AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1135870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1135870 MtrunA17_Chr7g0217221 78.221 326 15 3 1 325 1 271 0.0 504
Msa1135870 MtrunA17_Chr6g0453211 66.564 326 80 8 1 314 1 309 3.56e-136 389
Msa1135870 MtrunA17_Chr3g0092401 53.823 327 110 9 1 315 2 299 1.20e-104 308
Msa1135870 MtrunA17_Chr4g0060721 51.471 340 121 11 1 315 2 322 2.78e-102 303
Msa1135870 MtrunA17_Chr7g0254411 43.909 353 122 8 1 307 1 323 9.34e-79 243
Msa1135870 MtrunA17_Chr6g0453471 50.732 205 87 5 1 191 1 205 8.59e-63 203
Msa1135870 MtrunA17_Chr4g0039971 71.552 116 33 0 1 116 2 117 1.26e-59 194
Msa1135870 MtrunA17_Chr7g0217741 70.339 118 35 0 1 118 1 118 1.71e-59 193
Msa1135870 MtrunA17_Chr3g0115821 69.828 116 35 0 1 116 1 116 1.96e-59 194
Msa1135870 MtrunA17_Chr2g0323411 67.227 119 39 0 1 119 1 119 1.85e-58 191
Msa1135870 MtrunA17_Chr1g0203411 64.844 128 44 1 1 128 1 127 3.51e-58 189
Msa1135870 MtrunA17_Chr4g0042671 70.339 118 35 0 1 118 1 118 3.27e-57 190
Msa1135870 MtrunA17_Chr1g0187761 63.281 128 47 0 1 128 1 128 8.78e-57 184
Msa1135870 MtrunA17_Chr7g0261281 62.903 124 46 0 1 124 1 124 5.50e-55 180
Msa1135870 MtrunA17_Chr7g0274581 59.350 123 50 0 1 123 1 123 6.85e-55 178
Msa1135870 MtrunA17_Chr8g0346561 63.333 120 44 0 1 120 1 120 1.03e-54 180
Msa1135870 MtrunA17_Chr5g0395281 65.254 118 41 0 1 118 1 118 1.73e-54 180
Msa1135870 MtrunA17_Chr1g0167661 66.379 116 39 0 1 116 1 116 1.85e-54 178
Msa1135870 MtrunA17_Chr5g0410961 65.254 118 41 0 1 118 1 118 2.49e-54 181
Msa1135870 MtrunA17_Chr2g0281071 66.387 119 39 1 1 118 1 119 2.77e-54 181
Msa1135870 MtrunA17_Chr1g0167691 66.379 116 39 0 1 116 1 116 2.80e-54 178
Msa1135870 MtrunA17_Chr7g0275911 62.500 120 45 0 1 120 1 120 4.82e-54 177
Msa1135870 MtrunA17_Chr4g0048511 64.706 119 41 1 1 118 1 119 8.47e-54 180
Msa1135870 MtrunA17_Chr4g0068061 64.655 116 41 0 1 116 1 116 4.60e-53 177
Msa1135870 MtrunA17_Chr3g0131121 65.517 116 40 0 1 116 1 116 7.75e-53 175
Msa1135870 MtrunA17_Chr8g0349261 67.797 118 36 2 1 116 1 118 1.07e-52 175
Msa1135870 MtrunA17_Chr3g0110351 67.797 118 38 0 1 118 1 118 1.25e-52 175
Msa1135870 MtrunA17_Chr5g0434571 67.797 118 38 0 1 118 37 154 2.80e-52 176
Msa1135870 MtrunA17_Chr6g0452271 63.559 118 43 0 1 118 1 118 3.16e-52 175
Msa1135870 MtrunA17_Chr4g0057031 67.797 118 38 0 1 118 1 118 4.91e-52 172
Msa1135870 MtrunA17_Chr1g0151941 64.957 117 40 1 1 116 1 117 6.20e-52 172
Msa1135870 MtrunA17_Chr4g0070611 62.602 123 46 0 1 123 1 123 7.58e-52 173
Msa1135870 MtrunA17_Chr4g0037141 62.931 116 43 0 1 116 1 116 1.04e-51 172
Msa1135870 MtrunA17_Chr4g0070641 62.602 123 46 0 1 123 1 123 1.23e-51 168
Msa1135870 MtrunA17_Chr3g0135311 67.521 117 37 1 1 116 1 117 2.61e-51 173
Msa1135870 MtrunA17_Chr3g0103281 62.069 116 44 0 1 116 1 116 4.52e-50 169
Msa1135870 MtrunA17_Chr1g0152011 64.957 117 40 1 1 116 1 117 5.89e-50 169
Msa1135870 MtrunA17_Chr5g0400821 63.636 121 43 1 1 120 1 121 1.08e-49 167
Msa1135870 MtrunA17_Chr8g0387421 62.712 118 44 0 1 118 1 118 1.12e-49 168
Msa1135870 MtrunA17_Chr7g0228891 64.957 117 41 0 1 117 1 117 1.18e-49 166
Msa1135870 MtrunA17_Chr2g0311221 63.636 110 40 0 2 111 4 113 2.02e-49 167
Msa1135870 MtrunA17_Chr7g0264641 63.248 117 42 1 1 116 1 117 4.44e-49 165
Msa1135870 MtrunA17_Chr4g0028311 61.983 121 45 1 1 120 1 121 5.21e-49 166
Msa1135870 MtrunA17_Chr5g0435101 61.207 116 45 0 3 118 2 117 6.22e-49 162
Msa1135870 MtrunA17_Chr8g0385321 59.483 116 47 0 1 116 1 116 1.53e-48 165
Msa1135870 MtrunA17_Chr4g0022931 57.480 127 53 1 1 126 1 127 3.53e-48 162
Msa1135870 MtrunA17_Chr3g0121241 61.607 112 43 0 5 116 35 146 1.76e-47 162
Msa1135870 MtrunA17_Chr1g0193371 59.664 119 48 0 1 119 1 119 6.22e-47 162
Msa1135870 MtrunA17_Chr1g0194951 60.345 116 46 0 1 116 1 116 6.65e-47 162
Msa1135870 MtrunA17_Chr2g0327351 63.063 111 40 1 1 110 1 111 1.56e-46 160
Msa1135870 MtrunA17_Chr2g0323351 57.851 121 51 0 1 121 1 121 1.73e-46 157
Msa1135870 MtrunA17_Chr4g0072751 64.865 111 38 1 1 110 1 111 1.80e-46 160
Msa1135870 MtrunA17_Chr4g0058631 60.169 118 47 0 1 118 1 118 3.29e-46 160
Msa1135870 MtrunA17_Chr2g0309911 60.360 111 44 0 6 116 5 115 4.99e-46 158
Msa1135870 MtrunA17_Chr4g0022901 59.483 116 46 1 1 115 1 116 7.26e-46 157
Msa1135870 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 7.87e-46 158
Msa1135870 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 9.56e-46 157
Msa1135870 MtrunA17_Chr3g0117091 50.303 165 73 2 1 156 1 165 1.78e-45 158
Msa1135870 MtrunA17_Chr7g0270891 57.627 118 50 0 1 118 1 118 3.05e-45 157
Msa1135870 MtrunA17_Chr1g0211161 52.000 150 65 1 3 145 4 153 6.17e-45 153
Msa1135870 MtrunA17_Chr2g0330041 58.621 116 48 0 1 116 1 116 6.39e-45 157
Msa1135870 MtrunA17_Chr8g0342541 56.897 116 50 0 1 116 1 116 6.45e-45 156
Msa1135870 MtrunA17_Chr6g0487491 53.237 139 56 2 1 130 1 139 8.45e-45 154
Msa1135870 MtrunA17_Chr1g0193801 55.932 118 52 0 1 118 1 118 1.20e-44 156
Msa1135870 MtrunA17_Chr8g0342521 56.897 116 50 0 1 116 1 116 2.49e-44 155
Msa1135870 MtrunA17_Chr4g0022911 57.759 116 48 1 1 115 1 116 3.63e-44 152
Msa1135870 MtrunA17_Chr4g0022881 57.018 114 49 0 1 114 1 114 6.87e-44 150
Msa1135870 MtrunA17_Chr7g0271241 62.385 109 41 0 1 109 1 109 3.07e-43 152
Msa1135870 MtrunA17_Chr5g0417821 57.547 106 45 0 11 116 6 111 1.08e-42 149
Msa1135870 MtrunA17_Chr7g0269831 59.483 116 47 0 1 116 1 116 1.75e-42 150
