Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07612.t1 | AFK41919.1 | 91.9 | 309 | 20 | 3 | 1 | 308 | 1 | 305 | 2.60E-120 | 441.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07612.t1 | Q8GWQ2 | 47.2 | 318 | 121 | 9 | 1 | 308 | 1 | 281 | 3.1e-53 | 210.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07612.t1 | G7I674 | 92.9 | 309 | 17 | 3 | 1 | 308 | 1 | 305 | 1.9e-120 | 441.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene07612 | -0.814489 | 1.50E-51 | -1.69E-46 |
MS.gene049171 | MS.gene07612 | -0.869262 | 3.53E-66 | -1.69E-46 |
MS.gene049217 | MS.gene07612 | -0.855796 | 4.96E-62 | -1.69E-46 |
MS.gene049222 | MS.gene07612 | -0.863627 | 2.18E-64 | -1.69E-46 |
MS.gene049232 | MS.gene07612 | -0.819633 | 1.05E-52 | -1.69E-46 |
MS.gene049281 | MS.gene07612 | 0.840345 | 9.19E-58 | -1.69E-46 |
MS.gene049285 | MS.gene07612 | -0.857739 | 1.33E-62 | -1.69E-46 |
MS.gene049320 | MS.gene07612 | -0.868217 | 7.69E-66 | -1.69E-46 |
MS.gene04939 | MS.gene07612 | -0.800836 | 1.20E-48 | -1.69E-46 |
MS.gene049609 | MS.gene07612 | -0.843553 | 1.31E-58 | -1.69E-46 |
MS.gene049611 | MS.gene07612 | 0.838399 | 2.94E-57 | -1.69E-46 |
MS.gene049633 | MS.gene07612 | -0.834294 | 3.26E-56 | -1.69E-46 |
MS.gene049634 | MS.gene07612 | 0.819381 | 1.20E-52 | -1.69E-46 |
MS.gene049805 | MS.gene07612 | -0.821265 | 4.43E-53 | -1.69E-46 |
MS.gene050082 | MS.gene07612 | 0.806968 | 6.36E-50 | -1.69E-46 |
MS.gene05010 | MS.gene07612 | -0.825399 | 4.79E-54 | -1.69E-46 |
MS.gene050163 | MS.gene07612 | -0.842232 | 2.93E-58 | -1.69E-46 |
MS.gene050165 | MS.gene07612 | -0.838113 | 3.49E-57 | -1.69E-46 |
MS.gene050170 | MS.gene07612 | -0.845532 | 3.83E-59 | -1.69E-46 |
MS.gene050323 | MS.gene07612 | -0.850243 | 1.93E-60 | -1.69E-46 |
MS.gene050333 | MS.gene07612 | -0.837606 | 4.71E-57 | -1.69E-46 |
MS.gene050380 | MS.gene07612 | 0.802454 | 5.57E-49 | -1.69E-46 |
MS.gene050381 | MS.gene07612 | 0.844779 | 6.12E-59 | -1.69E-46 |
MS.gene050444 | MS.gene07612 | -0.809797 | 1.58E-50 | -1.69E-46 |
MS.gene050496 | MS.gene07612 | -0.850235 | 1.94E-60 | -1.69E-46 |
MS.gene050504 | MS.gene07612 | -0.861722 | 8.40E-64 | -1.69E-46 |
MS.gene050518 | MS.gene07612 | -0.833649 | 4.72E-56 | -1.69E-46 |
MS.gene050538 | MS.gene07612 | -0.817409 | 3.35E-52 | -1.69E-46 |
MS.gene050577 | MS.gene07612 | -0.851057 | 1.14E-60 | -1.69E-46 |
MS.gene050593 | MS.gene07612 | -0.808264 | 3.37E-50 | -1.69E-46 |
MS.gene050612 | MS.gene07612 | -0.865523 | 5.55E-65 | -1.69E-46 |
MS.gene050647 | MS.gene07612 | 0.812874 | 3.40E-51 | -1.69E-46 |
MS.gene050675 | MS.gene07612 | -0.849847 | 2.49E-60 | -1.69E-46 |
MS.gene050699 | MS.gene07612 | -0.865496 | 5.66E-65 | -1.69E-46 |
MS.gene050747 | MS.gene07612 | -0.84675 | 1.79E-59 | -1.69E-46 |
MS.gene050772 | MS.gene07612 | -0.866158 | 3.50E-65 | -1.69E-46 |
MS.gene050809 | MS.gene07612 | 0.80646 | 8.14E-50 | -1.69E-46 |
MS.gene05080 | MS.gene07612 | -0.823403 | 1.41E-53 | -1.69E-46 |
MS.gene050832 | MS.gene07612 | 0.812325 | 4.49E-51 | -1.69E-46 |
MS.gene050833 | MS.gene07612 | 0.822253 | 2.62E-53 | -1.69E-46 |
MS.gene050868 | MS.gene07612 | -0.832791 | 7.73E-56 | -1.69E-46 |
MS.gene050871 | MS.gene07612 | -0.830406 | 2.99E-55 | -1.69E-46 |
MS.gene050883 | MS.gene07612 | 0.811625 | 6.38E-51 | -1.69E-46 |
MS.gene050904 | MS.gene07612 | -0.806487 | 8.03E-50 | -1.69E-46 |
MS.gene050950 | MS.gene07612 | -0.838373 | 2.99E-57 | -1.69E-46 |
MS.gene050986 | MS.gene07612 | -0.831569 | 1.55E-55 | -1.69E-46 |
MS.gene05100 | MS.gene07612 | -0.815557 | 8.70E-52 | -1.69E-46 |
MS.gene051044 | MS.gene07612 | 0.812734 | 3.65E-51 | -1.69E-46 |
MS.gene05104 | MS.gene07612 | 0.848163 | 7.30E-60 | -1.69E-46 |
MS.gene051127 | MS.gene07612 | 0.828572 | 8.35E-55 | -1.69E-46 |
MS.gene051138 | MS.gene07612 | 0.828258 | 9.94E-55 | -1.69E-46 |
MS.gene051167 | MS.gene07612 | 0.813305 | 2.74E-51 | -1.69E-46 |
MS.gene051317 | MS.gene07612 | -0.833376 | 5.53E-56 | -1.69E-46 |
MS.gene051364 | MS.gene07612 | 0.871921 | 4.73E-67 | -1.69E-46 |
MS.gene051366 | MS.gene07612 | 0.856556 | 2.97E-62 | -1.69E-46 |
MS.gene051367 | MS.gene07612 | 0.827469 | 1.54E-54 | -1.69E-46 |
MS.gene051422 | MS.gene07612 | 0.825367 | 4.87E-54 | -1.69E-46 |
MS.gene051551 | MS.gene07612 | -0.809002 | 2.35E-50 | -1.69E-46 |
MS.gene051632 | MS.gene07612 | 0.804962 | 1.68E-49 | -1.69E-46 |
MS.gene051651 | MS.gene07612 | 0.840232 | 9.85E-58 | -1.69E-46 |
MS.gene051666 | MS.gene07612 | -0.80687 | 6.67E-50 | -1.69E-46 |
MS.gene051694 | MS.gene07612 | -0.837373 | 5.40E-57 | -1.69E-46 |
MS.gene051810 | MS.gene07612 | -0.821063 | 4.93E-53 | -1.69E-46 |
MS.gene051838 | MS.gene07612 | -0.823353 | 1.45E-53 | -1.69E-46 |
MS.gene051858 | MS.gene07612 | -0.83773 | 4.37E-57 | -1.69E-46 |
MS.gene051946 | MS.gene07612 | 0.808592 | 2.87E-50 | -1.69E-46 |
MS.gene051973 | MS.gene07612 | 0.816135 | 6.46E-52 | -1.69E-46 |
MS.gene052164 | MS.gene07612 | -0.848206 | 7.11E-60 | -1.69E-46 |
MS.gene052211 | MS.gene07612 | 0.818618 | 1.78E-52 | -1.69E-46 |
MS.gene05234 | MS.gene07612 | 0.821142 | 4.72E-53 | -1.69E-46 |
MS.gene05240 | MS.gene07612 | 0.826729 | 2.31E-54 | -1.69E-46 |
MS.gene052482 | MS.gene07612 | -0.84224 | 2.92E-58 | -1.69E-46 |
MS.gene052486 | MS.gene07612 | -0.855365 | 6.62E-62 | -1.69E-46 |
MS.gene052494 | MS.gene07612 | 0.801031 | 1.09E-48 | -1.69E-46 |
MS.gene052501 | MS.gene07612 | -0.810911 | 9.11E-51 | -1.69E-46 |
MS.gene052503 | MS.gene07612 | -0.853834 | 1.84E-61 | -1.69E-46 |
