Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070207.t1 | XP_013459277.1 | 84.2 | 152 | 2 | 1 | 1 | 130 | 29 | 180 | 8.80E-62 | 246.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070207.t1 | Q8RXS1 | 56.6 | 129 | 33 | 2 | 21 | 126 | 47 | 175 | 1.8e-31 | 136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070207.t1 | B7FML9 | 84.2 | 152 | 2 | 1 | 1 | 130 | 29 | 180 | 6.3e-62 | 246.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene070207 | 0.859826 | 3.16E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene070207 | 0.839295 | 1.73E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene070207 | 0.82535 | 4.92E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene070207 | 0.817243 | 3.65E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene070207 | 0.857265 | 1.84E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene070207 | 0.825994 | 3.46E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene070207 | 0.83396 | 3.95E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene070207 | 0.846981 | 1.54E-59 | -1.69E-46 |
| MS.gene049369 | MS.gene070207 | 0.854197 | 1.44E-61 | -1.69E-46 |
| MS.gene049396 | MS.gene070207 | 0.843676 | 1.21E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene070207 | 0.855226 | 7.27E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene070207 | 0.913453 | 6.04E-84 | -1.69E-46 |
| MS.gene049633 | MS.gene070207 | 0.829641 | 4.59E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene070207 | 0.858858 | 6.17E-63 | -1.69E-46 |
| MS.gene049662 | MS.gene070207 | 0.852883 | 3.45E-61 | -1.69E-46 |
| MS.gene049805 | MS.gene070207 | 0.896301 | 4.20E-76 | -1.69E-46 |
| MS.gene050076 | MS.gene070207 | 0.800627 | 1.32E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene070207 | 0.808786 | 2.61E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene070207 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene070207 | 0.832232 | 1.06E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene070207 | 0.803854 | 2.86E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene070207 | 0.835016 | 2.14E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene070207 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene070207 | 0.848366 | 6.42E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene070207 | 0.822067 | 2.89E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene070207 | 0.917866 | 3.15E-86 | -1.69E-46 |
| MS.gene050670 | MS.gene070207 | 0.912032 | 3.10E-83 | -1.69E-46 |
| MS.gene050675 | MS.gene070207 | 0.83159 | 1.53E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene070207 | 0.828044 | 1.12E-54 | -1.69E-46 |
| MS.gene050690 | MS.gene070207 | 0.814942 | 1.19E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene070207 | 0.825423 | 4.73E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene070207 | 0.863006 | 3.39E-64 | -1.69E-46 |
| MS.gene050767 | MS.gene070207 | 0.830984 | 2.16E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene070207 | 0.834021 | 3.81E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene070207 | 0.916761 | 1.21E-85 | -1.69E-46 |
| MS.gene05080 | MS.gene070207 | 0.836241 | 1.05E-56 | -1.69E-46 |
| MS.gene05081 | MS.gene070207 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene070207 | 0.855564 | 5.80E-62 | -1.69E-46 |
| MS.gene05100 | MS.gene070207 | 0.800621 | 1.32E-48 | -1.69E-46 |
| MS.gene05101 | MS.gene070207 | 0.815167 | 1.06E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene070207 | 0.940282 | 3.05E-100 | -1.69E-46 |
| MS.gene051228 | MS.gene070207 | 0.842305 | 2.80E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene070207 | 0.871084 | 8.94E-67 | -1.69E-46 |
| MS.gene051525 | MS.gene070207 | 0.809943 | 1.47E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene070207 | 0.803036 | 4.22E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene070207 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene070207 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene070207 | 0.890351 | 1.07E-73 | -1.69E-46 |
| MS.gene051692 | MS.gene070207 | 0.842304 | 2.81E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene070207 | 0.813701 | 2.24E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene070207 | 0.830355 | 3.08E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene070207 | 0.855787 | 4.99E-62 | -1.69E-46 |
| MS.gene051874 | MS.gene070207 | 0.830826 | 2.36E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene070207 | 0.811208 | 7.85E-51 | -1.69E-46 |