Msa1135870 MtrunA17_Chr4g0022891 57.522 113 48 0 1 113 1 113 3.61e-42 146
Msa1135870 MtrunA17_Chr8g0342481 56.410 117 50 1 1 116 1 117 4.75e-42 150
Msa1135870 MtrunA17_Chr4g0044421 51.908 131 63 0 1 131 1 131 5.50e-42 144
Msa1135870 MtrunA17_Chr1g0203441 58.879 107 44 0 13 119 14 120 6.52e-42 146
Msa1135870 MtrunA17_Chr7g0240821 51.449 138 60 1 17 147 6 143 1.02e-41 144
Msa1135870 MtrunA17_Chr8g0343831 60.909 110 43 0 12 121 8 117 2.00e-41 144
Msa1135870 MtrunA17_Chr3g0080861 59.434 106 43 0 12 117 37 142 2.20e-41 150
Msa1135870 MtrunA17_Chr4g0055981 60.748 107 42 0 9 115 52 158 4.61e-41 143
Msa1135870 MtrunA17_Chr3g0099131 57.009 107 46 0 12 118 41 147 7.15e-41 149
Msa1135870 MtrunA17_Chr5g0434911 57.273 110 47 0 7 116 16 125 9.10e-41 143
Msa1135870 MtrunA17_Chr7g0228231 53.043 115 54 0 12 126 14 128 9.43e-41 141
Msa1135870 MtrunA17_Chr5g0434931 59.434 106 43 0 11 116 34 139 1.58e-40 143
Msa1135870 MtrunA17_Chr2g0328771 58.491 106 44 0 12 117 20 125 3.07e-40 143
Msa1135870 MtrunA17_Chr4g0032401 59.434 106 43 0 12 117 17 122 5.54e-40 143
Msa1135870 MtrunA17_Chr1g0168661 57.143 112 48 0 6 117 15 126 5.97e-40 140
Msa1135870 MtrunA17_Chr8g0354661 58.491 106 44 0 12 117 37 142 6.89e-40 147
Msa1135870 MtrunA17_Chr1g0194291 57.407 108 46 0 11 118 20 127 1.65e-39 140
Msa1135870 MtrunA17_Chr3g0088461 57.273 110 47 0 8 117 18 127 2.53e-39 141
Msa1135870 MtrunA17_Chr6g0450101 50.833 120 57 1 1 118 1 120 5.66e-39 137
Msa1135870 MtrunA17_Chr4g0042611 68.182 88 28 0 1 88 1 88 6.10e-39 132
Msa1135870 MtrunA17_Chr6g0470971 56.250 112 49 0 9 120 11 122 6.47e-39 139
Msa1135870 MtrunA17_Chr1g0194301 51.261 119 58 0 8 126 29 147 7.94e-39 138
Msa1135870 MtrunA17_Chr7g0220341 57.143 112 46 1 11 120 24 135 8.28e-39 138
Msa1135870 MtrunA17_Chr1g0186061 58.095 105 44 0 13 117 21 125 9.93e-39 137
Msa1135870 MtrunA17_Chr5g0434831 56.075 107 47 0 10 116 5 111 2.08e-38 135
Msa1135870 MtrunA17_Chr1g0209661 33.218 289 144 9 12 274 27 292 3.23e-38 137
Msa1135870 MtrunA17_Chr7g0228991 58.491 106 44 0 11 116 28 133 8.44e-38 135
Msa1135870 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 9.24e-38 139
Msa1135870 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.44e-37 138
Msa1135870 MtrunA17_Chr2g0327821 50.435 115 57 0 9 123 3 117 1.60e-37 134
Msa1135870 MtrunA17_Chr5g0434841 56.604 106 46 0 11 116 19 124 1.80e-37 136
Msa1135870 MtrunA17_Chr8g0360111 57.843 102 43 0 11 112 24 125 1.42e-36 132
Msa1135870 MtrunA17_Chr8g0334881 51.852 108 51 1 8 114 6 113 4.08e-35 130
Msa1135870 MtrunA17_Chr7g0247131 75.676 74 18 0 44 117 10 83 5.64e-35 128
Msa1135870 MtrunA17_Chr2g0294811 58.696 92 38 0 1 92 1 92 6.26e-35 123
Msa1135870 MtrunA17_Chr4g0068921 48.739 119 61 0 8 126 20 138 5.32e-34 123
Msa1135870 MtrunA17_Chr2g0293911 51.351 111 54 0 8 118 20 130 1.65e-33 125
Msa1135870 MtrunA17_Chr5g0395221 60.714 84 33 0 5 88 5 88 3.24e-33 118
Msa1135870 MtrunA17_Chr1g0180391 48.624 109 56 0 12 120 19 127 8.78e-33 121
Msa1135870 MtrunA17_Chr2g0323321 51.429 105 50 1 1 105 1 104 2.60e-32 116
Msa1135870 MtrunA17_Chr4g0013361 49.038 104 52 1 12 114 10 113 7.75e-32 120
Msa1135870 MtrunA17_Chr8g0342531 44.828 116 59 1 1 111 1 116 1.56e-31 116
Msa1135870 MtrunA17_Chr3g0099141 52.809 89 42 0 8 96 36 124 2.15e-31 115
Msa1135870 MtrunA17_Chr5g0441131 48.598 107 54 1 12 117 9 115 2.44e-31 116
Msa1135870 MtrunA17_Chr8g0342511 55.172 87 39 0 1 87 1 87 2.77e-31 113
Msa1135870 MtrunA17_Chr4g0030881 48.246 114 52 1 9 115 4 117 5.11e-31 117
Msa1135870 MtrunA17_Chr1g0192411 47.273 110 58 0 8 117 8 117 1.78e-30 119
Msa1135870 MtrunA17_Chr5g0440781 42.336 137 72 3 12 145 12 144 1.76e-29 111
Msa1135870 MtrunA17_Chr5g0440761 42.647 136 71 3 13 145 13 144 4.73e-29 112
Msa1135870 MtrunA17_Chr5g0441141 42.336 137 72 3 12 145 12 144 5.06e-29 112
Msa1135870 MtrunA17_Chr4g0008551 41.007 139 73 2 14 144 38 175 5.67e-29 114
Msa1135870 MtrunA17_Chr8g0342461 52.222 90 42 1 1 89 1 90 1.12e-27 105
Msa1135870 MtrunA17_Chr8g0342471 52.222 90 42 1 1 89 1 90 4.23e-27 103
Msa1135870 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 8.16e-27 105
Msa1135870 MtrunA17_Chr5g0401731 49.020 102 51 1 14 115 15 115 1.08e-26 107
Msa1135870 MtrunA17_Chr4g0053431 43.609 133 65 3 14 142 5 131 1.59e-26 105
Msa1135870 MtrunA17_Chr6g0454921 48.039 102 52 1 14 115 15 115 2.76e-26 103
Msa1135870 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 9.93e-26 102
Msa1135870 MtrunA17_Chr7g0229131 58.904 73 30 0 44 116 4 76 1.10e-25 100
Msa1135870 MtrunA17_Chr3g0139671 44.660 103 56 1 14 116 85 186 4.04e-25 106
Msa1135870 MtrunA17_Chr3g0139671 31.132 106 71 2 14 118 33 137 1.32e-11 65.5
Msa1135870 MtrunA17_Chr7g0238631 47.573 103 53 1 14 116 113 214 2.04e-24 103
Msa1135870 MtrunA17_Chr1g0157731 41.748 103 59 1 14 116 91 192 7.92e-24 102
Msa1135870 MtrunA17_Chr1g0157731 31.132 106 71 2 14 118 39 143 2.57e-11 64.7
Msa1135870 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 1.26e-23 94.0
Msa1135870 MtrunA17_Chr6g0480581 44.554 101 55 1 14 114 4 103 1.33e-23 97.4
Msa1135870 MtrunA17_Chr7g0238651 36.364 121 75 1 17 135 10 130 2.27e-22 96.3
Msa1135870 MtrunA17_Chr5g0429661 40.000 125 72 2 10 134 118 239 4.04e-22 95.5
Msa1135870 MtrunA17_Chr5g0417621 41.905 105 60 1 14 118 134 237 6.71e-22 95.5
Msa1135870 MtrunA17_Chr6g0460671 41.176 102 59 1 14 115 99 199 7.26e-22 94.7
