Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141110 | sp|Q9LPL6|TOL3_ARATH | 58.523 | 528 | 171 | 13 | 1 | 506 | 1 | 502 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141110 | A0A072V220 | 98.422 | 507 | 8 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0141110 | -0.804522 | 2.075181e-49 | -8.615850e-47 |
| Msa0008330 | Msa0141110 | -0.806894 | 6.589526e-50 | -8.615850e-47 |
| Msa0017120 | Msa0141110 | -0.811495 | 6.804514e-51 | -8.615850e-47 |
| Msa0018220 | Msa0141110 | -0.815881 | 7.366863e-52 | -8.615850e-47 |
| Msa0030730 | Msa0141110 | -0.805499 | 1.296345e-49 | -8.615850e-47 |
| Msa0059960 | Msa0141110 | 0.826535 | 2.572134e-54 | -8.615850e-47 |
| Msa0075850 | Msa0141110 | -0.800263 | 1.564436e-48 | -8.615850e-47 |
| Msa0084630 | Msa0141110 | -0.802542 | 5.339837e-49 | -8.615850e-47 |
| Msa0092660 | Msa0141110 | -0.806962 | 6.376165e-50 | -8.615850e-47 |
| Msa0094420 | Msa0141110 | -0.830314 | 3.149314e-55 | -8.615850e-47 |
| Msa0097050 | Msa0141110 | -0.816002 | 6.920862e-52 | -8.615850e-47 |
| Msa0101320 | Msa0141110 | 0.828136 | 1.063270e-54 | -8.615850e-47 |
| Msa0141110 | Msa0141670 | -0.804009 | 2.653740e-49 | -8.615850e-47 |
| Msa0141110 | Msa0194570 | -0.817886 | 2.612713e-52 | -8.615850e-47 |
| Msa0141110 | Msa0207180 | -0.804876 | 1.750182e-49 | -8.615850e-47 |
| Msa0141110 | Msa0219660 | -0.803250 | 3.812632e-49 | -8.615850e-47 |
| Msa0141110 | Msa0222070 | -0.807174 | 5.749606e-50 | -8.615850e-47 |
| Msa0141110 | Msa0222120 | -0.811277 | 7.588987e-51 | -8.615850e-47 |
| Msa0141110 | Msa0227490 | -0.820710 | 5.941752e-53 | -8.615850e-47 |
| Msa0141110 | Msa0227500 | -0.821678 | 3.552933e-53 | -8.615850e-47 |
| Msa0141110 | Msa0257130 | -0.806380 | 8.461777e-50 | -8.615850e-47 |
| Msa0141110 | Msa0257930 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
| Msa0141110 | Msa0263620 | -0.812245 | 4.671166e-51 | -8.615850e-47 |
| Msa0141110 | Msa0274780 | -0.808950 | 2.407224e-50 | -8.615850e-47 |
| Msa0141110 | Msa0291040 | -0.810270 | 1.252892e-50 | -8.615850e-47 |
| Msa0141110 | Msa0295520 | -0.811316 | 7.440829e-51 | -8.615850e-47 |
| Msa0141110 | Msa0296930 | 0.820161 | 7.939380e-53 | -8.615850e-47 |
| Msa0141110 | Msa0298970 | -0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0141110 | Msa0301180 | -0.823171 | 1.598857e-53 | -8.615850e-47 |
| Msa0141110 | Msa0306130 | -0.827200 | 1.783672e-54 | -8.615850e-47 |
| Msa0141110 | Msa0314790 | -0.822300 | 2.549551e-53 | -8.615850e-47 |
| Msa0141110 | Msa0315480 | -0.812721 | 3.676677e-51 | -8.615850e-47 |
| Msa0141110 | Msa0320540 | -0.827475 | 1.533127e-54 | -8.615850e-47 |
| Msa0141110 | Msa0331780 | -0.825529 | 4.461398e-54 | -8.615850e-47 |
| Msa0141110 | Msa0332300 | 0.806712 | 7.200260e-50 | -8.615850e-47 |
| Msa0141110 | Msa0344070 | -0.818400 | 1.998982e-52 | -8.615850e-47 |
| Msa0141110 | Msa0374860 | 0.999460 | 1.835014e-313 | -8.615850e-47 |
| Msa0141110 | Msa0375080 | 0.978094 | 4.114762e-145 | -8.615850e-47 |
| Msa0141110 | Msa0378340 | -0.826350 | 2.847156e-54 | -8.615850e-47 |
| Msa0141110 | Msa0381580 | 0.808809 | 2.580015e-50 | -8.615850e-47 |
| Msa0141110 | Msa0382500 | -0.805927 | 1.054100e-49 | -8.615850e-47 |
| Msa0141110 | Msa0382560 | -0.825044 | 5.808997e-54 | -8.615850e-47 |
| Msa0141110 | Msa0388260 | 0.825820 | 3.806038e-54 | -8.615850e-47 |
| Msa0141110 | Msa0417630 | -0.809228 | 2.099438e-50 | -8.615850e-47 |
| Msa0141110 | Msa0418000 | -0.831680 | 1.455159e-55 | -8.615850e-47 |
| Msa0141110 | Msa0427520 | 0.854889 | 9.110172e-62 | -8.615850e-47 |
| Msa0141110 | Msa0427690 | -0.825289 | 5.082867e-54 | -8.615850e-47 |
| Msa0141110 | Msa0429270 | -0.818592 | 1.808365e-52 | -8.615850e-47 |
| Msa0141110 | Msa0432680 | -0.809437 | 1.893469e-50 | -8.615850e-47 |
| Msa0141110 | Msa0470350 | 0.974399 | 4.361613e-138 | -8.615850e-47 |
| Msa0141110 | Msa0473940 | 0.854324 | 1.328211e-61 | -8.615850e-47 |
| Msa0141110 | Msa0518340 | 0.835286 | 1.833447e-56 | -8.615850e-47 |
| Msa0141110 | Msa0518520 | -0.828040 | 1.121232e-54 | -8.615850e-47 |
| Msa0141110 | Msa0519200 | -0.807266 | 5.497150e-50 | -8.615850e-47 |
| Msa0141110 | Msa0524050 | -0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0141110 | Msa0524090 | -0.808828 | 2.556127e-50 | -8.615850e-47 |
| Msa0141110 | Msa0524120 | -0.836272 | 1.031390e-56 | -8.615850e-47 |
| Msa0141110 | Msa0525240 | -0.820170 | 7.900241e-53 | -8.615850e-47 |
| Msa0141110 | Msa0526130 | -0.805534 | 1.274289e-49 | -8.615850e-47 |
| Msa0141110 | Msa0538570 | -0.834387 | 3.086988e-56 | -8.615850e-47 |
| Msa0141110 | Msa0546380 | -0.812736 | 3.649516e-51 | -8.615850e-47 |
| Msa0141110 | Msa0546740 | -0.828192 | 1.030472e-54 | -8.615850e-47 |
| Msa0141110 | Msa0547050 | -0.803395 | 3.558885e-49 | -8.615850e-47 |
| Msa0141110 | Msa0567290 | -0.810811 | 9.574000e-51 | -8.615850e-47 |
| Msa0141110 | Msa0574170 | -0.822469 | 2.329494e-53 | -8.615850e-47 |
| Msa0141110 | Msa0575250 | -0.839115 | 1.921492e-57 | -8.615850e-47 |
| Msa0141110 | Msa0576420 | -0.831805 | 1.355616e-55 | -8.615850e-47 |
| Msa0141110 | Msa0594390 | -0.818057 | 2.390586e-52 | -8.615850e-47 |
| Msa0141110 | Msa0600390 | -0.801914 | 7.189274e-49 | -8.615850e-47 |
| Msa0141110 | Msa0605620 | -0.807795 | 4.246035e-50 | -8.615850e-47 |
| Msa0141110 | Msa0607600 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0141110 | Msa0619330 | -0.825604 | 4.282738e-54 | -8.615850e-47 |
| Msa0141110 | Msa0621770 | -0.810564 | 1.082685e-50 | -8.615850e-47 |
| Msa0141110 | Msa0621890 | -0.804125 | 2.510140e-49 | -8.615850e-47 |
| Msa0141110 | Msa0634270 | -0.842593 | 2.351549e-58 | -8.615850e-47 |
| Msa0141110 | Msa0640880 | -0.807389 | 5.177549e-50 | -8.615850e-47 |
| Msa0141110 | Msa0642650 | -0.808290 | 3.330137e-50 | -8.615850e-47 |
| Msa0141110 | Msa0642910 | -0.815789 | 7.721753e-52 | -8.615850e-47 |
| Msa0141110 | Msa0665910 | 0.805188 | 1.506173e-49 | -8.615850e-47 |
| Msa0141110 | Msa0678890 | -0.811353 | 7.303433e-51 | -8.615850e-47 |
| Msa0141110 | Msa0681890 | -0.831423 | 1.683617e-55 | -8.615850e-47 |
| Msa0141110 | Msa0685540 | -0.817812 | 2.716234e-52 | -8.615850e-47 |
| Msa0141110 | Msa0687860 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0141110 | Msa0694690 | 0.862047 | 6.683046e-64 | -8.615850e-47 |
| Msa0141110 | Msa0703720 | -0.802746 | 4.845814e-49 | -8.615850e-47 |
| Msa0141110 | Msa0703760 | -0.811046 | 8.513270e-51 | -8.615850e-47 |
| Msa0141110 | Msa0707780 | -0.824809 | 6.601987e-54 | -8.615850e-47 |
| Msa0141110 | Msa0722940 | -0.804596 | 2.002182e-49 | -8.615850e-47 |
| Msa0141110 | Msa0723150 | -0.810148 | 1.331067e-50 | -8.615850e-47 |
| Msa0141110 | Msa0725480 | 0.830697 | 2.537178e-55 | -8.615850e-47 |
| Msa0141110 | Msa0730180 | -0.830269 | 3.229327e-55 | -8.615850e-47 |
| Msa0141110 | Msa0739570 | -0.815570 | 8.640875e-52 | -8.615850e-47 |
| Msa0141110 | Msa0740420 | -0.825059 | 5.761629e-54 | -8.615850e-47 |
| Msa0141110 | Msa0766100 | 0.826668 | 2.390278e-54 | -8.615850e-47 |
| Msa0141110 | Msa0772210 | -0.805397 | 1.361870e-49 | -8.615850e-47 |
| Msa0141110 | Msa0782330 | -0.838438 | 2.875114e-57 | -8.615850e-47 |
| Msa0141110 | Msa0820670 | -0.818152 | 2.275171e-52 | -8.615850e-47 |
| Msa0141110 | Msa0837990 | -0.801932 | 7.130687e-49 | -8.615850e-47 |
| Msa0141110 | Msa0860270 | -0.827629 | 1.407777e-54 | -8.615850e-47 |
| Msa0141110 | Msa0925160 | -0.813573 | 2.390805e-51 | -8.615850e-47 |
| Msa0141110 | Msa0930330 | -0.834450 | 2.975689e-56 | -8.615850e-47 |
| Msa0141110 | Msa0931480 | -0.836945 | 6.947707e-57 | -8.615850e-47 |
| Msa0141110 | Msa0951710 | -0.804855 | 1.767738e-49 | -8.615850e-47 |
| Msa0141110 | Msa0955260 | -0.813664 | 2.282403e-51 | -8.615850e-47 |
| Msa0141110 | Msa0981010 | -0.801716 | 7.897356e-49 | -8.615850e-47 |
| Msa0141110 | Msa0990520 | -0.806205 | 9.209757e-50 | -8.615850e-47 |
| Msa0141110 | Msa0992590 | -0.808638 | 2.806585e-50 | -8.615850e-47 |
| Msa0141110 | Msa1002040 | -0.815172 | 1.059379e-51 | -8.615850e-47 |
| Msa0141110 | Msa1014270 | -0.820108 | 8.164726e-53 | -8.615850e-47 |
| Msa0141110 | Msa1016150 | -0.805283 | 1.438410e-49 | -8.615850e-47 |
| Msa0141110 | Msa1022310 | -0.807181 | 5.730946e-50 | -8.615850e-47 |
| Msa0141110 | Msa1027790 | -0.801940 | 7.102776e-49 | -8.615850e-47 |
| Msa0141110 | Msa1037060 | 0.812935 | 3.299747e-51 | -8.615850e-47 |
| Msa0141110 | Msa1055260 | -0.805695 | 1.179040e-49 | -8.615850e-47 |
