319076 Msa0426730:CDS
TTGCTCCTGCAGTGTGTCAA+AGG 0.578026 3_2:-77318754 Msa0426730:intron
AACCATTAAGAGACAGATAC+CGG 0.579125 3_2:+77316678 None:intergenic
GAGCTATGGAAGGATAATTG+AGG 0.582471 3_2:-77320199 Msa0426730:CDS
AACTCCGAGGTCACGTCCGG+TGG 0.582476 3_2:+77320356 None:intergenic
ATGAAGTTGTTGATCATGCA+AGG 0.583096 3_2:-77316492 Msa0426730:three_prime_UTR
CTAGAAACCTTGTTGCAATG+TGG 0.583412 3_2:+77320863 None:intergenic
TGTTAGATCTGGCCAAGCAG+TGG 0.583759 3_2:-77317558 Msa0426730:CDS
AAAGCTTATAAAACAGATGG+TGG 0.586301 3_2:-77317500 Msa0426730:CDS
TTTGCGAATGCTTATAGGCG+GGG 0.586700 3_2:-77319074 Msa0426730:CDS
GATGTTGATATAAATAGGAA+GGG 0.593384 3_2:-77316537 Msa0426730:three_prime_UTR
TATAGGCGGGGTTGTCAGGG+AGG 0.594149 3_2:-77319062 Msa0426730:CDS
GGCGAAAGAAGAGGAAAGAT+GGG 0.603219 3_2:-77320157 Msa0426730:CDS
CCATACCTTTGACACACTGC+AGG 0.605142 3_2:+77318749 None:intergenic
TATACTAATGAATTCTGTCA+TGG 0.605433 3_2:+77316716 None:intergenic
AGATATGCAGCATCATGAAG+AGG 0.611576 3_2:+77317589 None:intergenic
GATTCAATCTGAGCAAGACC+CGG 0.614625 3_2:+77318975 None:intergenic
AGCAACTCATCTGACCAAGT+TGG 0.616072 3_2:+77318772 None:intergenic
ATGGAAATGAGAGCTATGGA+AGG 0.618281 3_2:-77320209 Msa0426730:CDS
TCTTTCTTCATCAGTCTAAG+GGG 0.619065 3_2:-77320589 Msa0426730:five_prime_UTR
TAATTGAGGAGAATTTGAGT+CGG 0.619319 3_2:-77320185 Msa0426730:CDS
TTGACGGTAAAATGCACCGC+CGG 0.623040 3_2:+77320386 None:intergenic
AGAAACCTTGTTGCAATGTG+GGG 0.624081 3_2:+77320865 Msa0426740:five_prime_UTR
GAACAGCATTCTTACTGATG+AGG 0.626718 3_2:+77319946 None:intergenic
TATCAGGACCTCTTTGGACA+GGG 0.628853 3_2:-77317612 Msa0426730:CDS
TGGTGGATGAAAGTGACCCC+AGG 0.634109 3_2:-77317483 Msa0426730:CDS
CGTGGTTTGGAATTCAACAC+CGG 0.634880 3_2:-77320405 Msa0426730:CDS
ATGTTGATATAAATAGGAAG+GGG 0.634964 3_2:-77316536 Msa0426730:three_prime_UTR
CAAGACAAAGACAACAACAT+CGG 0.636852 3_2:+77320516 None:intergenic
GTGGGCCCCACATTGCAACA+AGG 0.644552 3_2:-77320870 None:intergenic
TTGGTCCCAAGAAAACTCAT+GGG 0.648179 3_2:+77318791 None:intergenic
TGAAGAGGCCCTGTCCAAAG+AGG 0.649312 3_2:+77317604 None:intergenic
ATAAGCATAGTACGAAAACA+AGG 0.651215 3_2:+77319012 None:intergenic
GTCTTGCTCAGATTGAATCG+CGG 0.662940 3_2:-77318971 Msa0426730:CDS
TGACACCGAGAATGCTTCTG+CGG 0.667816 3_2:+77320468 None:intergenic
ATTGGCCAATGCGACCAGTG+TGG 0.674765 3_2:-77318819 Msa0426730:CDS
ATAATGCATGACCAGCTGAG+TGG 0.686765 3_2:+77316443 None:intergenic
GGTTTGGAATTCAACACCGG+CGG 0.687116 3_2:-77320402 Msa0426730:CDS
ACTCATGGGAATTTCCACAC+TGG 0.697108 3_2:+77318805 None:intergenic
GAACATTAACAAATGCTCAG+AGG 0.703894 3_2:+77316640 None:intergenic
TAAGCATAGTACGAAAACAA+GGG 0.714278 3_2:+77319013 None:intergenic
GAAAGAAGAGGAAAGATGGG+TGG 0.716195 3_2:-77320154 Msa0426730:CDS
GTTGCGGGATACGGTCGGCG+CGG 0.719001 3_2:-77320272 Msa0426730:CDS
AGGAAGCTGCAAGAACTCCG+AGG 0.730697 3_2:+77320343 None:intergenic
TATACCCAAATGGCAACCTG+GGG 0.735324 3_2:+77317467 None:intergenic
TTAGATCTGGCCAAGCAGTG+GGG 0.745563 3_2:-77317556 Msa0426730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTGACTATATTTTTTTTAT+TGG - chr3_2:77317898-77317917 Msa0426730:intron 15.0%
!!! CTATTTTAAAATTGTGTTAA+AGG - chr3_2:77319989-77320008 Msa0426730:CDS 15.0%
!! TTATGTATGTATAAAAATGA+AGG - chr3_2:77320212-77320231 Msa0426730:CDS 15.0%
!! TATGTATGTATAAAAATGAA+GGG - chr3_2:77320213-77320232 Msa0426730:CDS 15.0%
!!! TTTTTGGATTTTCCTTTTAT+GGG + chr3_2:77316401-77316420 None:intergenic 20.0%
!!! TTTTTTGGATTTTCCTTTTA+TGG + chr3_2:77316402-77316421 None:intergenic 20.0%