MS.gene052506 | MS.gene07612 | -0.834413 | 3.04E-56 | -1.69E-46 |
MS.gene052606 | MS.gene07612 | 0.805342 | 1.40E-49 | -1.69E-46 |
MS.gene052615 | MS.gene07612 | -0.833082 | 6.54E-56 | -1.69E-46 |
MS.gene052805 | MS.gene07612 | 0.801433 | 9.03E-49 | -1.69E-46 |
MS.gene052822 | MS.gene07612 | -0.836383 | 9.67E-57 | -1.69E-46 |
MS.gene052823 | MS.gene07612 | -0.856547 | 2.99E-62 | -1.69E-46 |
MS.gene052825 | MS.gene07612 | -0.854386 | 1.27E-61 | -1.69E-46 |
MS.gene052872 | MS.gene07612 | -0.804806 | 1.81E-49 | -1.69E-46 |
MS.gene052916 | MS.gene07612 | -0.829133 | 6.11E-55 | -1.69E-46 |
MS.gene052966 | MS.gene07612 | -0.803851 | 2.86E-49 | -1.69E-46 |
MS.gene053203 | MS.gene07612 | -0.853514 | 2.27E-61 | -1.69E-46 |
MS.gene053213 | MS.gene07612 | -0.855832 | 4.84E-62 | -1.69E-46 |
MS.gene053286 | MS.gene07612 | -0.849681 | 2.77E-60 | -1.69E-46 |
MS.gene053420 | MS.gene07612 | 0.880665 | 4.55E-70 | -1.69E-46 |
MS.gene053421 | MS.gene07612 | 0.840804 | 6.97E-58 | -1.69E-46 |
MS.gene053436 | MS.gene07612 | -0.848035 | 7.92E-60 | -1.69E-46 |
MS.gene053479 | MS.gene07612 | -0.821962 | 3.05E-53 | -1.69E-46 |
MS.gene053480 | MS.gene07612 | -0.807105 | 5.95E-50 | -1.69E-46 |
MS.gene053561 | MS.gene07612 | 0.812588 | 3.93E-51 | -1.69E-46 |
MS.gene053574 | MS.gene07612 | -0.851032 | 1.16E-60 | -1.69E-46 |
MS.gene053626 | MS.gene07612 | -0.801114 | 1.05E-48 | -1.69E-46 |
MS.gene053632 | MS.gene07612 | -0.840227 | 9.87E-58 | -1.69E-46 |
MS.gene053776 | MS.gene07612 | 0.800814 | 1.21E-48 | -1.69E-46 |
MS.gene053824 | MS.gene07612 | -0.848859 | 4.68E-60 | -1.69E-46 |
MS.gene053916 | MS.gene07612 | -0.822252 | 2.62E-53 | -1.69E-46 |
MS.gene054408 | MS.gene07612 | -0.806602 | 7.59E-50 | -1.69E-46 |
MS.gene054595 | MS.gene07612 | -0.835491 | 1.63E-56 | -1.69E-46 |
MS.gene054600 | MS.gene07612 | -0.806673 | 7.34E-50 | -1.69E-46 |
MS.gene054642 | MS.gene07612 | -0.863845 | 1.86E-64 | -1.69E-46 |
MS.gene054706 | MS.gene07612 | 0.86089 | 1.51E-63 | -1.69E-46 |
MS.gene054707 | MS.gene07612 | 0.824561 | 7.55E-54 | -1.69E-46 |
MS.gene054708 | MS.gene07612 | 0.804304 | 2.30E-49 | -1.69E-46 |
MS.gene05470 | MS.gene07612 | -0.847263 | 1.29E-59 | -1.69E-46 |
MS.gene054742 | MS.gene07612 | 0.801901 | 7.23E-49 | -1.69E-46 |
MS.gene054884 | MS.gene07612 | 0.804167 | 2.46E-49 | -1.69E-46 |
MS.gene054927 | MS.gene07612 | -0.801097 | 1.06E-48 | -1.69E-46 |
MS.gene054954 | MS.gene07612 | -0.856435 | 3.22E-62 | -1.69E-46 |
MS.gene054959 | MS.gene07612 | 0.832431 | 9.49E-56 | -1.69E-46 |
MS.gene05505 | MS.gene07612 | -0.80204 | 6.77E-49 | -1.69E-46 |
MS.gene055154 | MS.gene07612 | 0.865415 | 6.01E-65 | -1.69E-46 |
MS.gene055158 | MS.gene07612 | 0.820556 | 6.44E-53 | -1.69E-46 |
MS.gene055202 | MS.gene07612 | 0.811801 | 5.84E-51 | -1.69E-46 |
MS.gene055206 | MS.gene07612 | -0.838965 | 2.10E-57 | -1.69E-46 |
MS.gene055224 | MS.gene07612 | -0.80006 | 1.72E-48 | -1.69E-46 |
MS.gene055289 | MS.gene07612 | -0.818429 | 1.97E-52 | -1.69E-46 |
MS.gene055362 | MS.gene07612 | -0.873118 | 1.88E-67 | -1.69E-46 |
MS.gene055502 | MS.gene07612 | -0.882815 | 7.59E-71 | -1.69E-46 |
MS.gene055577 | MS.gene07612 | -0.866246 | 3.28E-65 | -1.69E-46 |
MS.gene055722 | MS.gene07612 | -0.803243 | 3.83E-49 | -1.69E-46 |
MS.gene055748 | MS.gene07612 | -0.826219 | 3.06E-54 | -1.69E-46 |
MS.gene055750 | MS.gene07612 | -0.822634 | 2.13E-53 | -1.69E-46 |
MS.gene055751 | MS.gene07612 | -0.822599 | 2.17E-53 | -1.69E-46 |
MS.gene05589 | MS.gene07612 | -0.858293 | 9.10E-63 | -1.69E-46 |
MS.gene055941 | MS.gene07612 | -0.832136 | 1.12E-55 | -1.69E-46 |
MS.gene055942 | MS.gene07612 | 0.804331 | 2.27E-49 | -1.69E-46 |
MS.gene055956 | MS.gene07612 | 0.801129 | 1.04E-48 | -1.69E-46 |
MS.gene056046 | MS.gene07612 | -0.811803 | 5.83E-51 | -1.69E-46 |
MS.gene056198 | MS.gene07612 | 0.808047 | 3.75E-50 | -1.69E-46 |
MS.gene056224 | MS.gene07612 | 0.825619 | 4.25E-54 | -1.69E-46 |
MS.gene056374 | MS.gene07612 | -0.80085 | 1.19E-48 | -1.69E-46 |
MS.gene056409 | MS.gene07612 | -0.800899 | 1.16E-48 | -1.69E-46 |
MS.gene056487 | MS.gene07612 | -0.812522 | 4.06E-51 | -1.69E-46 |
MS.gene056504 | MS.gene07612 | -0.871463 | 6.70E-67 | -1.69E-46 |
MS.gene056510 | MS.gene07612 | -0.822648 | 2.12E-53 | -1.69E-46 |
MS.gene056550 | MS.gene07612 | 0.814007 | 1.92E-51 | -1.69E-46 |
MS.gene056590 | MS.gene07612 | 0.820269 | 7.50E-53 | -1.69E-46 |
MS.gene056591 | MS.gene07612 | 0.820434 | 6.87E-53 | -1.69E-46 |
MS.gene056610 | MS.gene07612 | -0.811175 | 7.98E-51 | -1.69E-46 |
MS.gene056657 | MS.gene07612 | -0.87277 | 2.46E-67 | -1.69E-46 |
MS.gene056692 | MS.gene07612 | -0.858212 | 9.62E-63 | -1.69E-46 |
MS.gene056748 | MS.gene07612 | 0.81169 | 6.17E-51 | -1.69E-46 |
MS.gene056856 | MS.gene07612 | 0.844277 | 8.35E-59 | -1.69E-46 |
MS.gene056946 | MS.gene07612 | -0.808828 | 2.56E-50 | -1.69E-46 |
MS.gene057014 | MS.gene07612 | 0.803948 | 2.73E-49 | -1.69E-46 |
MS.gene057076 | MS.gene07612 | -0.801422 | 9.07E-49 | -1.69E-46 |
MS.gene057261 | MS.gene07612 | 0.841717 | 4.01E-58 | -1.69E-46 |
MS.gene057416 | MS.gene07612 | -0.836808 | 7.53E-57 | -1.69E-46 |
MS.gene057549 | MS.gene07612 | 0.801135 | 1.04E-48 | -1.69E-46 |
MS.gene057658 | MS.gene07612 | -0.828724 | 7.67E-55 | -1.69E-46 |
MS.gene057768 | MS.gene07612 | 0.806321 | 8.70E-50 | -1.69E-46 |
MS.gene057831 | MS.gene07612 | -0.861228 | 1.19E-63 | -1.69E-46 |
MS.gene058019 | MS.gene07612 | -0.806049 | 9.93E-50 | -1.69E-46 |