Msa1135870 MtrunA17_Chr4g0058991 40.909 110 64 1 9 118 204 312 9.56e-22 95.5
Msa1135870 MtrunA17_Chr3g0117511 41.905 105 60 1 14 118 183 286 1.98e-21 94.4
Msa1135870 MtrunA17_Chr4g0042501 37.069 116 72 1 14 129 105 219 5.50e-21 92.8
Msa1135870 MtrunA17_Chr5g0425591 45.783 83 44 1 12 93 9 91 5.52e-21 85.9
Msa1135870 MtrunA17_Chr6g0460661 41.237 97 56 1 14 110 16 111 6.12e-21 87.8
Msa1135870 MtrunA17_Chr5g0437321 44.340 106 57 2 8 112 12 116 6.51e-21 90.9
Msa1135870 MtrunA17_Chr7g0228531 41.379 116 65 3 12 126 218 331 1.28e-20 92.0
Msa1135870 MtrunA17_Chr3g0093811 54.430 79 34 1 44 122 14 90 1.12e-19 87.0
Msa1135870 MtrunA17_Chr3g0125801 39.640 111 66 1 8 118 10 119 2.81e-19 86.3
Msa1135870 MtrunA17_Chr5g0397841 42.708 96 54 1 14 109 110 204 4.12e-19 87.8
Msa1135870 MtrunA17_Chr6g0453751 42.391 92 44 2 11 93 19 110 1.59e-18 80.5
Msa1135870 MtrunA17_Chr7g0254261 38.889 108 65 1 14 121 89 195 2.17e-18 84.7
Msa1135870 MtrunA17_Chr7g0228481 38.793 116 68 3 12 126 218 331 3.33e-17 82.0
Msa1135870 MtrunA17_Chr8g0362231 36.522 115 72 1 17 131 25 138 4.47e-17 81.6
Msa1135870 MtrunA17_Chr5g0416341 38.614 101 61 1 17 117 29 128 1.47e-16 80.1
Msa1135870 MtrunA17_Chr7g0228401 43.023 86 48 1 25 110 290 374 2.60e-16 79.3
Msa1135870 MtrunA17_Chr1g0177901 40.594 101 58 2 23 123 3 101 3.07e-16 76.3
Msa1135870 MtrunA17_Chr7g0233061 37.069 116 61 4 14 123 180 289 4.43e-15 75.1
Msa1135870 MtrunA17_Chr1g0193901 51.724 58 27 1 12 68 11 68 4.71e-15 70.5
Msa1135870 MtrunA17_Chr1g0193891 51.724 58 27 1 12 68 11 68 4.71e-15 70.5
Msa1135870 MtrunA17_Chr1g0193871 51.724 58 27 1 12 68 11 68 4.71e-15 70.5
Msa1135870 MtrunA17_Chr1g0193881 51.724 58 27 1 12 68 11 68 4.71e-15 70.5
Msa1135870 MtrunA17_Chr7g0247141 61.702 47 17 1 1 46 1 47 5.27e-15 68.9
Msa1135870 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 5.66e-13 63.5
Msa1135870 MtrunA17_Chr5g0434891 66.667 39 13 0 77 115 1 39 6.64e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1135870 AT3G28910.1 55.183 328 106 8 1 308 1 307 6.17e-106 313
Msa1135870 AT5G62470.2 52.907 344 120 6 1 309 1 337 2.13e-104 310
Msa1135870 AT3G47600.1 53.453 333 114 8 1 309 1 316 8.64e-103 305
Msa1135870 AT5G62470.1 52.907 344 119 7 1 309 1 336 9.48e-103 305
Msa1135870 AT1G74650.1 51.497 334 109 9 1 307 1 308 3.02e-91 275
Msa1135870 AT1G08810.1 48.428 318 98 7 1 309 1 261 3.98e-85 258
Msa1135870 AT3G47600.2 47.751 289 110 8 45 309 39 310 2.94e-66 211
Msa1135870 AT3G01140.2 50.237 211 75 5 1 183 1 209 2.84e-62 202
Msa1135870 AT5G15310.4 72.881 118 32 0 1 118 1 118 2.28e-61 196
Msa1135870 AT5G15310.1 72.881 118 32 0 1 118 1 118 5.11e-61 198
Msa1135870 AT5G15310.2 72.881 118 32 0 1 118 1 118 5.18e-61 197
Msa1135870 AT3G01140.1 49.758 207 74 5 5 183 48 252 4.26e-59 195
Msa1135870 AT5G16770.4 50.000 194 89 2 1 188 1 192 7.33e-59 192
Msa1135870 AT5G16770.3 50.000 194 89 2 1 188 1 192 7.33e-59 192
Msa1135870 AT3G02940.2 68.966 116 36 0 1 116 1 116 1.20e-58 191
Msa1135870 AT5G16770.1 50.000 194 89 2 1 188 1 192 2.05e-58 191
Msa1135870 AT5G16770.2 50.000 194 89 2 1 188 1 192 2.05e-58 191
Msa1135870 AT3G02940.1 68.966 116 36 0 1 116 1 116 3.35e-58 190
Msa1135870 AT3G02940.3 68.966 116 36 0 1 116 1 116 3.35e-58 190
Msa1135870 AT2G31180.1 68.908 119 37 0 1 119 1 119 1.41e-57 186
Msa1135870 AT1G06180.1 67.460 126 41 0 1 126 1 126 1.71e-57 186
Msa1135870 AT3G23250.1 66.667 120 40 0 1 120 1 120 2.08e-57 187
Msa1135870 AT4G28110.1 66.387 119 40 0 1 119 1 119 2.49e-57 187
Msa1135870 AT3G61250.1 69.828 116 35 0 1 116 1 116 7.06e-57 186
Msa1135870 AT1G34670.1 67.241 116 38 0 1 116 1 116 5.57e-56 186
Msa1135870 AT4G21440.1 66.102 118 40 0 1 118 1 118 3.97e-55 183
Msa1135870 AT1G56160.1 65.217 115 40 0 2 116 4 118 7.14e-55 181
Msa1135870 AT4G05100.1 65.546 119 40 1 1 118 1 119 6.28e-54 179
Msa1135870 AT1G22640.1 64.655 116 41 0 1 116 1 116 3.29e-53 176
Msa1135870 AT5G10280.1 46.078 204 87 4 1 186 1 199 1.00e-52 177
Msa1135870 AT5G61420.2 63.793 116 42 0 1 116 1 116 1.38e-52 177
Msa1135870 AT2G16720.1 64.655 116 41 0 1 116 1 116 1.95e-52 174
Msa1135870 AT1G66230.1 66.102 118 40 0 1 118 1 118 2.50e-52 174
Msa1135870 AT5G54230.1 66.949 118 39 0 1 118 1 118 3.19e-52 175
Msa1135870 AT1G79180.1 63.559 118 43 0 2 119 4 121 3.27e-52 174
Msa1135870 AT4G17785.2 64.957 117 40 1 1 116 1 117 7.05e-52 175
Msa1135870 AT5G56110.1 64.655 116 41 0 1 116 1 116 7.53e-52 174
Msa1135870 AT5G07690.1 63.793 116 42 0 1 116 1 116 8.46e-52 174
Msa1135870 AT4G17785.1 64.957 117 40 1 1 116 1 117 1.06e-51 175
Msa1135870 AT5G60890.1 63.559 118 43 0 1 118 1 118 1.08e-51 173
Msa1135870 AT4G09460.1 63.793 116 42 0 1 116 1 116 1.61e-51 171
Msa1135870 AT4G38620.1 63.793 116 42 0 1 116 1 116 1.63e-51 172
Msa1135870 AT3G13540.1 55.556 144 58 2 5 142 16 159 2.40e-51 170
Msa1135870 AT5G65230.1 63.793 116 42 0 1 116 1 116 2.87e-51 172
Msa1135870 AT5G49330.1 62.931 116 43 0 1 116 1 116 3.77e-51 172
Msa1135870 AT1G35515.1 62.069 116 44 0 1 116 1 116 4.12e-51 169
Msa1135870 AT4G34990.1 62.931 116 43 0 1 116 1 116 6.79e-51 170
Msa1135870 AT1G18570.1 65.546 119 40 1 1 118 1 119 1.11e-50 172
Msa1135870 AT5G57620.1 61.417 127 48 1 1 126 1 127 1.19e-50 171
Msa1135870 AT1G74080.1 61.864 118 45 0 1 118 1 118 3.51e-50 170
Msa1135870 AT3G49690.1 64.463 121 42 1 1 120 1 121 5.02e-50 169