!! GAAATTTGAAAAATTGAAGT+GGG + chr3_2:77316464-77316483 None:intergenic 20.0%
!! TGAAATTTGAAAAATTGAAG+TGG + chr3_2:77316465-77316484 None:intergenic 20.0%
!!! TAAAATGAGGGATATTTTTA+CGG + chr3_2:77316518-77316537 None:intergenic 20.0%
!! TTGTGAGTTAATTAAAATGA+GGG + chr3_2:77316530-77316549 None:intergenic 20.0%
!! TTTGTGAGTTAATTAAAATG+AGG + chr3_2:77316531-77316550 None:intergenic 20.0%
!!! AAAATTCAGTTACTTCTTTT+CGG - chr3_2:77316622-77316641 Msa0426730:three_prime_UTR 20.0%
!!! ATCAAACTCATTTTAAAACA+AGG + chr3_2:77317698-77317717 None:intergenic 20.0%
!!! TTTGATTTGTGTAGTTTAAT+AGG - chr3_2:77317928-77317947 Msa0426730:intron 20.0%
!!! GTTTTTTAGTGTTTATTTAC+TGG - chr3_2:77318474-77318493 Msa0426730:intron 20.0%
!! AACAGTTTAAATAGGAATTT+AGG + chr3_2:77318593-77318612 None:intergenic 20.0%
!! AAGTAAAAGAAAATTCAGTA+GGG + chr3_2:77319181-77319200 None:intergenic 20.0%
!! TGAAAAATATGAATCCAAAA+GGG + chr3_2:77319330-77319349 None:intergenic 20.0%
!! ATGAAAAATATGAATCCAAA+AGG + chr3_2:77319331-77319350 None:intergenic 20.0%
!!! AGAGTATTTTATACAATCAT+AGG + chr3_2:77319501-77319520 None:intergenic 20.0%
!!! ACTCTAAAAGTTCTTTAATT+TGG - chr3_2:77319896-77319915 Msa0426730:intron 20.0%
!! TAAAAGAATCAAAGTCATAA+TGG - chr3_2:77319919-77319938 Msa0426730:intron 20.0%
!! AATTGCATTTAGATATGATT+AGG - chr3_2:77320127-77320146 Msa0426730:CDS 20.0%
!!! ATTTGTTTTAATTGCATTTG+CGG + chr3_2:77320431-77320450 None:intergenic 20.0%
!! TATTTAATCATTCATTTCTC+TGG - chr3_2:77320748-77320767 Msa0426730:five_prime_UTR 20.0%
!! TCTAAATTATGCATTTCTAA+TGG - chr3_2:77320789-77320808 Msa0426730:five_prime_UTR 20.0%
! ACCTTATATAATCCCATAAA+AGG - chr3_2:77316386-77316405 Msa0426730:three_prime_UTR 25.0%
!! TCCTTTTATGGGATTATATA+AGG + chr3_2:77316390-77316409 None:intergenic 25.0%
!!! TTCGTTCTTATCTTGTTTTT+TGG + chr3_2:77316417-77316436 None:intergenic 25.0%
!!! GCTATCATTACTTTGAAATT+TGG - chr3_2:77317150-77317169 Msa0426730:intron 25.0%
!!! ATCATTACTTTGAAATTTGG+TGG - chr3_2:77317153-77317172 Msa0426730:intron 25.0%
! TCTGATTTCATAATCTATCT+TGG + chr3_2:77317451-77317470 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+TGG - chr3_2:77317584-77317603 Msa0426730:CDS 25.0%
! ATAAGTTGTTTATCCAAACT+GGG - chr3_2:77317585-77317604 Msa0426730:CDS 25.0%
!!! TTTGTGTAGTGTAATTTGTT+TGG - chr3_2:77317734-77317753 Msa0426730:intron 25.0%
!!! TTGTATACTGTAATGGATTT+AGG - chr3_2:77317974-77317993 Msa0426730:intron 25.0%
! AATCAAATGAAAACAACACA+AGG + chr3_2:77318271-77318290 None:intergenic 25.0%
!!! TGTAGACATTATGGTTTTAT+TGG - chr3_2:77318334-77318353 Msa0426730:intron 25.0%
! ATTGCTAGATAATAACTTCT+CGG - chr3_2:77318538-77318557 Msa0426730:intron 25.0%
! AAGTAAAAGCAAATTCAGTA+GGG + chr3_2:77318666-77318685 None:intergenic 25.0%
! TTACCAAGTAAAAGCAAATT+CGG + chr3_2:77318671-77318690 None:intergenic 25.0%
! AAGTAAAAGCAAATTCAGTA+GGG + chr3_2:77318666-77318685 None:intergenic 25.0%
! AAGTAAAAGCAAATTCAGTA+GGG + chr3_2:77318666-77318685 None:intergenic 25.0%
! AAGTAAAAGCAAATTCAGTA+GGG + chr3_2:77318666-77318685 None:intergenic 25.0%
! CAAGTAAAAGAAAATTCAGT+AGG + chr3_2:77319182-77319201 None:intergenic 25.0%
!! CTACTGAATTTTCTTTTACT+TGG - chr3_2:77319180-77319199 Msa0426730:intron 25.0%
!! TTTTTCCAGAGTTCAAATTA+CGG - chr3_2:77319461-77319480 Msa0426730:intron 25.0%
!!! TCTATTTCTTTTCATTTTCC+AGG - chr3_2:77319518-77319537 Msa0426730:intron 25.0%
! TGAAAAGCTTATAAAACAGA+TGG - chr3_2:77319668-77319687 Msa0426730:intron 25.0%
!! TTTATTTGTACTTTTCCAGA+TGG - chr3_2:77319812-77319831 Msa0426730:intron 25.0%
! AAATTGTGTTAAAGGATCAT+CGG - chr3_2:77319997-77320016 Msa0426730:CDS 25.0%
