AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1181380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181380 MtrunA17_Chr8g0339291 96.795 468 12 1 1 468 1 465 0.0 931
Msa1181380 MtrunA17_Chr7g0235071 74.034 466 109 3 1 466 1 454 0.0 704
Msa1181380 MtrunA17_Chr8g0341821 70.716 461 119 7 1 458 1 448 0.0 622
Msa1181380 MtrunA17_Chr7g0238471 79.012 81 16 1 73 153 34 113 6.32e-41 142
Msa1181380 MtrunA17_Chr7g0238481 59.804 102 34 2 186 287 3 97 7.61e-31 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181380 AT3G07270.1 60.814 467 161 10 1 460 1 452 0.0 546
Msa1181380 AT3G07270.2 60.600 467 162 10 1 460 1 452 0.0 542

Find 154 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACCTTCGTAAATTAAAT+AGG 0.191882 8_1:+15756607 None:intergenic
TTTGATACTTTCTGCAAATC+TGG 0.223431 8_1:-15759418 Msa1181380:five_prime_UTR
TTTCAACTGACATTGCTTCT+AGG 0.247277 8_1:-15757088 Msa1181380:CDS
TCCACCTAAAAGTGGTGATA+TGG 0.266701 8_1:+15757211 None:intergenic
ATTGCAAATGCTACATCTTC+TGG 0.267208 8_1:-15757047 Msa1181380:CDS
TGCAATACTTTGCAAGAATA+AGG 0.267255 8_1:+15757064 None:intergenic
AGTATCAAACTTTCCAATAA+AGG 0.274255 8_1:+15759432 None:intergenic
ACATAACGAACATTGGATTA+AGG 0.275924 8_1:+15759539 None:intergenic
TTTCTAGAATCAAGCCTAAA+AGG 0.282324 8_1:-15757839 Msa1181380:CDS
ATGGAAATGGAATGATTTAA+TGG 0.292186 8_1:-15756536 Msa1181380:three_prime_UTR
GTCTTGGTGAAGATATTAAT+AGG 0.315735 8_1:-15759226 Msa1181380:CDS
TGCTTAATCCAACAACTCTT+TGG 0.318636 8_1:+15758020 None:intergenic
TCTAGGGGAATTGAAAAGTT+TGG 0.319552 8_1:-15757146 Msa1181380:CDS
TAAATCTAGAGGCATTGATA+TGG 0.321920 8_1:-15757732 Msa1181380:CDS
TTATTATCTATGCCAGCTTC+AGG 0.326221 8_1:+15758169 None:intergenic
ATACATGTTTCGTCAGGTTC+CGG 0.333764 8_1:-15757806 Msa1181380:CDS
GAAAATGGAGTGAGTTTGTT+TGG 0.336188 8_1:-15759317 Msa1181380:CDS
CGGATTGATAGGTCCCGTTT+TGG 0.343833 8_1:+15757634 None:intergenic
GTCACACATGCATGATTTCT+AGG 0.349323 8_1:-15757163 Msa1181380:CDS
CCGAGTTGAACTTGCCGTTT+TGG 0.352393 8_1:-15757400 Msa1181380:CDS
TCCATAAAAGAAGAAGATTA+TGG 0.355436 8_1:+15759644 None:intergenic
AGAAAGATTGTTTCTATGTC+AGG 0.355506 8_1:+15757857 None:intergenic
ATGGTAATGCAGAGATTAAT+CGG 0.359843 8_1:+15756842 None:intergenic
CTCCTAATCGTTTCGTGAAA+TGG 0.361018 8_1:-15757538 Msa1181380:CDS
TGGTTTCAAGCTCCAAGTTC+AGG 0.361526 8_1:-15757261 Msa1181380:CDS
ACGTGAACAACGCCGTGAAA+TGG 0.371684 8_1:+15757353 None:intergenic
GTGATCATTGCCGGATTGAT+AGG 0.375935 8_1:+15757623 None:intergenic
AGGGTGATTATAATTCTTCT+TGG 0.375973 8_1:-15757024 Msa1181380:exon
TCACATCCCTGTCAATGCTT+TGG 0.377050 8_1:+15757504 None:intergenic
TTGTAAGCCTTTCCTGAACT+TGG 0.378188 8_1:+15757249 None:intergenic
TCAGTTAGGAAGGAGCTTGC+AGG 0.382040 8_1:-15757563 Msa1181380:CDS
GAAGAAGATTATGGCATTTG+TGG 0.382100 8_1:+15759653 None:intergenic
CATGTCGGTTACGTCCCTTC+TGG 0.382316 8_1:-15758043 Msa1181380:CDS
ATCGGTCATGCTGGCGGTGC+AGG 0.382420 8_1:-15758142 Msa1181380:CDS
TACAATGGTGAGCTTGAAAA+TGG 0.382873 8_1:-15759332 Msa1181380:CDS
CCTTCTGGCCAAAGAGTTGT+TGG 0.387250 8_1:-15758028 Msa1181380:CDS
AATCGGGAGGTAAGTAGAAT+TGG 0.392417 8_1:+15756859 None:intergenic
GGCATAGATAATAATAAAAT+CGG 0.400523 8_1:-15758160 Msa1181380:CDS
TACTCAACACTCCGGTTCTC+AGG 0.401105 8_1:+15756809 None:intergenic
CACCAAAGTTTCCTCCAAAA+CGG 0.401213 8_1:-15757648 Msa1181380:CDS
GATTATAATTCTTCTTGGAT+TGG 0.407694 8_1:-15757019 Msa1181380:three_prime_UTR
ACCAAAGTTTCCTCCAAAAC+GGG 0.409382 8_1:-15757647 Msa1181380:CDS
TATAACCATCAATTCAAAAC+TGG 0.409554 8_1:+15756497 None:intergenic
TCAGAAGGATTCAGTCCAAT+TGG 0.411941 8_1:-15757317 Msa1181380:CDS
CCTATTTAATTTACGAAGGT+TGG 0.412363 8_1:-15756607 Msa1181380:three_prime_UTR
ACAGCTACCATTGCTGTGTT+AGG 0.412616 8_1:-15757116 Msa1181380:CDS
GTATGTGATGATCAAATATA+AGG 0.415088 8_1:+15756719 None:intergenic
TTTCCAATAAAGGGTCCAAA+AGG 0.416003 8_1:+15759442 None:intergenic
CATTGGATTAAGGTTGATGT+TGG 0.428216 8_1:+15759549 None:intergenic
ATATTAATAGGGAAGGTCTT+AGG 0.430481 8_1:-15759214 Msa1181380:CDS
TATAGAGAAGAAGACTATAA+AGG 0.432062 8_1:+15756437 None:intergenic
AGCCATTTCACGAAACGATT+AGG 0.432174 8_1:+15757536 None:intergenic
ATGTTTGACTGCCATGGAAA+TGG 0.434237 8_1:-15756549 Msa1181380:three_prime_UTR