Msa1135870 AT1G16490.1 58.400 125 51 1 2 126 4 127 6.03e-50 167
Msa1135870 AT4G37780.1 61.157 121 46 1 1 120 1 121 8.43e-50 168
Msa1135870 AT4G12350.1 62.500 120 45 0 1 120 1 120 1.00e-49 167
Msa1135870 AT5G07700.1 61.207 116 45 0 1 116 1 116 1.35e-49 169
Msa1135870 AT5G07700.2 61.207 116 45 0 1 116 1 116 1.35e-49 169
Msa1135870 AT5G16600.1 63.559 118 43 0 1 118 1 118 1.43e-49 168
Msa1135870 AT2G47460.1 61.207 116 45 0 1 116 1 116 4.79e-49 168
Msa1135870 AT1G74430.1 64.407 118 42 0 1 118 1 118 6.03e-49 165
Msa1135870 AT5G65790.1 63.636 121 43 1 1 120 1 121 6.77e-49 167
Msa1135870 AT4G22680.1 63.559 118 43 0 1 118 1 118 9.66e-49 164
Msa1135870 AT3G62610.1 62.931 116 43 0 1 116 1 116 2.23e-48 166
Msa1135870 AT5G23000.1 62.393 117 43 1 1 116 1 117 2.77e-48 165
Msa1135870 AT1G63910.1 61.017 118 46 0 1 118 1 118 3.15e-48 166
Msa1135870 AT2G36890.1 63.248 117 42 1 1 116 1 117 5.56e-48 163
Msa1135870 AT2G36890.2 63.248 117 42 1 1 116 42 158 9.62e-48 164
Msa1135870 AT3G12820.1 62.069 116 44 0 3 118 5 120 1.76e-47 160
Msa1135870 AT5G14750.1 66.346 104 35 0 13 116 17 120 5.09e-47 158
Msa1135870 AT3G28470.1 60.909 110 43 0 1 110 1 110 1.70e-46 160
Msa1135870 AT5G62320.1 52.381 147 62 2 2 141 3 148 2.03e-46 157
Msa1135870 AT5G26660.1 50.000 150 66 1 1 141 1 150 3.32e-46 160
Msa1135870 AT1G18710.1 60.169 118 47 0 1 118 1 118 3.93e-46 157
Msa1135870 AT1G09540.1 55.147 136 61 0 1 136 1 136 5.04e-46 160
Msa1135870 AT1G79180.2 49.669 151 43 1 2 119 4 154 5.16e-46 159
Msa1135870 AT3G13890.2 58.621 116 48 0 1 116 1 116 6.27e-46 159
Msa1135870 AT5G14340.1 60.684 117 46 0 1 117 13 129 7.24e-46 157
Msa1135870 AT3G28910.2 43.651 252 101 8 77 308 1 231 9.40e-46 156
Msa1135870 AT4G01680.3 58.974 117 48 0 1 117 1 117 1.40e-45 155
Msa1135870 AT5G40330.1 64.423 104 37 0 13 116 13 116 1.71e-45 154
Msa1135870 AT4G01680.1 58.974 117 48 0 1 117 1 117 5.74e-45 156
Msa1135870 AT3G27920.1 64.423 104 37 0 13 116 15 118 1.61e-44 152
Msa1135870 AT5G35550.1 59.292 113 46 0 9 121 11 123 1.87e-44 153
Msa1135870 AT1G57560.1 56.780 118 51 0 1 118 1 118 3.02e-44 154
Msa1135870 AT1G57560.2 56.780 118 51 0 1 118 1 118 3.84e-44 152
Msa1135870 AT3G12720.1 57.658 111 47 0 6 116 16 126 4.68e-43 150
Msa1135870 AT3G13890.1 54.400 125 48 1 1 116 1 125 7.37e-43 152
Msa1135870 AT5G52600.1 58.407 113 44 1 6 115 3 115 9.32e-43 147
Msa1135870 AT3G01530.1 56.637 113 48 1 8 119 20 132 1.52e-41 144
Msa1135870 AT4G01680.2 53.488 129 48 1 1 117 1 129 1.83e-41 147
Msa1135870 AT2G32460.1 61.905 105 40 0 11 115 17 121 2.00e-41 150
Msa1135870 AT2G32460.2 61.905 105 40 0 11 115 5 109 2.24e-41 150
Msa1135870 AT3G30210.1 59.633 109 44 0 11 119 26 134 2.51e-41 145
Msa1135870 AT5G55020.1 60.748 107 42 0 12 118 26 132 3.22e-41 150
Msa1135870 AT1G66370.1 56.522 115 46 1 1 115 1 111 1.04e-40 143
Msa1135870 AT2G26960.1 60.377 106 42 0 9 114 17 122 1.22e-40 147
Msa1135870 AT5G06100.1 55.556 108 48 0 8 115 28 135 1.45e-40 147
Msa1135870 AT5G06100.5 55.556 108 48 0 8 115 28 135 4.38e-40 147
Msa1135870 AT5G06100.2 55.556 108 48 0 8 115 28 135 4.38e-40 147
Msa1135870 AT5G06100.3 55.556 108 48 0 8 115 28 135 4.38e-40 147
Msa1135870 AT5G06100.4 55.556 108 48 0 8 115 28 135 4.38e-40 147
Msa1135870 AT3G11440.2 55.769 104 46 0 12 115 41 144 4.75e-40 146
Msa1135870 AT4G26930.1 57.658 111 43 1 8 114 11 121 7.99e-40 144
Msa1135870 AT3G11440.3 55.769 104 46 0 12 115 41 144 1.74e-39 146
Msa1135870 AT3G11440.4 55.769 104 46 0 12 115 41 144 1.74e-39 146
Msa1135870 AT3G11440.1 55.769 104 46 0 12 115 41 144 1.74e-39 146
Msa1135870 AT3G27810.1 54.630 108 49 0 12 119 20 127 1.84e-39 139
Msa1135870 AT3G24310.1 58.716 109 45 0 9 117 15 123 2.24e-39 140
Msa1135870 AT4G13480.1 57.759 116 47 1 13 128 7 120 3.88e-39 139
Msa1135870 AT2G47190.1 56.604 106 46 0 12 117 20 125 6.84e-39 139
Msa1135870 AT5G12870.1 57.944 107 45 0 12 118 18 124 8.66e-39 139
Msa1135870 AT5G40350.1 54.630 108 49 0 12 119 17 124 2.46e-38 135
Msa1135870 AT3G08500.1 55.455 110 49 0 8 117 26 135 2.66e-38 139
Msa1135870 AT3G46130.1 51.786 112 54 0 9 120 6 117 1.08e-37 135
Msa1135870 AT1G25340.1 51.754 114 55 0 13 126 19 132 1.15e-37 136
Msa1135870 AT5G59780.3 51.786 112 54 0 9 120 5 116 3.18e-37 133
Msa1135870 AT4G25560.1 52.991 117 55 0 10 126 8 124 4.27e-37 134
Msa1135870 AT1G68320.1 50.427 117 58 0 10 126 17 133 7.84e-37 134
Msa1135870 AT5G52260.1 45.930 172 81 4 9 180 9 168 1.02e-36 133
Msa1135870 AT3G48920.1 51.304 115 54 1 9 121 15 129 1.06e-36 132
Msa1135870 AT1G48000.1 53.774 106 49 0 12 117 32 137 1.61e-36 132
Msa1135870 AT1G66380.1 57.547 106 45 0 10 115 6 111 1.40e-35 126
Msa1135870 AT1G74650.3 40.310 258 101 9 77 307 1 232 1.12e-34 127
Msa1135870 AT1G66390.1 56.604 106 46 0 10 115 6 111 2.39e-34 126
Msa1135870 AT1G25340.2 50.000 114 52 1 13 126 19 127 4.58e-34 126
Msa1135870 AT1G56650.1 56.604 106 46 0 10 115 6 111 4.62e-34 125
Msa1135870 AT1G25340.3 50.000 114 52 1 13 126 19 127 7.60e-34 126
Msa1135870 AT3G60460.1 50.467 107 52 1 9 114 8 114 1.16e-33 125
Msa1135870 AT5G49620.1 50.435 115 57 0 12 126 26 140 1.52e-32 123
Msa1135870 AT3G06490.1 49.580 119 60 0 8 126 15 133 1.73e-32 123
Msa1135870 AT3G53200.1 48.246 114 59 0 9 122 6 119 5.58e-32 119
Msa1135870 AT5G35550.2 67.532 77 25 0 45 121 50 126 1.05e-31 119
Msa1135870 AT5G14750.3 72.464 69 19 0 48 116 18 86 4.01e-31 115