| MS.gene052136 | MS.gene070207 | 0.805031 | 1.62E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene070207 | 0.850892 | 1.27E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene070207 | 0.823592 | 1.27E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene070207 | 0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene070207 | 0.805886 | 1.07E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene070207 | 0.885474 | 7.88E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene070207 | 0.823422 | 1.40E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene070207 | 0.849573 | 2.96E-60 | -1.69E-46 |
| MS.gene052346 | MS.gene070207 | 0.823993 | 1.03E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene070207 | 0.825036 | 5.83E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene070207 | -0.816399 | 5.64E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene070207 | 0.834167 | 3.51E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene070207 | 0.8927 | 1.25E-74 | -1.69E-46 |
| MS.gene052481 | MS.gene070207 | 0.86095 | 1.44E-63 | -1.69E-46 |
| MS.gene052484 | MS.gene070207 | 0.867012 | 1.87E-65 | -1.69E-46 |
| MS.gene052485 | MS.gene070207 | 0.842636 | 2.29E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene070207 | 0.850617 | 1.51E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene070207 | 0.821152 | 4.70E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene070207 | 0.852136 | 5.63E-61 | -1.69E-46 |
| MS.gene052506 | MS.gene070207 | 0.804576 | 2.02E-49 | -1.69E-46 |
| MS.gene052508 | MS.gene070207 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene052510 | MS.gene070207 | 0.805493 | 1.30E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene070207 | 0.858877 | 6.09E-63 | -1.69E-46 |
| MS.gene052822 | MS.gene070207 | 0.814561 | 1.45E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene070207 | 0.807357 | 5.26E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene070207 | 0.802007 | 6.88E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene070207 | 0.815249 | 1.02E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene070207 | 0.812048 | 5.16E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene070207 | 0.823768 | 1.16E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene070207 | 0.835107 | 2.03E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene070207 | 0.836 | 1.21E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene070207 | 0.883905 | 3.02E-71 | -1.69E-46 |
| MS.gene053104 | MS.gene070207 | 0.886235 | 4.08E-72 | -1.69E-46 |
| MS.gene053203 | MS.gene070207 | 0.802413 | 5.68E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene070207 | 0.857456 | 1.61E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene070207 | 0.862399 | 5.21E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene070207 | 0.87158 | 6.13E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene070207 | 0.857188 | 1.93E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene070207 | 0.868195 | 7.82E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene070207 | 0.806531 | 7.86E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene070207 | 0.818338 | 2.07E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene070207 | 0.883785 | 3.34E-71 | -1.69E-46 |
| MS.gene053574 | MS.gene070207 | 0.890612 | 8.41E-74 | -1.69E-46 |
| MS.gene053632 | MS.gene070207 | 0.85142 | 8.98E-61 | -1.69E-46 |
| MS.gene053758 | MS.gene070207 | 0.814954 | 1.18E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene070207 | 0.816516 | 5.31E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene070207 | 0.82569 | 4.09E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene070207 | 0.862673 | 4.29E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene070207 | 0.876017 | 1.95E-68 | -1.69E-46 |
| MS.gene054376 | MS.gene070207 | 0.838455 | 2.85E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene070207 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene070207 | 0.805748 | 1.15E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene070207 | 0.831255 | 1.85E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene070207 | 0.857718 | 1.35E-62 | -1.69E-46 |
| MS.gene054802 | MS.gene070207 | 0.800243 | 1.58E-48 | -1.69E-46 |
| MS.gene054804 | MS.gene070207 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene070207 | -0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene070207 | 0.841893 | 3.60E-58 | -1.69E-46 |
| MS.gene054955 | MS.gene070207 | 0.836167 | 1.10E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene070207 | 0.903511 | 3.22E-79 | -1.69E-46 |
| MS.gene055116 | MS.gene070207 | 0.913378 | 6.60E-84 | -1.69E-46 |
| MS.gene055206 | MS.gene070207 | 0.870615 | 1.28E-66 | -1.69E-46 |