CTTTGGGAGAAGATTCAGTT+AGG 0.436286 8_1:-15757577 Msa1181380:CDS
GTATCAAACTTTCCAATAAA+GGG 0.438164 8_1:+15759433 None:intergenic
ACTTCAAGAGCCTCAGCGTC+TGG 0.438758 8_1:-15757963 Msa1181380:CDS
CAACCTTCGTAAATTAAATA+GGG 0.439942 8_1:+15756608 None:intergenic
TTCAAAACTGGTAGAAGCTA+TGG 0.446726 8_1:+15756509 None:intergenic
AAAATGGAGTGAGTTTGTTT+GGG 0.453831 8_1:-15759316 Msa1181380:CDS
AATACTGCGGTGATCATTGC+CGG 0.455043 8_1:+15757614 None:intergenic
AATCAGAATAATAGTAAAAG+AGG 0.456069 8_1:+15759612 None:intergenic
AGTGTGTTCAGCTTTACAAC+AGG 0.460100 8_1:-15757933 Msa1181380:CDS
GGTGCTTTATTTCCTGAAGC+TGG 0.460502 8_1:-15758181 Msa1181380:CDS
CTTTATCAAGATTTACATGA+TGG 0.461730 8_1:-15756666 Msa1181380:three_prime_UTR
AATAATAAAATCGGTCATGC+TGG 0.461804 8_1:-15758151 Msa1181380:CDS
AAGAAGATTATGGCATTTGT+GGG 0.462301 8_1:+15759654 None:intergenic
ACACTCCGGTTCTCAGGAAA+AGG 0.467624 8_1:+15756815 None:intergenic
GATGGACACCAGCATTGGTC+AGG 0.472338 8_1:+15757686 None:intergenic
TTGATACTTTCTGCAAATCT+GGG 0.475166 8_1:-15759417 Msa1181380:five_prime_UTR
TATGGAAAATATTCATGCTC+GGG 0.478199 8_1:-15757714 Msa1181380:CDS
GGGGATTGCCTGACCAATGC+TGG 0.478425 8_1:-15757694 Msa1181380:CDS
CATCATATACTTCCATTTCA+CGG 0.483542 8_1:-15757365 Msa1181380:CDS
TCTTGGTGAAGATATTAATA+GGG 0.485627 8_1:-15759225 Msa1181380:CDS
TGTGGGGAGGATGTTATTGT+CGG 0.487029 8_1:+15759671 None:intergenic
TGAACTTCCAAAGCATTGAC+AGG 0.490128 8_1:-15757511 Msa1181380:CDS
GGGAGAAGATTCAGTTAGGA+AGG 0.492445 8_1:-15757573 Msa1181380:CDS
GTGAAGATACATGTTTCGTC+AGG 0.495703 8_1:-15757812 Msa1181380:CDS
GGAAACTTTGGTGGAAAGAG+TGG 0.500080 8_1:+15757658 None:intergenic
AGTACAACGGCAACCCCTGC+TGG 0.507814 8_1:+15757902 None:intergenic
AACCGACATGACATTTGACT+TGG 0.512030 8_1:+15758056 None:intergenic
GTGGAAAGAGTGGAGAGAGA+TGG 0.512679 8_1:+15757668 None:intergenic
TGTGTAGACTGCTGCATTGG+TGG 0.514118 8_1:+15756939 None:intergenic
ATTAAATCATTCCATTTCCA+TGG 0.514829 8_1:+15756538 None:intergenic
ATTACATTTCCACCTAAAAG+TGG 0.515978 8_1:+15757203 None:intergenic
ATAAAACCTTTGAATGCTGC+TGG 0.516330 8_1:-15757455 Msa1181380:CDS
CAACAGGGAATTCAACCAGC+AGG 0.521643 8_1:-15757917 Msa1181380:CDS
GTAGGATATTTCCTTTCAGA+AGG 0.523652 8_1:-15757332 Msa1181380:CDS
GTTGGAATGTGTGGATCCTA+AGG 0.523858 8_1:+15759567 None:intergenic
TCACACATGCATGATTTCTA+GGG 0.524065 8_1:-15757162 Msa1181380:CDS
ATATGGAAAATATTCATGCT+CGG 0.536544 8_1:-15757715 Msa1181380:CDS
CAGTTAGGAAGGAGCTTGCA+GGG 0.539632 8_1:-15757562 Msa1181380:CDS
AAGGTTGATGTTGGAATGTG+TGG 0.540020 8_1:+15759558 None:intergenic
CAAAACGGGACCTATCAATC+CGG 0.547377 8_1:-15757633 Msa1181380:CDS
ACATGACATTTGACTTGGAA+AGG 0.549188 8_1:+15758061 None:intergenic
TAAGGTGAGAAGACAAAACT+TGG 0.549315 8_1:+15756737 None:intergenic
ATACATTACAGAGAAACCTT+AGG 0.550665 8_1:-15759583 Msa1181380:five_prime_UTR
TCAAGCTCCAAGTTCAGGAA+AGG 0.552246 8_1:-15757256 Msa1181380:CDS
TGCTCACATTGTGACCAAAA+CGG 0.553718 8_1:+15757386 None:intergenic
AAGATTCACAGTAGGAATAG+AGG 0.553746 8_1:+15758092 None:intergenic
AGATTATGGCATTTGTGGGG+AGG 0.554832 8_1:+15759658 None:intergenic
ACCTCGCCAGCAGCATTCAA+AGG 0.556508 8_1:+15757449 None:intergenic
TAGAATCAAGCCTAAAAGGT+GGG 0.558239 8_1:-15757835 Msa1181380:CDS
CAACAACTCTTTGGCCAGAA+GGG 0.562430 8_1:+15758029 None:intergenic
GAGTTTGTTTGGGTGTAGTG+AGG 0.562917 8_1:-15759306 Msa1181380:CDS
AAGGTGAAGGACATTGTTGA+AGG 0.564141 8_1:-15758202 Msa1181380:CDS
TTTGATGAGGTGTGTTACAA+TGG 0.564966 8_1:-15759347 Msa1181380:CDS
TTGCAAATGTTTGACTGCCA+TGG 0.565324 8_1:-15756555 Msa1181380:three_prime_UTR
TGGTAATGCAGAGATTAATC+GGG 0.565525 8_1:+15756843 None:intergenic
AGAGAGATGGACACCAGCAT+TGG 0.567275 8_1:+15757681 None:intergenic
GACAGGGATGTGAAGCTGAA+TGG 0.568364 8_1:-15757494 Msa1181380:CDS
ATTCCCTATTTAATTTACGA+AGG 0.572316 8_1:-15756611 Msa1181380:three_prime_UTR
CTGAATGGCTCCATCTGTGG+CGG 0.572648 8_1:-15757479 Msa1181380:CDS
CCAACAACTCTTTGGCCAGA+AGG 0.572834 8_1:+15758028 None:intergenic
GGTCATGCTGGCGGTGCAGG+CGG 0.574523 8_1:-15758139 Msa1181380:CDS
AACAGGGAATTCAACCAGCA+GGG 0.580437 8_1:-15757916 Msa1181380:CDS
TTCCAATAAAGGGTCCAAAA+GGG 0.580875 8_1:+15759443 None:intergenic
ACCTTTGAATGCTGCTGGCG+AGG 0.582613 8_1:-15757450 Msa1181380:CDS
TGAATGGCTCCATCTGTGGC+GGG 0.585957 8_1:-15757478 Msa1181380:CDS