MS.gene058067 | MS.gene07612 | 0.816001 | 6.93E-52 | -1.69E-46 |
MS.gene058068 | MS.gene07612 | 0.828567 | 8.37E-55 | -1.69E-46 |
MS.gene058099 | MS.gene07612 | 0.824892 | 6.31E-54 | -1.69E-46 |
MS.gene058111 | MS.gene07612 | 0.81135 | 7.32E-51 | -1.69E-46 |
MS.gene058117 | MS.gene07612 | 0.80663 | 7.49E-50 | -1.69E-46 |
MS.gene058157 | MS.gene07612 | -0.843662 | 1.22E-58 | -1.69E-46 |
MS.gene058171 | MS.gene07612 | 0.801956 | 7.05E-49 | -1.69E-46 |
MS.gene058175 | MS.gene07612 | 0.80085 | 1.19E-48 | -1.69E-46 |
MS.gene058268 | MS.gene07612 | 0.844921 | 5.60E-59 | -1.69E-46 |
MS.gene058269 | MS.gene07612 | 0.852901 | 3.40E-61 | -1.69E-46 |
MS.gene058334 | MS.gene07612 | 0.847306 | 1.26E-59 | -1.69E-46 |
MS.gene058338 | MS.gene07612 | -0.840599 | 7.89E-58 | -1.69E-46 |
MS.gene05837 | MS.gene07612 | -0.859726 | 3.39E-63 | -1.69E-46 |
MS.gene058382 | MS.gene07612 | 0.826884 | 2.12E-54 | -1.69E-46 |
MS.gene058419 | MS.gene07612 | -0.877249 | 7.31E-69 | -1.69E-46 |
MS.gene058544 | MS.gene07612 | -0.866489 | 2.75E-65 | -1.69E-46 |
MS.gene058603 | MS.gene07612 | 0.8363 | 1.01E-56 | -1.69E-46 |
MS.gene058723 | MS.gene07612 | -0.822324 | 2.52E-53 | -1.69E-46 |
MS.gene058773 | MS.gene07612 | -0.829751 | 4.32E-55 | -1.69E-46 |
MS.gene058838 | MS.gene07612 | -0.867078 | 1.78E-65 | -1.69E-46 |
MS.gene05883 | MS.gene07612 | -0.848482 | 5.96E-60 | -1.69E-46 |
MS.gene059022 | MS.gene07612 | -0.866564 | 2.60E-65 | -1.69E-46 |
MS.gene059023 | MS.gene07612 | -0.865347 | 6.31E-65 | -1.69E-46 |
MS.gene059029 | MS.gene07612 | -0.803617 | 3.20E-49 | -1.69E-46 |
MS.gene05913 | MS.gene07612 | -0.81584 | 7.52E-52 | -1.69E-46 |
MS.gene05914 | MS.gene07612 | -0.814548 | 1.46E-51 | -1.69E-46 |
MS.gene05934 | MS.gene07612 | -0.823427 | 1.39E-53 | -1.69E-46 |
MS.gene059367 | MS.gene07612 | -0.8035 | 3.39E-49 | -1.69E-46 |
MS.gene059667 | MS.gene07612 | -0.804887 | 1.74E-49 | -1.69E-46 |
MS.gene059677 | MS.gene07612 | -0.876316 | 1.54E-68 | -1.69E-46 |
MS.gene059699 | MS.gene07612 | 0.823052 | 1.70E-53 | -1.69E-46 |
MS.gene059703 | MS.gene07612 | 0.831754 | 1.40E-55 | -1.69E-46 |
MS.gene059718 | MS.gene07612 | -0.868901 | 4.63E-66 | -1.69E-46 |
MS.gene059756 | MS.gene07612 | -0.837742 | 4.34E-57 | -1.69E-46 |
MS.gene059801 | MS.gene07612 | -0.804169 | 2.46E-49 | -1.69E-46 |
MS.gene059865 | MS.gene07612 | -0.846034 | 2.80E-59 | -1.69E-46 |
MS.gene059902 | MS.gene07612 | -0.836565 | 8.68E-57 | -1.69E-46 |
MS.gene059953 | MS.gene07612 | 0.820407 | 6.97E-53 | -1.69E-46 |
MS.gene059955 | MS.gene07612 | 0.82505 | 5.79E-54 | -1.69E-46 |
MS.gene06000 | MS.gene07612 | -0.821954 | 3.07E-53 | -1.69E-46 |
MS.gene060205 | MS.gene07612 | 0.800521 | 1.39E-48 | -1.69E-46 |
MS.gene060405 | MS.gene07612 | 0.82946 | 5.08E-55 | -1.69E-46 |
MS.gene060482 | MS.gene07612 | -0.822609 | 2.16E-53 | -1.69E-46 |
MS.gene060593 | MS.gene07612 | 0.818163 | 2.26E-52 | -1.69E-46 |
MS.gene060595 | MS.gene07612 | 0.82956 | 4.81E-55 | -1.69E-46 |
MS.gene060703 | MS.gene07612 | -0.824083 | 9.78E-54 | -1.69E-46 |
MS.gene060762 | MS.gene07612 | -0.850429 | 1.71E-60 | -1.69E-46 |
MS.gene060778 | MS.gene07612 | -0.830093 | 3.57E-55 | -1.69E-46 |
MS.gene06077 | MS.gene07612 | -0.878962 | 1.84E-69 | -1.69E-46 |
MS.gene060823 | MS.gene07612 | 0.823184 | 1.59E-53 | -1.69E-46 |
MS.gene060835 | MS.gene07612 | -0.818826 | 1.60E-52 | -1.69E-46 |
MS.gene06092 | MS.gene07612 | -0.840995 | 6.21E-58 | -1.69E-46 |
MS.gene060982 | MS.gene07612 | -0.858745 | 6.67E-63 | -1.69E-46 |
MS.gene061044 | MS.gene07612 | 0.804786 | 1.83E-49 | -1.69E-46 |
MS.gene061150 | MS.gene07612 | -0.842337 | 2.75E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07612.t1 | MTR_1g079810 | 97.411 | 309 | 3 | 3 | 1 | 308 | 1 | 305 | 0.0 | 591 |
MS.gene07612.t1 | MTR_1g073860 | 54.430 | 316 | 110 | 10 | 1 | 308 | 33 | 322 | 9.02e-76 | 235 |
MS.gene07612.t1 | MTR_1g044155 | 63.556 | 225 | 77 | 4 | 1 | 224 | 55 | 275 | 7.70e-75 | 234 |
MS.gene07612.t1 | MTR_5g091630 | 62.963 | 162 | 60 | 0 | 73 | 234 | 45 | 206 | 2.74e-63 | 201 |
MS.gene07612.t1 | MTR_5g011520 | 63.158 | 190 | 63 | 1 | 46 | 228 | 64 | 253 | 8.34e-63 | 202 |
MS.gene07612.t1 | MTR_8g036060 | 71.084 | 166 | 48 | 0 | 75 | 240 | 86 | 251 | 5.05e-62 | 199 |
MS.gene07612.t1 | MTR_3g068035 | 66.667 | 153 | 45 | 1 | 85 | 237 | 89 | 235 | 7.09e-60 | 194 |
MS.gene07612.t1 | MTR_7g080980 | 62.500 | 152 | 57 | 0 | 84 | 235 | 66 | 217 | 2.71e-56 | 183 |
MS.gene07612.t1 | MTR_4g098450 | 63.087 | 149 | 55 | 0 | 82 | 230 | 83 | 231 | 1.68e-52 | 174 |
MS.gene07612.t1 | MTR_3g100470 | 41.778 | 225 | 122 | 4 | 24 | 244 | 26 | 245 | 1.08e-51 | 172 |
MS.gene07612.t1 | MTR_5g080580 | 60.452 | 177 | 68 | 1 | 48 | 224 | 64 | 238 | 4.50e-51 | 171 |
MS.gene07612.t1 | MTR_5g066020 | 42.775 | 173 | 90 | 4 | 84 | 251 | 60 | 228 | 5.07e-39 | 138 |
MS.gene07612.t1 | MTR_5g089600 | 33.951 | 162 | 96 | 3 | 72 | 222 | 74 | 235 | 1.77e-24 | 99.4 |
MS.gene07612.t1 | MTR_4g057487 | 32.941 | 170 | 104 | 2 | 72 | 231 | 14 | 183 | 3.43e-24 | 98.6 |
MS.gene07612.t1 | MTR_5g010330 | 36.207 | 174 | 98 | 5 | 70 | 231 | 99 | 271 | 3.58e-23 | 97.8 |
MS.gene07612.t1 | MTR_1g079780 | 41.912 | 136 | 75 | 2 | 84 | 215 | 88 | 223 | 8.43e-23 | 96.7 |
MS.gene07612.t1 | MTR_4g057525 | 31.176 | 170 | 107 | 2 | 68 | 227 | 29 | 198 | 1.60e-21 | 91.7 |
MS.gene07612.t1 | MTR_7g116320 | 46.903 | 113 | 60 | 0 | 102 | 214 | 143 | 255 | 1.62e-20 | 90.9 |