| MS.gene055212 | MS.gene070207 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene070207 | 0.8396 | 1.44E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene070207 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene070207 | 0.855548 | 5.86E-62 | -1.69E-46 |
| MS.gene055362 | MS.gene070207 | 0.825465 | 4.62E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene070207 | 0.821578 | 3.75E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene070207 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene070207 | 0.838182 | 3.35E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene070207 | 0.844192 | 8.81E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene070207 | 0.828891 | 6.99E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene070207 | 0.84151 | 4.55E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene070207 | 0.894279 | 2.86E-75 | -1.69E-46 |
| MS.gene055741 | MS.gene070207 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene055744 | MS.gene070207 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene070207 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene070207 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene070207 | 0.90127 | 3.18E-78 | -1.69E-46 |
| MS.gene055941 | MS.gene070207 | 0.84884 | 4.74E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene070207 | 0.834271 | 3.30E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene070207 | 0.800366 | 1.49E-48 | -1.69E-46 |
| MS.gene056191 | MS.gene070207 | 0.82752 | 1.50E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene070207 | 0.833369 | 5.55E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene070207 | 0.854744 | 1.00E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene070207 | 0.818975 | 1.48E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene070207 | 0.843517 | 1.33E-58 | -1.69E-46 |
| MS.gene056448 | MS.gene070207 | 0.81952 | 1.11E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene070207 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene070207 | 0.917646 | 4.12E-86 | -1.69E-46 |
| MS.gene056590 | MS.gene070207 | -0.802137 | 6.47E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene070207 | -0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene070207 | 0.857575 | 1.49E-62 | -1.69E-46 |
| MS.gene05664 | MS.gene070207 | 0.849266 | 3.61E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene070207 | 0.838587 | 2.63E-57 | -1.69E-46 |
| MS.gene05666 | MS.gene070207 | 0.82809 | 1.09E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene070207 | 0.811221 | 7.80E-51 | -1.69E-46 |
| MS.gene056719 | MS.gene070207 | 0.803506 | 3.38E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene070207 | 0.803377 | 3.59E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene070207 | 0.800943 | 1.14E-48 | -1.69E-46 |
| MS.gene056897 | MS.gene070207 | 0.836456 | 9.26E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene070207 | 0.830545 | 2.77E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene070207 | 0.82618 | 3.12E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene070207 | 0.898482 | 5.08E-77 | -1.69E-46 |
| MS.gene057123 | MS.gene070207 | 0.822355 | 2.48E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene070207 | 0.865634 | 5.12E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene070207 | 0.868625 | 5.68E-66 | -1.69E-46 |
| MS.gene057146 | MS.gene070207 | 0.870679 | 1.22E-66 | -1.69E-46 |
| MS.gene057295 | MS.gene070207 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene057310 | MS.gene070207 | 0.818646 | 1.76E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene070207 | 0.904471 | 1.19E-79 | -1.69E-46 |
| MS.gene05735 | MS.gene070207 | 0.847824 | 9.06E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene070207 | 0.903548 | 3.10E-79 | -1.69E-46 |
| MS.gene057658 | MS.gene070207 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene070207 | 0.870866 | 1.06E-66 | -1.69E-46 |
| MS.gene057749 | MS.gene070207 | 0.832063 | 1.17E-55 | -1.69E-46 |
| MS.gene057775 | MS.gene070207 | 0.802635 | 5.11E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene070207 | 0.833057 | 6.63E-56 | -1.69E-46 |
| MS.gene057856 | MS.gene070207 | 0.835194 | 1.93E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene070207 | 0.830355 | 3.08E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene070207 | 0.808635 | 2.81E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene070207 | 0.85513 | 7.76E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene070207 | 0.829496 | 4.98E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene070207 | 0.890375 | 1.04E-73 | -1.69E-46 |