! GATATAGATAAGAGAGTAAA+AGG - chr3_2:77320032-77320051 Msa0426730:CDS 25.0%
! TTATACCATAATTGCTTTCA+TGG + chr3_2:77320176-77320195 None:intergenic 25.0%
! ATGACATGATATAGAACAAA+AGG + chr3_2:77320244-77320263 None:intergenic 25.0%
! ACTAAACATGGTAAACAAAT+CGG + chr3_2:77320275-77320294 None:intergenic 25.0%
! ATATCTCATCAAACTAAACA+TGG + chr3_2:77320287-77320306 None:intergenic 25.0%
! TATACTAATGAATTCTGTCA+TGG + chr3_2:77320458-77320477 None:intergenic 25.0%
! TGATGTTGATATAAATAGGA+AGG - chr3_2:77320633-77320652 Msa0426730:five_prime_UTR 25.0%
! GATGTTGATATAAATAGGAA+GGG - chr3_2:77320634-77320653 Msa0426730:five_prime_UTR 25.0%
! ATGTTGATATAAATAGGAAG+GGG - chr3_2:77320635-77320654 Msa0426730:five_prime_UTR 25.0%
! AAATTATGCATTTCTAATGG+AGG - chr3_2:77320792-77320811 Msa0426730:five_prime_UTR 25.0%
!! GGGATATTTTTACGGATTTA+AGG + chr3_2:77316510-77316529 None:intergenic 30.0%
TTTCTTTCTTCATCAGTCTA+AGG - chr3_2:77316580-77316599 Msa0426730:three_prime_UTR 30.0%
TTCTTTCTTCATCAGTCTAA+GGG - chr3_2:77316581-77316600 Msa0426730:three_prime_UTR 30.0%
! CAATGTTGTAATTTTGTTCC+TGG - chr3_2:77316724-77316743 Msa0426730:CDS 30.0%
!! GATTTTGTTGTAGCTAATGA+TGG - chr3_2:77316943-77316962 Msa0426730:intron 30.0%
TAATTGAGGAGAATTTGAGT+CGG - chr3_2:77316986-77317005 Msa0426730:intron 30.0%
!!! TTCATTGATGTTGACTCTTT+TGG - chr3_2:77317102-77317121 Msa0426730:intron 30.0%
TGTGATGTAAATTACTGTAG+TGG - chr3_2:77317280-77317299 Msa0426730:intron 30.0%
AAACAGTCTCACAAAACATA+TGG + chr3_2:77317362-77317381 None:intergenic 30.0%
! TATGTTTTGTGAGACTGTTT+TGG - chr3_2:77317362-77317381 Msa0426730:intron 30.0%
TAAGTTGTTTATCCAAACTG+GGG - chr3_2:77317586-77317605 Msa0426730:CDS 30.0%
ATATGACTTCAATTGTGTTG+TGG - chr3_2:77317622-77317641 Msa0426730:CDS 30.0%
TCTGATTATGAGAATTGTGA+TGG - chr3_2:77317757-77317776 Msa0426730:intron 30.0%
!!! TGATGGAGTATTTTAATTGC+TGG - chr3_2:77317774-77317793 Msa0426730:intron 30.0%
!!! ACCACAAGGGTTTTAAAATA+CGG + chr3_2:77317874-77317893 None:intergenic 30.0%
TCTTGTGTTGTATACTGTAA+TGG - chr3_2:77317967-77317986 Msa0426730:intron 30.0%
!! TTTAGTTCTTTAGCTGCTTA+TGG - chr3_2:77318035-77318054 Msa0426730:intron 30.0%
TCTCGTTTGAATATGTCATA+GGG + chr3_2:77318073-77318092 None:intergenic 30.0%
ATCTCGTTTGAATATGTCAT+AGG + chr3_2:77318074-77318093 None:intergenic 30.0%
ATGACATATTCAAACGAGAT+TGG - chr3_2:77318074-77318093 Msa0426730:intron 30.0%
TAAGCATAGTACGAAAACAA+GGG + chr3_2:77318161-77318180 None:intergenic 30.0%
ATAAGCATAGTACGAAAACA+AGG + chr3_2:77318162-77318181 None:intergenic 30.0%
! TTTTCGTACTATGCTTATCA+TGG - chr3_2:77318164-77318183 Msa0426730:intron 30.0%
! AAATTCCCATGAGTTTTCTT+GGG - chr3_2:77318375-77318394 Msa0426730:intron 30.0%
TTGTAAGTTGTAACTAGTGT+TGG - chr3_2:77318507-77318526 Msa0426730:intron 30.0%
CAATTAACATACTTGGAAGT+TGG + chr3_2:77318638-77318657 None:intergenic 30.0%
GGAAAAGCAATTAACATACT+TGG + chr3_2:77318645-77318664 None:intergenic 30.0%
CAAGTAAAAGCAAATTCAGT+AGG + chr3_2:77318667-77318686 None:intergenic 30.0%
!! CTACTGAATTTGCTTTTACT+TGG - chr3_2:77318665-77318684 Msa0426730:intron 30.0%
GGAAAAACAATTAACATGCT+TGG + chr3_2:77318748-77318767 None:intergenic 30.0%
AAGTAAAAGCAAATTCGGTA+GGG + chr3_2:77318769-77318788 None:intergenic 30.0%
CAAGTAAAAGCAAATTCAGT+AGG + chr3_2:77318667-77318686 None:intergenic 30.0%
!! CTACTGAATTTGCTTTTACT+TGG - chr3_2:77318665-77318684 Msa0426730:intron 30.0%
CAAGTAAAAGCAAATTCAGT+AGG + chr3_2:77318667-77318686 None:intergenic 30.0%
!! CTACTGAATTTGCTTTTACT+TGG - chr3_2:77318665-77318684 Msa0426730:intron 30.0%