TTGGACTGAATCCTTCTGAA+AGG 0.588065 8_1:+15757321 None:intergenic
AGGAATAGAGGTCAATGTCT+CGG 0.592016 8_1:+15758104 None:intergenic
GACACCACATCGTGTTGCAA+AGG 0.593098 8_1:-15759189 Msa1181380:CDS
GCAAATGCTACATCTTCTGG+AGG 0.595070 8_1:-15757044 Msa1181380:CDS
AAGCTGAATGGCTCCATCTG+TGG 0.597856 8_1:-15757482 Msa1181380:CDS
GGTGAAGATATTAATAGGGA+AGG 0.598277 8_1:-15759221 Msa1181380:CDS
AAATGTAATAGTAGTTGTAG+AGG 0.609306 8_1:-15757189 Msa1181380:CDS
CCAAAACGGCAAGTTCAACT+CGG 0.611977 8_1:+15757400 None:intergenic
GTGTGTGTAGACTGCTGCAT+TGG 0.614726 8_1:+15756936 None:intergenic
AATAAAATCGGTCATGCTGG+CGG 0.619283 8_1:-15758148 Msa1181380:CDS
CTAGAATCAAGCCTAAAAGG+TGG 0.619288 8_1:-15757836 Msa1181380:CDS
AGAATCAAGCCTAAAAGGTG+GGG 0.626485 8_1:-15757834 Msa1181380:CDS
TAGCAAACAAGATTCACAGT+AGG 0.626754 8_1:+15758084 None:intergenic
TTCCAAGTCAAATGTCATGT+CGG 0.630990 8_1:-15758058 Msa1181380:CDS
GCTCTACGTGAAGGAACTAG+AGG 0.631663 8_1:-15759167 Msa1181380:intron
TGGCAATCTCTCGTATTAGT+CGG 0.635211 8_1:-15756646 Msa1181380:three_prime_UTR
GTTGCAAAGGCTCTACGTGA+AGG 0.635736 8_1:-15759176 Msa1181380:CDS
ACTTCGTCTGCCAGACGCTG+AGG 0.637304 8_1:+15757953 None:intergenic
GTTCTCAGGAAAAGGAGTCA+TGG 0.642466 8_1:+15756823 None:intergenic
GAACTTCCAAAGCATTGACA+GGG 0.642979 8_1:-15757510 Msa1181380:CDS
ATGGAAAATATTCATGCTCG+GGG 0.645748 8_1:-15757713 Msa1181380:CDS
AAAGCATCCTAACACAGCAA+TGG 0.646055 8_1:+15757109 None:intergenic
AGGTTATAGACAAAAGGTGA+AGG 0.646876 8_1:-15758215 Msa1181380:CDS
GTGTGTTCAGCTTTACAACA+GGG 0.658653 8_1:-15757932 Msa1181380:CDS
GTGTAGTGAGGTTGAAGATG+AGG 0.662975 8_1:-15759294 Msa1181380:CDS
AGAAGATTATGGCATTTGTG+GGG 0.662995 8_1:+15759655 None:intergenic
AGAGCCTTTGCAACACGATG+TGG 0.663017 8_1:+15759185 None:intergenic
CACACATGCATGATTTCTAG+GGG 0.664632 8_1:-15757161 Msa1181380:CDS
TGAGATAGAGCATATCTATG+TGG 0.665062 8_1:-15759694 Msa1181380:five_prime_UTR
TAATGCAGAGATTAATCGGG+AGG 0.666713 8_1:+15756846 None:intergenic
TTTGAATGCTGCTGGCGAGG+TGG 0.672064 8_1:-15757447 Msa1181380:CDS
ACAGGGAATTCAACCAGCAG+GGG 0.676707 8_1:-15757915 Msa1181380:CDS
CAAATGCTACATCTTCTGGA+GGG 0.677186 8_1:-15757043 Msa1181380:CDS
ATGTGTACACTGAAGTACAA+CGG 0.692084 8_1:+15757889 None:intergenic
TTTCACGGCGTTGTTCACGT+AGG 0.695497 8_1:-15757350 Msa1181380:CDS
CTGCTATTGAAGATGCTGTG+AGG 0.720934 8_1:-15759262 Msa1181380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTTATTTGTTTAAAAATT+TGG - chr8_1:15757216-15757235 Msa1181380:CDS 10.0%
!!! TTGATGTTTTTTTTTTTTAA+TGG - chr8_1:15757287-15757306 Msa1181380:CDS 10.0%
!!! TGATGTTTTTTTTTTTTAAT+GGG - chr8_1:15757288-15757307 Msa1181380:CDS 10.0%
!!! TAATTTTGACATCAAAAAAA+GGG + chr8_1:15756483-15756502 None:intergenic 15.0%
!!! ATAATTTTGACATCAAAAAA+AGG + chr8_1:15756484-15756503 None:intergenic 15.0%
!!! TCTTAATTTTTGCTATTTTT+TGG - chr8_1:15756846-15756865 Msa1181380:three_prime_UTR 15.0%
!!! CTTAATTTTTGCTATTTTTT+GGG - chr8_1:15756847-15756866 Msa1181380:three_prime_UTR 15.0%
!!! ATTAATCTTTTAACCATTTT+AGG - chr8_1:15757544-15757563 Msa1181380:CDS 15.0%
!!! TTAATCTTTTAACCATTTTA+GGG - chr8_1:15757545-15757564 Msa1181380:CDS 15.0%
!!! TTTTATCTTATTAAATCTAG+AGG - chr8_1:15758493-15758512 Msa1181380:intron 15.0%
!!! ATTTTCAATTCTAAAATCTT+TGG - chr8_1:15758642-15758661 Msa1181380:intron 15.0%
!!! TTTTCAATTCTAAAATCTTT+GGG - chr8_1:15758643-15758662 Msa1181380:intron 15.0%
!! ATGTGTAAAAAGATTAATTC+AGG + chr8_1:15756454-15756473 None:intergenic 20.0%
!!! TTTTTGATGTCAAAATTATG+AGG - chr8_1:15756485-15756504 Msa1181380:three_prime_UTR 20.0%
!!! ATTTTAGTGTTGGAAAATTA+GGG - chr8_1:15756510-15756529 Msa1181380:three_prime_UTR 20.0%
!! AATCAGAATAATAGTAAAAG+AGG + chr8_1:15756627-15756646 None:intergenic 20.0%
!! TAAAAAAACATAACGAACAT+TGG + chr8_1:15756707-15756726 None:intergenic 20.0%
!! AGTATATGATTAGAACATTA+TGG - chr8_1:15757362-15757381 Msa1181380:CDS 20.0%
!! GGAAGAGAATAATAATTATT+GGG + chr8_1:15757914-15757933 None:intergenic 20.0%
!! TGGAAGAGAATAATAATTAT+TGG + chr8_1:15757915-15757934 None:intergenic 20.0%
!! GGCATAGATAATAATAAAAT+CGG - chr8_1:15758076-15758095 Msa1181380:CDS 20.0%
!!! TTTTAGAATTGAAAATACTG+CGG + chr8_1:15758638-15758657 None:intergenic 20.0%