Msa1135870 AT3G12820.2 70.423 71 21 0 48 118 2 72 3.01e-30 114
Msa1135870 AT5G49620.2 44.961 129 57 1 12 126 26 154 4.80e-29 114
Msa1135870 AT2G26950.1 47.525 101 53 0 9 109 13 113 9.81e-29 114
Msa1135870 AT5G26660.2 47.748 111 49 1 40 141 9 119 1.54e-28 112
Msa1135870 AT2G39880.1 49.057 106 45 2 14 115 50 150 9.03e-28 111
Msa1135870 AT1G74650.2 38.057 247 100 9 88 307 7 227 4.33e-27 107
Msa1135870 AT2G23290.1 50.000 102 50 1 14 115 13 113 4.79e-27 108
Msa1135870 AT5G59780.2 56.410 78 34 0 43 120 18 95 2.07e-26 104
Msa1135870 AT4G37260.1 48.039 102 52 1 14 115 13 113 2.59e-26 106
Msa1135870 AT3G55730.1 47.170 106 47 2 14 115 56 156 3.09e-26 107
Msa1135870 AT3G46130.4 56.410 78 34 0 43 120 18 95 3.25e-26 104
Msa1135870 AT3G46130.3 57.143 77 33 0 44 120 9 85 3.29e-26 104
Msa1135870 AT5G02320.1 48.077 104 53 1 14 117 127 229 4.90e-26 108
Msa1135870 AT5G02320.2 48.077 104 53 1 14 117 127 229 4.90e-26 108
Msa1135870 AT5G02320.3 48.077 104 53 1 14 117 67 169 6.76e-26 107
Msa1135870 AT3G09230.1 42.400 125 52 3 14 134 55 163 2.17e-25 105
Msa1135870 AT3G53200.2 52.381 84 40 0 39 122 3 86 6.73e-25 100
Msa1135870 AT3G27810.2 56.000 75 33 0 45 119 4 78 8.26e-25 99.0
Msa1135870 AT5G11510.3 43.689 103 57 1 14 116 81 182 2.24e-24 104
Msa1135870 AT5G11510.3 31.132 106 71 2 14 118 29 133 2.34e-11 65.5
Msa1135870 AT5G11510.1 43.689 103 57 1 14 116 81 182 2.24e-24 104
Msa1135870 AT5G11510.1 31.132 106 71 2 14 118 29 133 2.34e-11 65.5
Msa1135870 AT5G11510.4 43.689 103 57 1 14 116 81 182 2.24e-24 104
Msa1135870 AT5G11510.4 31.132 106 71 2 14 118 29 133 2.34e-11 65.5
Msa1135870 AT5G11510.2 43.925 107 51 2 14 116 81 182 2.54e-24 103
Msa1135870 AT5G11510.2 31.132 106 71 2 14 118 29 133 2.47e-11 65.1
Msa1135870 AT5G11510.5 43.925 107 51 2 14 116 81 182 2.83e-24 103
Msa1135870 AT5G11510.5 31.132 106 71 2 14 118 29 133 2.57e-11 65.1
Msa1135870 AT3G27785.1 42.241 116 66 1 9 124 184 298 5.84e-24 102
Msa1135870 AT1G69560.1 42.727 110 62 1 9 118 102 210 6.21e-24 100
Msa1135870 AT4G32730.5 41.748 103 59 1 14 116 87 188 6.79e-24 102
Msa1135870 AT4G32730.4 41.748 103 59 1 14 116 87 188 6.79e-24 102
Msa1135870 AT4G32730.3 41.748 103 59 1 14 116 87 188 6.79e-24 102
Msa1135870 AT4G32730.2 41.748 103 59 1 14 116 87 188 6.79e-24 102
Msa1135870 AT4G32730.1 41.748 103 59 1 14 116 87 188 7.32e-24 102
Msa1135870 AT1G69560.2 42.727 110 62 1 9 118 118 226 7.40e-24 100
Msa1135870 AT1G66380.3 63.889 72 26 0 44 115 7 78 9.32e-24 94.0
Msa1135870 AT5G40350.2 56.000 75 33 0 45 119 5 79 1.05e-23 95.9
Msa1135870 AT3G50060.1 45.098 102 55 1 14 115 6 106 2.15e-23 98.2
Msa1135870 AT5G40360.1 39.823 113 66 2 9 121 153 263 2.30e-23 99.4
Msa1135870 AT1G17950.1 43.137 102 57 1 14 115 5 105 2.67e-23 97.1
Msa1135870 AT1G26780.1 41.284 109 63 1 14 122 98 205 3.78e-23 97.4
Msa1135870 AT5G67300.1 32.022 178 96 3 14 191 6 158 3.79e-23 97.8
Msa1135870 AT1G22640.3 68.966 58 18 0 59 116 2 59 4.19e-23 95.1
Msa1135870 AT5G14750.4 70.690 58 17 0 59 116 2 59 4.82e-23 93.2
Msa1135870 AT5G14750.2 70.690 58 17 0 59 116 2 59 4.82e-23 93.2
Msa1135870 AT1G26780.2 41.284 109 63 1 14 122 98 205 8.02e-23 97.8
Msa1135870 AT3G09370.2 45.098 102 55 1 14 115 135 235 1.12e-22 98.6
Msa1135870 AT3G23250.2 66.129 62 21 0 59 120 2 63 1.18e-22 94.7
Msa1135870 AT3G09370.1 45.098 102 55 1 14 115 130 230 1.22e-22 98.6
Msa1135870 AT3G09370.3 45.098 102 55 1 14 115 143 243 1.42e-22 98.6
Msa1135870 AT2G37630.1 37.190 121 73 2 17 135 7 126 2.82e-22 96.3
Msa1135870 AT5G11050.1 36.567 134 81 3 12 143 103 234 4.45e-22 96.3
Msa1135870 AT5G58850.1 39.655 116 64 2 14 124 105 219 4.46e-22 96.7
Msa1135870 AT1G66380.2 47.475 99 51 1 10 107 6 104 5.33e-22 89.7
Msa1135870 AT4G18770.1 38.393 112 68 1 9 120 212 322 5.73e-22 96.3
Msa1135870 AT5G17800.1 40.187 107 63 1 14 120 93 198 3.68e-21 92.4
Msa1135870 AT1G18960.1 43.689 103 55 2 14 116 10 109 4.76e-21 92.0
Msa1135870 AT4G33450.1 37.838 111 68 1 9 119 14 123 5.54e-21 90.5
Msa1135870 AT1G73410.1 41.509 106 61 1 14 119 6 110 1.01e-20 89.7
Msa1135870 AT1G73410.2 41.509 106 61 1 14 119 6 110 1.89e-20 88.2
Msa1135870 AT1G08810.3 34.052 232 87 8 88 310 5 179 3.89e-20 87.0
Msa1135870 AT1G08810.2 34.052 232 87 8 88 310 5 179 3.89e-20 87.0
Msa1135870 AT1G71030.1 48.148 81 41 1 38 118 7 86 2.78e-19 84.7
Msa1135870 AT5G39700.1 37.273 110 68 1 9 118 51 159 3.78e-19 84.3
Msa1135870 AT1G71030.2 52.941 68 32 0 51 118 5 72 3.82e-19 84.0
Msa1135870 AT3G29020.1 36.190 105 66 1 14 118 65 168 6.13e-19 84.7
Msa1135870 AT2G25230.1 37.410 139 72 5 9 135 21 156 8.87e-19 84.3
Msa1135870 AT3G29020.2 36.190 105 66 1 14 118 67 170 1.36e-18 85.1
Msa1135870 AT4G00540.2 38.182 110 64 2 12 118 101 209 1.55e-17 83.2
Msa1135870 AT2G02820.3 35.246 122 75 2 17 135 33 153 1.68e-17 82.4
Msa1135870 AT4G00540.1 38.182 110 64 2 12 118 99 207 2.41e-17 82.8
Msa1135870 AT2G02820.2 35.246 122 75 2 17 135 33 153 2.69e-17 82.8
Msa1135870 AT1G14350.2 38.614 101 61 1 17 117 28 127 3.03e-17 82.4
Msa1135870 AT1G14350.1 38.614 101 61 1 17 117 28 127 3.03e-17 82.4
Msa1135870 AT2G02820.1 35.246 122 75 2 17 135 33 153 3.18e-17 82.4
Msa1135870 AT5G40430.1 34.711 121 72 3 9 124 49 167 1.17e-15 75.9
Msa1135870 AT4G25560.2 53.704 54 25 0 73 126 5 58 1.41e-12 66.6
Msa1135870 AT5G59780.1 50.980 51 25 0 70 120 1 51 1.06e-11 63.2
Msa1135870 AT3G46130.2 50.980 51 25 0 70 120 1 51 1.46e-11 63.2