| Msa0141110 | Msa1055280 | -0.810029 | 1.411994e-50 | -8.615850e-47 |
| Msa0141110 | Msa1061180 | -0.817034 | 4.064049e-52 | -8.615850e-47 |
| Msa0141110 | Msa1081600 | -0.800707 | 1.270053e-48 | -8.615850e-47 |
| Msa0141110 | Msa1106560 | -0.843474 | 1.370720e-58 | -8.615850e-47 |
| Msa0141110 | Msa1112610 | -0.816424 | 5.571217e-52 | -8.615850e-47 |
| Msa0141110 | Msa1125780 | -0.804462 | 2.135675e-49 | -8.615850e-47 |
| Msa0141110 | Msa1125950 | -0.802798 | 4.728381e-49 | -8.615850e-47 |
| Msa0141110 | Msa1149760 | -0.810021 | 1.417904e-50 | -8.615850e-47 |
| Msa0141110 | Msa1164800 | 0.815351 | 9.665689e-52 | -8.615850e-47 |
| Msa0141110 | Msa1171060 | 0.807880 | 4.072200e-50 | -8.615850e-47 |
| Msa0141110 | Msa1171340 | -0.807151 | 5.815367e-50 | -8.615850e-47 |
| Msa0141110 | Msa1175600 | 0.804114 | 2.523062e-49 | -8.615850e-47 |
| Msa0141110 | Msa1183390 | -0.806127 | 9.563295e-50 | -8.615850e-47 |
| Msa0141110 | Msa1201990 | -0.821763 | 3.396495e-53 | -8.615850e-47 |
| Msa0141110 | Msa1220450 | 0.838079 | 3.557877e-57 | -8.615850e-47 |
| Msa0141110 | Msa1220460 | 0.839703 | 1.352419e-57 | -8.615850e-47 |
| Msa0141110 | Msa1220480 | 0.840191 | 1.008662e-57 | -8.615850e-47 |
| Msa0141110 | Msa1221260 | -0.800579 | 1.348879e-48 | -8.615850e-47 |
| Msa0141110 | Msa1223460 | -0.820810 | 5.635082e-53 | -8.615850e-47 |
| Msa0141110 | Msa1224400 | -0.800798 | 1.217216e-48 | -8.615850e-47 |
| Msa0141110 | Msa1232860 | -0.818957 | 1.494258e-52 | -8.615850e-47 |
| Msa0141110 | Msa1235890 | -0.806955 | 6.397090e-50 | -8.615850e-47 |
| Msa0141110 | Msa1237930 | -0.824761 | 6.774594e-54 | -8.615850e-47 |
| Msa0141110 | Msa1254770 | -0.833662 | 4.689445e-56 | -8.615850e-47 |
| Msa0141110 | Msa1254800 | -0.834334 | 3.183700e-56 | -8.615850e-47 |
| Msa0141110 | Msa1258810 | -0.806417 | 8.312079e-50 | -8.615850e-47 |
| Msa0141110 | Msa1262310 | -0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0141110 | Msa1271510 | -0.809984 | 1.444163e-50 | -8.615850e-47 |
| Msa0141110 | Msa1284030 | -0.810772 | 9.762856e-51 | -8.615850e-47 |
| Msa0141110 | Msa1302150 | -0.832855 | 7.448587e-56 | -8.615850e-47 |
| Msa0141110 | Msa1309360 | -0.803768 | 2.976972e-49 | -8.615850e-47 |
| Msa0141110 | Msa1315980 | -0.811822 | 5.775996e-51 | -8.615850e-47 |
| Msa0141110 | Msa1323060 | -0.817296 | 3.550345e-52 | -8.615850e-47 |
| Msa0141110 | Msa1329990 | -0.809481 | 1.852307e-50 | -8.615850e-47 |
| Msa0141110 | Msa1337190 | -0.827564 | 1.459573e-54 | -8.615850e-47 |
| Msa0141110 | Msa1350670 | -0.805170 | 1.519379e-49 | -8.615850e-47 |
| Msa0141110 | Msa1352290 | -0.806046 | 9.950517e-50 | -8.615850e-47 |
| Msa0141110 | Msa1354040 | -0.830636 | 2.626760e-55 | -8.615850e-47 |
| Msa0141110 | Msa1355260 | -0.835846 | 1.322868e-56 | -8.615850e-47 |
| Msa0141110 | Msa1367940 | -0.815981 | 6.996138e-52 | -8.615850e-47 |
| Msa0141110 | Msa1382720 | -0.822243 | 2.629401e-53 | -8.615850e-47 |
| Msa0141110 | Msa1389120 | -0.800183 | 1.624088e-48 | -8.615850e-47 |
| Msa0141110 | Msa1399430 | -0.800308 | 1.531744e-48 | -8.615850e-47 |
| Msa0141110 | Msa1405770 | -0.826163 | 3.154928e-54 | -8.615850e-47 |
| Msa0141110 | Msa1407710 | -0.817586 | 3.053346e-52 | -8.615850e-47 |
| Msa0141110 | Msa1429830 | -0.811704 | 6.128768e-51 | -8.615850e-47 |
| Msa0141110 | Msa1435040 | -0.844759 | 6.194686e-59 | -8.615850e-47 |
| Msa0141110 | Msa1435050 | -0.846889 | 1.635396e-59 | -8.615850e-47 |
| Msa0141110 | Msa1435670 | -0.816840 | 4.493230e-52 | -8.615850e-47 |
| Msa0141110 | Msa1439670 | -0.863914 | 1.770953e-64 | -8.615850e-47 |
| Msa0141110 | Msa1439680 | -0.818735 | 1.678112e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141110 | MtrunA17_Chr3g0125541 | 98.422 | 507 | 8 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1022 |
| Msa0141110 | MtrunA17_Chr1g0157701 | 50.685 | 365 | 158 | 6 | 7 | 355 | 4 | 362 | 3.94e-112 | 347 |
| Msa0141110 | MtrunA17_Chr3g0139891 | 57.519 | 266 | 107 | 2 | 10 | 269 | 7 | 272 | 3.56e-102 | 320 |
| Msa0141110 | MtrunA17_Chr7g0244381 | 49.621 | 264 | 129 | 1 | 10 | 269 | 15 | 278 | 3.87e-86 | 280 |
| Msa0141110 | MtrunA17_Chr3g0131021 | 39.721 | 287 | 142 | 3 | 5 | 275 | 2 | 273 | 8.70e-60 | 204 |
| Msa0141110 | MtrunA17_Chr8g0385261 | 40.000 | 265 | 152 | 4 | 5 | 264 | 2 | 264 | 2.73e-56 | 193 |
| Msa0141110 | MtrunA17_Chr5g0395341 | 32.090 | 268 | 172 | 8 | 3 | 264 | 46 | 309 | 3.52e-32 | 127 |
| Msa0141110 | MtrunA17_Chr7g0261361 | 28.819 | 288 | 178 | 9 | 10 | 278 | 43 | 322 | 7.67e-23 | 100 |
| Msa0141110 | MtrunA17_Chr4g0039841 | 31.469 | 286 | 167 | 10 | 3 | 266 | 73 | 351 | 4.49e-21 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141110 | AT1G21380.1 | 58.523 | 528 | 171 | 13 | 1 | 506 | 1 | 502 | 0.0 | 541 |
| Msa0141110 | AT1G76970.2 | 53.125 | 512 | 167 | 12 | 1 | 506 | 1 | 445 | 2.82e-161 | 465 |
| Msa0141110 | AT1G76970.3 | 53.125 | 512 | 167 | 12 | 1 | 506 | 1 | 445 | 2.82e-161 | 465 |
| Msa0141110 | AT1G76970.6 | 53.125 | 512 | 167 | 12 | 1 | 506 | 1 | 445 | 2.82e-161 | 465 |
| Msa0141110 | AT1G76970.1 | 53.125 | 512 | 167 | 12 | 1 | 506 | 1 | 445 | 2.82e-161 | 465 |
| Msa0141110 | AT1G76970.7 | 50.526 | 475 | 162 | 12 | 38 | 506 | 12 | 419 | 8.81e-133 | 392 |
| Msa0141110 | AT1G76970.4 | 50.526 | 475 | 162 | 12 | 38 | 506 | 12 | 419 | 8.81e-133 | 392 |
| Msa0141110 | AT4G32760.3 | 49.133 | 346 | 164 | 4 | 7 | 347 | 4 | 342 | 8.08e-106 | 325 |
| Msa0141110 | AT1G76970.5 | 49.057 | 424 | 143 | 12 | 89 | 506 | 1 | 357 | 1.40e-105 | 320 |
| Msa0141110 | AT4G32760.1 | 49.143 | 350 | 158 | 5 | 7 | 347 | 4 | 342 | 5.06e-105 | 328 |
| Msa0141110 | AT4G32760.2 | 49.143 | 350 | 158 | 5 | 7 | 347 | 4 | 342 | 6.16e-105 | 328 |
| Msa0141110 | AT3G08790.1 | 52.060 | 267 | 116 | 3 | 9 | 269 | 6 | 266 | 3.23e-89 | 285 |
| Msa0141110 | AT2G38410.1 | 43.322 | 307 | 126 | 3 | 10 | 268 | 13 | 319 | 9.42e-73 | 244 |
| Msa0141110 | AT5G01760.1 | 42.164 | 268 | 147 | 3 | 9 | 269 | 26 | 292 | 2.09e-63 | 216 |
| Msa0141110 | AT5G63640.1 | 43.494 | 269 | 143 | 3 | 5 | 267 | 2 | 267 | 1.10e-62 | 211 |
| Msa0141110 | AT5G63640.2 | 43.494 | 269 | 143 | 3 | 5 | 267 | 2 | 267 | 1.10e-62 | 211 |
| Msa0141110 | AT5G16880.4 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 7.25e-32 | 127 |
| Msa0141110 | AT5G16880.1 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 7.25e-32 | 127 |
| Msa0141110 | AT5G16880.2 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 7.25e-32 | 127 |
| Msa0141110 | AT5G16880.3 | 33.333 | 243 | 152 | 8 | 9 | 244 | 52 | 291 | 9.95e-30 | 118 |
| Msa0141110 | AT1G06210.1 | 27.715 | 267 | 170 | 7 | 9 | 258 | 42 | 302 | 1.28e-21 | 97.1 |
| Msa0141110 | AT1G06210.2 | 30.986 | 142 | 94 | 3 | 9 | 149 | 42 | 180 | 9.18e-14 | 72.0 |
Find 125 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTGGTTTCTGTTCTT+TGG | 0.175763 | 1_3:+75858018 | None:intergenic |
| ATCTCAATATGACCTATTAT+TGG | 0.183996 | 1_3:+75857937 | None:intergenic |
| CAAGAAGCATGACACGTTTC+TGG | 0.211611 | 1_3:+75858971 | None:intergenic |
| GATGAGTCAGAAGATGATTT+TGG | 0.239011 | 1_3:-75858703 | Msa0141110:CDS |
| ATTTGATGATGCTGCTATTC+AGG | 0.241637 | 1_3:-75861184 | Msa0141110:CDS |
| CTGGTTTCTGTTCTTTGGTT+GGG | 0.252074 | 1_3:+75858023 | None:intergenic |
| CTTCTGACTCATCATCTTCA+TGG | 0.255854 | 1_3:+75858713 | None:intergenic |
| AAGAGACAGCAGCTGTGTTT+TGG | 0.269940 | 1_3:+75862435 | None:intergenic |
| ATTATATGCTGCATAGTATT+GGG | 0.271228 | 1_3:+75861723 | None:intergenic |
| GTCGGTCCTCAAAATCTTAA+AGG | 0.277622 | 1_3:-75863996 | Msa0141110:five_prime_UTR |
| ATATGACCTATTATTGGGTT+TGG | 0.302995 | 1_3:+75857943 | None:intergenic |
| TCTCAATATGACCTATTATT+GGG | 0.312570 | 1_3:+75857938 | None:intergenic |
| ATAGGCTGTCTGCTATAAAT+TGG | 0.314887 | 1_3:+75858262 | None:intergenic |
| ATTTGCTCATTGGTCCTGAT+TGG | 0.315014 | 1_3:-75863495 | Msa0141110:CDS |
| ATAGCGGATGAGGTGGGATT+AGG | 0.317539 | 1_3:+75858331 | None:intergenic |
| AATCAAATCGCTTCTCAATT+CGG | 0.328474 | 1_3:-75863907 | Msa0141110:five_prime_UTR |
| GATGCATGGCAAGAAGCTTT+TGG | 0.329126 | 1_3:-75861766 | Msa0141110:CDS |
| TGCATATACCCATATGTATA+TGG | 0.336397 | 1_3:-75857760 | Msa0141110:three_prime_UTR |
| TCCTAAACACAACCACAAAA+TGG | 0.348176 | 1_3:+75857842 | None:intergenic |
| GATATCACCTCGGGGTCTTT+CGG | 0.348200 | 1_3:+75859999 | None:intergenic |
| GGCATCTTTGATGCTGGTGG+TGG | 0.350846 | 1_3:+75858466 | None:intergenic |