!!! TAAATAGGGAATTTTTTTTG+AGG + chr8_1:15759617-15759636 None:intergenic 20.0%
!!! CATTTTAGTGTTGGAAAATT+AGG - chr8_1:15756509-15756528 Msa1181380:three_prime_UTR 25.0%
! TCCATAAAAGAAGAAGATTA+TGG + chr8_1:15756595-15756614 None:intergenic 25.0%
!!! AATTTTTTCTATCACCCTTT+TGG - chr8_1:15756779-15756798 Msa1181380:three_prime_UTR 25.0%
! GTATCAAACTTTCCAATAAA+GGG + chr8_1:15756806-15756825 None:intergenic 25.0%
! AGTATCAAACTTTCCAATAA+AGG + chr8_1:15756807-15756826 None:intergenic 25.0%
! TCTTGGTGAAGATATTAATA+GGG - chr8_1:15757011-15757030 Msa1181380:three_prime_UTR 25.0%
!! GAACACTAATGATTTTTGTT+TGG - chr8_1:15757094-15757113 Msa1181380:CDS 25.0%
!! TAAGATTTCTTTCAAGTAGT+TGG - chr8_1:15757241-15757260 Msa1181380:CDS 25.0%
! TTATCTAGAGATTAATGAGT+TGG - chr8_1:15757329-15757348 Msa1181380:CDS 25.0%
! GTATGGTTCAATATCTAAAT+TGG - chr8_1:15757477-15757496 Msa1181380:CDS 25.0%
! GTTCAATATCTAAATTGGAT+AGG - chr8_1:15757482-15757501 Msa1181380:CDS 25.0%
! ATATTCAAACTTCCCTAAAA+TGG + chr8_1:15757560-15757579 None:intergenic 25.0%
! GAAAAATTTGATTGTAGTCA+AGG - chr8_1:15757593-15757612 Msa1181380:CDS 25.0%
! TATTTAAGTGAGAGATAAAG+AGG - chr8_1:15757824-15757843 Msa1181380:CDS 25.0%
! AAAACAAGAGAGCAAATTAT+TGG + chr8_1:15757935-15757954 None:intergenic 25.0%
! ATATGGAAAATATTCATGCT+CGG - chr8_1:15758521-15758540 Msa1181380:intron 25.0%
!! TGTAAAAGTGATTTTCCAAT+TGG + chr8_1:15758937-15758956 None:intergenic 25.0%
! AAATGTAATAGTAGTTGTAG+AGG - chr8_1:15759047-15759066 Msa1181380:intron 25.0%
! GATTATAATTCTTCTTGGAT+TGG - chr8_1:15759217-15759236 Msa1181380:CDS 25.0%
!!! TTTTTTTTTACTCAACACTC+CGG + chr8_1:15759438-15759457 None:intergenic 25.0%
! GTATGTGATGATCAAATATA+AGG + chr8_1:15759520-15759539 None:intergenic 25.0%
! CTTTATCAAGATTTACATGA+TGG - chr8_1:15759570-15759589 Msa1181380:five_prime_UTR 25.0%
!! ATTCCCTATTTAATTTACGA+AGG - chr8_1:15759625-15759644 Msa1181380:five_prime_UTR 25.0%
! CAACCTTCGTAAATTAAATA+GGG + chr8_1:15759631-15759650 None:intergenic 25.0%
! ATTAAATCATTCCATTTCCA+TGG + chr8_1:15759701-15759720 None:intergenic 25.0%
! ATGGAAATGGAATGATTTAA+TGG - chr8_1:15759700-15759719 Msa1181380:five_prime_UTR 25.0%
! TATAACCATCAATTCAAAAC+TGG + chr8_1:15759742-15759761 None:intergenic 25.0%
!! TTATGAGGACATTTTAGTGT+TGG - chr8_1:15756500-15756519 Msa1181380:three_prime_UTR 30.0%
AAGAAGATTATGGCATTTGT+GGG + chr8_1:15756585-15756604 None:intergenic 30.0%
! GCCATAATCTTCTTCTTTTA+TGG - chr8_1:15756591-15756610 Msa1181380:three_prime_UTR 30.0%
! TCTTCTTCTTTTATGGATTC+TGG - chr8_1:15756598-15756617 Msa1181380:three_prime_UTR 30.0%
! CTTCTTCTTTTATGGATTCT+GGG - chr8_1:15756599-15756618 Msa1181380:three_prime_UTR 30.0%
! TTCTTCTTTTATGGATTCTG+GGG - chr8_1:15756600-15756619 Msa1181380:three_prime_UTR 30.0%
ATACATTACAGAGAAACCTT+AGG - chr8_1:15756653-15756672 Msa1181380:three_prime_UTR 30.0%
ACATAACGAACATTGGATTA+AGG + chr8_1:15756700-15756719 None:intergenic 30.0%
TTTGATACTTTCTGCAAATC+TGG - chr8_1:15756818-15756837 Msa1181380:three_prime_UTR 30.0%
TTGATACTTTCTGCAAATCT+GGG - chr8_1:15756819-15756838 Msa1181380:three_prime_UTR 30.0%
!!! TTTTTTGGGTGTGATTTCAA+TGG - chr8_1:15756861-15756880 Msa1181380:three_prime_UTR 30.0%
!!! TTTTTGGGTGTGATTTCAAT+GGG - chr8_1:15756862-15756881 Msa1181380:three_prime_UTR 30.0%
! AAAATGGAGTGAGTTTGTTT+GGG - chr8_1:15756920-15756939 Msa1181380:three_prime_UTR 30.0%
GTCTTGGTGAAGATATTAAT+AGG - chr8_1:15757010-15757029 Msa1181380:three_prime_UTR 30.0%
ATATTAATAGGGAAGGTCTT+AGG - chr8_1:15757022-15757041 Msa1181380:exon 30.0%
!! ATAGTTTTTCAACTTTCCTG+CGG - chr8_1:15757443-15757462 Msa1181380:CDS 30.0%
AGGAAATTCGTGTGATTTAT+TGG - chr8_1:15757613-15757632 Msa1181380:CDS 30.0%
TACGAAAATATTCGATCAAC+AGG - chr8_1:15757704-15757723 Msa1181380:CDS 30.0%
ACGAAAATATTCGATCAACA+GGG - chr8_1:15757705-15757724 Msa1181380:CDS 30.0%
CAGAAACAAGAGAAAGAAAT+CGG + chr8_1:15757863-15757882 None:intergenic 30.0%
AATTATTGGGCTGATATGTT+AGG + chr8_1:15757901-15757920 None:intergenic 30.0%
! TTTTGTCTATAACCTGGAAA+AGG + chr8_1:15758016-15758035 None:intergenic 30.0%
! TTTTCCAGGTTATAGACAAA+AGG - chr8_1:15758015-15758034 Msa1181380:CDS 30.0%
AATAATAAAATCGGTCATGC+TGG - chr8_1:15758085-15758104 Msa1181380:CDS 30.0%