Find 73 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGAACACAATTTAAAGTT+AGG 0.242581 7_4:-3633256 Msa1135870:three_prime_UTR
AACATAGCTCGTTTACTAAA+AGG 0.252975 7_4:-3633886 Msa1135870:CDS
CTAAAACCTCTTGATTTGAT+AGG 0.282858 7_4:+3635427 None:intergenic
CTTCTTTCCCATTGACCTCT+TGG 0.294000 7_4:+3634069 None:intergenic
AAGAACATGGTCCTGGAAAT+TGG 0.298566 7_4:-3635186 Msa1135870:CDS
AGTTGTCCTGAAAAGGTATT+AGG 0.303742 7_4:-3633568 Msa1135870:CDS
TGTTGCTTGCTTGGTTCTAA+TGG 0.351821 7_4:-3633411 Msa1135870:three_prime_UTR
GAAACATTTGAATCTTTGTT+TGG 0.358400 7_4:-3633748 Msa1135870:CDS
ATGTCATTATCTGTTCTTTG+TGG 0.377477 7_4:+3634204 None:intergenic
GTACTAACCGATGATTTGAT+TGG 0.381105 7_4:+3633850 None:intergenic
GAAAATGAGTTACTATTTGT+AGG 0.397920 7_4:+3633958 None:intergenic
TTGTGATGATGTTGCTTGCT+TGG 0.400090 7_4:-3633420 Msa1135870:three_prime_UTR
GGAACAGCCCTCCAATTTCC+AGG 0.403047 7_4:+3635175 None:intergenic
GCAAAAGTTGCAGACTTAGA+TGG 0.403906 7_4:-3634859 Msa1135870:CDS
ACAAGTATGATATCTTCTTC+AGG 0.408889 7_4:+3635220 None:intergenic
AAGGTCTATAGAATAGAAAT+TGG 0.417780 7_4:-3635348 Msa1135870:five_prime_UTR
TTCCTAAAAGATCTTGAAGA+TGG 0.422826 7_4:+3634771 None:intergenic
TATGAACTATTAACCTGTCT+TGG 0.426618 7_4:+3635150 None:intergenic
AGATTGACCTGGTTCTTTAG+TGG 0.427373 7_4:+3633933 None:intergenic
TGGAACACAATTTAAAGTTA+GGG 0.434797 7_4:-3633255 Msa1135870:three_prime_UTR
AGAGAGGGAGAAGAAGAAAA+AGG 0.442631 7_4:-3635367 Msa1135870:five_prime_UTR
CCATTTCTCAAGCAAAGAAA+AGG 0.449839 7_4:+3633606 None:intergenic
TCTTGTAAAACCGTTGCGTC+TGG 0.450422 7_4:+3633664 None:intergenic
AACTATTAACCTGTCTTGGT+TGG 0.452548 7_4:+3635154 None:intergenic
AAGAATTCCAAGAGGTCAAT+GGG 0.456644 7_4:-3634076 Msa1135870:CDS
ACCTAAGGCCAGGAATCAAA+AGG 0.458436 7_4:-3634829 Msa1135870:CDS
AAAGAATTCCAAGAGGTCAA+TGG 0.463998 7_4:-3634077 Msa1135870:CDS
AAAATGAGTTACTATTTGTA+GGG 0.472669 7_4:+3633959 None:intergenic
CTCTAAAATCGTTGCAATTG+TGG 0.474970 7_4:-3633275 Msa1135870:three_prime_UTR
AGCAGAATCAAAGTTGTTGA+AGG 0.476547 7_4:+3633804 None:intergenic
TGAAGCAAGTTGTCCTGAAA+AGG 0.483879 7_4:-3633575 Msa1135870:CDS
CAATCTTTGATGTATTGCCT+TGG 0.485774 7_4:-3633157 Msa1135870:three_prime_UTR
CATTATCTGTTCTTTGTGGA+AGG 0.487830 7_4:+3634208 None:intergenic
ATTGATTCTGAACCAACATC+AGG 0.495731 7_4:+3633631 None:intergenic
TATATACAAGAACATGGTCC+TGG 0.507906 7_4:-3635193 Msa1135870:CDS
TTTGATTCTGCTTCTAGTAG+TGG 0.508963 7_4:-3633793 Msa1135870:CDS
AGGGCTGTTCCAACCAAGAC+AGG 0.512302 7_4:-3635163 Msa1135870:intron
AAGCTCAAGAAATCACAAAC+AGG 0.513721 7_4:-3634150 Msa1135870:CDS
TAGCTCGTTTACTAAAAGGT+TGG 0.524179 7_4:-3633882 Msa1135870:CDS
CCTAAGGCCAGGAATCAAAA+GGG 0.528003 7_4:-3634828 Msa1135870:CDS
TTGAAACCTATCAAATCAAG+AGG 0.529011 7_4:-3635433 None:intergenic
TTATATGATTTCTATAGGAA+AGG 0.530672 7_4:-3633189 Msa1135870:three_prime_UTR
TGGACTAATTACCTAAGGCC+AGG 0.531588 7_4:-3634839 Msa1135870:CDS
TGTATCTTACTGCAACGTAA+AGG 0.535748 7_4:+3633342 None:intergenic
TTCAAGTTCTGAAATATATG+TGG 0.543756 7_4:-3633232 Msa1135870:three_prime_UTR
TGCTTCTAGTAGTGGAACAA+AGG 0.546510 7_4:-3633785 Msa1135870:CDS
ACTTCAAACAGATATTCAAA+TGG 0.548282 7_4:-3634046 Msa1135870:CDS
CCTGAAAAGGTATTAGGTTG+TGG 0.555878 7_4:-3633562 Msa1135870:CDS
AAAAGAGAAACAAAGAAACA+TGG 0.557302 7_4:-3635293 Msa1135870:exon
ATCTTTGTCACCAGACGCAA+CGG 0.557723 7_4:-3633674 Msa1135870:CDS
AAAGAGAAACAAAGAAACAT+GGG 0.560455 7_4:-3635292 Msa1135870:exon
ATATCTTCTTCAGGAGTCCA+TGG 0.561586 7_4:+3635229 None:intergenic
CATTTCTCAAGCAAAGAAAA+GGG 0.562614 7_4:+3633607 None:intergenic
GCTTCTAGTAGTGGAACAAA+GGG 0.568848 7_4:-3633784 Msa1135870:CDS
GTCTATAGAATAGAAATTGG+TGG 0.569327 7_4:-3635345 Msa1135870:five_prime_UTR
TTAGATGGACTAATTACCTA+AGG 0.574462 7_4:-3634844 Msa1135870:CDS
GATGAAAGTAAGCCTGATGT+TGG 0.577667 7_4:-3633643 Msa1135870:CDS
CTTGTTTCTCTTCAGTACCA+AGG 0.584182 7_4:+3633140 None:intergenic
GGGTAACTTCACTGAACAAG+AGG 0.588024 7_4:-3634807 Msa1135870:CDS
AAGTGATCATACACTGAGAG+AGG 0.593879 7_4:-3635383 Msa1135870:five_prime_UTR
AGTGATCATACACTGAGAGA+GGG 0.610005 7_4:-3635382 Msa1135870:five_prime_UTR
AACATGGTCCTGGAAATTGG+AGG 0.614224 7_4:-3635183 Msa1135870:CDS
GATGACTCCAAAGACTCCAA+AGG 0.614822 7_4:+3633718 None:intergenic
ACACCTTCTTTGTCACAACA+AGG 0.616257 7_4:+3635262 None:intergenic
CCACCTTGTTGTGACAAAGA+AGG 0.618215 7_4:-3635265 Msa1135870:CDS
ACATGGTCCTGGAAATTGGA+GGG 0.621706 7_4:-3635182 Msa1135870:CDS
CAGTAAGATACAAACAAATG+TGG 0.641783 7_4:-3633331 Msa1135870:three_prime_UTR
ATACTAGCGAAGCTGAAATG+TGG 0.643699 7_4:-3633443 Msa1135870:three_prime_UTR
GTTACTTATATACAAGAACA+TGG 0.665375 7_4:-3635199 Msa1135870:CDS
CTAAGGCCAGGAATCAAAAG+GGG 0.682983 7_4:-3634827 Msa1135870:CDS
CCTTCTTTGTCACAACAAGG+TGG 0.693026 7_4:+3635265 None:intergenic
GAAAAGGTATTAGGTTGTGG+TGG 0.702340 7_4:-3633559 Msa1135870:CDS
GCATCTCAAAGAATTCCAAG+AGG 0.704482 7_4:-3634084 Msa1135870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTATTTTTATTACTTAA+TGG - chr7_4:3633494-3633513 Msa1135870:three_prime_UTR 10.0%
!!! ATTAATTTATTTGATTTTTG+TGG - chr7_4:3633575-3633594 Msa1135870:CDS 10.0%
!!! CAAATTATTTATTTGTTTTA+AGG - chr7_4:3633789-3633808 Msa1135870:CDS 10.0%
!! TACAAAAAATTATAGAAATA+GGG + chr7_4:3634039-3634058 None:intergenic 10.0%
!! ATACAAAAAATTATAGAAAT+AGG + chr7_4:3634040-3634059 None:intergenic 10.0%
!! AAAAAAACTACTAAAAAAAT+TGG + chr7_4:3634181-3634200 None:intergenic 10.0%