| AACCGCTGCCTCCAGCTCCC+TGG | 0.359253 | 1_3:-75858207 | Msa0141110:CDS |
| TCTGGTTTCTGTTCTTTGGT+TGG | 0.364136 | 1_3:+75858022 | None:intergenic |
| TTGATTCATTGGAGACGATA+TGG | 0.364861 | 1_3:-75863557 | Msa0141110:exon |
| ATCTTTGATGCTGGTGGTGG+GGG | 0.364963 | 1_3:+75858469 | None:intergenic |
| TGTCTCTGATTATACTTTGA+AGG | 0.370774 | 1_3:+75858151 | None:intergenic |
| TTCGTCTACTGACAGCTTGC+TGG | 0.373432 | 1_3:-75858080 | Msa0141110:CDS |
| CATCCTCCAAACCCAATAAT+AGG | 0.377350 | 1_3:-75857949 | Msa0141110:CDS |
| AAGTATGAACCATATACATA+TGG | 0.387000 | 1_3:+75857751 | None:intergenic |
| ATGAATTGTGAATGTTCATT+TGG | 0.389437 | 1_3:-75857880 | Msa0141110:three_prime_UTR |
| TAGCGGATGAGGTGGGATTA+GGG | 0.392358 | 1_3:+75858332 | None:intergenic |
| CATTATATGCTGCATAGTAT+TGG | 0.394535 | 1_3:+75861722 | None:intergenic |
| CCAACATAAGCAACAAGAAA+AGG | 0.397411 | 1_3:+75857908 | None:intergenic |
| GCGTGATATATTACACGAAA+TGG | 0.398151 | 1_3:-75861965 | Msa0141110:CDS |
| TCTTTGAAAAGGGCATCTTC+TGG | 0.400879 | 1_3:+75858004 | None:intergenic |
| GCATCTTTGATGCTGGTGGT+GGG | 0.400965 | 1_3:+75858467 | None:intergenic |
| CAGCGGTTCTGAAGTCTTCA+TGG | 0.405100 | 1_3:+75858222 | None:intergenic |
| GCGAAAGGAACTGCTAATTC+AGG | 0.408666 | 1_3:-75858781 | Msa0141110:CDS |
| TGGTTTCTGTTCTTTGGTTG+GGG | 0.408861 | 1_3:+75858024 | None:intergenic |
| GCAACCAGTGATTTGCTCAT+TGG | 0.412156 | 1_3:-75863505 | Msa0141110:CDS |
| TTTGCTCATTGGTCCTGATT+GGG | 0.413807 | 1_3:-75863494 | Msa0141110:CDS |
| TCGCAATATTGTCATGTTGA+AGG | 0.414484 | 1_3:+75858800 | None:intergenic |
| AATCAACTAGATCTTTGAAA+AGG | 0.414664 | 1_3:+75857993 | None:intergenic |
| ACATGTACAAGTGGCAGAAC+TGG | 0.424522 | 1_3:+75858739 | None:intergenic |
| AGTCAGATGCATCCGACCTT+AGG | 0.429675 | 1_3:-75861152 | Msa0141110:intron |
| CATCTTTGATGCTGGTGGTG+GGG | 0.432270 | 1_3:+75858468 | None:intergenic |
| CTCTGATTATACTTTGAAGG+TGG | 0.432987 | 1_3:+75858154 | None:intergenic |
| AGGTAGTAGTGGCATGAGGA+TGG | 0.438987 | 1_3:+75858290 | None:intergenic |
| ATCTGGTTGCAAACAGAGAA+TGG | 0.439921 | 1_3:-75857663 | Msa0141110:three_prime_UTR |
| TTAACAATCGGTTGAGTTTG+AGG | 0.441299 | 1_3:+75861219 | None:intergenic |
| GGAGATGGCTCATCATATAT+AGG | 0.453485 | 1_3:+75858244 | None:intergenic |
| TCCCAGGGAGCTGGAGGCAG+CGG | 0.453746 | 1_3:+75858205 | None:intergenic |
| GAAGATAATTAAGAAGCGCT+TGG | 0.458456 | 1_3:-75862470 | Msa0141110:CDS |
| ACCGCTGCCTCCAGCTCCCT+GGG | 0.462381 | 1_3:-75858206 | Msa0141110:CDS |
| TGACCTATTATTGGGTTTGG+AGG | 0.469760 | 1_3:+75857946 | None:intergenic |
| AAGATAATTAAGAAGCGCTT+GGG | 0.476491 | 1_3:-75862469 | Msa0141110:CDS |
| TTTCTGTTCTTTGGTTGGGG+TGG | 0.479671 | 1_3:+75858027 | None:intergenic |
| TTGTAAAGGAGTTGATTCAT+TGG | 0.482903 | 1_3:-75863568 | Msa0141110:five_prime_UTR |
| ATCAACTAGATCTTTGAAAA+GGG | 0.485078 | 1_3:+75857994 | None:intergenic |
| CTCTCTAGGAATAGCGGATG+AGG | 0.485199 | 1_3:+75858321 | None:intergenic |
| GGTTGTGTTTAGGAAGCATT+CGG | 0.486887 | 1_3:-75857833 | Msa0141110:three_prime_UTR |
| TGATTATACTTTGAAGGTGG+GGG | 0.487825 | 1_3:+75858157 | None:intergenic |
| TCAATGTTGATAGCCCAATC+AGG | 0.495239 | 1_3:+75863481 | None:intergenic |
| GCTTGTGTATCCCAGGGAGC+TGG | 0.497061 | 1_3:+75858196 | None:intergenic |
| GACAGGAGCTTGTGTATCCC+AGG | 0.497968 | 1_3:+75858189 | None:intergenic |
| CAACATAAGCAACAAGAAAA+GGG | 0.506970 | 1_3:+75857909 | None:intergenic |
| TCTGATTATACTTTGAAGGT+GGG | 0.508439 | 1_3:+75858155 | None:intergenic |
| GAGTTCATCCTCACTGACTC+TGG | 0.514966 | 1_3:+75858499 | None:intergenic |
| CTGATTATACTTTGAAGGTG+GGG | 0.515817 | 1_3:+75858156 | None:intergenic |
| TGCAGCATATAATGAACTAA+AGG | 0.517669 | 1_3:-75861713 | Msa0141110:intron |
| TGTTCATTTGGTTTAGCTTG+AGG | 0.520655 | 1_3:-75857868 | Msa0141110:three_prime_UTR |
| GAGATACTCATACACAGATT+CGG | 0.522064 | 1_3:-75858525 | Msa0141110:CDS |
| ACACTAACGCATAAAAGAGA+TGG | 0.527995 | 1_3:+75857698 | None:intergenic |
| TCTGCAGCAGAATTAACAAT+CGG | 0.530853 | 1_3:+75861207 | None:intergenic |
| TCTGAAGTCTTCATGGGAGA+TGG | 0.531151 | 1_3:+75858229 | None:intergenic |
| TCGTCTACTGACAGCTTGCT+GGG | 0.535234 | 1_3:-75858079 | Msa0141110:CDS |
| CAAAATATGTCAGGGCGTGA+AGG | 0.535246 | 1_3:-75859034 | Msa0141110:intron |
| AGAGGAGCTGCAAATGAAGT+TGG | 0.537265 | 1_3:+75858364 | None:intergenic |
| TCTTAGTGGTGATGCATACA+AGG | 0.537375 | 1_3:-75858413 | Msa0141110:CDS |
| GGTTCATCTCATTCAAGTAA+TGG | 0.537379 | 1_3:-75858109 | Msa0141110:CDS |
| TCAAAGATGCCAGTCTACTC+TGG | 0.537786 | 1_3:-75858454 | Msa0141110:CDS |
| GTTTGAGGAGGTGTGAAGAA+TGG | 0.551390 | 1_3:+75861234 | None:intergenic |
| CACTAACGCATAAAAGAGAT+GGG | 0.552637 | 1_3:+75857699 | None:intergenic |
| AGTATGAACCATATACATAT+GGG | 0.553633 | 1_3:+75857752 | None:intergenic |
| CAAATAAAAGAAAGAAAAGT+CGG | 0.554466 | 1_3:-75864014 | Msa0141110:five_prime_UTR |
| TAGACTGGCATCTTTGATGC+TGG | 0.555060 | 1_3:+75858460 | None:intergenic |
| GGTTAAGATAGTGAAGAAGC+GGG | 0.556219 | 1_3:-75861944 | Msa0141110:intron |
| TTATATGCTGCATAGTATTG+GGG | 0.557867 | 1_3:+75861724 | None:intergenic |
| AGCACGGTTGACTATCTTAG+TGG | 0.568503 | 1_3:-75858427 | Msa0141110:CDS |
| GGATGGGTTGAAGACTCTCT+AGG | 0.571085 | 1_3:+75858307 | None:intergenic |
| AGGACCAATGAGCAAATCAC+TGG | 0.572265 | 1_3:+75863501 | None:intergenic |
| ACTGGCATCTTTGATGCTGG+TGG | 0.583559 | 1_3:+75858463 | None:intergenic |
| AATTGGTGATGAGGTAGTAG+TGG | 0.585150 | 1_3:+75858279 | None:intergenic |
| CAACATGACAATATTGCGAA+AGG | 0.596738 | 1_3:-75858796 | Msa0141110:CDS |
| ATATCATTAACATGGACCCT+AGG | 0.596855 | 1_3:-75863450 | Msa0141110:intron |
| TCATGGTTTACATGTACAAG+TGG | 0.597818 | 1_3:+75858730 | None:intergenic |
| CTAGGAATAGCGGATGAGGT+GGG | 0.601814 | 1_3:+75858325 | None:intergenic |
| GTTTCTGGTAAGAACGGCAC+TGG | 0.602167 | 1_3:+75858986 | None:intergenic |
| TCTAGGAATAGCGGATGAGG+TGG | 0.605134 | 1_3:+75858324 | None:intergenic |
| TTATATTTGTAGGCAAGCAA+AGG | 0.605384 | 1_3:-75862500 | Msa0141110:intron |
| TGGTTAAGATAGTGAAGAAG+CGG | 0.607102 | 1_3:-75861945 | Msa0141110:CDS |
| TGTGTATCCCAGGGAGCTGG+AGG | 0.607755 | 1_3:+75858199 | None:intergenic |
| AGCGGTTCTGAAGTCTTCAT+GGG | 0.615246 | 1_3:+75858223 | None:intergenic |
| GTTGAAGGAGTACTCGCTGA+AGG | 0.616029 | 1_3:+75858815 | None:intergenic |
| GGTAGTAGTGGCATGAGGAT+GGG | 0.618700 | 1_3:+75858291 | None:intergenic |
| GTGCTAGTACCAGAGTAGAC+TGG | 0.618718 | 1_3:+75858445 | None:intergenic |
| GGTGATGCATACAAGGCAGA+AGG | 0.619741 | 1_3:-75858406 | Msa0141110:CDS |
| AATATGTCAGGGCGTGAAGG+AGG | 0.620328 | 1_3:-75859031 | Msa0141110:intron |
| TCTGCTATAAATTGGTGATG+AGG | 0.626318 | 1_3:+75858270 | None:intergenic |
| ATGTGAACTAAATACACACA+TGG | 0.633578 | 1_3:+75857804 | None:intergenic |
| TGGTGGAAATTCAACTCCAG+CGG | 0.635802 | 1_3:+75861275 | None:intergenic |
| GTACAAAGAGCACCTAAGGT+CGG | 0.637450 | 1_3:+75861140 | None:intergenic |
| CTCAGCCGGACTTAAGTGTG+AGG | 0.638020 | 1_3:-75861810 | Msa0141110:intron |
| TGAAGACTCTCTAGGAATAG+CGG | 0.642392 | 1_3:+75858315 | None:intergenic |
| GGATTAGGGCTAGAATGAAG+AGG | 0.647154 | 1_3:+75858346 | None:intergenic |
| ACAGGAGCTTGTGTATCCCA+GGG | 0.649202 | 1_3:+75858190 | None:intergenic |
| TGACACGTTTCTGGTAAGAA+CGG | 0.650994 | 1_3:+75858980 | None:intergenic |
| ACAATCGGTTGAGTTTGAGG+AGG | 0.657220 | 1_3:+75861222 | None:intergenic |
| AGTCTACTCTGGTACTAGCA+CGG | 0.660902 | 1_3:-75858443 | Msa0141110:CDS |
| TCAGCCGGACTTAAGTGTGA+GGG | 0.669116 | 1_3:-75861809 | Msa0141110:intron |
| TATATGCTGCATAGTATTGG+GGG | 0.675300 | 1_3:+75861725 | None:intergenic |
| ATTGTGTGATATCATTAACA+TGG | 0.682485 | 1_3:-75863458 | Msa0141110:CDS |
| TTCGGAAACCAGAGTCAGTG+AGG | 0.691532 | 1_3:-75858507 | Msa0141110:CDS |
| GATGAGGTAGTAGTGGCATG+AGG | 0.699881 | 1_3:+75858286 | None:intergenic |
| TTTGAATCCGAAAGACCCCG+AGG | 0.741330 | 1_3:-75860006 | Msa0141110:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGGTTAATAAATAATATT+AGG | - | chr1_3:75859601-75859620 | Msa0141110:intron | 10.0% |
| !!! | ATTATATATTGATAATAACA+GGG | - | chr1_3:75860669-75860688 | Msa0141110:intron | 10.0% |
| !! | TAACTAAAACAAATAATTAA+AGG | + | chr1_3:75862067-75862086 | None:intergenic | 10.0% |
| !!! | TGATAATTTGATATTGTTTT+AGG | - | chr1_3:75858128-75858147 | Msa0141110:CDS | 15.0% |
| !!! | TTCTATCAATTTTAATACTA+TGG | - | chr1_3:75858986-75859005 | Msa0141110:CDS | 15.0% |
| !!! | AACCTAAATTTTATGAAAAT+AGG | - | chr1_3:75859045-75859064 | Msa0141110:intron | 15.0% |