!! AGAAAGATTGTTTCTATGTC+AGG + chr8_1:15758382-15758401 None:intergenic 30.0%
!! TTTCTAGAATCAAGCCTAAA+AGG - chr8_1:15758397-15758416 Msa1181380:intron 30.0%
AAAACAAAAACGCAGACATA+TGG - chr8_1:15758461-15758480 Msa1181380:intron 30.0%
AAACAAAAACGCAGACATAT+GGG - chr8_1:15758462-15758481 Msa1181380:intron 30.0%
!! TAAATCTAGAGGCATTGATA+TGG - chr8_1:15758504-15758523 Msa1181380:intron 30.0%
TATGGAAAATATTCATGCTC+GGG - chr8_1:15758522-15758541 Msa1181380:intron 30.0%
CATCATATACTTCCATTTCA+CGG - chr8_1:15758871-15758890 Msa1181380:intron 30.0%
! CAGTCAATAGTGCATTTTTA+TGG - chr8_1:15758955-15758974 Msa1181380:intron 30.0%
ATTACATTTCCACCTAAAAG+TGG + chr8_1:15759036-15759055 None:intergenic 30.0%
TGCAATACTTTGCAAGAATA+AGG + chr8_1:15759175-15759194 None:intergenic 30.0%
AGGGTGATTATAATTCTTCT+TGG - chr8_1:15759212-15759231 Msa1181380:CDS 30.0%
! TCATTCTCTGCAATTTTTGA+AGG - chr8_1:15759266-15759285 Msa1181380:CDS 30.0%
! ATGGTAATGCAGAGATTAAT+CGG + chr8_1:15759397-15759416 None:intergenic 30.0%
!! AATCCACCAAGTTTTTGTTT+TGG - chr8_1:15759459-15759478 Msa1181380:five_prime_UTR 30.0%
!!! AAGTTTTTGTTTTGGTGACA+CGG - chr8_1:15759467-15759486 Msa1181380:five_prime_UTR 30.0%
CCAACCTTCGTAAATTAAAT+AGG + chr8_1:15759632-15759651 None:intergenic 30.0%
! CCTATTTAATTTACGAAGGT+TGG - chr8_1:15759629-15759648 Msa1181380:five_prime_UTR 30.0%
!!! TTCTACCAGTTTTGAATTGA+TGG - chr8_1:15759734-15759753 Msa1181380:five_prime_UTR 30.0%
TGAGATAGAGCATATCTATG+TGG - chr8_1:15756542-15756561 Msa1181380:three_prime_UTR 35.0%
AGAAGATTATGGCATTTGTG+GGG + chr8_1:15756584-15756603 None:intergenic 35.0%
GAAGAAGATTATGGCATTTG+TGG + chr8_1:15756586-15756605 None:intergenic 35.0%
!! CATTGGATTAAGGTTGATGT+TGG + chr8_1:15756690-15756709 None:intergenic 35.0%
TTCCAATAAAGGGTCCAAAA+GGG + chr8_1:15756796-15756815 None:intergenic 35.0%
TTTCCAATAAAGGGTCCAAA+AGG + chr8_1:15756797-15756816 None:intergenic 35.0%
!! TTTTGGGTGTGATTTCAATG+GGG - chr8_1:15756863-15756882 Msa1181380:three_prime_UTR 35.0%
TTTGATGAGGTGTGTTACAA+TGG - chr8_1:15756889-15756908 Msa1181380:three_prime_UTR 35.0%
TACAATGGTGAGCTTGAAAA+TGG - chr8_1:15756904-15756923 Msa1181380:three_prime_UTR 35.0%
! GAAAATGGAGTGAGTTTGTT+TGG - chr8_1:15756919-15756938 Msa1181380:three_prime_UTR 35.0%
GGTGAAGATATTAATAGGGA+AGG - chr8_1:15757015-15757034 Msa1181380:three_prime_UTR 35.0%
TAGGAAGTTGTTCATGTTAG+TGG - chr8_1:15757501-15757520 Msa1181380:CDS 35.0%
AGGAAGTTGTTCATGTTAGT+GGG - chr8_1:15757502-15757521 Msa1181380:CDS 35.0%
CATGTTAGTGGGATGTATAT+AGG - chr8_1:15757513-15757532 Msa1181380:CDS 35.0%
CATAGTATGTGATTAGTGCA+TGG - chr8_1:15757641-15757660 Msa1181380:CDS 35.0%
AAGTGAGAGATAAAGAGGAA+TGG - chr8_1:15757829-15757848 Msa1181380:CDS 35.0%
! TTCACCTTTTGTCTATAACC+TGG + chr8_1:15758022-15758041 None:intergenic 35.0%
AGGTTATAGACAAAAGGTGA+AGG - chr8_1:15758021-15758040 Msa1181380:CDS 35.0%
TTATTATCTATGCCAGCTTC+AGG + chr8_1:15758070-15758089 None:intergenic 35.0%
AAGATTCACAGTAGGAATAG+AGG + chr8_1:15758147-15758166 None:intergenic 35.0%
TAGCAAACAAGATTCACAGT+AGG + chr8_1:15758155-15758174 None:intergenic 35.0%
!! ACATGACATTTGACTTGGAA+AGG + chr8_1:15758178-15758197 None:intergenic 35.0%
TTCCAAGTCAAATGTCATGT+CGG - chr8_1:15758178-15758197 Msa1181380:CDS 35.0%
TGCTTAATCCAACAACTCTT+TGG + chr8_1:15758219-15758238 None:intergenic 35.0%
ATGTGTACACTGAAGTACAA+CGG + chr8_1:15758350-15758369 None:intergenic 35.0%
TAGAATCAAGCCTAAAAGGT+GGG - chr8_1:15758401-15758420 Msa1181380:intron 35.0%
!!! GTTTTTGTTTTCAAAGACGC+CGG + chr8_1:15758452-15758471 None:intergenic 35.0%
ATGGAAAATATTCATGCTCG+GGG - chr8_1:15758523-15758542 Msa1181380:intron 35.0%
ATAAAACCTTTGAATGCTGC+TGG - chr8_1:15758781-15758800 Msa1181380:intron 35.0%
GTAGGATATTTCCTTTCAGA+AGG - chr8_1:15758904-15758923 Msa1181380:intron 35.0%
!! GAAACCATATCACCACTTTT+AGG - chr8_1:15759021-15759040 Msa1181380:intron 35.0%
TCACACATGCATGATTTCTA+GGG - chr8_1:15759074-15759093 Msa1181380:intron 35.0%
TCTAGGGGAATTGAAAAGTT+TGG - chr8_1:15759090-15759109 Msa1181380:intron 35.0%
TTTCAACTGACATTGCTTCT+AGG - chr8_1:15759148-15759167 Msa1181380:intron 35.0%
ATTGCAAATGCTACATCTTC+TGG - chr8_1:15759189-15759208 Msa1181380:CDS 35.0%
! TGGTAATGCAGAGATTAATC+GGG + chr8_1:15759396-15759415 None:intergenic 35.0%