| MS.gene058082 | MS.gene070207 | 0.821824 | 3.29E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene070207 | 0.83142 | 1.69E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene070207 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene070207 | 0.854314 | 1.34E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene070207 | 0.826436 | 2.72E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene070207 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene070207 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene070207 | 0.833315 | 5.72E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene070207 | 0.814201 | 1.74E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene070207 | 0.866285 | 3.19E-65 | -1.69E-46 |
| MS.gene058444 | MS.gene070207 | 0.814686 | 1.36E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene070207 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene058544 | MS.gene070207 | 0.830898 | 2.27E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene070207 | 0.855706 | 5.27E-62 | -1.69E-46 |
| MS.gene058700 | MS.gene070207 | 0.848054 | 7.83E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene070207 | 0.865804 | 4.53E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene070207 | 0.811008 | 8.68E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene070207 | 0.828693 | 7.80E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene070207 | 0.858219 | 9.57E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene070207 | 0.821195 | 4.59E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene070207 | 0.855889 | 4.66E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene070207 | 0.826123 | 3.22E-54 | -1.69E-46 |
| MS.gene059029 | MS.gene070207 | 0.821275 | 4.40E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene070207 | 0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene070207 | 0.848572 | 5.63E-60 | -1.69E-46 |
| MS.gene05934 | MS.gene070207 | 0.8679 | 9.73E-66 | -1.69E-46 |
| MS.gene059366 | MS.gene070207 | 0.852382 | 4.79E-61 | -1.69E-46 |
| MS.gene059368 | MS.gene070207 | 0.819376 | 1.20E-52 | -1.69E-46 |
| MS.gene059402 | MS.gene070207 | -0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene059455 | MS.gene070207 | 0.867362 | 1.45E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene070207 | 0.880993 | 3.47E-70 | -1.69E-46 |
| MS.gene059597 | MS.gene070207 | 0.819564 | 1.09E-52 | -1.69E-46 |
| MS.gene05959 | MS.gene070207 | 0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene070207 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene070207 | 0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene070207 | 0.858995 | 5.62E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene070207 | 0.824957 | 6.09E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene070207 | 0.907584 | 4.33E-81 | -1.69E-46 |
| MS.gene059692 | MS.gene070207 | 0.899335 | 2.19E-77 | -1.69E-46 |
| MS.gene059695 | MS.gene070207 | 0.902434 | 9.73E-79 | -1.69E-46 |
| MS.gene059711 | MS.gene070207 | 0.839559 | 1.47E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene070207 | 0.855664 | 5.42E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene070207 | 0.806932 | 6.47E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene070207 | 0.83778 | 4.25E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene070207 | 0.853127 | 2.93E-61 | -1.69E-46 |
| MS.gene059953 | MS.gene070207 | -0.811504 | 6.77E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene070207 | -0.813615 | 2.34E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene070207 | 0.871888 | 4.85E-67 | -1.69E-46 |
| MS.gene060193 | MS.gene070207 | 0.819485 | 1.13E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene070207 | 0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene070207 | 0.885067 | 1.12E-71 | -1.69E-46 |
| MS.gene060482 | MS.gene070207 | 0.809264 | 2.06E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene070207 | 0.815619 | 8.42E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene070207 | 0.91378 | 4.14E-84 | -1.69E-46 |
| MS.gene060818 | MS.gene070207 | 0.873797 | 1.11E-67 | -1.69E-46 |
| MS.gene060835 | MS.gene070207 | 0.899974 | 1.16E-77 | -1.69E-46 |
| MS.gene060837 | MS.gene070207 | 0.860002 | 2.80E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene070207 | 0.851582 | 8.08E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene070207 | 0.80664 | 7.46E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene070207 | 0.896001 | 5.61E-76 | -1.69E-46 |