| !!! | TAAATTTTATGAAAATAGGA+GGG | - | chr1_3:75859049-75859068 | Msa0141110:intron | 15.0% |
| !! | AGAAAGAATAAATTCAAAAA+TGG | + | chr1_3:75859092-75859111 | None:intergenic | 15.0% |
| !! | TATCAAATATTTCATCTATT+TGG | - | chr1_3:75859344-75859363 | Msa0141110:intron | 15.0% |
| !!! | TAAAAAATTATCTTTTTACG+AGG | - | chr1_3:75859458-75859477 | Msa0141110:intron | 15.0% |
| !! | TAAATAATATTAGGTGAATT+TGG | - | chr1_3:75859610-75859629 | Msa0141110:intron | 15.0% |
| !!! | CATTATATATTGATAATAAC+AGG | - | chr1_3:75860668-75860687 | Msa0141110:intron | 15.0% |
| !!! | TGAATTTGAGTTTTATAAAA+GGG | + | chr1_3:75860707-75860726 | None:intergenic | 15.0% |
| !!! | TTGAATTTGAGTTTTATAAA+AGG | + | chr1_3:75860708-75860727 | None:intergenic | 15.0% |
| !! | AACAAAACAAAAAAAAGTAA+AGG | + | chr1_3:75861021-75861040 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTCTTCTTCTT+TGG | - | chr1_3:75861328-75861347 | Msa0141110:intron | 15.0% |
| !!! | AGTTTAGTTTTTATTGTTTA+TGG | - | chr1_3:75861787-75861806 | Msa0141110:CDS | 15.0% |
| !!! | GTTTAGTTTTTATTGTTTAT+GGG | - | chr1_3:75861788-75861807 | Msa0141110:CDS | 15.0% |
| !!! | TTTAGTTTTTATTGTTTATG+GGG | - | chr1_3:75861789-75861808 | Msa0141110:CDS | 15.0% |
| !!! | TACATTAATTTTGCTAAAAT+GGG | + | chr1_3:75861918-75861937 | None:intergenic | 15.0% |
| !!! | TTACATTAATTTTGCTAAAA+TGG | + | chr1_3:75861919-75861938 | None:intergenic | 15.0% |
| !! | CAAATAAAAGAAAGAAAAGT+CGG | - | chr1_3:75857707-75857726 | Msa0141110:three_prime_UTR | 20.0% |
| !!! | TATTTTTGTTAAGAGGTTTT+AGG | - | chr1_3:75857945-75857964 | Msa0141110:CDS | 20.0% |
| !!! | TATTGTTTTAGGTTTTGTAA+AGG | - | chr1_3:75858139-75858158 | Msa0141110:CDS | 20.0% |
| !!! | TTTTGTTGAAATTCTTGAAA+AGG | - | chr1_3:75858596-75858615 | Msa0141110:intron | 20.0% |
| !! | TTTGTTGAAATTCTTGAAAA+GGG | - | chr1_3:75858597-75858616 | Msa0141110:intron | 20.0% |
| !! | TAAATGTGATACATTAATAG+TGG | + | chr1_3:75858639-75858658 | None:intergenic | 20.0% |
| !! | TTAGTGATAAGATATTAAGA+CGG | - | chr1_3:75858830-75858849 | Msa0141110:CDS | 20.0% |
| !!! | CTCCTATTTTCATAAAATTT+AGG | + | chr1_3:75859050-75859069 | None:intergenic | 20.0% |
| !!! | CTAAATTTTATGAAAATAGG+AGG | - | chr1_3:75859048-75859067 | Msa0141110:intron | 20.0% |
| !!! | CTTGTTTTTATTTTTCTCAT+GGG | - | chr1_3:75859160-75859179 | Msa0141110:intron | 20.0% |
| !!! | GTGTTATATTCTTTTAATCT+TGG | - | chr1_3:75859316-75859335 | Msa0141110:intron | 20.0% |
| !! | TTTCATCTATTTGGATATAA+TGG | - | chr1_3:75859353-75859372 | Msa0141110:intron | 20.0% |
| !! | TTCATCTATTTGGATATAAT+GGG | - | chr1_3:75859354-75859373 | Msa0141110:intron | 20.0% |
| !! | TTTAACACACTTGATATTAT+TGG | - | chr1_3:75859406-75859425 | Msa0141110:intron | 20.0% |
| !! | AGAGAATAAACTAATAATGA+AGG | - | chr1_3:75859499-75859518 | Msa0141110:intron | 20.0% |
| !! | ACAGTAAAAAAATTACTATG+AGG | + | chr1_3:75859579-75859598 | None:intergenic | 20.0% |
| !!! | GTAATTTTTTTACTGTTCAA+TGG | - | chr1_3:75859583-75859602 | Msa0141110:intron | 20.0% |
| !!! | AATTTTCTATTTTGTGTTTG+AGG | + | chr1_3:75860375-75860394 | None:intergenic | 20.0% |
| !!! | GAATTTGAGTTTTATAAAAG+GGG | + | chr1_3:75860706-75860725 | None:intergenic | 20.0% |
| !!! | CAAATTTTTCATTTTTTGCA+TGG | - | chr1_3:75860743-75860762 | Msa0141110:intron | 20.0% |
| !! | TATAAAAACCAACAATTGAT+CGG | + | chr1_3:75860789-75860808 | None:intergenic | 20.0% |
| !! | GCATTTAATCATATATCTTT+AGG | - | chr1_3:75860957-75860976 | Msa0141110:intron | 20.0% |
| !!! | GAATTAATATGAACATTTTC+TGG | + | chr1_3:75861283-75861302 | None:intergenic | 20.0% |
| !! | AATGTTCATATTAATTCCTT+AGG | - | chr1_3:75861286-75861305 | Msa0141110:intron | 20.0% |
| !!! | TTTTTTAGTCAGAATATGTT+TGG | - | chr1_3:75862090-75862109 | Msa0141110:intron | 20.0% |
| !!! | TAATTGAGTTGCTTTATTTT+AGG | - | chr1_3:75862842-75862861 | Msa0141110:intron | 20.0% |
| !!! | AATTGAGTTGCTTTATTTTA+GGG | - | chr1_3:75862843-75862862 | Msa0141110:intron | 20.0% |
| !!! | AATACTCCTTTAAGATTTTG+AGG | + | chr1_3:75857734-75857753 | None:intergenic | 25.0% |
| ! | TGTGAAAATAGAGAAAAAGA+GGG | + | chr1_3:75857852-75857871 | None:intergenic | 25.0% |
| ! | ATTGTGTGATATCATTAACA+TGG | - | chr1_3:75858263-75858282 | Msa0141110:CDS | 25.0% |
| ! | ATGTGAATTAACAATACCTA+GGG | + | chr1_3:75858290-75858309 | None:intergenic | 25.0% |
| ! | AATGTGAATTAACAATACCT+AGG | + | chr1_3:75858291-75858310 | None:intergenic | 25.0% |
| ! | ATGTACATATGCACATTAAA+AGG | + | chr1_3:75858431-75858450 | None:intergenic | 25.0% |
| ! | CCTTAAATGCAAAAAGAAAT+GGG | + | chr1_3:75858542-75858561 | None:intergenic | 25.0% |
| ! | TCCTTAAATGCAAAAAGAAA+TGG | + | chr1_3:75858543-75858562 | None:intergenic | 25.0% |
| ! | TTGTTGAAATTCTTGAAAAG+GGG | - | chr1_3:75858598-75858617 | Msa0141110:intron | 25.0% |
| !! | AATCAAAGAATTTTTCCAAC+AGG | + | chr1_3:75858881-75858900 | None:intergenic | 25.0% |
| ! | ATATTGCTGCAATTAGAAAT+AGG | - | chr1_3:75859014-75859033 | Msa0141110:CDS | 25.0% |
| ! | TATTGCTGCAATTAGAAATA+GGG | - | chr1_3:75859015-75859034 | Msa0141110:CDS | 25.0% |
| !! | TCTTTCTTTCTTTGTAGTTT+TGG | - | chr1_3:75859109-75859128 | Msa0141110:intron | 25.0% |
| ! | CCATGAGAAAAATAAAAACA+AGG | + | chr1_3:75859162-75859181 | None:intergenic | 25.0% |
| !!! | CCTTGTTTTTATTTTTCTCA+TGG | - | chr1_3:75859159-75859178 | Msa0141110:intron | 25.0% |
| ! | TATAATCAGAAGAGATGATT+AGG | + | chr1_3:75859206-75859225 | None:intergenic | 25.0% |
| ! | TCTCTTCTGATTATATTTGT+AGG | - | chr1_3:75859211-75859230 | Msa0141110:intron | 25.0% |
| ! | TATGTTAACTTTGTAGAGAA+TGG | + | chr1_3:75859433-75859452 | None:intergenic | 25.0% |
| ! | ACTACTACTAGAATTATTCT+TGG | - | chr1_3:75859529-75859548 | Msa0141110:intron | 25.0% |
| ! | CTACTACTAGAATTATTCTT+GGG | - | chr1_3:75859530-75859549 | Msa0141110:intron | 25.0% |
| !! | TTCATATTTTATGTAGGTAC+TGG | - | chr1_3:75859684-75859703 | Msa0141110:intron | 25.0% |
| !!! | TATGTATTGATTTTTGACAC+TGG | - | chr1_3:75859800-75859819 | Msa0141110:intron | 25.0% |
| ! | TCAAAAATTTAGTTGCAGAA+AGG | + | chr1_3:75859845-75859864 | None:intergenic | 25.0% |
| !!! | TACTGATTTTAATTGATGCA+TGG | - | chr1_3:75859941-75859960 | Msa0141110:intron | 25.0% |
| ! | ATTATATGCTGCATAGTATT+GGG | + | chr1_3:75860001-75860020 | None:intergenic | 25.0% |
| ! | ATATAATGAACTAAAGGTGA+TGG | - | chr1_3:75860014-75860033 | Msa0141110:CDS | 25.0% |
| ! | TACTTGCATTATTAACTCTT+TGG | - | chr1_3:75860328-75860347 | Msa0141110:intron | 25.0% |
| !!! | TTGTTGCTTTTTGAATTAAC+AGG | - | chr1_3:75860423-75860442 | Msa0141110:intron | 25.0% |
| ! | CAAAATAAACAAGTGTATGA+TGG | + | chr1_3:75860608-75860627 | None:intergenic | 25.0% |
| !!! | TTATTTTGTGTTTGTTGTGT+AGG | - | chr1_3:75860620-75860639 | Msa0141110:intron | 25.0% |
| !!! | TATTTTGTGTTTGTTGTGTA+GGG | - | chr1_3:75860621-75860640 | Msa0141110:intron | 25.0% |
| !! | TGATAATAACAGGGTATTTA+AGG | - | chr1_3:75860678-75860697 | Msa0141110:intron | 25.0% |
| ! | GAGAAATTAATGTTACAAAG+CGG | + | chr1_3:75860843-75860862 | None:intergenic | 25.0% |
| ! | ATATTATGTCTCACAGTAAA+TGG | + | chr1_3:75860889-75860908 | None:intergenic | 25.0% |
| !! | TTTTCCTACCTAGTTAAATA+TGG | - | chr1_3:75861047-75861066 | Msa0141110:intron | 25.0% |
| !!! | TGATTTTTTCTTCATAGAGT+TGG | - | chr1_3:75861085-75861104 | Msa0141110:intron | 25.0% |
| !! | AATTTCTCACAATTTTCTAC+AGG | - | chr1_3:75861108-75861127 | Msa0141110:intron | 25.0% |
| !! | CTAATAGTAGAATGGTATTT+TGG | - | chr1_3:75861219-75861238 | Msa0141110:CDS | 25.0% |
| ! | TAGAGATTAAAAATGCTCAA+GGG | - | chr1_3:75861660-75861679 | Msa0141110:intron | 25.0% |
| ! | TGTAAACGATTGAACATAAA+TGG | + | chr1_3:75861765-75861784 | None:intergenic | 25.0% |
| !!! | ACTTTAAAGTTGCTGTATTT+TGG | - | chr1_3:75861825-75861844 | Msa0141110:intron | 25.0% |
| ! | TTAGCAAAATTAATGTAAGC+TGG | - | chr1_3:75861921-75861940 | Msa0141110:intron | 25.0% |
| ! | TATCTATCAAGAAACTCAAA+AGG | + | chr1_3:75862042-75862061 | None:intergenic | 25.0% |
| ! | ATCTTCCTGTAATACAATAT+TGG | - | chr1_3:75862540-75862559 | Msa0141110:intron | 25.0% |
| ! | TAGATCCAATATTGTATTAC+AGG | + | chr1_3:75862548-75862567 | None:intergenic | 25.0% |
| ! | GTAATTAATAACACCAGTAA+TGG | - | chr1_3:75862818-75862837 | Msa0141110:intron | 25.0% |
| !! | AATATAACACGAGAACTTTT+GGG | + | chr1_3:75863064-75863083 | None:intergenic | 25.0% |
| ! | GATTTCAATACTGTAATTTC+AGG | - | chr1_3:75863166-75863185 | Msa0141110:intron | 25.0% |
| !! | ATCAACTAGATCTTTGAAAA+GGG | + | chr1_3:75863730-75863749 | None:intergenic | 25.0% |