GGAAAAACAATTAACATGCT+TGG + chr3_2:77318748-77318767 None:intergenic 30.0%
CAAGTAAAAGCAAATTCAGT+AGG + chr3_2:77318667-77318686 None:intergenic 30.0%
!! CTACTGAATTTGCTTTTACT+TGG - chr3_2:77318665-77318684 Msa0426730:intron 30.0%
GGAAAAACAATTAACATGCT+TGG + chr3_2:77318748-77318767 None:intergenic 30.0%
AAGTAAAAGCAGATTCAGTA+GGG + chr3_2:77319284-77319303 None:intergenic 30.0%
TATTTCCGTAATTTGAACTC+TGG + chr3_2:77319469-77319488 None:intergenic 30.0%
AAAGCTTATAAAACAGATGG+TGG - chr3_2:77319671-77319690 Msa0426730:intron 30.0%
GTAAATACTGTTAGCTACTT+TGG - chr3_2:77319766-77319785 Msa0426730:intron 30.0%
TTGGTGAGAATATTGAGTTA+TGG - chr3_2:77319785-77319804 Msa0426730:intron 30.0%
TCTGCAATAAACAAAGTACA+AGG + chr3_2:77320378-77320397 None:intergenic 30.0%
! TGTACTTTGTTTATTGCAGA+AGG - chr3_2:77320378-77320397 Msa0426730:CDS 30.0%
! GTACTTTGTTTATTGCAGAA+GGG - chr3_2:77320379-77320398 Msa0426730:CDS 30.0%
TATAGCTAAAGAACTATTGC+CGG - chr3_2:77320474-77320493 Msa0426730:CDS 30.0%
! TTAATGTTCACATGAGTTGA+AGG - chr3_2:77320545-77320564 Msa0426730:five_prime_UTR 30.0%
! TAGTAATAGTGAAGCATTTG+AGG - chr3_2:77320609-77320628 Msa0426730:five_prime_UTR 30.0%
AGGCTGATGTTGATATAAAT+AGG - chr3_2:77320629-77320648 Msa0426730:five_prime_UTR 30.0%
TAGAAACCTTGTTGCAATGT+GGG + chr3_2:77316310-77316329 None:intergenic 35.0%
AACTCACAAAACACGTGTAA+CGG - chr3_2:77316541-77316560 Msa0426730:three_prime_UTR 35.0%
TCTTTCTTCATCAGTCTAAG+GGG - chr3_2:77316582-77316601 Msa0426730:three_prime_UTR 35.0%
CAAGACAAAGACAACAACAT+CGG + chr3_2:77316658-77316677 None:intergenic 35.0%
! AATGATGGAAATGAGAGCTA+TGG - chr3_2:77316958-77316977 Msa0426730:intron 35.0%
AATTGAGGAGAATTTGAGTC+GGG - chr3_2:77316987-77317006 Msa0426730:intron 35.0%
!! GAAGTGATTCTTCGTTTTTG+AGG - chr3_2:77317124-77317143 Msa0426730:intron 35.0%
! CTTTATGTCACTTCAACTGA+TGG - chr3_2:77317180-77317199 Msa0426730:intron 35.0%
!!! GAGTATTTTAATTGCTGGCA+TGG - chr3_2:77317779-77317798 Msa0426730:intron 35.0%
!!! ACCGTATTTTAAAACCCTTG+TGG - chr3_2:77317870-77317889 Msa0426730:intron 35.0%
!! TGTAATGGATTTAGGACCTT+TGG - chr3_2:77317982-77318001 Msa0426730:intron 35.0%
!! ATTGGTTTGCGAATGCTTAT+AGG - chr3_2:77318092-77318111 Msa0426730:intron 35.0%
ACGAAAACAAGGGAGTTATA+TGG + chr3_2:77318151-77318170 None:intergenic 35.0%
AATGTCTACAGCAATCACAA+TGG + chr3_2:77318324-77318343 None:intergenic 35.0%
TGTGATTGCTGTAGACATTA+TGG - chr3_2:77318325-77318344 Msa0426730:intron 35.0%
! GAAATTCCCATGAGTTTTCT+TGG - chr3_2:77318374-77318393 Msa0426730:intron 35.0%
AACACTAAAAAACCTCGATG+AGG + chr3_2:77318467-77318486 None:intergenic 35.0%
CATGCAGCAACAGTTTAAAT+AGG + chr3_2:77318601-77318620 None:intergenic 35.0%
CAATTAACATGCTTGGAAGT+TGG + chr3_2:77318741-77318760 None:intergenic 35.0%
CAAGTAAAAGCAAATTCGGT+AGG + chr3_2:77318770-77318789 None:intergenic 35.0%
!! CTACCGAATTTGCTTTTACT+TGG - chr3_2:77318768-77318787 Msa0426730:CDS 35.0%
GGAAAAGCAATTAACATGCT+TGG + chr3_2:77318851-77318870 None:intergenic 35.0%
GGAAAAGCAATTAACATGCT+TGG + chr3_2:77318851-77318870 None:intergenic 35.0%
CAATTAACATGCTTGGAAGT+TGG + chr3_2:77318741-77318760 None:intergenic 35.0%
GGAAAAGCAATTAACATGCT+TGG + chr3_2:77318851-77318870 None:intergenic 35.0%
CAAGTAAAAGCAGATTCAGT+AGG + chr3_2:77319285-77319304 None:intergenic 35.0%
!! CTACTGAATCTGCTTTTACT+TGG - chr3_2:77319283-77319302 Msa0426730:intron 35.0%
! AAGTTAACGAATCACCCTTT+TGG - chr3_2:77319313-77319332 Msa0426730:intron 35.0%
TCATGATGCTGCATATCTTA+CGG - chr3_2:77319587-77319606 Msa0426730:intron 35.0%