| MS.gene061049 | MS.gene070207 | 0.830034 | 3.69E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene070207 | -0.843927 | 1.04E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene070207 | 0.823417 | 1.40E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene070207 | 0.847648 | 1.01E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene070207 | 0.86904 | 4.17E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070207.t1 | MTR_3g435320 | 84.211 | 152 | 2 | 1 | 1 | 130 | 29 | 180 | 4.57e-88 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070207.t1 | AT1G18730 | 56.154 | 130 | 34 | 2 | 20 | 126 | 46 | 175 | 7.84e-44 | 141 |
| MS.gene070207.t1 | AT1G18730 | 57.480 | 127 | 31 | 2 | 23 | 126 | 2 | 128 | 8.40e-44 | 140 |
| MS.gene070207.t1 | AT1G18730 | 56.154 | 130 | 34 | 2 | 20 | 126 | 45 | 174 | 9.07e-44 | 141 |
| MS.gene070207.t1 | AT1G18730 | 47.826 | 92 | 25 | 2 | 20 | 88 | 45 | 136 | 6.10e-24 | 90.1 |
| MS.gene070207.t1 | AT1G18730 | 47.826 | 92 | 25 | 2 | 20 | 88 | 45 | 136 | 7.22e-24 | 90.5 |
Find 42 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGGGGAGTCTTATTCTT+TGG | 0.250564 | 3.4:-12730585 | MS.gene070207:CDS |
| GTACATAATGTTCACTGTTT+GGG | 0.251834 | 3.4:-12730601 | MS.gene070207:CDS |
| TATGTTTCTGAATCGTAATA+TGG | 0.282914 | 3.4:+12730437 | None:intergenic |
| GGTTATGCAGCAAGAGGTTA+TGG | 0.323069 | 3.4:-12728974 | MS.gene070207:intron |
| GGTACATAATGTTCACTGTT+TGG | 0.337904 | 3.4:-12730602 | MS.gene070207:CDS |
| CTCACGCCACAGGGCTTCTC+TGG | 0.342613 | 3.4:+12728942 | None:intergenic |
| GAGGAGATGGCACTGGAAAC+TGG | 0.350136 | 3.4:-12730403 | MS.gene070207:CDS |
| ATTGCCATCAGTGGAATATC+TGG | 0.357533 | 3.4:+12730951 | None:intergenic |
| CCTCTTTCACAGGTCATTGC+AGG | 0.357586 | 3.4:-12731403 | MS.gene070207:intron |
| ATTACGATTCAGAAACATAT+AGG | 0.360570 | 3.4:-12730433 | MS.gene070207:CDS |
| TTACGATTCAGAAACATATA+GGG | 0.363321 | 3.4:-12730432 | MS.gene070207:CDS |
| GGCAATTCTAGTAGAACAAT+TGG | 0.375396 | 3.4:-12730934 | MS.gene070207:CDS |
| TTTGTAAATAAGGTGTTAGA+TGG | 0.415388 | 3.4:-12731014 | MS.gene070207:intron |
| ATGTTTCTGAATCGTAATAT+GGG | 0.462762 | 3.4:+12730438 | None:intergenic |
| ACTTGAAGAAGCAGCAAAGA+AGG | 0.487076 | 3.4:-12728875 | MS.gene070207:CDS |
| CTTATTCTTTGGTTCCATGA+AGG | 0.490823 | 3.4:-12730574 | MS.gene070207:intron |
| GGAGATGGAGGAGATGGCAC+TGG | 0.510554 | 3.4:-12730410 | MS.gene070207:CDS |
| CAATCAACTCCTCACGCCAC+AGG | 0.510782 | 3.4:+12728932 | None:intergenic |
| TGAAAGAGGGTAGAGTTTGA+AGG | 0.517301 | 3.4:+12731417 | None:intergenic |
| TCAGAAACATATAGGGGAGA+TGG | 0.524239 | 3.4:-12730425 | MS.gene070207:CDS |
| GCATCTATGTGCAAAGTGAA+TGG | 0.524899 | 3.4:-12730978 | MS.gene070207:CDS |
| TTTAATCCTTTGCAGACGCT+TGG | 0.529767 | 3.4:-12730623 | MS.gene070207:intron |
| CAAACTCTACCCTCTTTCAC+AGG | 0.545894 | 3.4:-12731413 | MS.gene070207:CDS |
| TACATAATGTTCACTGTTTG+GGG | 0.555106 | 3.4:-12730600 | MS.gene070207:CDS |
| GTAGAGTTTGAAGGGTGCCT+AGG | 0.557136 | 3.4:+12731426 | None:intergenic |
| CCTGCAATGACCTGTGAAAG+AGG | 0.564483 | 3.4:+12731403 | None:intergenic |
| CAGAGAAGCCCTGTGGCGTG+AGG | 0.566266 | 3.4:-12728941 | MS.gene070207:CDS |
| TTTACCAGATATTCCACTGA+TGG | 0.571820 | 3.4:-12730955 | MS.gene070207:CDS |
| TATAGGGGAGATGGAGGAGA+TGG | 0.574917 | 3.4:-12730416 | MS.gene070207:CDS |
| GCAAGAGGTTATGGAAGCAG+AGG | 0.578491 | 3.4:-12728965 | MS.gene070207:CDS |
| TCTACTAGAATTGCCATCAG+TGG | 0.584764 | 3.4:+12730942 | None:intergenic |
| GAAACATATAGGGGAGATGG+AGG | 0.597630 | 3.4:-12730422 | MS.gene070207:CDS |
| GAAAGAGGGTAGAGTTTGAA+GGG | 0.602642 | 3.4:+12731418 | None:intergenic |
| AGAAGCAGCAAAGAAGGAGG+AGG | 0.609366 | 3.4:-12728869 | MS.gene070207:CDS |
| AATCAACTCCTCACGCCACA+GGG | 0.615196 | 3.4:+12728933 | None:intergenic |
| CTGCAATGACCTGTGAAAGA+GGG | 0.628798 | 3.4:+12731404 | None:intergenic |
| TGGAAACTGGATATATGAGA+AGG | 0.633434 | 3.4:-12730390 | MS.gene070207:intron |
| ATTCTAGTAGAACAATTGGA+AGG | 0.633447 | 3.4:-12730930 | MS.gene070207:intron |
| TACGATTCAGAAACATATAG+GGG | 0.649546 | 3.4:-12730431 | MS.gene070207:CDS |
| GTGGCGTGAGGAGTTGATTG+AGG | 0.650121 | 3.4:-12728929 | MS.gene070207:CDS |
| TGAAGAAGCAGCAAAGAAGG+AGG | 0.658434 | 3.4:-12728872 | MS.gene070207:CDS |
| CAGAGGCCAGAGAAGCCCTG+TGG | 0.664634 | 3.4:-12728948 | MS.gene070207:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATATAAACTGAAAA+TGG | + | chr3.4:12729244-12729263 | None:intergenic | 10.0% |
| !!! | ATCAAGTTTTTTTTTTTTTT+AGG | + | chr3.4:12730684-12730703 | None:intergenic | 10.0% |
| !!! | ATTTTCAGTTTATATTTTAA+TGG | - | chr3.4:12729243-12729262 | MS.gene070207:intron | 10.0% |
| !!! | TCAAGTTTTTTTTTTTTTTA+GGG | + | chr3.4:12730683-12730702 | None:intergenic | 10.0% |
| !!! | TTTTAAATTTGATTGTTTAT+TGG | - | chr3.4:12729639-12729658 | MS.gene070207:intron | 10.0% |
| !!! | AAAATATTGAGTTTAGAATT+TGG | + | chr3.4:12730886-12730905 | None:intergenic | 15.0% |