TCACCAAAACAAAAACTTGG+TGG + chr8_1:15759465-15759484 None:intergenic 35.0%
GTGTCACCAAAACAAAAACT+TGG + chr8_1:15759468-15759487 None:intergenic 35.0%
!!! AGTTTTTGTTTTGGTGACAC+GGG - chr8_1:15759468-15759487 Msa1181380:five_prime_UTR 35.0%
TAAGGTGAGAAGACAAAACT+TGG + chr8_1:15759502-15759521 None:intergenic 35.0%
TAAACCACCTCAGAAAAAGT+CGG - chr8_1:15759542-15759561 Msa1181380:five_prime_UTR 35.0%
TTCAAAACTGGTAGAAGCTA+TGG + chr8_1:15759730-15759749 None:intergenic 35.0%
!! AAGGTTGATGTTGGAATGTG+TGG + chr8_1:15756681-15756700 None:intergenic 40.0%
!!! TTCAATGGGGTGTTTTGATG+AGG - chr8_1:15756876-15756895 Msa1181380:three_prime_UTR 40.0%
! TGCTGTGAGGATTCTTTTGT+TGG - chr8_1:15756987-15757006 Msa1181380:three_prime_UTR 40.0%
! GCTGTGAGGATTCTTTTGTT+GGG - chr8_1:15756988-15757007 Msa1181380:three_prime_UTR 40.0%
! AGGATTCTTTTGTTGGGTCT+TGG - chr8_1:15756994-15757013 Msa1181380:three_prime_UTR 40.0%
CATACACAATTCTATTCCGC+AGG + chr8_1:15757462-15757481 None:intergenic 40.0%
CTGCGGAATAGAATTGTGTA+TGG - chr8_1:15757460-15757479 Msa1181380:CDS 40.0%
! TGAAGCAATGAACCTTTTCC+AGG - chr8_1:15758001-15758020 Msa1181380:CDS 40.0%
AAGGTGAAGGACATTGTTGA+AGG - chr8_1:15758034-15758053 Msa1181380:CDS 40.0%
AATAAAATCGGTCATGCTGG+CGG - chr8_1:15758088-15758107 Msa1181380:CDS 40.0%
AGGAATAGAGGTCAATGTCT+CGG + chr8_1:15758135-15758154 None:intergenic 40.0%
AACCGACATGACATTTGACT+TGG + chr8_1:15758183-15758202 None:intergenic 40.0%
AGTGTGTTCAGCTTTACAAC+AGG - chr8_1:15758303-15758322 Msa1181380:intron 40.0%
GTGTGTTCAGCTTTACAACA+GGG - chr8_1:15758304-15758323 Msa1181380:intron 40.0%
CTAGAATCAAGCCTAAAAGG+TGG - chr8_1:15758400-15758419 Msa1181380:intron 40.0%
AGAATCAAGCCTAAAAGGTG+GGG - chr8_1:15758402-15758421 Msa1181380:intron 40.0%
GTGAAGATACATGTTTCGTC+AGG - chr8_1:15758424-15758443 Msa1181380:intron 40.0%
ATACATGTTTCGTCAGGTTC+CGG - chr8_1:15758430-15758449 Msa1181380:intron 40.0%
CACCAAAGTTTCCTCCAAAA+CGG - chr8_1:15758588-15758607 Msa1181380:intron 40.0%
ACCAAAGTTTCCTCCAAAAC+GGG - chr8_1:15758589-15758608 Msa1181380:intron 40.0%
! CTTTGGGAGAAGATTCAGTT+AGG - chr8_1:15758659-15758678 Msa1181380:intron 40.0%
CTCCTAATCGTTTCGTGAAA+TGG - chr8_1:15758698-15758717 Msa1181380:intron 40.0%
AGCCATTTCACGAAACGATT+AGG + chr8_1:15758703-15758722 None:intergenic 40.0%
!! TGAACTTCCAAAGCATTGAC+AGG - chr8_1:15758725-15758744 Msa1181380:intron 40.0%
!! GAACTTCCAAAGCATTGACA+GGG - chr8_1:15758726-15758745 Msa1181380:intron 40.0%
TGCTCACATTGTGACCAAAA+CGG + chr8_1:15758853-15758872 None:intergenic 40.0%
TTGGACTGAATCCTTCTGAA+AGG + chr8_1:15758918-15758937 None:intergenic 40.0%
TCAGAAGGATTCAGTCCAAT+TGG - chr8_1:15758919-15758938 Msa1181380:intron 40.0%
TTGTAAGCCTTTCCTGAACT+TGG + chr8_1:15758990-15759009 None:intergenic 40.0%
!! ACCATATCACCACTTTTAGG+TGG - chr8_1:15759024-15759043 Msa1181380:intron 40.0%
TCCACCTAAAAGTGGTGATA+TGG + chr8_1:15759028-15759047 None:intergenic 40.0%
GTCACACATGCATGATTTCT+AGG - chr8_1:15759073-15759092 Msa1181380:intron 40.0%
! CACACATGCATGATTTCTAG+GGG - chr8_1:15759075-15759094 Msa1181380:intron 40.0%
! AAAGCATCCTAACACAGCAA+TGG + chr8_1:15759130-15759149 None:intergenic 40.0%
CAAATGCTACATCTTCTGGA+GGG - chr8_1:15759193-15759212 Msa1181380:CDS 40.0%
AATCGGGAGGTAAGTAGAAT+TGG + chr8_1:15759380-15759399 None:intergenic 40.0%
TAATGCAGAGATTAATCGGG+AGG + chr8_1:15759393-15759412 None:intergenic 40.0%
AAACCACCTCAGAAAAAGTC+GGG - chr8_1:15759543-15759562 Msa1181380:five_prime_UTR 40.0%
TGGCAATCTCTCGTATTAGT+CGG - chr8_1:15759590-15759609 Msa1181380:five_prime_UTR 40.0%
TTGCAAATGTTTGACTGCCA+TGG - chr8_1:15759681-15759700 Msa1181380:five_prime_UTR 40.0%
ATGTTTGACTGCCATGGAAA+TGG - chr8_1:15759687-15759706 Msa1181380:five_prime_UTR 40.0%
TGTGGGGAGGATGTTATTGT+CGG + chr8_1:15756568-15756587 None:intergenic 45.0%
AGATTATGGCATTTGTGGGG+AGG + chr8_1:15756581-15756600 None:intergenic 45.0%
GTTGGAATGTGTGGATCCTA+AGG + chr8_1:15756672-15756691 None:intergenic 45.0%
! CACCCTTTTGGACCCTTTAT+TGG - chr8_1:15756791-15756810 Msa1181380:three_prime_UTR 45.0%
! GAGTTTGTTTGGGTGTAGTG+AGG - chr8_1:15756930-15756949 Msa1181380:three_prime_UTR 45.0%
GTGTAGTGAGGTTGAAGATG+AGG - chr8_1:15756942-15756961 Msa1181380:three_prime_UTR 45.0%