TCTTACGGATATGTTAGATC+TGG - chr3_2:77319602-77319621 Msa0426730:intron 35.0%
TCCAACTTGATATACCCAAA+TGG + chr3_2:77319717-77319736 None:intergenic 35.0%
!!! GTGGAGTATTGATTTTTGCA+CGG + chr3_2:77319842-77319861 None:intergenic 35.0%
AAATCAATACTCCACCTCTT+AGG - chr3_2:77319847-77319866 Msa0426730:intron 35.0%
AATCAATACTCCACCTCTTA+GGG - chr3_2:77319848-77319867 Msa0426730:intron 35.0%
CTCATATGCATCATGAAAAC+TGG - chr3_2:77320061-77320080 Msa0426730:CDS 35.0%
CGGAGAAACTACTAAAGAAT+AGG - chr3_2:77320089-77320108 Msa0426730:CDS 35.0%
CTATGCCATGAAAGCAATTA+TGG - chr3_2:77320168-77320187 Msa0426730:CDS 35.0%
CAAAGTACAAGGTAAGTGAA+TGG + chr3_2:77320367-77320386 None:intergenic 35.0%
AACCATTAAGAGACAGATAC+CGG + chr3_2:77320496-77320515 None:intergenic 35.0%
GTATCTGTCTCTTAATGGTT+TGG - chr3_2:77320496-77320515 Msa0426730:CDS 35.0%
GAACATTAACAAATGCTCAG+AGG + chr3_2:77320534-77320553 None:intergenic 35.0%
! AGGGGACATACTTCATATTT+TGG - chr3_2:77320653-77320672 Msa0426730:five_prime_UTR 35.0%
ATGAAGTTGTTGATCATGCA+AGG - chr3_2:77320679-77320698 Msa0426730:five_prime_UTR 35.0%
ATTTCTAATGGAGGCTTCTT+TGG - chr3_2:77320801-77320820 Msa0426730:five_prime_UTR 35.0%
AGAAACCTTGTTGCAATGTG+GGG + chr3_2:77316309-77316328 None:intergenic 40.0%
CTAGAAACCTTGTTGCAATG+TGG + chr3_2:77316311-77316330 None:intergenic 40.0%
CGATGTTGTTGTCTTTGTCT+TGG - chr3_2:77316656-77316675 Msa0426730:three_prime_UTR 40.0%
TCCTGGAAACGTTTCTCAAA+CGG - chr3_2:77316741-77316760 Msa0426730:CDS 40.0%
ATGGAAATGAGAGCTATGGA+AGG - chr3_2:77316962-77316981 Msa0426730:intron 40.0%
GAGCTATGGAAGGATAATTG+AGG - chr3_2:77316972-77316991 Msa0426730:intron 40.0%
TCAACTGATGGTTTCTCTTC+TGG - chr3_2:77317192-77317211 Msa0426730:intron 40.0%
GAACAGCATTCTTACTGATG+AGG + chr3_2:77317228-77317247 None:intergenic 40.0%
AGTCAATCTAAACATGCCCT+TGG + chr3_2:77317320-77317339 None:intergenic 40.0%
CATAACATTTAGCCCCAGTT+TGG + chr3_2:77317601-77317620 None:intergenic 40.0%
CAAACTGGGGCTAAATGTTA+TGG - chr3_2:77317599-77317618 Msa0426730:CDS 40.0%
TGAAACAAATGCTGCAGATG+TGG - chr3_2:77317812-77317831 Msa0426730:intron 40.0%
ATAGTCACAGTACACCACAA+GGG + chr3_2:77317887-77317906 None:intergenic 40.0%
TATAGTCACAGTACACCACA+AGG + chr3_2:77317888-77317907 None:intergenic 40.0%
! ATGGATTTAGGACCTTTGGT+TGG - chr3_2:77317986-77318005 Msa0426730:intron 40.0%
AGTTACAAACCACCAACCAA+AGG + chr3_2:77318001-77318020 None:intergenic 40.0%
! CTTATCATGGACCTGTTTTC+CGG - chr3_2:77318177-77318196 Msa0426730:intron 40.0%
! TTATCATGGACCTGTTTTCC+GGG - chr3_2:77318178-77318197 Msa0426730:intron 40.0%
CAAGGCATGTCACAAACATA+AGG + chr3_2:77318253-77318272 None:intergenic 40.0%
TTGGTCCCAAGAAAACTCAT+GGG + chr3_2:77318383-77318402 None:intergenic 40.0%
! TGTTTGAGATTACCTCATCG+AGG - chr3_2:77318452-77318471 Msa0426730:intron 40.0%
AACTGTTGCTGCATGAAACA+TGG - chr3_2:77318606-77318625 Msa0426730:intron 40.0%
ATCATGTTTCATGCAGCAAC+AGG + chr3_2:77318816-77318835 None:intergenic 40.0%
! TTAAGGTATCAGGACCTCTT+TGG - chr3_2:77319553-77319572 Msa0426730:intron 40.0%
AGATATGCAGCATCATGAAG+AGG + chr3_2:77319585-77319604 None:intergenic 40.0%
ATATACCCAAATGGCAACCT+GGG + chr3_2:77319708-77319727 None:intergenic 40.0%
GCCATTTGGGTATATCAAGT+TGG - chr3_2:77319713-77319732 Msa0426730:intron 40.0%
!! TGGGTATATCAAGTTGGATG+AGG - chr3_2:77319719-77319738 Msa0426730:intron 40.0%
CATCATGAAAACTGGCAGTT+CGG - chr3_2:77320069-77320088 Msa0426730:CDS 40.0%
GTACAAGGTAAGTGAATGGT+TGG + chr3_2:77320363-77320382 None:intergenic 40.0%
! CTTAATGGTTTGGCCTCTAA+AGG - chr3_2:77320506-77320525 Msa0426730:CDS 40.0%