MS.gene07612.t1 | MTR_1g073870 | 43.791 | 153 | 39 | 4 | 70 | 222 | 47 | 152 | 1.84e-20 | 88.2 |
MS.gene07612.t1 | MTR_1g053685 | 30.952 | 168 | 107 | 1 | 72 | 230 | 82 | 249 | 4.91e-20 | 88.2 |
MS.gene07612.t1 | MTR_1g061530 | 44.348 | 115 | 58 | 3 | 105 | 214 | 144 | 257 | 1.45e-19 | 88.2 |
MS.gene07612.t1 | MTR_7g116320 | 44.800 | 125 | 65 | 1 | 102 | 222 | 143 | 267 | 1.81e-19 | 86.7 |
MS.gene07612.t1 | MTR_1g032910 | 32.203 | 177 | 104 | 4 | 69 | 231 | 95 | 269 | 3.65e-19 | 86.3 |
MS.gene07612.t1 | MTR_6g061670 | 39.655 | 116 | 67 | 1 | 102 | 214 | 130 | 245 | 2.37e-18 | 84.3 |
MS.gene07612.t1 | MTR_7g077120 | 37.297 | 185 | 97 | 5 | 67 | 235 | 119 | 300 | 2.72e-18 | 84.3 |
MS.gene07612.t1 | MTR_6g061670 | 39.655 | 116 | 67 | 1 | 102 | 214 | 125 | 240 | 3.24e-18 | 83.6 |
MS.gene07612.t1 | MTR_5g089700 | 30.128 | 156 | 100 | 3 | 73 | 219 | 73 | 228 | 6.76e-17 | 78.6 |
MS.gene07612.t1 | MTR_5g089090 | 32.515 | 163 | 98 | 2 | 68 | 221 | 21 | 180 | 7.93e-17 | 77.8 |
MS.gene07612.t1 | MTR_1g076710 | 41.379 | 116 | 64 | 2 | 102 | 214 | 134 | 248 | 7.11e-16 | 77.4 |
MS.gene07612.t1 | MTR_8g036160 | 41.228 | 114 | 63 | 1 | 105 | 214 | 145 | 258 | 1.97e-15 | 76.3 |
MS.gene07612.t1 | MTR_4g055813 | 35.156 | 128 | 81 | 2 | 101 | 226 | 18 | 145 | 2.03e-15 | 75.5 |
MS.gene07612.t1 | MTR_4g055803 | 37.008 | 127 | 68 | 3 | 105 | 222 | 128 | 251 | 6.95e-15 | 75.1 |
MS.gene07612.t1 | MTR_8g098390 | 32.000 | 150 | 91 | 4 | 93 | 233 | 157 | 304 | 1.03e-14 | 73.9 |
MS.gene07612.t1 | MTR_7g074935 | 47.761 | 67 | 35 | 0 | 105 | 171 | 130 | 196 | 1.39e-14 | 73.6 |
MS.gene07612.t1 | MTR_4g098460 | 33.553 | 152 | 76 | 5 | 75 | 214 | 57 | 195 | 1.69e-14 | 72.8 |
MS.gene07612.t1 | MTR_8g031100 | 37.576 | 165 | 95 | 3 | 75 | 231 | 125 | 289 | 2.30e-14 | 73.2 |
MS.gene07612.t1 | MTR_4g069110 | 36.842 | 95 | 60 | 0 | 73 | 167 | 32 | 126 | 6.41e-14 | 68.9 |
MS.gene07612.t1 | MTR_8g078930 | 32.593 | 135 | 81 | 3 | 106 | 231 | 5 | 138 | 1.13e-13 | 68.2 |
MS.gene07612.t1 | MTR_4g055833 | 38.211 | 123 | 64 | 3 | 101 | 214 | 121 | 240 | 1.65e-13 | 70.5 |
MS.gene07612.t1 | MTR_5g011620 | 33.945 | 109 | 70 | 1 | 106 | 214 | 119 | 225 | 2.76e-13 | 70.9 |
MS.gene07612.t1 | MTR_5g011610 | 33.333 | 117 | 75 | 2 | 106 | 221 | 62 | 176 | 1.30e-12 | 67.8 |
MS.gene07612.t1 | MTR_4g098460 | 32.484 | 157 | 76 | 6 | 75 | 214 | 57 | 200 | 1.91e-12 | 67.0 |
MS.gene07612.t1 | MTR_5g011680 | 32.258 | 124 | 77 | 2 | 105 | 221 | 145 | 268 | 5.19e-12 | 65.5 |
MS.gene07612.t1 | MTR_4g101990 | 40.299 | 67 | 40 | 0 | 105 | 171 | 147 | 213 | 2.15e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07612.t1 | AT4G14465 | 50.629 | 318 | 110 | 10 | 1 | 308 | 1 | 281 | 3.41e-79 | 242 |
MS.gene07612.t1 | AT3G04570 | 61.603 | 237 | 78 | 3 | 1 | 224 | 1 | 237 | 3.48e-79 | 243 |
MS.gene07612.t1 | AT1G76500 | 59.259 | 189 | 63 | 2 | 47 | 226 | 49 | 232 | 7.91e-65 | 206 |
MS.gene07612.t1 | AT2G35270 | 64.744 | 156 | 55 | 0 | 75 | 230 | 78 | 233 | 2.46e-62 | 199 |
MS.gene07612.t1 | AT2G42940 | 59.770 | 174 | 65 | 1 | 75 | 243 | 53 | 226 | 4.25e-61 | 195 |
MS.gene07612.t1 | AT3G60870 | 60.927 | 151 | 57 | 1 | 69 | 219 | 53 | 201 | 6.62e-58 | 187 |
MS.gene07612.t1 | AT2G45430 | 67.251 | 171 | 51 | 3 | 71 | 237 | 85 | 254 | 1.33e-57 | 188 |
MS.gene07612.t1 | AT4G22810 | 51.471 | 272 | 111 | 7 | 41 | 308 | 70 | 324 | 1.10e-56 | 186 |
MS.gene07612.t1 | AT4G12050 | 66.456 | 158 | 52 | 1 | 74 | 230 | 117 | 274 | 5.68e-56 | 184 |
MS.gene07612.t1 | AT4G17800 | 64.138 | 145 | 52 | 0 | 84 | 228 | 91 | 235 | 3.13e-53 | 176 |
MS.gene07612.t1 | AT3G55560 | 48.963 | 241 | 103 | 5 | 1 | 224 | 1 | 238 | 7.03e-52 | 173 |
MS.gene07612.t1 | AT5G49700 | 43.192 | 213 | 106 | 5 | 74 | 276 | 55 | 262 | 5.22e-50 | 167 |
MS.gene07612.t1 | AT4G35390 | 66.000 | 150 | 49 | 1 | 75 | 222 | 63 | 212 | 7.05e-50 | 167 |
MS.gene07612.t1 | AT1G20900 | 55.497 | 191 | 70 | 2 | 49 | 224 | 54 | 244 | 7.67e-49 | 165 |
MS.gene07612.t1 | AT1G14490 | 43.956 | 182 | 85 | 5 | 76 | 242 | 6 | 185 | 4.70e-39 | 137 |
MS.gene07612.t1 | AT1G14490 | 43.956 | 182 | 85 | 5 | 76 | 242 | 25 | 204 | 7.05e-39 | 137 |
MS.gene07612.t1 | AT4G25320 | 44.248 | 113 | 60 | 1 | 105 | 214 | 169 | 281 | 1.51e-21 | 94.4 |
MS.gene07612.t1 | AT5G51590 | 43.363 | 113 | 61 | 1 | 105 | 214 | 181 | 293 | 1.78e-21 | 94.4 |
MS.gene07612.t1 | AT5G62260 | 39.516 | 124 | 72 | 1 | 102 | 222 | 160 | 283 | 2.27e-21 | 92.0 |
MS.gene07612.t1 | AT3G04590 | 31.754 | 211 | 121 | 4 | 105 | 306 | 174 | 370 | 3.83e-21 | 93.2 |
MS.gene07612.t1 | AT1G63470 | 39.726 | 146 | 81 | 3 | 75 | 214 | 147 | 291 | 4.13e-21 | 92.8 |
MS.gene07612.t1 | AT4G12080 | 41.739 | 115 | 60 | 2 | 105 | 214 | 173 | 285 | 5.37e-21 | 92.0 |
MS.gene07612.t1 | AT3G04590 | 36.232 | 138 | 76 | 1 | 105 | 242 | 174 | 299 | 3.26e-20 | 89.4 |
MS.gene07612.t1 | AT5G62260 | 40.517 | 116 | 66 | 1 | 102 | 214 | 160 | 275 | 4.18e-20 | 90.1 |
MS.gene07612.t1 | AT5G62260 | 40.517 | 116 | 66 | 1 | 102 | 214 | 160 | 275 | 4.18e-20 | 90.1 |
MS.gene07612.t1 | AT2G45850 | 35.948 | 153 | 92 | 3 | 68 | 214 | 125 | 277 | 1.82e-19 | 87.8 |
MS.gene07612.t1 | AT2G45850 | 35.948 | 153 | 92 | 3 | 68 | 214 | 125 | 277 | 1.82e-19 | 87.8 |
MS.gene07612.t1 | AT2G45850 | 36.364 | 154 | 92 | 3 | 68 | 215 | 125 | 278 | 4.52e-19 | 85.5 |
MS.gene07612.t1 | AT4G17950 | 37.500 | 192 | 100 | 6 | 75 | 261 | 196 | 372 | 6.61e-19 | 87.0 |
MS.gene07612.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 76 | 214 | 138 | 278 | 4.07e-18 | 84.0 |