| !! | AATCAACTAGATCTTTGAAA+AGG | + | chr1_3:75863731-75863750 | None:intergenic | 25.0% |
| ! | TCTCAATATGACCTATTATT+GGG | + | chr1_3:75863786-75863805 | None:intergenic | 25.0% |
| ! | ATCTCAATATGACCTATTAT+TGG | + | chr1_3:75863787-75863806 | None:intergenic | 25.0% |
| ! | ATGAATTGTGAATGTTCATT+TGG | - | chr1_3:75863841-75863860 | Msa0141110:intron | 25.0% |
| ! | AGTATGAACCATATACATAT+GGG | + | chr1_3:75863972-75863991 | None:intergenic | 25.0% |
| ! | AAGTATGAACCATATACATA+TGG | + | chr1_3:75863973-75863992 | None:intergenic | 25.0% |
| !! | AGTGTTTTCTTCAAATAATC+TGG | - | chr1_3:75864041-75864060 | Msa0141110:five_prime_UTR | 25.0% |
| !! | CTTTTATTTGTTGCTTCTTC+TGG | + | chr1_3:75857697-75857716 | None:intergenic | 30.0% |
| AATCAAATCGCTTCTCAATT+CGG | - | chr1_3:75857814-75857833 | Msa0141110:three_prime_UTR | 30.0% | |
| CTGTGAAAATAGAGAAAAAG+AGG | + | chr1_3:75857853-75857872 | None:intergenic | 30.0% | |
| ! | TTTCTCTATTTTCACAGCTA+AGG | - | chr1_3:75857856-75857875 | Msa0141110:three_prime_UTR | 30.0% |
| CGATCGATGATATAATAGAA+GGG | + | chr1_3:75857909-75857928 | None:intergenic | 30.0% | |
| TCGATCGATGATATAATAGA+AGG | + | chr1_3:75857910-75857929 | None:intergenic | 30.0% | |
| !!! | TCTCTGCTATTTTTGTTAAG+AGG | - | chr1_3:75857938-75857957 | Msa0141110:exon | 30.0% |
| AATAGATCGAATTTGAGTGA+TGG | + | chr1_3:75857988-75858007 | None:intergenic | 30.0% | |
| AGTCAACTCAATAAGAATAG+AGG | + | chr1_3:75858021-75858040 | None:intergenic | 30.0% | |
| ! | TTGTAAAGGAGTTGATTCAT+TGG | - | chr1_3:75858153-75858172 | Msa0141110:CDS | 30.0% |
| TTGAACGTAATCACATGTTT+CGG | - | chr1_3:75858346-75858365 | Msa0141110:CDS | 30.0% | |
| TAGATATGTCATATCTAGCA+CGG | + | chr1_3:75858407-75858426 | None:intergenic | 30.0% | |
| !! | TTTGAAGCTTGCTATGTTAT+GGG | - | chr1_3:75858470-75858489 | Msa0141110:CDS | 30.0% |
| ! | CCCATTTCTTTTTGCATTTA+AGG | - | chr1_3:75858539-75858558 | Msa0141110:intron | 30.0% |
| TGTTGAAATTCTTGAAAAGG+GGG | - | chr1_3:75858599-75858618 | Msa0141110:intron | 30.0% | |
| !!! | AGTACTCGTCTTTTTTGATT+TGG | - | chr1_3:75858662-75858681 | Msa0141110:intron | 30.0% |
| !!! | TTTTTTGATTTGGACATGTG+TGG | - | chr1_3:75858672-75858691 | Msa0141110:intron | 30.0% |
| TTATATTTGTAGGCAAGCAA+AGG | - | chr1_3:75859221-75859240 | Msa0141110:intron | 30.0% | |
| !! | AAGATAATTAAGAAGCGCTT+GGG | - | chr1_3:75859252-75859271 | Msa0141110:intron | 30.0% |
| AAAATAGTGATTACCTGACA+TGG | - | chr1_3:75859657-75859676 | Msa0141110:intron | 30.0% | |
| ! | GGACACTTCATATTTTATGT+AGG | - | chr1_3:75859678-75859697 | Msa0141110:intron | 30.0% |
| !!! | TTCACCGCAATTTTTAGTAA+GGG | + | chr1_3:75859713-75859732 | None:intergenic | 30.0% |
| !!! | TTTCACCGCAATTTTTAGTA+AGG | + | chr1_3:75859714-75859733 | None:intergenic | 30.0% |
| !! | CTGCAACTAAATTTTTGAAG+AGG | - | chr1_3:75859847-75859866 | Msa0141110:intron | 30.0% |
| ! | TTTTAATCTAATTGCTCAGC+CGG | - | chr1_3:75859897-75859916 | Msa0141110:intron | 30.0% |
| TTATATGCTGCATAGTATTG+GGG | + | chr1_3:75860000-75860019 | None:intergenic | 30.0% | |
| CATTATATGCTGCATAGTAT+TGG | + | chr1_3:75860002-75860021 | None:intergenic | 30.0% | |
| TGCAGCATATAATGAACTAA+AGG | - | chr1_3:75860008-75860027 | Msa0141110:CDS | 30.0% | |
| TAAACAGCAACATTTATCAC+AGG | + | chr1_3:75860138-75860157 | None:intergenic | 30.0% | |
| !! | AAATGTTGCTGTTTACATAC+TGG | - | chr1_3:75860143-75860162 | Msa0141110:intron | 30.0% |
| AAAAATACAATGATGACCAC+AGG | + | chr1_3:75860246-75860265 | None:intergenic | 30.0% | |
| ! | TGGTCATCATTGTATTTTTC+TGG | - | chr1_3:75860247-75860266 | Msa0141110:intron | 30.0% |
| !!! | TTCTGGTATTTTTAGTAAGC+TGG | - | chr1_3:75860264-75860283 | Msa0141110:intron | 30.0% |
| GTATGCACTTGTACAATTAA+TGG | + | chr1_3:75860294-75860313 | None:intergenic | 30.0% | |
| ATAATATGCAGATTCCATAG+CGG | - | chr1_3:75860902-75860921 | Msa0141110:intron | 30.0% | |
| AGATAAGTAGGTAAACATGT+AGG | + | chr1_3:75860934-75860953 | None:intergenic | 30.0% | |
| ATTAAATGCTGCAGATAAGT+AGG | + | chr1_3:75860946-75860965 | None:intergenic | 30.0% | |
| CATTCCATATTTAACTAGGT+AGG | + | chr1_3:75861054-75861073 | None:intergenic | 30.0% | |
| CTACCTAGTTAAATATGGAA+TGG | - | chr1_3:75861052-75861071 | Msa0141110:intron | 30.0% | |
| TCTCCATTCCATATTTAACT+AGG | + | chr1_3:75861058-75861077 | None:intergenic | 30.0% | |
| ATACCATTCTACTATTAGAC+AGG | + | chr1_3:75861217-75861236 | None:intergenic | 30.0% | |
| ATTCATGTGTTGAACAGTAA+GGG | - | chr1_3:75861351-75861370 | Msa0141110:intron | 30.0% | |
| !! | TTAAGGTGGACTAATAACAA+GGG | + | chr1_3:75861452-75861471 | None:intergenic | 30.0% |
| ! | TTGTTATTAGTCCACCTTAA+GGG | - | chr1_3:75861452-75861471 | Msa0141110:intron | 30.0% |
| AAAAAAATAGTCAGAGAGAG+AGG | + | chr1_3:75861624-75861643 | None:intergenic | 30.0% | |
| CTAGAGATTAAAAATGCTCA+AGG | - | chr1_3:75861659-75861678 | Msa0141110:intron | 30.0% | |
| ATGAAAAGATGATATCACCT+CGG | + | chr1_3:75861735-75861754 | None:intergenic | 30.0% | |
| CAAAATTAATGTAAGCTGGT+TGG | - | chr1_3:75861925-75861944 | Msa0141110:intron | 30.0% | |
| TTTATCGTGTCAATCTTTCA+AGG | - | chr1_3:75862208-75862227 | Msa0141110:intron | 30.0% | |
| TTGTATTACAGGAAGATTGA+AGG | + | chr1_3:75862537-75862556 | None:intergenic | 30.0% | |
| !! | GTTGCTGTTTCTTAATATTC+TGG | - | chr1_3:75862663-75862682 | Msa0141110:intron | 30.0% |
| TATTCTGGACAAAATATGTC+AGG | - | chr1_3:75862678-75862697 | Msa0141110:intron | 30.0% | |
| ATTCTGGACAAAATATGTCA+GGG | - | chr1_3:75862679-75862698 | Msa0141110:intron | 30.0% | |
| ! | GAATATAACACGAGAACTTT+TGG | + | chr1_3:75863065-75863084 | None:intergenic | 30.0% |
| ACTGTAAAATCACTACAACT+AGG | + | chr1_3:75863137-75863156 | None:intergenic | 30.0% | |
| ! | TCTGATTATACTTTGAAGGT+GGG | + | chr1_3:75863569-75863588 | None:intergenic | 30.0% |
| TGTCTCTGATTATACTTTGA+AGG | + | chr1_3:75863573-75863592 | None:intergenic | 30.0% | |
| ATATGACCTATTATTGGGTT+TGG | + | chr1_3:75863781-75863800 | None:intergenic | 30.0% | |
| CAACATAAGCAACAAGAAAA+GGG | + | chr1_3:75863815-75863834 | None:intergenic | 30.0% | |
| ATGTGAACTAAATACACACA+TGG | + | chr1_3:75863920-75863939 | None:intergenic | 30.0% | |
| TGCATATACCCATATGTATA+TGG | - | chr1_3:75863961-75863980 | Msa0141110:five_prime_UTR | 30.0% | |
| TTAAGCATGCATGTTATCAG+TGG | - | chr1_3:75858095-75858114 | Msa0141110:CDS | 35.0% | |
| TTGATTCATTGGAGACGATA+TGG | - | chr1_3:75858164-75858183 | Msa0141110:CDS | 35.0% | |
| ATATCATTAACATGGACCCT+AGG | - | chr1_3:75858271-75858290 | Msa0141110:CDS | 35.0% | |
| !! | CTTTGAAGCTTGCTATGTTA+TGG | - | chr1_3:75858469-75858488 | Msa0141110:CDS | 35.0% |
| AGAATTTCAACAAAACCCGT+AGG | + | chr1_3:75858591-75858610 | None:intergenic | 35.0% | |
| TGGAGAACAATCCAATAGTT+AGG | - | chr1_3:75858735-75858754 | Msa0141110:CDS | 35.0% | |
| AAAGGTCCAACCAATTAAGA+AGG | - | chr1_3:75858774-75858793 | Msa0141110:CDS | 35.0% | |
| ACTTTCAAGGCCTTCTTAAT+TGG | + | chr1_3:75858787-75858806 | None:intergenic | 35.0% | |
| TTTATGAAAATAGGAGGGCT+AGG | - | chr1_3:75859054-75859073 | Msa0141110:intron | 35.0% | |
| !! | GAAGATAATTAAGAAGCGCT+TGG | - | chr1_3:75859251-75859270 | Msa0141110:intron | 35.0% |
| GAATTTGGAAATATTCGTGC+AGG | - | chr1_3:75859625-75859644 | Msa0141110:intron | 35.0% | |
| ! | AAATATGAAGTGTCCATGTC+AGG | + | chr1_3:75859673-75859692 | None:intergenic | 35.0% |
| GAGACCCTTACTAAAAATTG+CGG | - | chr1_3:75859706-75859725 | Msa0141110:intron | 35.0% | |
| GCGTGATATATTACACGAAA+TGG | - | chr1_3:75859756-75859775 | Msa0141110:intron | 35.0% | |
| TGGTTAAGATAGTGAAGAAG+CGG | - | chr1_3:75859776-75859795 | Msa0141110:intron | 35.0% | |
| ! | ATTTAGTTGCAGAAAGGCAT+TGG | + | chr1_3:75859839-75859858 | None:intergenic | 35.0% |
| ! | TATATGCTGCATAGTATTGG+GGG | + | chr1_3:75859999-75860018 | None:intergenic | 35.0% |
| TACAAAAATCTGCTTCAGAC+TGG | + | chr1_3:75860187-75860206 | None:intergenic | 35.0% | |
| !! | CTATTTTGTGTTTGAGGTGA+AGG | + | chr1_3:75860369-75860388 | None:intergenic | 35.0% |
| ! | ACACTATTTTCTTCTCTTGG+TGG | + | chr1_3:75860466-75860485 | None:intergenic | 35.0% |
| TTAACAATCGGTTGAGTTTG+AGG | + | chr1_3:75860505-75860524 | None:intergenic | 35.0% | |
| TCTGCAGCAGAATTAACAAT+CGG | + | chr1_3:75860517-75860536 | None:intergenic | 35.0% | |
| !! | ATTTGATGATGCTGCTATTC+AGG | - | chr1_3:75860537-75860556 | Msa0141110:intron | 35.0% |
| CATGTGCAATGACATGTAAA+TGG | + | chr1_3:75860816-75860835 | None:intergenic | 35.0% | |
| ACTATGGAGGAAATGAAACA+TGG | + | chr1_3:75861167-75861186 | None:intergenic | 35.0% | |