| !!! | AAATAATACATTTTTGACAA+AGG | + | chr3.4:12729601-12729620 | None:intergenic | 15.0% |
| !!! | AATAATACATTTTTGACAAA+GGG | + | chr3.4:12729600-12729619 | None:intergenic | 15.0% |
| !!! | ACAAATTTTTGCTTATATTT+TGG | - | chr3.4:12729553-12729572 | MS.gene070207:intron | 15.0% |
| !!! | ATTTAAAATGCAAAATATCA+TGG | + | chr3.4:12731281-12731300 | None:intergenic | 15.0% |
| !!! | CAAATTTTTGCTTATATTTT+GGG | - | chr3.4:12729554-12729573 | MS.gene070207:intron | 15.0% |
| !!! | GATATTTTTTTCATTGATTT+AGG | + | chr3.4:12730510-12730529 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTAAAAGCAAAT+TGG | - | chr3.4:12731119-12731138 | MS.gene070207:intron | 15.0% |
| !!! | TTAAATTGTAGCTATTTTTA+TGG | - | chr3.4:12731295-12731314 | MS.gene070207:intron | 15.0% |
| !!! | TTTGTTATATGATTTTATGT+TGG | - | chr3.4:12729782-12729801 | MS.gene070207:intron | 15.0% |
| !! | AAAAAAATATCGACATCATT+TGG | - | chr3.4:12730519-12730538 | MS.gene070207:intron | 20.0% |
| !! | TAACATGTTTAACATGATTT+AGG | - | chr3.4:12729828-12729847 | MS.gene070207:intron | 20.0% |
| !! | TAATTTCCATGGATAATTAT+CGG | - | chr3.4:12729046-12729065 | MS.gene070207:intron | 20.0% |
| !! | TATACATCAAATATTAGAAG+AGG | - | chr3.4:12731041-12731060 | MS.gene070207:intron | 20.0% |
| !! | TCTCTTTGTATTTGTAAATA+AGG | - | chr3.4:12729266-12729285 | MS.gene070207:intron | 20.0% |
| !! | TGAACAAAAGTTAATGTATT+TGG | + | chr3.4:12729534-12729553 | None:intergenic | 20.0% |
| !!! | AAGGCTTTTCTTAAAATAAA+TGG | + | chr3.4:12731198-12731217 | None:intergenic | 20.0% |
| !!! | GGAATTTAAACATGTATTTT+AGG | + | chr3.4:12731224-12731243 | None:intergenic | 20.0% |
| !!! | TAGATACTATACTTTGAAAA+GGG | - | chr3.4:12730085-12730104 | MS.gene070207:intron | 20.0% |
| !!! | TTATCAATCTTTAATTTCCA+TGG | - | chr3.4:12729035-12729054 | MS.gene070207:intron | 20.0% |
| !!! | TTTTCTTAAAATAAATGGAC+AGG | + | chr3.4:12731193-12731212 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTACAACTTAG+AGG | + | chr3.4:12730754-12730773 | None:intergenic | 20.0% |
| ! | AAATAGAACAAAAAGTTGGA+GGG | - | chr3.4:12731384-12731403 | MS.gene070207:intron | 25.0% |
| ! | AACTCTCTTCTATATCATAT+AGG | - | chr3.4:12731067-12731086 | MS.gene070207:intron | 25.0% |
| ! | AATTTCCATGGATAATTATC+GGG | - | chr3.4:12729047-12729066 | MS.gene070207:intron | 25.0% |
| ! | ACTAGAAGAAGTTTAAATGT+CGG | - | chr3.4:12729103-12729122 | MS.gene070207:intron | 25.0% |
| ! | ATATGATATAGAAGAGAGTT+TGG | + | chr3.4:12731067-12731086 | None:intergenic | 25.0% |
| ! | ATTACGATTCAGAAACATAT+AGG | - | chr3.4:12729857-12729876 | MS.gene070207:intron | 25.0% |
| ! | CACATGTTAAAATACCAAAA+GGG | + | chr3.4:12730366-12730385 | None:intergenic | 25.0% |
| ! | CTTACTTTAGTATATCTACA+AGG | + | chr3.4:12729997-12730016 | None:intergenic | 25.0% |
| ! | TCACATGTTAAAATACCAAA+AGG | + | chr3.4:12730367-12730386 | None:intergenic | 25.0% |
| ! | TGATGTATAAGATAATCGTT+AGG | + | chr3.4:12731030-12731049 | None:intergenic | 25.0% |
| ! | TGTAGATATACTAAAGTAAG+AGG | - | chr3.4:12729997-12730016 | MS.gene070207:intron | 25.0% |
| ! | TTACGATTCAGAAACATATA+GGG | - | chr3.4:12729858-12729877 | MS.gene070207:intron | 25.0% |
| !! | ATGTTTCTGAATCGTAATAT+GGG | + | chr3.4:12729855-12729874 | None:intergenic | 25.0% |
| !! | CAAAAACACGATATATTTTG+AGG | - | chr3.4:12730636-12730655 | MS.gene070207:intron | 25.0% |
| !! | GTAGATACTATACTTTGAAA+AGG | - | chr3.4:12730084-12730103 | MS.gene070207:intron | 25.0% |
| !! | TATGTTTCTGAATCGTAATA+TGG | + | chr3.4:12729856-12729875 | None:intergenic | 25.0% |
| !! | TTTGTAAATAAGGTGTTAGA+TGG | - | chr3.4:12729276-12729295 | MS.gene070207:intron | 25.0% |
| !!! | AAAAGGGATTTTAGGTAAAA+TGG | - | chr3.4:12730101-12730120 | MS.gene070207:intron | 25.0% |
| !!! | AAACATGTATTTTAGGAAGA+AGG | + | chr3.4:12731217-12731236 | None:intergenic | 25.0% |
| !!! | ACTCATTTTTGCTTACATTT+TGG | + | chr3.4:12729478-12729497 | None:intergenic | 25.0% |
| !!! | AGTTTTCTGCTAGTTTTTAT+AGG | - | chr3.4:12729208-12729227 | MS.gene070207:intron | 25.0% |
| !!! | ATACTTTGAAAAGGGATTTT+AGG | - | chr3.4:12730093-12730112 | MS.gene070207:intron | 25.0% |
| !!! | CTCATTTTTGCTTACATTTT+GGG | + | chr3.4:12729477-12729496 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTATATTTTGGGA+CGG | - | chr3.4:12729558-12729577 | MS.gene070207:intron | 25.0% |
| AAAGGCAACAACACTTTAAT+CGG | - | chr3.4:12730481-12730500 | MS.gene070207:intron | 30.0% | |
| AAATATCGACATCATTTGGT+CGG | - | chr3.4:12730523-12730542 | MS.gene070207:intron | 30.0% | |
| AATGACAGAAAATAGAAGTG+TGG | + | chr3.4:12731245-12731264 | None:intergenic | 30.0% | |
| AATGCAAAATATCATGGATG+TGG | + | chr3.4:12731275-12731294 | None:intergenic | 30.0% | |