! TCATAGAGTTGCTTTGTGAC+TGG + chr3_2:77320846-77320865 None:intergenic 40.0%
!! ATTCTCCGCAGAAGCATTCT+CGG - chr3_2:77316698-77316717 Msa0426730:CDS 45.0%
TCCGTTTGAGAAACGTTTCC+AGG + chr3_2:77316745-77316764 None:intergenic 45.0%
AACGTTTCTCAAACGGAACG+TGG - chr3_2:77316748-77316767 Msa0426730:CDS 45.0%
TTCTCAAACGGAACGTGGTT+TGG - chr3_2:77316753-77316772 Msa0426730:CDS 45.0%
! CGTGGTTTGGAATTCAACAC+CGG - chr3_2:77316766-77316785 Msa0426730:CDS 45.0%
TCCTTGCAGAAGAAGGCTAA+TGG - chr3_2:77316847-77316866 Msa0426730:intron 45.0%
!! TCCATTAGCCTTCTTCTGCA+AGG + chr3_2:77316851-77316870 None:intergenic 45.0%
CGTGTTCTTGATGCACTTTG+TGG - chr3_2:77316877-77316896 Msa0426730:intron 45.0%
CTTGATGCACTTTGTGGTTG+CGG - chr3_2:77316883-77316902 Msa0426730:intron 45.0%
TTGATGCACTTTGTGGTTGC+GGG - chr3_2:77316884-77316903 Msa0426730:intron 45.0%
GGAGAATTTGAGTCGGGTTT+CGG - chr3_2:77316993-77317012 Msa0426730:intron 45.0%
GGCGAAAGAAGAGGAAAGAT+GGG - chr3_2:77317014-77317033 Msa0426730:intron 45.0%
GAAAGAAGAGGAAAGATGGG+TGG - chr3_2:77317017-77317036 Msa0426730:intron 45.0%
ACTGATGGTTTCTCTTCTGG+TGG - chr3_2:77317195-77317214 Msa0426730:intron 45.0%
TGGTCACAGTCATCATACCA+AGG - chr3_2:77317300-77317319 Msa0426730:CDS 45.0%
GGTCACAGTCATCATACCAA+GGG - chr3_2:77317301-77317320 Msa0426730:CDS 45.0%
GAAACCCTGATGTTGTTGTC+TGG - chr3_2:77317659-77317678 Msa0426730:intron 45.0%
GCAACCAGACAACAACATCA+GGG + chr3_2:77317666-77317685 None:intergenic 45.0%
TGCAACCAGACAACAACATC+AGG + chr3_2:77317667-77317686 None:intergenic 45.0%
! GATTTAGGACCTTTGGTTGG+TGG - chr3_2:77317989-77318008 Msa0426730:intron 45.0%
GGTTTGCGAATGCTTATAGG+CGG - chr3_2:77318095-77318114 Msa0426730:intron 45.0%
GTTTGCGAATGCTTATAGGC+GGG - chr3_2:77318096-77318115 Msa0426730:intron 45.0%
TTTGCGAATGCTTATAGGCG+GGG - chr3_2:77318097-77318116 Msa0426730:intron 45.0%
GATTCAATCTGAGCAAGACC+CGG + chr3_2:77318199-77318218 None:intergenic 45.0%
GTCTTGCTCAGATTGAATCG+CGG - chr3_2:77318200-77318219 Msa0426730:intron 45.0%
TCTTGCTCAGATTGAATCGC+GGG - chr3_2:77318201-77318220 Msa0426730:intron 45.0%
AATTTCCACACTGGTCGCAT+TGG + chr3_2:77318360-77318379 None:intergenic 45.0%
ACTCATGGGAATTTCCACAC+TGG + chr3_2:77318369-77318388 None:intergenic 45.0%
GTTGGTCCCAAGAAAACTCA+TGG + chr3_2:77318384-77318403 None:intergenic 45.0%
! GAGTTTTCTTGGGACCAACT+TGG - chr3_2:77318385-77318404 Msa0426730:intron 45.0%
AGCAACTCATCTGACCAAGT+TGG + chr3_2:77318402-77318421 None:intergenic 45.0%
! AGTGTGTCAAAGGTATGGTG+TGG - chr3_2:77318427-77318446 Msa0426730:intron 45.0%
! TCAGACTCGCTTAAGGTATC+AGG - chr3_2:77319543-77319562 Msa0426730:intron 45.0%
TATCAGGACCTCTTTGGACA+GGG - chr3_2:77319559-77319578 Msa0426730:intron 45.0%
TATACCCAAATGGCAACCTG+GGG + chr3_2:77319707-77319726 None:intergenic 45.0%
GATATACCCAAATGGCAACC+TGG + chr3_2:77319709-77319728 None:intergenic 45.0%
!!! CTTTTAGAGTACCTCGTGCA+GGG + chr3_2:77319886-77319905 None:intergenic 45.0%
!!! ACTTTTAGAGTACCTCGTGC+AGG + chr3_2:77319887-77319906 None:intergenic 45.0%
TGCCGGTATCTGTCTCTTAA+TGG - chr3_2:77320491-77320510 Msa0426730:CDS 45.0%
ATGCTCAGAGGAACCTTTAG+AGG + chr3_2:77320522-77320541 None:intergenic 45.0%
CAGCTGAGTGGAATGTCAAA+AGG + chr3_2:77320719-77320738 None:intergenic 45.0%
! CTTTTGACATTCCACTCAGC+TGG - chr3_2:77320717-77320736 Msa0426730:five_prime_UTR 45.0%
ATAATGCATGACCAGCTGAG+TGG + chr3_2:77320731-77320750 None:intergenic 45.0%
GAATGCTTCTGCGGAGAATG+AGG + chr3_2:77316697-77316716 None:intergenic 50.0%
TGACACCGAGAATGCTTCTG+CGG + chr3_2:77316706-77316725 None:intergenic 50.0%