| TAGACAGGAGAAATATCGAA+AGG | + | chr1_3:75861202-75861221 | None:intergenic | 35.0% | |
| TCTCCTGTCTAATAGTAGAA+TGG | - | chr1_3:75861211-75861230 | Msa0141110:CDS | 35.0% | |
| TTAATTCCTTAGGCATGTGA+TGG | - | chr1_3:75861296-75861315 | Msa0141110:intron | 35.0% | |
| GATTCATGTGTTGAACAGTA+AGG | - | chr1_3:75861350-75861369 | Msa0141110:intron | 35.0% | |
| !! | TAAGGTGGACTAATAACAAG+GGG | + | chr1_3:75861451-75861470 | None:intergenic | 35.0% |
| !! | CTTAAGGTGGACTAATAACA+AGG | + | chr1_3:75861453-75861472 | None:intergenic | 35.0% |
| !! | CTTGTTATTAGTCCACCTTA+AGG | - | chr1_3:75861451-75861470 | Msa0141110:intron | 35.0% |
| GACGAGTACAAAAAACAAAC+TGG | + | chr1_3:75861543-75861562 | None:intergenic | 35.0% | |
| AAACGAATAACTTCGACAGA+AGG | + | chr1_3:75861568-75861587 | None:intergenic | 35.0% | |
| TGAAAAGATGATATCACCTC+GGG | + | chr1_3:75861734-75861753 | None:intergenic | 35.0% | |
| TGTTGTGCATTATGGAATTC+TGG | - | chr1_3:75861879-75861898 | Msa0141110:intron | 35.0% | |
| !!! | TCATGCCTTTTTTTCTATGC+TGG | - | chr1_3:75861985-75862004 | Msa0141110:CDS | 35.0% |
| ! | TCTGCTGAAATGTGTCTTTT+TGG | - | chr1_3:75862009-75862028 | Msa0141110:CDS | 35.0% |
| TCAGAATATGTTTGGACAGA+GGG | - | chr1_3:75862098-75862117 | Msa0141110:intron | 35.0% | |
| !! | TTAGGAGTTGGATTTTAGAG+AGG | + | chr1_3:75862285-75862304 | None:intergenic | 35.0% |
| ! | CACTTACTAAGGGTATGTTT+AGG | + | chr1_3:75862303-75862322 | None:intergenic | 35.0% |
| AACATACCCTTAGTAAGTGA+AGG | - | chr1_3:75862304-75862323 | Msa0141110:intron | 35.0% | |
| ACATACCCTTAGTAAGTGAA+GGG | - | chr1_3:75862305-75862324 | Msa0141110:intron | 35.0% | |
| GCAACTCAATTAACCATTAC+TGG | + | chr1_3:75862834-75862853 | None:intergenic | 35.0% | |
| !!! | GTTGCTTTATTTTAGGGATG+AGG | - | chr1_3:75862849-75862868 | Msa0141110:intron | 35.0% |
| TCGCAATATTGTCATGTTGA+AGG | + | chr1_3:75862924-75862943 | None:intergenic | 35.0% | |
| CAACATGACAATATTGCGAA+AGG | - | chr1_3:75862925-75862944 | Msa0141110:intron | 35.0% | |
| TCATGGTTTACATGTACAAG+TGG | + | chr1_3:75862994-75863013 | None:intergenic | 35.0% | |
| ! | GATGAGTCAGAAGATGATTT+TGG | - | chr1_3:75863018-75863037 | Msa0141110:intron | 35.0% |
| !! | ATTTTGGTCAATTAGCCCAT+AGG | - | chr1_3:75863034-75863053 | Msa0141110:intron | 35.0% |
| TTCATCTTGCTCTTTCTTCT+TGG | - | chr1_3:75863108-75863127 | Msa0141110:intron | 35.0% | |
| GAGATACTCATACACAGATT+CGG | - | chr1_3:75863196-75863215 | Msa0141110:intron | 35.0% | |
| !!! | AGTTGGTTCTGAGTTTTCAA+GGG | + | chr1_3:75863343-75863362 | None:intergenic | 35.0% |
| !!! | AAGTTGGTTCTGAGTTTTCA+AGG | + | chr1_3:75863344-75863363 | None:intergenic | 35.0% |
| !! | TCTGCTATAAATTGGTGATG+AGG | + | chr1_3:75863454-75863473 | None:intergenic | 35.0% |
| ATAGGCTGTCTGCTATAAAT+TGG | + | chr1_3:75863462-75863481 | None:intergenic | 35.0% | |
| ! | TGATTATACTTTGAAGGTGG+GGG | + | chr1_3:75863567-75863586 | None:intergenic | 35.0% |
| ! | CTGATTATACTTTGAAGGTG+GGG | + | chr1_3:75863568-75863587 | None:intergenic | 35.0% |
| ! | CTCTGATTATACTTTGAAGG+TGG | + | chr1_3:75863570-75863589 | None:intergenic | 35.0% |
| !!! | CAACAGTTTTTTGAGCAACA+AGG | - | chr1_3:75863591-75863610 | Msa0141110:intron | 35.0% |
| GGTTCATCTCATTCAAGTAA+TGG | - | chr1_3:75863612-75863631 | Msa0141110:intron | 35.0% | |
| !! | ATCTTCTGGTTTCTGTTCTT+TGG | + | chr1_3:75863706-75863725 | None:intergenic | 35.0% |
| CCAACATAAGCAACAAGAAA+AGG | + | chr1_3:75863816-75863835 | None:intergenic | 35.0% | |
| !! | CCTTTTCTTGTTGCTTATGT+TGG | - | chr1_3:75863813-75863832 | Msa0141110:intron | 35.0% |
| !! | TGTTCATTTGGTTTAGCTTG+AGG | - | chr1_3:75863853-75863872 | Msa0141110:intron | 35.0% |
| ! | TCCATTTTGTGGTTGTGTTT+AGG | - | chr1_3:75863878-75863897 | Msa0141110:five_prime_UTR | 35.0% |
| TCCTAAACACAACCACAAAA+TGG | + | chr1_3:75863882-75863901 | None:intergenic | 35.0% | |
| CACTAACGCATAAAAGAGAT+GGG | + | chr1_3:75864025-75864044 | None:intergenic | 35.0% | |
| ACACTAACGCATAAAAGAGA+TGG | + | chr1_3:75864026-75864045 | None:intergenic | 35.0% | |
| GTCGGTCCTCAAAATCTTAA+AGG | - | chr1_3:75857725-75857744 | Msa0141110:three_prime_UTR | 40.0% | |
| ATTTGCTCATTGGTCCTGAT+TGG | - | chr1_3:75858226-75858245 | Msa0141110:CDS | 40.0% | |
| TTTGCTCATTGGTCCTGATT+GGG | - | chr1_3:75858227-75858246 | Msa0141110:CDS | 40.0% | |
| !! | TCAATGTTGATAGCCCAATC+AGG | + | chr1_3:75858243-75858262 | None:intergenic | 40.0% |
| ! | GTAATCACATGTTTCGGTGT+AGG | - | chr1_3:75858352-75858371 | Msa0141110:CDS | 40.0% |
| CAATCCAATAGTTAGGCAGA+AGG | - | chr1_3:75858742-75858761 | Msa0141110:CDS | 40.0% | |
| ATCTCCTTCTGCCTAACTAT+TGG | + | chr1_3:75858749-75858768 | None:intergenic | 40.0% | |
| TCAAGGCCTTCTTAATTGGT+TGG | + | chr1_3:75858783-75858802 | None:intergenic | 40.0% | |
| ATGTAGACCACGTACTTTCA+AGG | + | chr1_3:75858800-75858819 | None:intergenic | 40.0% | |
| TGTCTCTTGAATGCCAATAC+AGG | - | chr1_3:75858927-75858946 | Msa0141110:intron | 40.0% | |
| GTCTCTTGAATGCCAATACA+GGG | - | chr1_3:75858928-75858947 | Msa0141110:intron | 40.0% | |
| TCTACTGCTGACATGACTAT+TGG | + | chr1_3:75858954-75858973 | None:intergenic | 40.0% | |
| TTTGGAAATATTCGTGCAGG+AGG | - | chr1_3:75859628-75859647 | Msa0141110:intron | 40.0% | |
| GGTTAAGATAGTGAAGAAGC+GGG | - | chr1_3:75859777-75859796 | Msa0141110:intron | 40.0% | |
| ! | TTTTCCCTCACACTTAAGTC+CGG | + | chr1_3:75859919-75859938 | None:intergenic | 40.0% |
| ! | TTTTTGAATTAACAGGCCGC+TGG | - | chr1_3:75860430-75860449 | Msa0141110:intron | 40.0% |
| ! | GGCACACTATTTTCTTCTCT+TGG | + | chr1_3:75860469-75860488 | None:intergenic | 40.0% |
| !! | TGTTTGTTGTGTAGGGCTAA+TGG | - | chr1_3:75860628-75860647 | Msa0141110:intron | 40.0% |
| TGCATGGCCAAAAATCACAA+TGG | - | chr1_3:75860759-75860778 | Msa0141110:intron | 40.0% | |
| GCATGGCCAAAAATCACAAT+GGG | - | chr1_3:75860760-75860779 | Msa0141110:intron | 40.0% | |
| ! | CGGATTCCCATTGTGATTTT+TGG | + | chr1_3:75860769-75860788 | None:intergenic | 40.0% |
| ATGGGAATCCGATCAATTGT+TGG | - | chr1_3:75860778-75860797 | Msa0141110:intron | 40.0% | |
| AAGGCAGACACTCATAACTA+TGG | + | chr1_3:75861183-75861202 | None:intergenic | 40.0% | |
| !! | GTTGAACAGTAAGGGTGTTT+AGG | - | chr1_3:75861359-75861378 | Msa0141110:intron | 40.0% |
| TTCCACATGGGGTAATCTTA+AGG | - | chr1_3:75861382-75861401 | Msa0141110:intron | 40.0% | |
| TCCACATGGGGTAATCTTAA+GGG | - | chr1_3:75861383-75861402 | Msa0141110:intron | 40.0% | |
| TTAAGGGTTCATCCCTCATA+TGG | - | chr1_3:75861399-75861418 | Msa0141110:intron | 40.0% | |
| TAAGGGTTCATCCCTCATAT+GGG | - | chr1_3:75861400-75861419 | Msa0141110:intron | 40.0% | |
| GAGAGATAAAGTAAAGCTGG+TGG | + | chr1_3:75861602-75861621 | None:intergenic | 40.0% | |
| GAGGAGAGATAAAGTAAAGC+TGG | + | chr1_3:75861605-75861624 | None:intergenic | 40.0% | |
| GATTAAAAATGCTCAAGGGC+TGG | - | chr1_3:75861664-75861683 | Msa0141110:intron | 40.0% | |
| GAAAAGATGATATCACCTCG+GGG | + | chr1_3:75861733-75861752 | None:intergenic | 40.0% | |
| AGTCGATGTGTTGTGCATTA+TGG | - | chr1_3:75861871-75861890 | Msa0141110:intron | 40.0% | |
| CATTATGGAATTCTGGACCT+GGG | - | chr1_3:75861886-75861905 | Msa0141110:intron | 40.0% | |
| GCTAAAATGGGATAAATCCC+AGG | + | chr1_3:75861906-75861925 | None:intergenic | 40.0% | |
| CAGAGCCAGCATAGAAAAAA+AGG | + | chr1_3:75861993-75862012 | None:intergenic | 40.0% | |
| GTCAGAATATGTTTGGACAG+AGG | - | chr1_3:75862097-75862116 | Msa0141110:intron | 40.0% | |
| CAGAATATGTTTGGACAGAG+GGG | - | chr1_3:75862099-75862118 | Msa0141110:intron | 40.0% | |
| ! | TCGGAGGGAAGTCTATATTT+TGG | + | chr1_3:75862256-75862275 | None:intergenic | 40.0% |
| !! | GAGTTGGATTTTAGAGAGGA+CGG | + | chr1_3:75862281-75862300 | None:intergenic | 40.0% |
| ! | CTAAGGGTATGTTTAGGAGT+TGG | + | chr1_3:75862297-75862316 | None:intergenic | 40.0% |
| CATACCCTTAGTAAGTGAAG+GGG | - | chr1_3:75862306-75862325 | Msa0141110:intron | 40.0% | |
| CTAACCCCTTCACTTACTAA+GGG | + | chr1_3:75862313-75862332 | None:intergenic | 40.0% | |
| AGGAGGTGAGGTCTATTATT+AGG | - | chr1_3:75862331-75862350 | Msa0141110:intron | 40.0% | |
| TGACTCAGAATTGTTAGGAG+AGG | - | chr1_3:75862384-75862403 | Msa0141110:intron | 40.0% | |
| CTCTATCAAGATTCGAGAGT+GGG | + | chr1_3:75862413-75862432 | None:intergenic | 40.0% | |
| ACTCTATCAAGATTCGAGAG+TGG | + | chr1_3:75862414-75862433 | None:intergenic | 40.0% | |
| CTTGATAGAGTTGCACACAA+AGG | - | chr1_3:75862423-75862442 | Msa0141110:intron | 40.0% | |