| AGTTGTTACTACTTTCTCTA+AGG | + | chr3.4:12729137-12729156 | None:intergenic | 30.0% | |
| ATTCTAGTAGAACAATTGGA+AGG | - | chr3.4:12729360-12729379 | MS.gene070207:intron | 30.0% | |
| CTTATAACCGAGAAAACATT+TGG | - | chr3.4:12729393-12729412 | MS.gene070207:intron | 30.0% | |
| GAAATAGAACAAAAAGTTGG+AGG | - | chr3.4:12731383-12731402 | MS.gene070207:intron | 30.0% | |
| GAGGAAATAGAACAAAAAGT+TGG | - | chr3.4:12731380-12731399 | MS.gene070207:intron | 30.0% | |
| GGATACATGATAGATGATAA+AGG | - | chr3.4:12730463-12730482 | MS.gene070207:intron | 30.0% | |
| GTACATAATGTTCACTGTTT+GGG | - | chr3.4:12729689-12729708 | MS.gene070207:intron | 30.0% | |
| TACATAATGTTCACTGTTTG+GGG | - | chr3.4:12729690-12729709 | MS.gene070207:intron | 30.0% | |
| TACGATTCAGAAACATATAG+GGG | - | chr3.4:12729859-12729878 | MS.gene070207:intron | 30.0% | |
| ! | AATTGAGTAAACAACCCTTT+TGG | - | chr3.4:12730349-12730368 | MS.gene070207:intron | 30.0% |
| ! | CAGTTGGATTGAATTTTCAA+AGG | - | chr3.4:12729080-12729099 | MS.gene070207:intron | 30.0% |
| ! | TAAGATGCCAAATGTTTTCT+CGG | + | chr3.4:12729403-12729422 | None:intergenic | 30.0% |
| ! | TCATGTTAACATGTGTTTTG+AGG | - | chr3.4:12730442-12730461 | MS.gene070207:CDS | 30.0% |
| ! | TTTTGTTACAACTTAGAGGT+TGG | + | chr3.4:12730750-12730769 | None:intergenic | 30.0% |
| !! | AGTCAACATAAGTTGATGTA+TGG | - | chr3.4:12729495-12729514 | MS.gene070207:intron | 30.0% |
| !! | ATGAGTTGATCATGTGAATT+TGG | + | chr3.4:12730834-12730853 | None:intergenic | 30.0% |
| !!! | CGTTGTTAGCATTTTTTCTA+AGG | - | chr3.4:12730187-12730206 | MS.gene070207:intron | 30.0% |
| AATACTAGAAGCCACAACAA+GGG | - | chr3.4:12729958-12729977 | MS.gene070207:intron | 35.0% | |
| ACACCCAAGTGAAAAAATCT+GGG | + | chr3.4:12730568-12730587 | None:intergenic | 35.0% | |
| CGAATTCAATCATCAGCTAA+CGG | + | chr3.4:12730790-12730809 | None:intergenic | 35.0% | |
| GAATTCAATCATCAGCTAAC+GGG | + | chr3.4:12730789-12730808 | None:intergenic | 35.0% | |
| GAGGAACTTGTAGGTTATAT+GGG | + | chr3.4:12730265-12730284 | None:intergenic | 35.0% | |
| GGCAATTCTAGTAGAACAAT+TGG | - | chr3.4:12729356-12729375 | MS.gene070207:intron | 35.0% | |
| GGTACATAATGTTCACTGTT+TGG | - | chr3.4:12729688-12729707 | MS.gene070207:intron | 35.0% | |
| TAATACTAGAAGCCACAACA+AGG | - | chr3.4:12729957-12729976 | MS.gene070207:intron | 35.0% | |
| TGAGGAACTTGTAGGTTATA+TGG | + | chr3.4:12730266-12730285 | None:intergenic | 35.0% | |
| TGCTACATGAAACATTCATG+TGG | + | chr3.4:12730132-12730151 | None:intergenic | 35.0% | |
| TGGAAACTGGATATATGAGA+AGG | - | chr3.4:12729900-12729919 | MS.gene070207:intron | 35.0% | |
| TTTACCAGATATTCCACTGA+TGG | - | chr3.4:12729335-12729354 | MS.gene070207:intron | 35.0% | |
| ! | CTTATTCTTTGGTTCCATGA+AGG | - | chr3.4:12729716-12729735 | MS.gene070207:intron | 35.0% |
| ! | TTTTATGGTTATGCAGCAAG+AGG | - | chr3.4:12731310-12731329 | MS.gene070207:intron | 35.0% |
| !! | ACTTAGAGGTTGGTAAACAT+AGG | + | chr3.4:12730740-12730759 | None:intergenic | 35.0% |
| !! | AGTAAGAGGAGTGTTATGAA+CGG | - | chr3.4:12730011-12730030 | MS.gene070207:intron | 35.0% |
| !!! | CGAAAAGTGTTTTACCTTCA+TGG | + | chr3.4:12729733-12729752 | None:intergenic | 35.0% |
| !!! | GAACCCAGATTTTTTCACTT+GGG | - | chr3.4:12730562-12730581 | MS.gene070207:intron | 35.0% |
| !!! | GCATTGATTTTTTCCAGATG+AGG | + | chr3.4:12730284-12730303 | None:intergenic | 35.0% |
| !!! | GGAGTTTTATTGTGTGCAAT+CGG | + | chr3.4:12731009-12731028 | None:intergenic | 35.0% |
| AAGCGTCTGCAAAGGATTAA+AGG | + | chr3.4:12729668-12729687 | None:intergenic | 40.0% | |
| ACTTGAAGAAGCAGCAAAGA+AGG | - | chr3.4:12731415-12731434 | MS.gene070207:CDS | 40.0% | |
| ACTTTAGTAGCCCAATAGCA+TGG | - | chr3.4:12730222-12730241 | MS.gene070207:intron | 40.0% | |
| AGCGTCTGCAAAGGATTAAA+GGG | + | chr3.4:12729667-12729686 | None:intergenic | 40.0% | |
| ATTGCCATCAGTGGAATATC+TGG | + | chr3.4:12729342-12729361 | None:intergenic | 40.0% | |
| CACACCCAAGTGAAAAAATC+TGG | + | chr3.4:12730569-12730588 | None:intergenic | 40.0% | |
| GAAAGAGGGTAGAGTTTGAA+GGG | + | chr3.4:12728875-12728894 | None:intergenic | 40.0% | |
| GCATCTATGTGCAAAGTGAA+TGG | - | chr3.4:12729312-12729331 | MS.gene070207:intron | 40.0% | |
| TAACCTACAAGTTCCTCATC+TGG | - | chr3.4:12730268-12730287 | MS.gene070207:intron | 40.0% | |
| TCAGAAACATATAGGGGAGA+TGG | - | chr3.4:12729865-12729884 | MS.gene070207:intron | 40.0% | |
| TCCAACCCGATAATTATCCA+TGG | + | chr3.4:12729055-12729074 | None:intergenic | 40.0% | |
| TCCATGGATAATTATCGGGT+TGG | - | chr3.4:12729051-12729070 | MS.gene070207:intron | 40.0% | |
| TCTACTAGAATTGCCATCAG+TGG | + | chr3.4:12729351-12729370 | None:intergenic | 40.0% | |