CTGCTATTGAAGATGCTGTG+AGG - chr8_1:15756974-15756993 Msa1181380:three_prime_UTR 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr8_1:15757411-15757430 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr8_1:15757412-15757431 None:intergenic 45.0%
TTGTACCCTGTGTTGAGCAT+TGG - chr8_1:15757769-15757788 Msa1181380:CDS 45.0%
AAGAGCCAATGCTCAACACA+GGG + chr8_1:15757777-15757796 None:intergenic 45.0%
TAAGAGCCAATGCTCAACAC+AGG + chr8_1:15757778-15757797 None:intergenic 45.0%
!! GGTGCTTTATTTCCTGAAGC+TGG - chr8_1:15758055-15758074 Msa1181380:CDS 45.0%
CAACAACTCTTTGGCCAGAA+GGG + chr8_1:15758210-15758229 None:intergenic 45.0%
AACAGGGAATTCAACCAGCA+GGG - chr8_1:15758320-15758339 Msa1181380:intron 45.0%
! GTATCTTCACCCCACCTTTT+AGG + chr8_1:15758414-15758433 None:intergenic 45.0%
GGAAACTTTGGTGGAAAGAG+TGG + chr8_1:15758581-15758600 None:intergenic 45.0%
!!! CGTTTTGGAGGAAACTTTGG+TGG + chr8_1:15758590-15758609 None:intergenic 45.0%
!!! TCCCGTTTTGGAGGAAACTT+TGG + chr8_1:15758593-15758612 None:intergenic 45.0%
! ATTGATAGGTCCCGTTTTGG+AGG + chr8_1:15758602-15758621 None:intergenic 45.0%
CAAAACGGGACCTATCAATC+CGG - chr8_1:15758603-15758622 Msa1181380:intron 45.0%
GTGATCATTGCCGGATTGAT+AGG + chr8_1:15758616-15758635 None:intergenic 45.0%
AATACTGCGGTGATCATTGC+CGG + chr8_1:15758625-15758644 None:intergenic 45.0%
GGGAGAAGATTCAGTTAGGA+AGG - chr8_1:15758663-15758682 Msa1181380:intron 45.0%
TCACATCCCTGTCAATGCTT+TGG + chr8_1:15758735-15758754 None:intergenic 45.0%
CCAAAACGGCAAGTTCAACT+CGG + chr8_1:15758839-15758858 None:intergenic 45.0%
TGGTTTCAAGCTCCAAGTTC+AGG - chr8_1:15758975-15758994 Msa1181380:intron 45.0%
TCAAGCTCCAAGTTCAGGAA+AGG - chr8_1:15758980-15758999 Msa1181380:intron 45.0%
ACAGCTACCATTGCTGTGTT+AGG - chr8_1:15759120-15759139 Msa1181380:intron 45.0%
GCAAATGCTACATCTTCTGG+AGG - chr8_1:15759192-15759211 Msa1181380:CDS 45.0%
GTTCTCAGGAAAAGGAGTCA+TGG + chr8_1:15759416-15759435 None:intergenic 45.0%
! TGACTCCTTTTCCTGAGAAC+CGG - chr8_1:15759416-15759435 Msa1181380:five_prime_UTR 45.0%
AACCACCTCAGAAAAAGTCG+GGG - chr8_1:15759544-15759563 Msa1181380:five_prime_UTR 45.0%
GACACCACATCGTGTTGCAA+AGG - chr8_1:15757047-15757066 Msa1181380:CDS 50.0%
AGAGCCTTTGCAACACGATG+TGG + chr8_1:15757054-15757073 None:intergenic 50.0%
GTTGCAAAGGCTCTACGTGA+AGG - chr8_1:15757060-15757079 Msa1181380:CDS 50.0%
GCTCTACGTGAAGGAACTAG+AGG - chr8_1:15757069-15757088 Msa1181380:CDS 50.0%
ACTAAGTGGGGTCAGCTACA+TGG + chr8_1:15757399-15757418 None:intergenic 50.0%
ATGTAGCTGACCCCACTTAG+TGG - chr8_1:15757398-15757417 Msa1181380:CDS 50.0%
TGTAGCTGACCCCACTTAGT+GGG - chr8_1:15757399-15757418 Msa1181380:CDS 50.0%
TGACCCCACTTAGTGGGATA+AGG - chr8_1:15757405-15757424 Msa1181380:CDS 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr8_1:15757413-15757432 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr8_1:15757410-15757429 Msa1181380:CDS 50.0%
GTGCATGGAGAGATGTTCTG+AGG - chr8_1:15757656-15757675 Msa1181380:CDS 50.0%
CCAACAACTCTTTGGCCAGA+AGG + chr8_1:15758211-15758230 None:intergenic 50.0%
CCTTCTGGCCAAAGAGTTGT+TGG - chr8_1:15758208-15758227 Msa1181380:CDS 50.0%
CAACAGGGAATTCAACCAGC+AGG - chr8_1:15758319-15758338 Msa1181380:intron 50.0%
ACAGGGAATTCAACCAGCAG+GGG - chr8_1:15758321-15758340 Msa1181380:intron 50.0%
AGAGAGATGGACACCAGCAT+TGG + chr8_1:15758558-15758577 None:intergenic 50.0%
GTGGAAAGAGTGGAGAGAGA+TGG + chr8_1:15758571-15758590 None:intergenic 50.0%
! CGGATTGATAGGTCCCGTTT+TGG + chr8_1:15758605-15758624 None:intergenic 50.0%
TCAGTTAGGAAGGAGCTTGC+AGG - chr8_1:15758673-15758692 Msa1181380:intron 50.0%
CAGTTAGGAAGGAGCTTGCA+GGG - chr8_1:15758674-15758693 Msa1181380:intron 50.0%
GACAGGGATGTGAAGCTGAA+TGG - chr8_1:15758742-15758761 Msa1181380:intron 50.0%
AAGCTGAATGGCTCCATCTG+TGG - chr8_1:15758754-15758773 Msa1181380:intron 50.0%
!! AGGTTTTATCCCGCCACAGA+TGG + chr8_1:15758770-15758789 None:intergenic 50.0%
!! CCGAGTTGAACTTGCCGTTT+TGG - chr8_1:15758836-15758855 Msa1181380:intron 50.0%
ACGTGAACAACGCCGTGAAA+TGG + chr8_1:15758886-15758905 None:intergenic 50.0%
TTTCACGGCGTTGTTCACGT+AGG - chr8_1:15758886-15758905 Msa1181380:intron 50.0%
TGTGTAGACTGCTGCATTGG+TGG + chr8_1:15759300-15759319 None:intergenic 50.0%