| ATCTTTCCCTTAATGCCTGT+TGG | - | chr1_3:75862474-75862493 | Msa0141110:CDS | 40.0% | |
| CTAGAAACTCCTTCATGTGT+AGG | + | chr1_3:75862502-75862521 | None:intergenic | 40.0% | |
| AAACGTTCCTTGCAAAATGC+AGG | - | chr1_3:75862571-75862590 | Msa0141110:intron | 40.0% | |
| ! | TCTTAGTCCTGCATTTTGCA+AGG | + | chr1_3:75862581-75862600 | None:intergenic | 40.0% |
| !!! | TTAGAGCGACAGTTTTGAAC+TGG | + | chr1_3:75862643-75862662 | None:intergenic | 40.0% |
| !! | TGACACGTTTCTGGTAAGAA+CGG | + | chr1_3:75862744-75862763 | None:intergenic | 40.0% |
| ! | TTTAGGGATGAGGAGCTTTT+AGG | - | chr1_3:75862859-75862878 | Msa0141110:intron | 40.0% |
| CTTCTGACTCATCATCTTCA+TGG | + | chr1_3:75863011-75863030 | None:intergenic | 40.0% | |
| !!! | GAACTTTTGGGTTCACCTAT+GGG | + | chr1_3:75863052-75863071 | None:intergenic | 40.0% |
| !!! | AGAACTTTTGGGTTCACCTA+TGG | + | chr1_3:75863053-75863072 | None:intergenic | 40.0% |
| ! | TCTTAGTGGTGATGCATACA+AGG | - | chr1_3:75863308-75863327 | Msa0141110:intron | 40.0% |
| ! | TGAAGACTCTCTAGGAATAG+CGG | + | chr1_3:75863409-75863428 | None:intergenic | 40.0% |
| !! | AATTGGTGATGAGGTAGTAG+TGG | + | chr1_3:75863445-75863464 | None:intergenic | 40.0% |
| GGAGATGGCTCATCATATAT+AGG | + | chr1_3:75863480-75863499 | None:intergenic | 40.0% | |
| TGGTTTCTGTTCTTTGGTTG+GGG | + | chr1_3:75863700-75863719 | None:intergenic | 40.0% | |
| CTGGTTTCTGTTCTTTGGTT+GGG | + | chr1_3:75863701-75863720 | None:intergenic | 40.0% | |
| ! | TCTGGTTTCTGTTCTTTGGT+TGG | + | chr1_3:75863702-75863721 | None:intergenic | 40.0% |
| !! | TCTTTGAAAAGGGCATCTTC+TGG | + | chr1_3:75863720-75863739 | None:intergenic | 40.0% |
| CATCCTCCAAACCCAATAAT+AGG | - | chr1_3:75863772-75863791 | Msa0141110:intron | 40.0% | |
| TGACCTATTATTGGGTTTGG+AGG | + | chr1_3:75863778-75863797 | None:intergenic | 40.0% | |
| !! | GGTTGTGTTTAGGAAGCATT+CGG | - | chr1_3:75863888-75863907 | Msa0141110:five_prime_UTR | 40.0% |
| ATCTGGTTGCAAACAGAGAA+TGG | - | chr1_3:75864058-75864077 | Msa0141110:five_prime_UTR | 40.0% | |
| AGAAGGGAACGAAGATGAGA+GGG | + | chr1_3:75857893-75857912 | None:intergenic | 45.0% | |
| TAGAAGGGAACGAAGATGAG+AGG | + | chr1_3:75857894-75857913 | None:intergenic | 45.0% | |
| !! | GCAACCAGTGATTTGCTCAT+TGG | - | chr1_3:75858216-75858235 | Msa0141110:CDS | 45.0% |
| AGGACCAATGAGCAAATCAC+TGG | + | chr1_3:75858223-75858242 | None:intergenic | 45.0% | |
| CCTCTTATCAAAGCCATGTC+TGG | + | chr1_3:75858381-75858400 | None:intergenic | 45.0% | |
| !! | CCAGACATGGCTTTGATAAG+AGG | - | chr1_3:75858378-75858397 | Msa0141110:CDS | 45.0% |
| ATTCTTGAAAAGGGGGTCGA+TGG | - | chr1_3:75858606-75858625 | Msa0141110:intron | 45.0% | |
| TTCTTGAAAAGGGGGTCGAT+GGG | - | chr1_3:75858607-75858626 | Msa0141110:intron | 45.0% | |
| TGGACATGTGTGGAGAAGAT+AGG | - | chr1_3:75858682-75858701 | Msa0141110:intron | 45.0% | |
| CATGTGTGGAGAAGATAGGT+CGG | - | chr1_3:75858686-75858705 | Msa0141110:intron | 45.0% | |
| ATTAAGGAGGGTAGGTCATG+TGG | - | chr1_3:75858715-75858734 | Msa0141110:CDS | 45.0% | |
| GGCAGAAGGAGATTGAGAAA+AGG | - | chr1_3:75858756-75858775 | Msa0141110:CDS | 45.0% | |
| ! | AAGAAGGCCTTGAAAGTACG+TGG | - | chr1_3:75858790-75858809 | Msa0141110:CDS | 45.0% |
| ATGTAGCTAACTCTGCCTGT+TGG | - | chr1_3:75858863-75858882 | Msa0141110:intron | 45.0% | |
| CATGACTATTGGCCCTGTAT+TGG | + | chr1_3:75858943-75858962 | None:intergenic | 45.0% | |
| AGTCATGTCAGCAGTAGATG+AGG | - | chr1_3:75858956-75858975 | Msa0141110:intron | 45.0% | |
| ! | AGAGACAGCAGCTGTGTTTT+GGG | + | chr1_3:75859288-75859307 | None:intergenic | 45.0% |
| ! | AAGAGACAGCAGCTGTGTTT+TGG | + | chr1_3:75859289-75859308 | None:intergenic | 45.0% |
| ! | GATGCATGGCAAGAAGCTTT+TGG | - | chr1_3:75859955-75859974 | Msa0141110:intron | 45.0% |
| TGGTGGAAATTCAACTCCAG+CGG | + | chr1_3:75860449-75860468 | None:intergenic | 45.0% | |
| ! | GTTTGAGGAGGTGTGAAGAA+TGG | + | chr1_3:75860490-75860509 | None:intergenic | 45.0% |
| ACAATCGGTTGAGTTTGAGG+AGG | + | chr1_3:75860502-75860521 | None:intergenic | 45.0% | |
| !! | GTACAAAGAGCACCTAAGGT+CGG | + | chr1_3:75860584-75860603 | None:intergenic | 45.0% |
| !! | TGGAGTACAAAGAGCACCTA+AGG | + | chr1_3:75860588-75860607 | None:intergenic | 45.0% |
| CATGTAGGTTGTAACCGCTA+TGG | + | chr1_3:75860919-75860938 | None:intergenic | 45.0% | |
| GCAGACACTCATAACTATGG+AGG | + | chr1_3:75861180-75861199 | None:intergenic | 45.0% | |
| ATTCCTTAGGCATGTGATGG+TGG | - | chr1_3:75861299-75861318 | Msa0141110:intron | 45.0% | |
| TAACCACCATCACATGCCTA+AGG | + | chr1_3:75861305-75861324 | None:intergenic | 45.0% | |
| !! | AAGGGTGTTTAGGTTCCACA+TGG | - | chr1_3:75861369-75861388 | Msa0141110:intron | 45.0% |
| ! | AGGGTGTTTAGGTTCCACAT+GGG | - | chr1_3:75861370-75861389 | Msa0141110:intron | 45.0% |
| ACCCTTAAGATTACCCCATG+TGG | + | chr1_3:75861387-75861406 | None:intergenic | 45.0% | |
| AATGCACCATGCCCATATGA+GGG | + | chr1_3:75861414-75861433 | None:intergenic | 45.0% | |
| AAATGCACCATGCCCATATG+AGG | + | chr1_3:75861415-75861434 | None:intergenic | 45.0% | |
| AGACAACATTAGCTAGCGCA+AGG | + | chr1_3:75861506-75861525 | None:intergenic | 45.0% | |
| GCATTATGGAATTCTGGACC+TGG | - | chr1_3:75861885-75861904 | Msa0141110:intron | 45.0% | |
| ! | TAAGCTGGTTGGTGTGAGAT+TGG | - | chr1_3:75861936-75861955 | Msa0141110:intron | 45.0% |
| AATATGTTTGGACAGAGGGG+AGG | - | chr1_3:75862102-75862121 | Msa0141110:intron | 45.0% | |
| !! | GATTTTAGAGAGGACGGCTT+CGG | + | chr1_3:75862275-75862294 | None:intergenic | 45.0% |
| CCTAACCCCTTCACTTACTA+AGG | + | chr1_3:75862314-75862333 | None:intergenic | 45.0% | |
| CCTTAGTAAGTGAAGGGGTT+AGG | - | chr1_3:75862311-75862330 | Msa0141110:intron | 45.0% | |
| TAGTAAGTGAAGGGGTTAGG+AGG | - | chr1_3:75862314-75862333 | Msa0141110:intron | 45.0% | |
| GTGCGTGACTCAGAATTGTT+AGG | - | chr1_3:75862379-75862398 | Msa0141110:intron | 45.0% | |
| TAGGAGCCAACAGGCATTAA+GGG | + | chr1_3:75862483-75862502 | None:intergenic | 45.0% | |
| CAAAATATGTCAGGGCGTGA+AGG | - | chr1_3:75862687-75862706 | Msa0141110:intron | 45.0% | |
| ! | CAAGAAGCATGACACGTTTC+TGG | + | chr1_3:75862753-75862772 | None:intergenic | 45.0% |
| !! | GATGAGGAGCTTTTAGGTCT+GGG | - | chr1_3:75862865-75862884 | Msa0141110:intron | 45.0% |
| GCGAAAGGAACTGCTAATTC+AGG | - | chr1_3:75862940-75862959 | Msa0141110:intron | 45.0% | |
| ACATGTACAAGTGGCAGAAC+TGG | + | chr1_3:75862985-75863004 | None:intergenic | 45.0% | |
| TAGACTGGCATCTTTGATGC+TGG | + | chr1_3:75863264-75863283 | None:intergenic | 45.0% | |
| TCAAAGATGCCAGTCTACTC+TGG | - | chr1_3:75863267-75863286 | Msa0141110:intron | 45.0% | |
| AGTCTACTCTGGTACTAGCA+CGG | - | chr1_3:75863278-75863297 | Msa0141110:intron | 45.0% | |
| AGCACGGTTGACTATCTTAG+TGG | - | chr1_3:75863294-75863313 | Msa0141110:intron | 45.0% | |
| AGAGGAGCTGCAAATGAAGT+TGG | + | chr1_3:75863360-75863379 | None:intergenic | 45.0% | |
| GGATTAGGGCTAGAATGAAG+AGG | + | chr1_3:75863378-75863397 | None:intergenic | 45.0% | |
| ! | TCTGAAGTCTTCATGGGAGA+TGG | + | chr1_3:75863495-75863514 | None:intergenic | 45.0% |
| !! | AGCGGTTCTGAAGTCTTCAT+GGG | + | chr1_3:75863501-75863520 | None:intergenic | 45.0% |
| ! | TTATACTTTGAAGGTGGGGG+TGG | + | chr1_3:75863564-75863583 | None:intergenic | 45.0% |
| TTTCTGTTCTTTGGTTGGGG+TGG | + | chr1_3:75863697-75863716 | None:intergenic | 45.0% | |
| !!! | ATATTTCTTTTTTAAATTAA+AGG | - | chr1_3:75862129-75862148 | Msa0141110:intron | 5.0% |
| TACTATACCACCATGTGCCC+AGG | - | chr1_3:75858564-75858583 | Msa0141110:intron | 50.0% | |
| CAACAAAACCCGTAGGACCT+GGG | + | chr1_3:75858584-75858603 | None:intergenic | 50.0% | |
| TCAACAAAACCCGTAGGACC+TGG | + | chr1_3:75858585-75858604 | None:intergenic | 50.0% | |
| GATAGGTCGGAGTGCGATTA+AGG | - | chr1_3:75858699-75858718 | Msa0141110:CDS | 50.0% | |
| TCAGCCGGACTTAAGTGTGA+GGG | - | chr1_3:75859912-75859931 | Msa0141110:intron | 50.0% | |
| ! | GCATGGCAAGAAGCTTTTGG+AGG | - | chr1_3:75859958-75859977 | Msa0141110:intron | 50.0% |
| ATTGGGGGAAAACTCCGCTT+GGG | + | chr1_3:75859984-75860003 | None:intergenic | 50.0% | |
| TATTGGGGGAAAACTCCGCT+TGG | + | chr1_3:75859985-75860004 | None:intergenic | 50.0% | |
| ATGATGACCACAGGCTAAGC+TGG | + | chr1_3:75860237-75860256 | None:intergenic | 50.0% | |
| AGTCAGATGCATCCGACCTT+AGG | - | chr1_3:75860569-75860588 | Msa0141110:intron | 50.0% | |
| ! | GGGTGTTTAGGTTCCACATG+GGG | - | chr1_3:75861371-75861390 | Msa0141110:intron | 50.0% |
| GTTCATCCCTCATATGGGCA+TGG | - | chr1_3:75861405-75861424 | Msa0141110:intron | 50.0% | |