MS.gene07612.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 76 | 214 | 138 | 278 | 4.07e-18 | 84.0 |
MS.gene07612.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 76 | 214 | 138 | 278 | 4.07e-18 | 84.0 |
MS.gene07612.t1 | AT2G33620 | 38.028 | 142 | 84 | 3 | 76 | 214 | 138 | 278 | 4.07e-18 | 84.0 |
MS.gene07612.t1 | AT4G00200 | 39.850 | 133 | 66 | 2 | 105 | 234 | 126 | 247 | 1.68e-14 | 73.2 |
MS.gene07612.t1 | AT4G00200 | 39.850 | 133 | 66 | 2 | 105 | 234 | 126 | 247 | 1.68e-14 | 73.2 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 130 | 274 | 3.95e-14 | 72.4 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 130 | 274 | 3.95e-14 | 72.4 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 124 | 268 | 4.79e-14 | 72.4 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 124 | 268 | 4.79e-14 | 72.4 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 124 | 268 | 4.79e-14 | 72.4 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 124 | 268 | 4.79e-14 | 72.4 |
MS.gene07612.t1 | AT1G63480 | 32.192 | 146 | 92 | 3 | 75 | 214 | 124 | 268 | 4.79e-14 | 72.4 |
MS.gene07612.t1 | AT5G46640 | 41.379 | 145 | 78 | 3 | 74 | 214 | 154 | 295 | 2.27e-13 | 70.5 |
MS.gene07612.t1 | AT3G61310 | 34.459 | 148 | 91 | 3 | 73 | 214 | 132 | 279 | 2.97e-12 | 67.0 |
MS.gene07612.t1 | AT4G22770 | 39.823 | 113 | 65 | 1 | 105 | 214 | 153 | 265 | 3.80e-12 | 66.6 |
MS.gene07612.t1 | AT4G22770 | 39.823 | 113 | 65 | 1 | 105 | 214 | 153 | 265 | 3.80e-12 | 66.6 |
Find 121 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGACTATTTATCTTTC+TGG | 0.085538 | 1.3:-56529446 | MS.gene07612:CDS |
GGAGCTATGGTGGCGCTTCC+TGG | 0.123030 | 1.3:-56529533 | MS.gene07612:CDS |
TAACAATGTTGGTGGTAATT+TGG | 0.176970 | 1.3:-56529174 | MS.gene07612:CDS |
GGGCATCAAGGTGGTGGTGG+TGG | 0.274335 | 1.3:-56529290 | MS.gene07612:CDS |
GTTAATTAGTATACTTAGTA+TGG | 0.281421 | 1.3:+56529065 | None:intergenic |
CATCAAGGTGGTGGTGGTGG+TGG | 0.310580 | 1.3:-56529287 | MS.gene07612:CDS |
TGTTACAGCACTTTGGTTCA+TGG | 0.311013 | 1.3:+56529889 | None:intergenic |
AACCTGATGGACGGCCTCTT+GGG | 0.312471 | 1.3:+56529756 | None:intergenic |
GTTATGAATATCGGTGGTTT+TGG | 0.313396 | 1.3:+56529722 | None:intergenic |
GGCCGGGCCGGTTATGTTGA+TGG | 0.324168 | 1.3:-56529375 | MS.gene07612:CDS |
TCCACTAGGAAAACCGGATC+TGG | 0.327318 | 1.3:-56529918 | MS.gene07612:CDS |
GAACCTGATGGACGGCCTCT+TGG | 0.345631 | 1.3:+56529755 | None:intergenic |
ACATGGCTTCGTAGCGCGTT+AGG | 0.352279 | 1.3:+56529689 | None:intergenic |
TTGACCGGTTCAGTGCTTCC+TGG | 0.357484 | 1.3:-56529491 | MS.gene07612:CDS |
AACAATGTTGGTGGTAATTT+GGG | 0.370360 | 1.3:-56529173 | MS.gene07612:CDS |
CCTTCACCGCCGGGAGCTAC+TGG | 0.381049 | 1.3:-56529467 | MS.gene07612:CDS |
GGTAATTTGGGTGTTTCAAA+TGG | 0.389870 | 1.3:-56529161 | MS.gene07612:CDS |
CTATCTCTTGTTATGAATAT+CGG | 0.390991 | 1.3:+56529713 | None:intergenic |
TCCACTTGTGGCGGCCGGGC+CGG | 0.400817 | 1.3:-56529387 | MS.gene07612:CDS |
GTTGGTCCACTTGTGGCGGC+CGG | 0.404963 | 1.3:-56529392 | MS.gene07612:CDS |
ATGAACCAAAGTGCTGTAAC+AGG | 0.409806 | 1.3:-56529887 | MS.gene07612:CDS |
TGGACCGGACCGGTTGGTCT+AGG | 0.409931 | 1.3:-56529968 | MS.gene07612:CDS |
CGCCCAAGAGGCCGTCCATC+AGG | 0.416707 | 1.3:-56529758 | MS.gene07612:CDS |
TCCGACGCGTGCCGCGGGGA+TGG | 0.423656 | 1.3:-56529249 | MS.gene07612:CDS |
CAGTTAGCAATTGGATCTGT+TGG | 0.425855 | 1.3:-56529224 | MS.gene07612:CDS |
GAGCTATGGTGGCGCTTCCT+GGG | 0.429894 | 1.3:-56529532 | MS.gene07612:CDS |
GAGTCTCCGACGCGTGCCGC+GGG | 0.430495 | 1.3:-56529254 | MS.gene07612:CDS |
CTCCTCTCCACTAGGAAAAC+CGG | 0.439999 | 1.3:-56529924 | MS.gene07612:CDS |
ACTCAACTTTGATGGCAAAC+AGG | 0.443330 | 1.3:-56529994 | None:intergenic |
CCGACGCGTGCCGCGGGGAT+GGG | 0.452814 | 1.3:-56529248 | MS.gene07612:CDS |
AGGAAGCGCCACCATAGCTC+CGG | 0.468113 | 1.3:+56529535 | None:intergenic |
GTGGTTGGCGGTGGTGTGGT+TGG | 0.473855 | 1.3:-56529410 | MS.gene07612:CDS |
GTATGAGAGGCTGCCGGTTG+AGG | 0.473968 | 1.3:-56529330 | MS.gene07612:CDS |
GGGATGGGACAGTTAGCAAT+TGG | 0.474463 | 1.3:-56529233 | MS.gene07612:CDS |
GAAGGGCATCAAGGTGGTGG+TGG | 0.477044 | 1.3:-56529293 | MS.gene07612:CDS |
CCCTCCTAGACCAACCGGTC+CGG | 0.477578 | 1.3:+56529964 | None:intergenic |
CTGTCGTTAACGTTTCTCTT+CGG | 0.480165 | 1.3:-56529571 | MS.gene07612:CDS |
GCTTCCTGGACCTTCACCGC+CGG | 0.480251 | 1.3:-56529477 | MS.gene07612:CDS |
TCCATCCCTCCTAGACCAAC+CGG | 0.482993 | 1.3:+56529959 | None:intergenic |
GTTTCTCTTCGGCAACCTAC+AGG | 0.485903 | 1.3:-56529560 | MS.gene07612:CDS |
CTTCCTGGACCTTCACCGCC+GGG | 0.487921 | 1.3:-56529476 | MS.gene07612:CDS |
TGATCATCACCATCCTCAAC+CGG | 0.488150 | 1.3:+56529317 | None:intergenic |
ACCTACAGGTCCCGGAGCTA+TGG | 0.490105 | 1.3:-56529546 | MS.gene07612:CDS |
GTTGCCGCCATCAACATAAC+CGG | 0.494758 | 1.3:+56529368 | None:intergenic |
CCAGTAGCTCCCGGCGGTGA+AGG | 0.497293 | 1.3:+56529467 | None:intergenic |
AGGTCCAGGAAGCACTGAAC+CGG | 0.501544 | 1.3:+56529487 | None:intergenic |
ATGAAGCTTATAATTCTCCC+TGG | 0.502086 | 1.3:-56529112 | MS.gene07612:CDS |
TTGGTCCACTTGTGGCGGCC+GGG | 0.506396 | 1.3:-56529391 | MS.gene07612:CDS |
TTCATGGAGAAACCCAGATC+CGG | 0.506944 | 1.3:+56529905 | None:intergenic |
CAGGAAGGGCATCAAGGTGG+TGG | 0.509483 | 1.3:-56529296 | MS.gene07612:CDS |
TGAAGCTTATAATTCTCCCT+GGG | 0.512515 | 1.3:-56529111 | MS.gene07612:CDS |
CCCATCCCCGCGGCACGCGT+CGG | 0.513325 | 1.3:+56529248 | None:intergenic |