!!! ATTTTTTTAGTAGTTTTTTT+TGG - chr7_4:3634181-3634200 Msa1135870:CDS 10.0%
!!! GTTTTATTTTTATTACTTAA+TGG - chr7_4:3633494-3633513 Msa1135870:three_prime_UTR 10.0%
!!! ATTAATTTATTTGATTTTTG+TGG - chr7_4:3633575-3633594 Msa1135870:CDS 10.0%
!!! CAAATTATTTATTTGTTTTA+AGG - chr7_4:3633789-3633808 Msa1135870:CDS 10.0%
!! TACAAAAAATTATAGAAATA+GGG + chr7_4:3634039-3634058 None:intergenic 10.0%
!! ATACAAAAAATTATAGAAAT+AGG + chr7_4:3634040-3634059 None:intergenic 10.0%
!! AAAAAAACTACTAAAAAAAT+TGG + chr7_4:3634181-3634200 None:intergenic 10.0%
!!! ATTTTTTTAGTAGTTTTTTT+TGG - chr7_4:3634181-3634200 Msa1135870:CDS 10.0%
!! TTTAAATATCCCTAAAAAAA+AGG - chr7_4:3634081-3634100 Msa1135870:CDS 15.0%
!! ATAATGACATAAAAAACTAT+TGG - chr7_4:3634294-3634313 Msa1135870:intron 15.0%
!!! AAATTAGAAGATAATTTTTG+TGG + chr7_4:3634494-3634513 None:intergenic 15.0%
!!! TTGTTTTATATGATTTCTAT+AGG - chr7_4:3635291-3635310 Msa1135870:exon 15.0%
!! TTTAAATATCCCTAAAAAAA+AGG - chr7_4:3634081-3634100 Msa1135870:CDS 15.0%
!! ATAATGACATAAAAAACTAT+TGG - chr7_4:3634294-3634313 Msa1135870:intron 15.0%
!!! AAATTAGAAGATAATTTTTG+TGG + chr7_4:3634494-3634513 None:intergenic 15.0%
!!! TTGTTTTATATGATTTCTAT+AGG - chr7_4:3635291-3635310 Msa1135870:exon 15.0%
!! GTATATCATAGATCATTAAT+AGG - chr7_4:3633422-3633441 Msa1135870:three_prime_UTR 20.0%
!! TGATCATGAATACATTATTT+AGG - chr7_4:3633472-3633491 Msa1135870:three_prime_UTR 20.0%
!!! TTTTTGTGGATTAATTTTTC+AGG - chr7_4:3633589-3633608 Msa1135870:CDS 20.0%
!!! TTTTGTGGATTAATTTTTCA+GGG - chr7_4:3633590-3633609 Msa1135870:CDS 20.0%
!!! AGCATTTGATTTCATTTTTT+AGG - chr7_4:3633883-3633902 Msa1135870:CDS 20.0%
!!! ATTAAATTTAGGACATAAGT+TGG - chr7_4:3633923-3633942 Msa1135870:CDS 20.0%
!! ATCTTTATGGAATTAAAAAC+AGG + chr7_4:3633959-3633978 None:intergenic 20.0%
!! TCATAACTAGTATATCTTTA+TGG + chr7_4:3633972-3633991 None:intergenic 20.0%
!! TTATGAAAGAATATAAGTGT+TGG - chr7_4:3633986-3634005 Msa1135870:CDS 20.0%
!!! TTAGCAAATCCTTTTTTTTA+GGG + chr7_4:3634093-3634112 None:intergenic 20.0%
!!! ATTAGCAAATCCTTTTTTTT+AGG + chr7_4:3634094-3634113 None:intergenic 20.0%
!! AAAATGAGTTACTATTTGTA+GGG + chr7_4:3634529-3634548 None:intergenic 20.0%
!!! TTAGTTTTAATCTGCATTTA+CGG - chr7_4:3634981-3635000 Msa1135870:intron 20.0%
!! TTATATGATTTCTATAGGAA+AGG - chr7_4:3635296-3635315 Msa1135870:exon 20.0%
!! GTATATCATAGATCATTAAT+AGG - chr7_4:3633422-3633441 Msa1135870:three_prime_UTR 20.0%
!! TGATCATGAATACATTATTT+AGG - chr7_4:3633472-3633491 Msa1135870:three_prime_UTR 20.0%
!!! TTTTTGTGGATTAATTTTTC+AGG - chr7_4:3633589-3633608 Msa1135870:CDS 20.0%
!!! TTTTGTGGATTAATTTTTCA+GGG - chr7_4:3633590-3633609 Msa1135870:CDS 20.0%
!!! AGCATTTGATTTCATTTTTT+AGG - chr7_4:3633883-3633902 Msa1135870:CDS 20.0%
!!! ATTAAATTTAGGACATAAGT+TGG - chr7_4:3633923-3633942 Msa1135870:CDS 20.0%
!! ATCTTTATGGAATTAAAAAC+AGG + chr7_4:3633959-3633978 None:intergenic 20.0%
!! TCATAACTAGTATATCTTTA+TGG + chr7_4:3633972-3633991 None:intergenic 20.0%
!! TTATGAAAGAATATAAGTGT+TGG - chr7_4:3633986-3634005 Msa1135870:CDS 20.0%
!!! TTAGCAAATCCTTTTTTTTA+GGG + chr7_4:3634093-3634112 None:intergenic 20.0%
!!! ATTAGCAAATCCTTTTTTTT+AGG + chr7_4:3634094-3634113 None:intergenic 20.0%
!! AAAATGAGTTACTATTTGTA+GGG + chr7_4:3634529-3634548 None:intergenic 20.0%
!!! TTAGTTTTAATCTGCATTTA+CGG - chr7_4:3634981-3635000 Msa1135870:intron 20.0%
!! TTATATGATTTCTATAGGAA+AGG - chr7_4:3635296-3635315 Msa1135870:exon 20.0%
! AAGGTCTATAGAATAGAAAT+TGG - chr7_4:3633137-3633156 Msa1135870:three_prime_UTR 25.0%
! AAAAGAGAAACAAAGAAACA+TGG - chr7_4:3633192-3633211 Msa1135870:three_prime_UTR 25.0%
! AAAGAGAAACAAAGAAACAT+GGG - chr7_4:3633193-3633212 Msa1135870:three_prime_UTR 25.0%
! GTTACTTATATACAAGAACA+TGG - chr7_4:3633286-3633305 Msa1135870:three_prime_UTR 25.0%
!!! TTCAAGATCTTTTAGGAAAT+AGG - chr7_4:3633719-3633738 Msa1135870:CDS 25.0%
! AGTAGCAAATTATGAAGAAA+AGG + chr7_4:3633749-3633768 None:intergenic 25.0%
! TAGGGACACAAATTAAAAAT+AGG + chr7_4:3634021-3634040 None:intergenic 25.0%
! TATATTAGACTTGTCCTAAA+TGG - chr7_4:3634057-3634076 Msa1135870:CDS 25.0%
! AGGGATATTTAAATCCATTT+AGG + chr7_4:3634074-3634093 None:intergenic 25.0%
! AACATTTATGATGTAACAGA+TGG - chr7_4:3634237-3634256 Msa1135870:intron 25.0%
! ACATTTATGATGTAACAGAT+GGG - chr7_4:3634238-3634257 Msa1135870:intron 25.0%
! ACTTCAAACAGATATTCAAA+TGG - chr7_4:3634439-3634458 Msa1135870:intron 25.0%
! GAAAATGAGTTACTATTTGT+AGG + chr7_4:3634530-3634549 None:intergenic 25.0%
! GAAAAATCCAATCAAATCAT+CGG - chr7_4:3634628-3634647 Msa1135870:intron 25.0%
! GAAACATTTGAATCTTTGTT+TGG - chr7_4:3634737-3634756 Msa1135870:intron 25.0%
!! TGGAACACAATTTAAAGTTA+GGG - chr7_4:3635230-3635249 Msa1135870:CDS 25.0%
!!! TTCAAGTTCTGAAATATATG+TGG - chr7_4:3635253-3635272 Msa1135870:CDS 25.0%
! AAGGTCTATAGAATAGAAAT+TGG - chr7_4:3633137-3633156 Msa1135870:three_prime_UTR 25.0%
! AAAAGAGAAACAAAGAAACA+TGG - chr7_4:3633192-3633211 Msa1135870:three_prime_UTR 25.0%
! AAAGAGAAACAAAGAAACAT+GGG - chr7_4:3633193-3633212 Msa1135870:three_prime_UTR 25.0%
! GTTACTTATATACAAGAACA+TGG - chr7_4:3633286-3633305 Msa1135870:three_prime_UTR 25.0%
!!! TTCAAGATCTTTTAGGAAAT+AGG - chr7_4:3633719-3633738 Msa1135870:CDS 25.0%
! AGTAGCAAATTATGAAGAAA+AGG + chr7_4:3633749-3633768 None:intergenic 25.0%
! TAGGGACACAAATTAAAAAT+AGG + chr7_4:3634021-3634040 None:intergenic 25.0%