| TGCGAAATGCACCCTTAAGG+TGG | + | chr1_3:75861466-75861485 | None:intergenic | 50.0% | |
| ! | CCTTAAGGGTGCATTTCGCA+CGG | - | chr1_3:75861466-75861485 | Msa0141110:intron | 50.0% |
| ! | CTTAAGGGTGCATTTCGCAC+GGG | - | chr1_3:75861467-75861486 | Msa0141110:intron | 50.0% |
| ! | TTAAGGGTGCATTTCGCACG+GGG | - | chr1_3:75861468-75861487 | Msa0141110:intron | 50.0% |
| ! | TGCATTTCGCACGGGGTTTT+TGG | - | chr1_3:75861475-75861494 | Msa0141110:intron | 50.0% |
| !!! | AGGGCTGGCTGATGTTTTGA+CGG | - | chr1_3:75861679-75861698 | Msa0141110:intron | 50.0% |
| TTTGAATCCGAAAGACCCCG+AGG | - | chr1_3:75861715-75861734 | Msa0141110:CDS | 50.0% | |
| GATATCACCTCGGGGTCTTT+CGG | + | chr1_3:75861725-75861744 | None:intergenic | 50.0% | |
| GTAGGAGCCAACAGGCATTA+AGG | + | chr1_3:75862484-75862503 | None:intergenic | 50.0% | |
| CTTCATGTGTAGGAGCCAAC+AGG | + | chr1_3:75862492-75862511 | None:intergenic | 50.0% | |
| !! | CTGTTGGCTCCTACACATGA+AGG | - | chr1_3:75862490-75862509 | Msa0141110:CDS | 50.0% |
| AATATGTCAGGGCGTGAAGG+AGG | - | chr1_3:75862690-75862709 | Msa0141110:intron | 50.0% | |
| !! | GTTTCTGGTAAGAACGGCAC+TGG | + | chr1_3:75862738-75862757 | None:intergenic | 50.0% |
| !! | GGATGAGGAGCTTTTAGGTC+TGG | - | chr1_3:75862864-75862883 | Msa0141110:intron | 50.0% |
| !! | GGAGCTTTTAGGTCTGGGAT+TGG | - | chr1_3:75862870-75862889 | Msa0141110:intron | 50.0% |
| !! | GTTGAAGGAGTACTCGCTGA+AGG | + | chr1_3:75862909-75862928 | None:intergenic | 50.0% |
| TTCGGAAACCAGAGTCAGTG+AGG | - | chr1_3:75863214-75863233 | Msa0141110:intron | 50.0% | |
| !! | GAGTTCATCCTCACTGACTC+TGG | + | chr1_3:75863225-75863244 | None:intergenic | 50.0% |
| !! | ATCTTTGATGCTGGTGGTGG+GGG | + | chr1_3:75863255-75863274 | None:intergenic | 50.0% |
| ! | CATCTTTGATGCTGGTGGTG+GGG | + | chr1_3:75863256-75863275 | None:intergenic | 50.0% |
| GCATCTTTGATGCTGGTGGT+GGG | + | chr1_3:75863257-75863276 | None:intergenic | 50.0% | |
| ACTGGCATCTTTGATGCTGG+TGG | + | chr1_3:75863261-75863280 | None:intergenic | 50.0% | |
| GTGCTAGTACCAGAGTAGAC+TGG | + | chr1_3:75863279-75863298 | None:intergenic | 50.0% | |
| GGTGATGCATACAAGGCAGA+AGG | - | chr1_3:75863315-75863334 | Msa0141110:intron | 50.0% | |
| ! | TAGCGGATGAGGTGGGATTA+GGG | + | chr1_3:75863392-75863411 | None:intergenic | 50.0% |
| !! | ATAGCGGATGAGGTGGGATT+AGG | + | chr1_3:75863393-75863412 | None:intergenic | 50.0% |
| !! | CTAGGAATAGCGGATGAGGT+GGG | + | chr1_3:75863399-75863418 | None:intergenic | 50.0% |
| !! | TCTAGGAATAGCGGATGAGG+TGG | + | chr1_3:75863400-75863419 | None:intergenic | 50.0% |
| !! | CTCTCTAGGAATAGCGGATG+AGG | + | chr1_3:75863403-75863422 | None:intergenic | 50.0% |
| !! | GGATGGGTTGAAGACTCTCT+AGG | + | chr1_3:75863417-75863436 | None:intergenic | 50.0% |
| GGTAGTAGTGGCATGAGGAT+GGG | + | chr1_3:75863433-75863452 | None:intergenic | 50.0% | |
| AGGTAGTAGTGGCATGAGGA+TGG | + | chr1_3:75863434-75863453 | None:intergenic | 50.0% | |
| GATGAGGTAGTAGTGGCATG+AGG | + | chr1_3:75863438-75863457 | None:intergenic | 50.0% | |
| !! | CAGCGGTTCTGAAGTCTTCA+TGG | + | chr1_3:75863502-75863521 | None:intergenic | 50.0% |
| ACAGGAGCTTGTGTATCCCA+GGG | + | chr1_3:75863534-75863553 | None:intergenic | 50.0% | |
| TTCGTCTACTGACAGCTTGC+TGG | - | chr1_3:75863641-75863660 | Msa0141110:intron | 50.0% | |
| ! | TCGTCTACTGACAGCTTGCT+GGG | - | chr1_3:75863642-75863661 | Msa0141110:intron | 50.0% |
| !! | AGCTTGAGGCGTCCATTTTG+TGG | - | chr1_3:75863867-75863886 | Msa0141110:five_prime_UTR | 50.0% |
| TCGGTGTAGGACACCAGACA+TGG | - | chr1_3:75858365-75858384 | Msa0141110:CDS | 55.0% | |
| TGAAAAGGGGGTCGATGGGA+CGG | - | chr1_3:75858611-75858630 | Msa0141110:intron | 55.0% | |
| AGGTCGGAGTGCGATTAAGG+AGG | - | chr1_3:75858702-75858721 | Msa0141110:CDS | 55.0% | |
| GGTCGGAGTGCGATTAAGGA+GGG | - | chr1_3:75858703-75858722 | Msa0141110:CDS | 55.0% | |
| GGAGTGCGATTAAGGAGGGT+AGG | - | chr1_3:75858707-75858726 | Msa0141110:CDS | 55.0% | |
| CTCAGCCGGACTTAAGTGTG+AGG | - | chr1_3:75859911-75859930 | Msa0141110:intron | 55.0% | |
| !! | GAAGCTTTTGGAGGCCCAAG+CGG | - | chr1_3:75859967-75859986 | Msa0141110:intron | 55.0% |
| TCCATCACCAGCTTAGCCTG+TGG | - | chr1_3:75860227-75860246 | Msa0141110:intron | 55.0% | |
| ACCACAGGCTAAGCTGGTGA+TGG | + | chr1_3:75860231-75860250 | None:intergenic | 55.0% | |
| CCGTGCGAAATGCACCCTTA+AGG | + | chr1_3:75861469-75861488 | None:intergenic | 55.0% | |
| TTAGAGAGGACGGCTTCGGA+GGG | + | chr1_3:75862271-75862290 | None:intergenic | 55.0% | |
| TTTAGAGAGGACGGCTTCGG+AGG | + | chr1_3:75862272-75862291 | None:intergenic | 55.0% | |
| AGTGAAGGGGTTAGGAGGTG+AGG | - | chr1_3:75862319-75862338 | Msa0141110:intron | 55.0% | |
| GGCATCTTTGATGCTGGTGG+TGG | + | chr1_3:75863258-75863277 | None:intergenic | 55.0% | |
| GACAGGAGCTTGTGTATCCC+AGG | + | chr1_3:75863535-75863554 | None:intergenic | 55.0% | |
| CACCATGTGCCCAGGTCCTA+CGG | - | chr1_3:75858572-75858591 | Msa0141110:intron | 60.0% | |
| ACCATGTGCCCAGGTCCTAC+GGG | - | chr1_3:75858573-75858592 | Msa0141110:intron | 60.0% | |
| GAAAAGGGGGTCGATGGGAC+GGG | - | chr1_3:75858612-75858631 | Msa0141110:intron | 60.0% | |
| TGTGTATCCCAGGGAGCTGG+AGG | + | chr1_3:75863525-75863544 | None:intergenic | 60.0% | |
| GCTTGTGTATCCCAGGGAGC+TGG | + | chr1_3:75863528-75863547 | None:intergenic | 60.0% | |
| CGTAGGACCTGGGCACATGG+TGG | + | chr1_3:75858574-75858593 | None:intergenic | 65.0% | |
| ACCCGTAGGACCTGGGCACA+TGG | + | chr1_3:75858577-75858596 | None:intergenic | 65.0% | |
| GGTGGGGGTGGAATCACGAC+AGG | + | chr1_3:75863552-75863571 | None:intergenic | 65.0% | |
| AACCGCTGCCTCCAGCTCCC+TGG | - | chr1_3:75863514-75863533 | Msa0141110:CDS | 70.0% | |
| ACCGCTGCCTCCAGCTCCCT+GGG | - | chr1_3:75863515-75863534 | Msa0141110:CDS | 70.0% | |
| TCCCAGGGAGCTGGAGGCAG+CGG | + | chr1_3:75863519-75863538 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 75857656 | 75864087 | 75857656 | ID=Msa0141110;Name=Msa0141110 |
| chr1_3 | mRNA | 75857656 | 75864087 | 75857656 | ID=Msa0141110-mRNA-1;Parent=Msa0141110;Name=Msa0141110-mRNA-1;_AED=0.19;_eAED=0.19;_QI=255|1|1|1|0.88|0.8|10|284|507 |
| chr1_3 | exon | 75857656 | 75858555 | 75857656 | ID=Msa0141110-mRNA-1:exon:26494;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75858688 | 75858879 | 75858688 | ID=Msa0141110-mRNA-1:exon:26493;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75858958 | 75859043 | 75858958 | ID=Msa0141110-mRNA-1:exon:26492;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75860007 | 75860088 | 75860007 | ID=Msa0141110-mRNA-1:exon:26491;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75861153 | 75861298 | 75861153 | ID=Msa0141110-mRNA-1:exon:26490;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75861714 | 75861827 | 75861714 | ID=Msa0141110-mRNA-1:exon:26489;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75861945 | 75862043 | 75861945 | ID=Msa0141110-mRNA-1:exon:26488;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75862432 | 75862510 | 75862432 | ID=Msa0141110-mRNA-1:exon:26487;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75863451 | 75863593 | 75863451 | ID=Msa0141110-mRNA-1:exon:26486;Parent=Msa0141110-mRNA-1 |
| chr1_3 | exon | 75863866 | 75864087 | 75863866 | ID=Msa0141110-mRNA-1:exon:26485;Parent=Msa0141110-mRNA-1 |
| chr1_3 | five_prime_UTR | 75863866 | 75864087 | 75863866 | ID=Msa0141110-mRNA-1:five_prime_utr;Parent=Msa0141110-mRNA-1 |
| chr1_3 | five_prime_UTR | 75863561 | 75863593 | 75863561 | ID=Msa0141110-mRNA-1:five_prime_utr;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75863451 | 75863560 | 75863451 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75862432 | 75862510 | 75862432 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75861945 | 75862043 | 75861945 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75861714 | 75861827 | 75861714 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75861153 | 75861298 | 75861153 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75860007 | 75860088 | 75860007 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75858958 | 75859043 | 75858958 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75858688 | 75858879 | 75858688 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | CDS | 75857940 | 75858555 | 75857940 | ID=Msa0141110-mRNA-1:cds;Parent=Msa0141110-mRNA-1 |
| chr1_3 | three_prime_UTR | 75857656 | 75857939 | 75857656 | ID=Msa0141110-mRNA-1:three_prime_utr;Parent=Msa0141110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