CATGGCTTCGTAGCGCGTTA+GGG | 0.516021 | 1.3:+56529690 | None:intergenic |
CCCTGGGGTCATGCTAGTCA+TGG | 0.516025 | 1.3:-56529095 | MS.gene07612:CDS |
GCTCCCGGCGGTGAAGGTCC+AGG | 0.516377 | 1.3:+56529473 | None:intergenic |
ACCGGCCCGGCCGCCACAAG+TGG | 0.517030 | 1.3:+56529386 | None:intergenic |
CCACCAACATTGTTATAGCC+TGG | 0.521278 | 1.3:+56529182 | None:intergenic |
AAACAGGTGGTGGACCGGAC+CGG | 0.521308 | 1.3:-56529978 | MS.gene07612:CDS |
CTTTGATGGCAAACAGGTGG+TGG | 0.523292 | 1.3:-56529988 | None:intergenic |
ACCTCCACGCGCCGCCCAAG+AGG | 0.524400 | 1.3:-56529770 | MS.gene07612:CDS |
GCAATTGGATCTGTTGGAGA+AGG | 0.525138 | 1.3:-56529218 | MS.gene07612:CDS |
CGAGTCTCCGACGCGTGCCG+CGG | 0.526236 | 1.3:-56529255 | MS.gene07612:CDS |
TTACTCCTGTTACAGCACTT+TGG | 0.526257 | 1.3:+56529882 | None:intergenic |
ACCATGACTAGCATGACCCC+AGG | 0.526448 | 1.3:+56529094 | None:intergenic |
CGCCATCAACATAACCGGCC+CGG | 0.529330 | 1.3:+56529373 | None:intergenic |
GGTTGAGGATGGTGATGATC+AGG | 0.530058 | 1.3:-56529315 | MS.gene07612:CDS |
ACGGCCTCTTGGGCGGCGCG+TGG | 0.532452 | 1.3:+56529766 | None:intergenic |
CATGTCATGGAAGTAGCATC+AGG | 0.533990 | 1.3:-56529671 | MS.gene07612:CDS |
TTTGATATACTCTCTTTGAC+CGG | 0.534621 | 1.3:-56529506 | MS.gene07612:CDS |
GCCTCTTGGGCGGCGCGTGG+AGG | 0.535225 | 1.3:+56529769 | None:intergenic |
CTGATGCTACTTCCATGACA+TGG | 0.535449 | 1.3:+56529672 | None:intergenic |
CTTCGGCAACCTACAGGTCC+CGG | 0.535710 | 1.3:-56529554 | MS.gene07612:CDS |
CGCGCTACGAAGCCATGTCA+TGG | 0.542213 | 1.3:-56529684 | MS.gene07612:CDS |
ACCGGACCGGTTGGTCTAGG+AGG | 0.542357 | 1.3:-56529965 | MS.gene07612:CDS |
GGAAGCGCCACCATAGCTCC+GGG | 0.544398 | 1.3:+56529536 | None:intergenic |
TTTCGAATGCGACGTATGAG+AGG | 0.546898 | 1.3:-56529343 | MS.gene07612:CDS |
TGGTGTGGTTGGTCCACTTG+TGG | 0.553800 | 1.3:-56529399 | MS.gene07612:CDS |
CCACTAGGAAAACCGGATCT+GGG | 0.555591 | 1.3:-56529917 | MS.gene07612:CDS |
ATGGCAAACAGGTGGTGGAC+CGG | 0.556090 | 1.3:-56529983 | MS.gene07612:CDS |
CAAGGACAAGTGGTTGGCGG+TGG | 0.556749 | 1.3:-56529419 | MS.gene07612:CDS |
ATTTATCTTTCTGGAGGACA+AGG | 0.556764 | 1.3:-56529437 | MS.gene07612:CDS |
ACCGGTTGGTCTAGGAGGGA+TGG | 0.562112 | 1.3:-56529960 | MS.gene07612:CDS |
TACAGGTCCCGGAGCTATGG+TGG | 0.562505 | 1.3:-56529543 | MS.gene07612:CDS |
CCGGACCGGTTGGTCTAGGA+GGG | 0.566185 | 1.3:-56529964 | MS.gene07612:CDS |
CCAGGCTATAACAATGTTGG+TGG | 0.566237 | 1.3:-56529182 | MS.gene07612:CDS |
TTGACTATTTATCTTTCTGG+AGG | 0.567765 | 1.3:-56529443 | MS.gene07612:CDS |
CCACCAGGCTATAACAATGT+TGG | 0.572328 | 1.3:-56529185 | MS.gene07612:CDS |
GGACAAGGACAAGTGGTTGG+CGG | 0.574410 | 1.3:-56529422 | MS.gene07612:CDS |
AATTTGGGTGTTTCAAATGG+AGG | 0.577814 | 1.3:-56529158 | MS.gene07612:CDS |
AGCGACGAACACAAAGGAGG+TGG | 0.581244 | 1.3:-56529806 | MS.gene07612:CDS |
ACAAGTGGTTGGCGGTGGTG+TGG | 0.585162 | 1.3:-56529414 | MS.gene07612:CDS |
GATGATCAGGAAGGGCATCA+AGG | 0.592117 | 1.3:-56529302 | MS.gene07612:CDS |
TCAGTAACCTCCTCTCCACT+AGG | 0.593822 | 1.3:-56529932 | MS.gene07612:CDS |
ATAGTCAAACCAGTAGCTCC+CGG | 0.594640 | 1.3:+56529458 | None:intergenic |
GGAGGACAAGGACAAGTGGT+TGG | 0.595598 | 1.3:-56529425 | MS.gene07612:CDS |
AATTAGTATACTTAGTATGG+TGG | 0.597096 | 1.3:+56529068 | None:intergenic |
ATTTGCATTCTAAGCGCAAG+TGG | 0.597435 | 1.3:-56529596 | MS.gene07612:CDS |
CTGATGGACGGCCTCTTGGG+CGG | 0.597863 | 1.3:+56529759 | None:intergenic |
GAGAGGCTGCCGGTTGAGGA+TGG | 0.598538 | 1.3:-56529326 | MS.gene07612:CDS |
TCTCTTGTTATGAATATCGG+TGG | 0.603718 | 1.3:+56529716 | None:intergenic |
TTCTGGAGGACAAGGACAAG+TGG | 0.603921 | 1.3:-56529429 | MS.gene07612:CDS |
ACCATAGCTCCGGGACCTGT+AGG | 0.618743 | 1.3:+56529545 | None:intergenic |
AGGTGGTGGACCGGACCGGT+TGG | 0.621643 | 1.3:-56529974 | MS.gene07612:CDS |
GAGAGTATATCAAATCTCCC+AGG | 0.628363 | 1.3:+56529515 | None:intergenic |
TGTGGTTGGTCCACTTGTGG+CGG | 0.637462 | 1.3:-56529396 | MS.gene07612:CDS |
GAAGGTTCTTCAATTCCACC+AGG | 0.641251 | 1.3:-56529200 | MS.gene07612:CDS |
GAGGATGGTGATGATCAGGA+AGG | 0.642087 | 1.3:-56529311 | MS.gene07612:CDS |
GAAAACAGCGACGAACACAA+AGG | 0.642908 | 1.3:-56529812 | MS.gene07612:CDS |
AGGATGGTGATGATCAGGAA+GGG | 0.650071 | 1.3:-56529310 | MS.gene07612:CDS |
AGTCTCCGACGCGTGCCGCG+GGG | 0.661832 | 1.3:-56529253 | MS.gene07612:CDS |
AACAGCGACGAACACAAAGG+AGG | 0.671516 | 1.3:-56529809 | MS.gene07612:CDS |
CAACTTTGATGGCAAACAGG+TGG | 0.677591 | 1.3:-56529991 | None:intergenic |
CGGGCCGGTTATGTTGATGG+CGG | 0.680553 | 1.3:-56529372 | MS.gene07612:CDS |
TGCGACGTATGAGAGGCTGC+CGG | 0.686290 | 1.3:-56529336 | MS.gene07612:CDS |
CCAACATTGTTATAGCCTGG+TGG | 0.688924 | 1.3:+56529185 | None:intergenic |
CCATGACTAGCATGACCCCA+GGG | 0.694474 | 1.3:+56529095 | None:intergenic |
TGCTAACTGTCCCATCCCCG+CGG | 0.697320 | 1.3:+56529238 | None:intergenic |
GATCAGGAAGGGCATCAAGG+TGG | 0.707265 | 1.3:-56529299 | MS.gene07612:CDS |
TTTGCAAGAAAACGACAGAG+AGG | 0.730654 | 1.3:-56529620 | MS.gene07612:CDS |
GAAGCTTATAATTCTCCCTG+GGG | 0.741712 | 1.3:-56529110 | MS.gene07612:CDS |
GTCAAACCAGTAGCTCCCGG+CGG | 0.770924 | 1.3:+56529461 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATCTCTTGTTATGAATAT+CGG | + | chr1.3:56529352-56529371 | None:intergenic | 25.0% |
GGTTTGACTATTTATCTTTC+TGG | - | chr1.3:56529616-56529635 | MS.gene07612:CDS | 30.0% | |
TTGACTATTTATCTTTCTGG+AGG | - | chr1.3:56529619-56529638 | MS.gene07612:CDS | 30.0% | |
TTTGATATACTCTCTTTGAC+CGG | - | chr1.3:56529556-56529575 | MS.gene07612:CDS | 30.0% | |