| TGAAAGAGGGTAGAGTTTGA+AGG | + | chr3.4:12728876-12728895 | None:intergenic | 40.0% | |
| TTTAATCCTTTGCAGACGCT+TGG | - | chr3.4:12729667-12729686 | MS.gene070207:intron | 40.0% | |
| TTTCCAGATGAGGAACTTGT+AGG | + | chr3.4:12730274-12730293 | None:intergenic | 40.0% | |
| !! | GTTTGGGGAGTCTTATTCTT+TGG | - | chr3.4:12729705-12729724 | MS.gene070207:intron | 40.0% |
| !!! | CGAACCCAGATTTTTTCACT+TGG | - | chr3.4:12730561-12730580 | MS.gene070207:intron | 40.0% |
| CAAACTCTACCCTCTTTCAC+AGG | - | chr3.4:12728877-12728896 | MS.gene070207:CDS | 45.0% | |
| CTGCAATGACCTGTGAAAGA+GGG | + | chr3.4:12728889-12728908 | None:intergenic | 45.0% | |
| GAAACATATAGGGGAGATGG+AGG | - | chr3.4:12729868-12729887 | MS.gene070207:intron | 45.0% | |
| GGTTATGCAGCAAGAGGTTA+TGG | - | chr3.4:12731316-12731335 | MS.gene070207:intron | 45.0% | |
| TATGTACCAAGCGTCTGCAA+AGG | + | chr3.4:12729676-12729695 | None:intergenic | 45.0% | |
| TGAAGAAGCAGCAAAGAAGG+AGG | - | chr3.4:12731418-12731437 | MS.gene070207:CDS | 45.0% | |
| ! | TGATTTGTGCTCCCTTGTTG+TGG | + | chr3.4:12729972-12729991 | None:intergenic | 45.0% |
| AATCAACTCCTCACGCCACA+GGG | + | chr3.4:12731360-12731379 | None:intergenic | 50.0% | |
| AGAAGCAGCAAAGAAGGAGG+AGG | - | chr3.4:12731421-12731440 | MS.gene070207:CDS | 50.0% | |
| CCTCTTTCACAGGTCATTGC+AGG | - | chr3.4:12728887-12728906 | MS.gene070207:CDS | 50.0% | |
| CCTGCAATGACCTGTGAAAG+AGG | + | chr3.4:12728890-12728909 | None:intergenic | 50.0% | |
| GCAAGAGGTTATGGAAGCAG+AGG | - | chr3.4:12731325-12731344 | MS.gene070207:intron | 50.0% | |
| GTTCGTTGGGCCATGCTATT+GGG | + | chr3.4:12730235-12730254 | None:intergenic | 50.0% | |
| GTTGGTACATCGGTGGTTGT+TGG | + | chr3.4:12730963-12730982 | None:intergenic | 50.0% | |
| TATAGGGGAGATGGAGGAGA+TGG | - | chr3.4:12729874-12729893 | MS.gene070207:intron | 50.0% | |
| TCGGTGGTTGTTGGACTATC+AGG | + | chr3.4:12730954-12730973 | None:intergenic | 50.0% | |
| TGTAGGTTATATGGGCGCAC+AGG | + | chr3.4:12730257-12730276 | None:intergenic | 50.0% | |
| !! | GTAGAGTTTGAAGGGTGCCT+AGG | + | chr3.4:12728867-12728886 | None:intergenic | 50.0% |
| ACCACCGATGTACCAACTGC+AGG | - | chr3.4:12730966-12730985 | MS.gene070207:CDS | 55.0% | |
| ATATGGGCGCACAGGTTCGT+TGG | + | chr3.4:12730249-12730268 | None:intergenic | 55.0% | |
| CAATCAACTCCTCACGCCAC+AGG | + | chr3.4:12731361-12731380 | None:intergenic | 55.0% | |
| GACAATCTCTCGCCTGCAGT+TGG | + | chr3.4:12730981-12731000 | None:intergenic | 55.0% | |
| GGTTCGTTGGGCCATGCTAT+TGG | + | chr3.4:12730236-12730255 | None:intergenic | 55.0% | |
| TATGGGCGCACAGGTTCGTT+GGG | + | chr3.4:12730248-12730267 | None:intergenic | 55.0% | |
| ! | CTCGCCTGCAGTTGGTACAT+CGG | + | chr3.4:12730973-12730992 | None:intergenic | 55.0% |
| ! | GAGGAGATGGCACTGGAAAC+TGG | - | chr3.4:12729887-12729906 | MS.gene070207:intron | 55.0% |
| ! | GTGGCGTGAGGAGTTGATTG+AGG | - | chr3.4:12731361-12731380 | MS.gene070207:intron | 55.0% |
| !! | ATCGGGTTGGATAGCGCAGT+TGG | - | chr3.4:12729064-12729083 | MS.gene070207:intron | 55.0% |
| GGAGATGGAGGAGATGGCAC+TGG | - | chr3.4:12729880-12729899 | MS.gene070207:intron | 60.0% | |
| ! | GCCTGCAGTTGGTACATCGG+TGG | + | chr3.4:12730970-12730989 | None:intergenic | 60.0% |
| CAGAGAAGCCCTGTGGCGTG+AGG | - | chr3.4:12731349-12731368 | MS.gene070207:intron | 65.0% | |
| CAGAGGCCAGAGAAGCCCTG+TGG | - | chr3.4:12731342-12731361 | MS.gene070207:intron | 65.0% | |
| CTCACGCCACAGGGCTTCTC+TGG | + | chr3.4:12731351-12731370 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 12728864 | 12731448 | 12728864 | ID=MS.gene070207 |
| chr3.4 | mRNA | 12728864 | 12731448 | 12728864 | ID=MS.gene070207.t1;Parent=MS.gene070207 |
| chr3.4 | exon | 12731404 | 12731448 | 12731404 | ID=MS.gene070207.t1.exon1;Parent=MS.gene070207.t1 |
| chr3.4 | CDS | 12731404 | 12731448 | 12731404 | ID=cds.MS.gene070207.t1;Parent=MS.gene070207.t1 |
| chr3.4 | exon | 12730931 | 12731024 | 12730931 | ID=MS.gene070207.t1.exon2;Parent=MS.gene070207.t1 |
| chr3.4 | CDS | 12730931 | 12731024 | 12730931 | ID=cds.MS.gene070207.t1;Parent=MS.gene070207.t1 |
| chr3.4 | exon | 12730575 | 12730630 | 12730575 | ID=MS.gene070207.t1.exon3;Parent=MS.gene070207.t1 |
| chr3.4 | CDS | 12730575 | 12730630 | 12730575 | ID=cds.MS.gene070207.t1;Parent=MS.gene070207.t1 |
| chr3.4 | exon | 12730391 | 12730462 | 12730391 | ID=MS.gene070207.t1.exon4;Parent=MS.gene070207.t1 |
| chr3.4 | CDS | 12730391 | 12730462 | 12730391 | ID=cds.MS.gene070207.t1;Parent=MS.gene070207.t1 |
| chr3.4 | exon | 12728864 | 12728986 | 12728864 | ID=MS.gene070207.t1.exon5;Parent=MS.gene070207.t1 |
| chr3.4 | CDS | 12728864 | 12728986 | 12728864 | ID=cds.MS.gene070207.t1;Parent=MS.gene070207.t1 |
| Gene Sequence |
| Protein sequence |