! GGTTTGGAATTCAACACCGG+CGG - chr3_2:77316769-77316788 Msa0426730:CDS 50.0%
TTGACGGTAAAATGCACCGC+CGG + chr3_2:77316788-77316807 None:intergenic 50.0%
TGCAGCTTCCTTGCAGAAGA+AGG - chr3_2:77316840-77316859 Msa0426730:intron 50.0%
CACTTTGTGGTTGCGGGATA+CGG - chr3_2:77316890-77316909 Msa0426730:intron 50.0%
CGGCGAAAGAAGAGGAAAGA+TGG - chr3_2:77317013-77317032 Msa0426730:intron 50.0%
! GTTTCTCTTCTGGTGGACAC+AGG - chr3_2:77317202-77317221 Msa0426730:intron 50.0%
GCGGGAAGCTTCATGATAGT+AGG - chr3_2:77318219-77318238 Msa0426730:intron 50.0%
TTGCTCCTGCAGTGTGTCAA+AGG - chr3_2:77318417-77318436 Msa0426730:intron 50.0%
CCATACCTTTGACACACTGC+AGG + chr3_2:77318425-77318444 None:intergenic 50.0%
CCTGCAGTGTGTCAAAGGTA+TGG - chr3_2:77318422-77318441 Msa0426730:intron 50.0%
! CCTTAAGCGAGTCTGAAACC+TGG + chr3_2:77319539-77319558 None:intergenic 50.0%
CCAGGTTTCAGACTCGCTTA+AGG - chr3_2:77319536-77319555 Msa0426730:intron 50.0%
GTATCAGGACCTCTTTGGAC+AGG - chr3_2:77319558-77319577 Msa0426730:intron 50.0%
TGTTAGATCTGGCCAAGCAG+TGG - chr3_2:77319613-77319632 Msa0426730:intron 50.0%
GTTAGATCTGGCCAAGCAGT+GGG - chr3_2:77319614-77319633 Msa0426730:intron 50.0%
TTAGATCTGGCCAAGCAGTG+GGG - chr3_2:77319615-77319634 Msa0426730:intron 50.0%
!! TGGGGATGGATTGGTTGTGA+TGG - chr3_2:77319633-77319652 Msa0426730:intron 50.0%
! TTTTTGCACGGCTTGCCATC+TGG + chr3_2:77319830-77319849 None:intergenic 50.0%
!! TACCGTCAAGAAAGCGCCAC+CGG - chr3_2:77316799-77316818 Msa0426730:intron 55.0%
AAGAACTCCGAGGTCACGTC+CGG + chr3_2:77316821-77316840 None:intergenic 55.0%
AGGAAGCTGCAAGAACTCCG+AGG + chr3_2:77316831-77316850 None:intergenic 55.0%
TTGTGGTTGCGGGATACGGT+CGG - chr3_2:77316894-77316913 Msa0426730:intron 55.0%
TCGGGTTTCGGCGAAAGAAG+AGG - chr3_2:77317005-77317024 Msa0426730:intron 55.0%
TGCTTATAGGCGGGGTTGTC+AGG - chr3_2:77318105-77318124 Msa0426730:intron 55.0%
GCTTATAGGCGGGGTTGTCA+GGG - chr3_2:77318106-77318125 Msa0426730:intron 55.0%
TGTCAGGGAGGCTGCATTGT+TGG - chr3_2:77318121-77318140 Msa0426730:intron 55.0%
GTCAGGGAGGCTGCATTGTT+GGG - chr3_2:77318122-77318141 Msa0426730:intron 55.0%
TCAGGGAGGCTGCATTGTTG+GGG - chr3_2:77318123-77318142 Msa0426730:intron 55.0%
CTGAGCAAGACCCGGAAAAC+AGG + chr3_2:77318191-77318210 None:intergenic 55.0%
ATTGGCCAATGCGACCAGTG+TGG - chr3_2:77318352-77318371 Msa0426730:intron 55.0%
TGAAGAGGCCCTGTCCAAAG+AGG + chr3_2:77319570-77319589 None:intergenic 55.0%
ACCAATCCATCCCCACTGCT+TGG + chr3_2:77319628-77319647 None:intergenic 55.0%
! TGGTGGATGAAAGTGACCCC+AGG - chr3_2:77319688-77319707 Msa0426730:intron 55.0%
AGTGACCCCAGGTTGCCATT+TGG - chr3_2:77319699-77319718 Msa0426730:intron 55.0%
! GTGACCCCAGGTTGCCATTT+GGG - chr3_2:77319700-77319719 Msa0426730:intron 55.0%
CTCATCAAGGCCCTAAGAGG+TGG + chr3_2:77319861-77319880 None:intergenic 55.0%
AGAAGGGTTATGCTGCGAGC+AGG - chr3_2:77320395-77320414 Msa0426730:CDS 55.0%
GTCCGGTGGCGCTTTCTTGA+CGG + chr3_2:77316804-77316823 None:intergenic 60.0%
ACGGTCGGCGCGGTATTTGA+AGG - chr3_2:77316909-77316928 Msa0426730:intron 60.0%
TATAGGCGGGGTTGTCAGGG+AGG - chr3_2:77318109-77318128 Msa0426730:intron 60.0%
ATCTGGCCAAGCAGTGGGGA+TGG - chr3_2:77319619-77319638 Msa0426730:intron 60.0%
GCCAAGCAGTGGGGATGGAT+TGG - chr3_2:77319624-77319643 Msa0426730:intron 60.0%
GCGCTCATCAAGGCCCTAAG+AGG + chr3_2:77319864-77319883 None:intergenic 60.0%
AACTCCGAGGTCACGTCCGG+TGG + chr3_2:77316818-77316837 None:intergenic 65.0%
! CTCGTGCAGGGCGCTCATCA+AGG + chr3_2:77319874-77319893 None:intergenic 65.0%
CTTGATGAGCGCCCTGCACG+AGG - chr3_2:77319872-77319891 Msa0426730:intron 65.0%