!! | AACAATGTTGGTGGTAATTT+GGG | - | chr1.3:56529889-56529908 | MS.gene07612:CDS | 30.0% |
!! | TAACAATGTTGGTGGTAATT+TGG | - | chr1.3:56529888-56529907 | MS.gene07612:CDS | 30.0% |
AATTTGGGTGTTTCAAATGG+AGG | - | chr1.3:56529904-56529923 | MS.gene07612:CDS | 35.0% | |
ATGAAGCTTATAATTCTCCC+TGG | - | chr1.3:56529950-56529969 | MS.gene07612:CDS | 35.0% | |
GGTAATTTGGGTGTTTCAAA+TGG | - | chr1.3:56529901-56529920 | MS.gene07612:CDS | 35.0% | |
TGAAGCTTATAATTCTCCCT+GGG | - | chr1.3:56529951-56529970 | MS.gene07612:CDS | 35.0% | |
! | ATTTATCTTTCTGGAGGACA+AGG | - | chr1.3:56529625-56529644 | MS.gene07612:CDS | 35.0% |
! | GTTATGAATATCGGTGGTTT+TGG | + | chr1.3:56529343-56529362 | None:intergenic | 35.0% |
! | TCTCTTGTTATGAATATCGG+TGG | + | chr1.3:56529349-56529368 | None:intergenic | 35.0% |
!!! | GGTTTGTTTTTTGAACCTGA+TGG | + | chr1.3:56529322-56529341 | None:intergenic | 35.0% |
!!! | TGTTTTTTGAACCTGATGGA+CGG | + | chr1.3:56529318-56529337 | None:intergenic | 35.0% |
ATTTGCATTCTAAGCGCAAG+TGG | - | chr1.3:56529466-56529485 | MS.gene07612:CDS | 40.0% | |
CAGTTAGCAATTGGATCTGT+TGG | - | chr1.3:56529838-56529857 | MS.gene07612:CDS | 40.0% | |
CTGTCGTTAACGTTTCTCTT+CGG | - | chr1.3:56529491-56529510 | MS.gene07612:CDS | 40.0% | |
GAAGCTTATAATTCTCCCTG+GGG | - | chr1.3:56529952-56529971 | MS.gene07612:CDS | 40.0% | |
TTACTCCTGTTACAGCACTT+TGG | + | chr1.3:56529183-56529202 | None:intergenic | 40.0% | |
TTTGCAAGAAAACGACAGAG+AGG | - | chr1.3:56529442-56529461 | MS.gene07612:CDS | 40.0% | |
! | GAGAGTATATCAAATCTCCC+AGG | + | chr1.3:56529550-56529569 | None:intergenic | 40.0% |
! | TGTTACAGCACTTTGGTTCA+TGG | + | chr1.3:56529176-56529195 | None:intergenic | 40.0% |
!! | ATGAACCAAAGTGCTGTAAC+AGG | - | chr1.3:56529175-56529194 | MS.gene07612:CDS | 40.0% |
ATAGTCAAACCAGTAGCTCC+CGG | + | chr1.3:56529607-56529626 | None:intergenic | 45.0% | |
CATGTCATGGAAGTAGCATC+AGG | - | chr1.3:56529391-56529410 | MS.gene07612:CDS | 45.0% | |
CCAACATTGTTATAGCCTGG+TGG | + | chr1.3:56529880-56529899 | None:intergenic | 45.0% | |
CCACCAACATTGTTATAGCC+TGG | + | chr1.3:56529883-56529902 | None:intergenic | 45.0% | |
CCACCAGGCTATAACAATGT+TGG | - | chr1.3:56529877-56529896 | MS.gene07612:CDS | 45.0% | |
CCAGGCTATAACAATGTTGG+TGG | - | chr1.3:56529880-56529899 | MS.gene07612:CDS | 45.0% | |
GAAAACAGCGACGAACACAA+AGG | - | chr1.3:56529250-56529269 | MS.gene07612:CDS | 45.0% | |
GAAGGTTCTTCAATTCCACC+AGG | - | chr1.3:56529862-56529881 | MS.gene07612:CDS | 45.0% | |
GCAATTGGATCTGTTGGAGA+AGG | - | chr1.3:56529844-56529863 | MS.gene07612:CDS | 45.0% | |
TGATCATCACCATCCTCAAC+CGG | + | chr1.3:56529748-56529767 | None:intergenic | 45.0% | |
TTCATGGAGAAACCCAGATC+CGG | + | chr1.3:56529160-56529179 | None:intergenic | 45.0% | |
TTTCGAATGCGACGTATGAG+AGG | - | chr1.3:56529719-56529738 | MS.gene07612:CDS | 45.0% | |
! | AGGATGGTGATGATCAGGAA+GGG | - | chr1.3:56529752-56529771 | MS.gene07612:CDS | 45.0% |
! | CTGATGCTACTTCCATGACA+TGG | + | chr1.3:56529393-56529412 | None:intergenic | 45.0% |
AACAGCGACGAACACAAAGG+AGG | - | chr1.3:56529253-56529272 | MS.gene07612:CDS | 50.0% | |
CCACTAGGAAAACCGGATCT+GGG | - | chr1.3:56529145-56529164 | MS.gene07612:CDS | 50.0% | |
CTCCTCTCCACTAGGAAAAC+CGG | - | chr1.3:56529138-56529157 | MS.gene07612:CDS | 50.0% | |
GGGATGGGACAGTTAGCAAT+TGG | - | chr1.3:56529829-56529848 | MS.gene07612:CDS | 50.0% | |
GTTGCCGCCATCAACATAAC+CGG | + | chr1.3:56529697-56529716 | None:intergenic | 50.0% | |
GTTTCTCTTCGGCAACCTAC+AGG | - | chr1.3:56529502-56529521 | MS.gene07612:CDS | 50.0% | |
TCAGTAACCTCCTCTCCACT+AGG | - | chr1.3:56529130-56529149 | MS.gene07612:CDS | 50.0% | |
TCCACTAGGAAAACCGGATC+TGG | - | chr1.3:56529144-56529163 | MS.gene07612:CDS | 50.0% | |
! | ATCCGGTTTTCCTAGTGGAG+AGG | + | chr1.3:56529143-56529162 | None:intergenic | 50.0% |
! | GAGGATGGTGATGATCAGGA+AGG | - | chr1.3:56529751-56529770 | MS.gene07612:CDS | 50.0% |
! | GGTTGAGGATGGTGATGATC+AGG | - | chr1.3:56529747-56529766 | MS.gene07612:CDS | 50.0% |
! | TTCTGGAGGACAAGGACAAG+TGG | - | chr1.3:56529633-56529652 | MS.gene07612:CDS | 50.0% |
!! | GATGATCAGGAAGGGCATCA+AGG | - | chr1.3:56529760-56529779 | MS.gene07612:CDS | 50.0% |
ACATGGCTTCGTAGCGCGTT+AGG | + | chr1.3:56529376-56529395 | None:intergenic | 55.0% | |
ACCATGACTAGCATGACCCC+AGG | + | chr1.3:56529971-56529990 | None:intergenic | 55.0% | |
AGCGACGAACACAAAGGAGG+TGG | - | chr1.3:56529256-56529275 | MS.gene07612:CDS | 55.0% | |
CATGGCTTCGTAGCGCGTTA+GGG | + | chr1.3:56529375-56529394 | None:intergenic | 55.0% | |
CCATGACTAGCATGACCCCA+GGG | + | chr1.3:56529970-56529989 | None:intergenic | 55.0% | |
GGACAAGGACAAGTGGTTGG+CGG | - | chr1.3:56529640-56529659 | MS.gene07612:CDS | 55.0% | |
GGAGGACAAGGACAAGTGGT+TGG | - | chr1.3:56529637-56529656 | MS.gene07612:CDS | 55.0% | |
TCCATCCCTCCTAGACCAAC+CGG | + | chr1.3:56529106-56529125 | None:intergenic | 55.0% | |
! | AACCTGATGGACGGCCTCTT+GGG | + | chr1.3:56529309-56529328 | None:intergenic | 55.0% |
! | CCCAGATCCGGTTTTCCTAG+TGG | + | chr1.3:56529148-56529167 | None:intergenic | 55.0% |
! | CGGTTTTCCTAGTGGAGAGG+AGG | + | chr1.3:56529140-56529159 | None:intergenic | 55.0% |
! | TGGTGTGGTTGGTCCACTTG+TGG | - | chr1.3:56529663-56529682 | MS.gene07612:CDS | 55.0% |
! | TGTGGTTGGTCCACTTGTGG+CGG | - | chr1.3:56529666-56529685 | MS.gene07612:CDS | 55.0% |
! | TTGACCGGTTCAGTGCTTCC+TGG | - | chr1.3:56529571-56529590 | MS.gene07612:CDS | 55.0% |
!! | AGGTCCAGGAAGCACTGAAC+CGG | + | chr1.3:56529578-56529597 | None:intergenic | 55.0% |