GTGTGTGTAGACTGCTGCAT+TGG + chr8_1:15759303-15759322 None:intergenic 50.0%
ACACTCCGGTTCTCAGGAAA+AGG + chr8_1:15759424-15759443 None:intergenic 50.0%
TACTCAACACTCCGGTTCTC+AGG + chr8_1:15759430-15759449 None:intergenic 50.0%
!! AGTGACCCCGACTTTTTCTG+AGG + chr8_1:15759552-15759571 None:intergenic 50.0%
! CATGTCGGTTACGTCCCTTC+TGG - chr8_1:15758193-15758212 Msa1181380:CDS 55.0%
ACTTCAAGAGCCTCAGCGTC+TGG - chr8_1:15758273-15758292 Msa1181380:intron 55.0%
!! GATGGACACCAGCATTGGTC+AGG + chr8_1:15758553-15758572 None:intergenic 55.0%
CTGAATGGCTCCATCTGTGG+CGG - chr8_1:15758757-15758776 Msa1181380:intron 55.0%
TGAATGGCTCCATCTGTGGC+GGG - chr8_1:15758758-15758777 Msa1181380:intron 55.0%
ACCTTTGAATGCTGCTGGCG+AGG - chr8_1:15758786-15758805 Msa1181380:intron 55.0%
ACCTCGCCAGCAGCATTCAA+AGG + chr8_1:15758790-15758809 None:intergenic 55.0%
TTTGAATGCTGCTGGCGAGG+TGG - chr8_1:15758789-15758808 Msa1181380:intron 55.0%
!! GACCCCGACTTTTTCTGAGG+TGG + chr8_1:15759549-15759568 None:intergenic 55.0%
ACTTCGTCTGCCAGACGCTG+AGG + chr8_1:15758286-15758305 None:intergenic 60.0%
AGTACAACGGCAACCCCTGC+TGG + chr8_1:15758337-15758356 None:intergenic 60.0%
GGGGATTGCCTGACCAATGC+TGG - chr8_1:15758542-15758561 Msa1181380:intron 60.0%
ATCGGTCATGCTGGCGGTGC+AGG - chr8_1:15758094-15758113 Msa1181380:CDS 65.0%
GGTCATGCTGGCGGTGCAGG+CGG - chr8_1:15758097-15758116 Msa1181380:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 15756451 15759807 15756451 ID=Msa1181380;Name=Msa1181380
chr8_1 mRNA 15756451 15759807 15756451 ID=Msa1181380-mRNA-1;Parent=Msa1181380;Name=Msa1181380-mRNA-1;_AED=0.00;_eAED=0.00;_QI=429|1|1|1|1|1|2|589|468
chr8_1 exon 15756451 15758235 15756451 ID=Msa1181380-mRNA-1:exon:5936;Parent=Msa1181380-mRNA-1
chr8_1 exon 15759168 15759807 15759168 ID=Msa1181380-mRNA-1:exon:5935;Parent=Msa1181380-mRNA-1
chr8_1 five_prime_UTR 15759379 15759807 15759379 ID=Msa1181380-mRNA-1:five_prime_utr;Parent=Msa1181380-mRNA-1
chr8_1 CDS 15759168 15759378 15759168 ID=Msa1181380-mRNA-1:cds;Parent=Msa1181380-mRNA-1
chr8_1 CDS 15757040 15758235 15757040 ID=Msa1181380-mRNA-1:cds;Parent=Msa1181380-mRNA-1
chr8_1 three_prime_UTR 15756451 15757039 15756451 ID=Msa1181380-mRNA-1:three_prime_utr;Parent=Msa1181380-mRNA-1
Gene Sequence

>Msa1181380

ATGGGGTGTTTTGATGAGGTGTGTTACAATGGTGAGCTTGAAAATGGAGTGAGTTTGTTTGGGTGTAGTGAGGTTGAAGATGAGGCTAATAAAGCTGCTATTGAAGATGCTGTGAGGATTCTTTTGTTGGGTCTTGGTGAAGATATTAATAGGGAAGGTCTTAGGAAGACACCACATCGTGTTGCAAAGGCTCTACGTGAAGGAACTAGAGGTTATAGACAAAAGGTGAAGGACATTGTTGAAGGTGCTTTATTTCCTGAAGCTGGCATAGATAATAATAAAATCGGTCATGCTGGCGGTGCAGGCGGACTTGTGATTGTCCGAGACATTGACCTCTATTCCTACTGTGAATCTTGTTTGCTACCTTTCCAAGTCAAATGTCATGTCGGTTACGTCCCTTCTGGCCAAAGAGTTGTTGGATTAAGCAAGCTCTCTCGTGTCGCTGAAGTATTTGCTAAACGACTTCAAGAGCCTCAGCGTCTGGCAGACGAAGTGTGTTCAGCTTTACAACAGGGAATTCAACCAGCAGGGGTTGCCGTTGTACTTCAGTGTACACATATTCACTTTCCTGACATAGAAACAATCTTTCTAGAATCAAGCCTAAAAGGTGGGGTGAAGATACATGTTTCGTCAGGTTCCGGCGTCTTTGAAAACAAAAACGCAGACATATGGGCTGATTTCTTTTATCTTATTAAATCTAGAGGCATTGATATGGAAAATATTCATGCTCGGGGATTGCCTGACCAATGCTGGTGTCCATCTCTCTCCACTCTTTCCACCAAAGTTTCCTCCAAAACGGGACCTATCAATCCGGCAATGATCACCGCAGTATTTTCAATTCTAAAATCTTTGGGAGAAGATTCAGTTAGGAAGGAGCTTGCAGGGACTCCTAATCGTTTCGTGAAATGGCTGTTGAACTTCCAAAGCATTGACAGGGATGTGAAGCTGAATGGCTCCATCTGTGGCGGGATAAAACCTTTGAATGCTGCTGGCGAGGTGGTAAATAATGATAAACAAATATACACCGAGTTGAACTTGCCGTTTTGGTCACAATGTGAGCATCATATACTTCCATTTCACGGCGTTGTTCACGTAGGATATTTCCTTTCAGAAGGATTCAGTCCAATTGGAAAATCACTTTTACAGTCAATAGTGCATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACAAAGCAAATAGCAGAAACCATATCACCACTTTTAGGTGGAAATGTAATAGTAGTTGTAGAGGCAAGTCACACATGCATGATTTCTAGGGGAATTGAAAAGTTTGGAAGCAGTACAGCTACCATTGCTGTGTTAGGATGCTTTTCAACTGACATTGCTTCTAGGACCTTATTCTTGCAAAGTATTGCAAATGCTACATCTTCTGGAGGGTGA

Protein sequence

>Msa1181380

MGCFDEVCYNGELENGVSLFGCSEVEDEANKAAIEDAVRILLLGLGEDINREGLRKTPHRVAKALREGTRGYRQKVKDIVEGALFPEAGIDNNKIGHAGGAGGLVIVRDIDLYSYCESCLLPFQVKCHVGYVPSGQRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALQQGIQPAGVAVVLQCTHIHFPDIETIFLESSLKGGVKIHVSSGSGVFENKNADIWADFFYLIKSRGIDMENIHARGLPDQCWCPSLSTLSTKVSSKTGPINPAMITAVFSILKSLGEDSVRKELAGTPNRFVKWLLNFQSIDRDVKLNGSICGGIKPLNAAGEVVNNDKQIYTELNLPFWSQCEHHILPFHGVVHVGYFLSEGFSPIGKSLLQSIVHFYGFKLQVQERLTKQIAETISPLLGGNVIVVVEASHTCMISRGIEKFGSSTATIAVLGCFSTDIASRTLFLQSIANATSSGG*