AGCGCCACCGGACGTGACCT+CGG - chr3_2:77316811-77316830 Msa0426730:intron 70.0%
GTTGCGGGATACGGTCGGCG+CGG - chr3_2:77316899-77316918 Msa0426730:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 77316305 77320888 77316305 ID=Msa0426730;Name=Msa0426730
chr3_2 mRNA 77316305 77320888 77316305 ID=Msa0426730-mRNA-1;Parent=Msa0426730;Name=Msa0426730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=353|1|1|1|1|1|6|378|417
chr3_2 exon 77316305 77316796 77316305 ID=Msa0426730-mRNA-1:exon:20147;Parent=Msa0426730-mRNA-1
chr3_2 exon 77317300 77317362 77317300 ID=Msa0426730-mRNA-1:exon:20146;Parent=Msa0426730-mRNA-1
chr3_2 exon 77317453 77317653 77317453 ID=Msa0426730-mRNA-1:exon:20145;Parent=Msa0426730-mRNA-1
chr3_2 exon 77318755 77318854 77318755 ID=Msa0426730-mRNA-1:exon:20144;Parent=Msa0426730-mRNA-1
chr3_2 exon 77318953 77319153 77318953 ID=Msa0426730-mRNA-1:exon:20143;Parent=Msa0426730-mRNA-1
chr3_2 exon 77319961 77320888 77319961 ID=Msa0426730-mRNA-1:exon:20142;Parent=Msa0426730-mRNA-1
chr3_2 five_prime_UTR 77320536 77320888 77320536 ID=Msa0426730-mRNA-1:five_prime_utr;Parent=Msa0426730-mRNA-1
chr3_2 CDS 77319961 77320535 77319961 ID=Msa0426730-mRNA-1:cds;Parent=Msa0426730-mRNA-1
chr3_2 CDS 77318953 77319153 77318953 ID=Msa0426730-mRNA-1:cds;Parent=Msa0426730-mRNA-1
chr3_2 CDS 77318755 77318854 77318755 ID=Msa0426730-mRNA-1:cds;Parent=Msa0426730-mRNA-1
chr3_2 CDS 77317453 77317653 77317453 ID=Msa0426730-mRNA-1:cds;Parent=Msa0426730-mRNA-1
chr3_2 CDS 77317300 77317362 77317300 ID=Msa0426730-mRNA-1:cds;Parent=Msa0426730-mRNA-1
chr3_2 CDS 77316683 77316796 77316683 ID=Msa0426730-mRNA-1:cds;Parent=Msa0426730-mRNA-1
chr3_2 three_prime_UTR 77316305 77316682 77316305 ID=Msa0426730-mRNA-1:three_prime_utr;Parent=Msa0426730-mRNA-1
Gene Sequence

>Msa0426730

ATGTTGTTGTCTTTGTCTTGGTCTTTCACTTTTTCTCCTCATTCTCCGCAGAAGCATTCTCGGTGTCAATGTTGTAATTTTGTTCCTGGAAACGTTTCTCAAACGGAACGTGGTTTGGAATTCAACACCGGCGGTGCATTTTACCGTCAAGAAAGCGCCACCGGACGTGACCTCGGAGTTCTTGCAGCTTCCTTGCAGAAGAAGGCTAATGGAAGCTTGCGTGTTCTTGATGCACTTTGTGGTTGCGGGATACGGTCGGCGCGGTATTTGAAGGAAGCTGAAGCTGATTTTGTTGTAGCTAATGATGGAAATGAGAGCTATGGAAGGATAATTGAGGAGAATTTGAGTCGGGTTTCGGCGAAAGAAGAGGAAAGATGGGTGGTTACTCATTTAGAAGCTAATAGAGTTATGACTGATTATTACATGCAGAAGAGTTTGTTTGATTTCATTGATGTTGACTCTTTTGGAAGTGATTCTTCGTTTTTGAGGTCTGCTATCATTACTTTGAAATTTGGTGGTCTGCTTTATGTCACTTCAACTGATGGTTTCTCTTCTGGTGGACACAGGCCTCATCATTCTTTAGCTGCTTATGGAGCTTATGTGCGCCCTATGACATATTCAAACGAGATTGGTTTGCGAATGCTTATAGGCGGGGTTGTCAGGGAGGCTGCATTGTTGGGGTACCATATAACTCCCTTGTTTTCGTACTATGCTTATCATGGACCTGTTTTCCGGGTCTTGCTCAGATTGAATCGCGGGAAGCTTCATGATAGTAGACATTATGGTTTTATTGGCCAATGCGACCAGTGTGGAAATTCCCATGAGTTTTCTTGGGACCAACTTGGTCAGATGAGTTGCTCCTGCAGTGTGTCAAAGGTTTCAGACTCGCTTAAGGTATCAGGACCTCTTTGGACAGGGCCTCTTCATGATGCTGCATATCTTACGGATATGTTAGATCTGGCCAAGCAGTGGGGATGGATTGGTTGTGATGGTAAAGACAGTCTTGAAAAGCTTATAAAACAGATGGTGGATGAAAGTGACCCCAGGTTGCCATTTGGGTATATCAAGTTGGATGAGATGGCAAGCCGTGCAAAAATCAATACTCCACCTCTTAGGGCCTTGATGAGCGCCCTGCACGAGAAGGGTTATGCTGCGAGCAGGTCTCACATAACCGCAAATGCAATTAAAACAAATTGCTCCATGACAGAATTCATTAGTATAGCTAAAGAACTATTGCCGGTATCTGTCTCTTAA

Protein sequence

>Msa0426730

MLLSLSWSFTFSPHSPQKHSRCQCCNFVPGNVSQTERGLEFNTGGAFYRQESATGRDLGVLAASLQKKANGSLRVLDALCGCGIRSARYLKEAEADFVVANDGNESYGRIIEENLSRVSAKEEERWVVTHLEANRVMTDYYMQKSLFDFIDVDSFGSDSSFLRSAIITLKFGGLLYVTSTDGFSSGGHRPHHSLAAYGAYVRPMTYSNEIGLRMLIGGVVREAALLGYHITPLFSYYAYHGPVFRVLLRLNRGKLHDSRHYGFIGQCDQCGNSHEFSWDQLGQMSCSCSVSKVSDSLKVSGPLWTGPLHDAAYLTDMLDLAKQWGWIGCDGKDSLEKLIKQMVDESDPRLPFGYIKLDEMASRAKINTPPLRALMSALHEKGYAASRSHITANAIKTNCSMTEFISIAKELLPVSVS*