!! | ATGGCAAACAGGTGGTGGAC+CGG | - | chr1.3:56529079-56529098 | MS.gene07612:CDS | 55.0% |
!! | GATCAGGAAGGGCATCAAGG+TGG | - | chr1.3:56529763-56529782 | MS.gene07612:CDS | 55.0% |
ACAAGTGGTTGGCGGTGGTG+TGG | - | chr1.3:56529648-56529667 | MS.gene07612:CDS | 60.0% | |
ACCATAGCTCCGGGACCTGT+AGG | + | chr1.3:56529520-56529539 | None:intergenic | 60.0% | |
ACCTACAGGTCCCGGAGCTA+TGG | - | chr1.3:56529516-56529535 | MS.gene07612:CDS | 60.0% | |
CAAGGACAAGTGGTTGGCGG+TGG | - | chr1.3:56529643-56529662 | MS.gene07612:CDS | 60.0% | |
CCCTGGGGTCATGCTAGTCA+TGG | - | chr1.3:56529967-56529986 | MS.gene07612:CDS | 60.0% | |
CGCCATCAACATAACCGGCC+CGG | + | chr1.3:56529692-56529711 | None:intergenic | 60.0% | |
CGCGCTACGAAGCCATGTCA+TGG | - | chr1.3:56529378-56529397 | MS.gene07612:CDS | 60.0% | |
CTTCGGCAACCTACAGGTCC+CGG | - | chr1.3:56529508-56529527 | MS.gene07612:CDS | 60.0% | |
GTCAAACCAGTAGCTCCCGG+CGG | + | chr1.3:56529604-56529623 | None:intergenic | 60.0% | |
TACAGGTCCCGGAGCTATGG+TGG | - | chr1.3:56529519-56529538 | MS.gene07612:CDS | 60.0% | |
TGCGACGTATGAGAGGCTGC+CGG | - | chr1.3:56529726-56529745 | MS.gene07612:CDS | 60.0% | |
TGCTAACTGTCCCATCCCCG+CGG | + | chr1.3:56529827-56529846 | None:intergenic | 60.0% | |
! | CGGGCCGGTTATGTTGATGG+CGG | - | chr1.3:56529690-56529709 | MS.gene07612:CDS | 60.0% |
! | GAACCTGATGGACGGCCTCT+TGG | + | chr1.3:56529310-56529329 | None:intergenic | 60.0% |
! | GAGCTATGGTGGCGCTTCCT+GGG | - | chr1.3:56529530-56529549 | MS.gene07612:CDS | 60.0% |
! | GTATGAGAGGCTGCCGGTTG+AGG | - | chr1.3:56529732-56529751 | MS.gene07612:CDS | 60.0% |
!! | AAACAGGTGGTGGACCGGAC+CGG | - | chr1.3:56529084-56529103 | MS.gene07612:CDS | 60.0% |
!! | ACCGGTTGGTCTAGGAGGGA+TGG | - | chr1.3:56529102-56529121 | MS.gene07612:CDS | 60.0% |
!! | AGGAAGCGCCACCATAGCTC+CGG | + | chr1.3:56529530-56529549 | None:intergenic | 60.0% |
!! | CAGGAAGGGCATCAAGGTGG+TGG | - | chr1.3:56529766-56529785 | MS.gene07612:CDS | 60.0% |
!! | CATCAAGGTGGTGGTGGTGG+TGG | - | chr1.3:56529775-56529794 | MS.gene07612:CDS | 60.0% |
!! | GAAGGGCATCAAGGTGGTGG+TGG | - | chr1.3:56529769-56529788 | MS.gene07612:CDS | 60.0% |
CCCTCCTAGACCAACCGGTC+CGG | + | chr1.3:56529101-56529120 | None:intergenic | 65.0% | |
CTTCCTGGACCTTCACCGCC+GGG | - | chr1.3:56529586-56529605 | MS.gene07612:CDS | 65.0% | |
GCTTCCTGGACCTTCACCGC+CGG | - | chr1.3:56529585-56529604 | MS.gene07612:CDS | 65.0% | |
GGCCGGGCCGGTTATGTTGA+TGG | - | chr1.3:56529687-56529706 | MS.gene07612:CDS | 65.0% | |
GTGGTTGGCGGTGGTGTGGT+TGG | - | chr1.3:56529652-56529671 | MS.gene07612:CDS | 65.0% | |
GTTGGTCCACTTGTGGCGGC+CGG | - | chr1.3:56529670-56529689 | MS.gene07612:CDS | 65.0% | |
TTGGTCCACTTGTGGCGGCC+GGG | - | chr1.3:56529671-56529690 | MS.gene07612:CDS | 65.0% | |
! | CTGATGGACGGCCTCTTGGG+CGG | + | chr1.3:56529306-56529325 | None:intergenic | 65.0% |
! | GAGAGGCTGCCGGTTGAGGA+TGG | - | chr1.3:56529736-56529755 | MS.gene07612:CDS | 65.0% |
! | GGAGCTATGGTGGCGCTTCC+TGG | - | chr1.3:56529529-56529548 | MS.gene07612:CDS | 65.0% |
!! | ACCGGACCGGTTGGTCTAGG+AGG | - | chr1.3:56529097-56529116 | MS.gene07612:CDS | 65.0% |
!! | CAAGGTGGTGGTGGTGGTGG+TGG | - | chr1.3:56529778-56529797 | MS.gene07612:CDS | 65.0% |
!! | CCGGACCGGTTGGTCTAGGA+GGG | - | chr1.3:56529098-56529117 | MS.gene07612:CDS | 65.0% |
!! | GGAAGCGCCACCATAGCTCC+GGG | + | chr1.3:56529529-56529548 | None:intergenic | 65.0% |
!! | GGGCATCAAGGTGGTGGTGG+TGG | - | chr1.3:56529772-56529791 | MS.gene07612:CDS | 65.0% |
!! | TGGACCGGACCGGTTGGTCT+AGG | - | chr1.3:56529094-56529113 | MS.gene07612:CDS | 65.0% |
CCAGTAGCTCCCGGCGGTGA+AGG | + | chr1.3:56529598-56529617 | None:intergenic | 70.0% | |
CCTTCACCGCCGGGAGCTAC+TGG | - | chr1.3:56529595-56529614 | MS.gene07612:CDS | 70.0% | |
CGCCCAAGAGGCCGTCCATC+AGG | - | chr1.3:56529304-56529323 | MS.gene07612:CDS | 70.0% | |
!! | AGGTGGTGGACCGGACCGGT+TGG | - | chr1.3:56529088-56529107 | MS.gene07612:CDS | 70.0% |
ACCTCCACGCGCCGCCCAAG+AGG | - | chr1.3:56529292-56529311 | MS.gene07612:CDS | 75.0% | |
AGTCTCCGACGCGTGCCGCG+GGG | - | chr1.3:56529809-56529828 | MS.gene07612:CDS | 75.0% | |
CGAGTCTCCGACGCGTGCCG+CGG | - | chr1.3:56529807-56529826 | MS.gene07612:CDS | 75.0% | |
GAGTCTCCGACGCGTGCCGC+GGG | - | chr1.3:56529808-56529827 | MS.gene07612:CDS | 75.0% | |
GCTCCCGGCGGTGAAGGTCC+AGG | + | chr1.3:56529592-56529611 | None:intergenic | 75.0% | |
TCCACTTGTGGCGGCCGGGC+CGG | - | chr1.3:56529675-56529694 | MS.gene07612:CDS | 75.0% | |
! | ACCGGCCCGGCCGCCACAAG+TGG | + | chr1.3:56529679-56529698 | None:intergenic | 80.0% |
! | ACGGCCTCTTGGGCGGCGCG+TGG | + | chr1.3:56529299-56529318 | None:intergenic | 80.0% |
! | CCCATCCCCGCGGCACGCGT+CGG | + | chr1.3:56529817-56529836 | None:intergenic | 80.0% |
! | CCGACGCGTGCCGCGGGGAT+GGG | - | chr1.3:56529814-56529833 | MS.gene07612:CDS | 80.0% |
! | GCCTCTTGGGCGGCGCGTGG+AGG | + | chr1.3:56529296-56529315 | None:intergenic | 80.0% |
! | TCCGACGCGTGCCGCGGGGA+TGG | - | chr1.3:56529813-56529832 | MS.gene07612:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 56529079 | 56530005 | 56529079 | ID=MS.gene07612 |
chr1.3 | mRNA | 56529079 | 56530005 | 56529079 | ID=MS.gene07612.t1;Parent=MS.gene07612 |
chr1.3 | exon | 56529079 | 56530005 | 56529079 | ID=MS.gene07612.t1.exon1;Parent=MS.gene07612.t1 |
chr1.3 | CDS | 56529079 | 56530005 | 56529079 | ID=cds.MS.gene07612.t1;Parent=MS.gene07612.t1 |
Gene Sequence |
Protein sequence |