! TATATTAGACTTGTCCTAAA+TGG - chr7_4:3634057-3634076 Msa1135870:CDS 25.0%
! AGGGATATTTAAATCCATTT+AGG + chr7_4:3634074-3634093 None:intergenic 25.0%
! AACATTTATGATGTAACAGA+TGG - chr7_4:3634237-3634256 Msa1135870:intron 25.0%
! ACATTTATGATGTAACAGAT+GGG - chr7_4:3634238-3634257 Msa1135870:intron 25.0%
! ACTTCAAACAGATATTCAAA+TGG - chr7_4:3634439-3634458 Msa1135870:intron 25.0%
! GAAAATGAGTTACTATTTGT+AGG + chr7_4:3634530-3634549 None:intergenic 25.0%
! GAAAAATCCAATCAAATCAT+CGG - chr7_4:3634628-3634647 Msa1135870:intron 25.0%
! GAAACATTTGAATCTTTGTT+TGG - chr7_4:3634737-3634756 Msa1135870:intron 25.0%
!! TGGAACACAATTTAAAGTTA+GGG - chr7_4:3635230-3635249 Msa1135870:CDS 25.0%
!!! TTCAAGTTCTGAAATATATG+TGG - chr7_4:3635253-3635272 Msa1135870:CDS 25.0%
GTCTATAGAATAGAAATTGG+TGG - chr7_4:3633140-3633159 Msa1135870:three_prime_UTR 30.0%
!! GACAAAGAAGGTGTTAAAAA+AGG - chr7_4:3633232-3633251 Msa1135870:three_prime_UTR 30.0%
ACAAGTATGATATCTTCTTC+AGG + chr7_4:3633268-3633287 None:intergenic 30.0%
TATGAACTATTAACCTGTCT+TGG + chr7_4:3633338-3633357 None:intergenic 30.0%
!! TTAGATGGACTAATTACCTA+AGG - chr7_4:3633641-3633660 Msa1135870:CDS 30.0%
! ATCCATCTTCAAGATCTTTT+AGG - chr7_4:3633712-3633731 Msa1135870:CDS 30.0%
TTCCTAAAAGATCTTGAAGA+TGG + chr7_4:3633717-3633736 None:intergenic 30.0%
TTATGATTCACATGTCTAAC+TGG - chr7_4:3634212-3634231 Msa1135870:CDS 30.0%
ATGTCATTATCTGTTCTTTG+TGG + chr7_4:3634284-3634303 None:intergenic 30.0%
!!! TGCTTCATTAAGTGCTTTTT+TGG + chr7_4:3634465-3634484 None:intergenic 30.0%
AACATAGCTCGTTTACTAAA+AGG - chr7_4:3634599-3634618 Msa1135870:intron 30.0%
!!! TTTGTTTGGTTTTGAACCTT+TGG - chr7_4:3634751-3634770 Msa1135870:intron 30.0%
CATTTCTCAAGCAAAGAAAA+GGG + chr7_4:3634881-3634900 None:intergenic 30.0%
CAGTAAGATACAAACAAATG+TGG - chr7_4:3635154-3635173 Msa1135870:intron 30.0%
! GTGGAACACAATTTAAAGTT+AGG - chr7_4:3635229-3635248 Msa1135870:CDS 30.0%
! AGTCAAGCAAGTTTTCATTA+TGG + chr7_4:3635411-3635430 None:intergenic 30.0%
GTCTATAGAATAGAAATTGG+TGG - chr7_4:3633140-3633159 Msa1135870:three_prime_UTR 30.0%
!! GACAAAGAAGGTGTTAAAAA+AGG - chr7_4:3633232-3633251 Msa1135870:three_prime_UTR 30.0%
ACAAGTATGATATCTTCTTC+AGG + chr7_4:3633268-3633287 None:intergenic 30.0%
TATGAACTATTAACCTGTCT+TGG + chr7_4:3633338-3633357 None:intergenic 30.0%
!! TTAGATGGACTAATTACCTA+AGG - chr7_4:3633641-3633660 Msa1135870:CDS 30.0%
! ATCCATCTTCAAGATCTTTT+AGG - chr7_4:3633712-3633731 Msa1135870:CDS 30.0%
TTCCTAAAAGATCTTGAAGA+TGG + chr7_4:3633717-3633736 None:intergenic 30.0%
TTATGATTCACATGTCTAAC+TGG - chr7_4:3634212-3634231 Msa1135870:CDS 30.0%
ATGTCATTATCTGTTCTTTG+TGG + chr7_4:3634284-3634303 None:intergenic 30.0%
!!! TGCTTCATTAAGTGCTTTTT+TGG + chr7_4:3634465-3634484 None:intergenic 30.0%
AACATAGCTCGTTTACTAAA+AGG - chr7_4:3634599-3634618 Msa1135870:intron 30.0%
!!! TTTGTTTGGTTTTGAACCTT+TGG - chr7_4:3634751-3634770 Msa1135870:intron 30.0%
CATTTCTCAAGCAAAGAAAA+GGG + chr7_4:3634881-3634900 None:intergenic 30.0%
CAGTAAGATACAAACAAATG+TGG - chr7_4:3635154-3635173 Msa1135870:intron 30.0%
! GTGGAACACAATTTAAAGTT+AGG - chr7_4:3635229-3635248 Msa1135870:CDS 30.0%
! AGTCAAGCAAGTTTTCATTA+TGG + chr7_4:3635411-3635430 None:intergenic 30.0%
! AAGGTGTTAAAAAAGGACCA+TGG - chr7_4:3633239-3633258 Msa1135870:three_prime_UTR 35.0%
TATATACAAGAACATGGTCC+TGG - chr7_4:3633292-3633311 Msa1135870:three_prime_UTR 35.0%
AACTATTAACCTGTCTTGGT+TGG + chr7_4:3633334-3633353 None:intergenic 35.0%
TAGGAAAATCATGATCCAAG+AGG - chr7_4:3633441-3633460 Msa1135870:three_prime_UTR 35.0%
CATTATCTGTTCTTTGTGGA+AGG + chr7_4:3634280-3634299 None:intergenic 35.0%
AAGCTCAAGAAATCACAAAC+AGG - chr7_4:3634335-3634354 Msa1135870:intron 35.0%
AAAGAATTCCAAGAGGTCAA+TGG - chr7_4:3634408-3634427 Msa1135870:intron 35.0%
AAGAATTCCAAGAGGTCAAT+GGG - chr7_4:3634409-3634428 Msa1135870:intron 35.0%
! TTTTCTTCCACTAAAGAACC+AGG - chr7_4:3634545-3634564 Msa1135870:intron 35.0%
TAGCTCGTTTACTAAAAGGT+TGG - chr7_4:3634603-3634622 Msa1135870:intron 35.0%
GTACTAACCGATGATTTGAT+TGG + chr7_4:3634638-3634657 None:intergenic 35.0%
AGCAGAATCAAAGTTGTTGA+AGG + chr7_4:3634684-3634703 None:intergenic 35.0%
TTTGATTCTGCTTCTAGTAG+TGG - chr7_4:3634692-3634711 Msa1135870:intron 35.0%
!!! TTTTGAACCTTTGGAGTCTT+TGG - chr7_4:3634760-3634779 Msa1135870:intron 35.0%
! ATTGATTCTGAACCAACATC+AGG + chr7_4:3634857-3634876 None:intergenic 35.0%
CCATTTCTCAAGCAAAGAAA+AGG + chr7_4:3634882-3634901 None:intergenic 35.0%
! CCTTTTCTTTGCTTGAGAAA+TGG - chr7_4:3634879-3634898 Msa1135870:intron 35.0%
!! AGTTGTCCTGAAAAGGTATT+AGG - chr7_4:3634917-3634936 Msa1135870:intron 35.0%
TGTATCTTACTGCAACGTAA+AGG + chr7_4:3635146-3635165 None:intergenic 35.0%
! CACAATTGCAACGATTTTAG+AGG + chr7_4:3635212-3635231 None:intergenic 35.0%
!! CTCTAAAATCGTTGCAATTG+TGG - chr7_4:3635210-3635229 Msa1135870:CDS 35.0%
CAATCTTTGATGTATTGCCT+TGG - chr7_4:3635328-3635347 Msa1135870:five_prime_UTR 35.0%
! AAGGTGTTAAAAAAGGACCA+TGG - chr7_4:3633239-3633258 Msa1135870:three_prime_UTR 35.0%
TATATACAAGAACATGGTCC+TGG - chr7_4:3633292-3633311 Msa1135870:three_prime_UTR 35.0%
AACTATTAACCTGTCTTGGT+TGG + chr7_4:3633334-3633353 None:intergenic 35.0%
TAGGAAAATCATGATCCAAG+AGG - chr7_4:3633441-3633460 Msa1135870:three_prime_UTR 35.0%
CATTATCTGTTCTTTGTGGA+AGG + chr7_4:3634280-3634299 None:intergenic 35.0%
AAGCTCAAGAAATCACAAAC+AGG - chr7_4:3634335-3634354 Msa1135870:intron 35.0%
AAAGAATTCCAAGAGGTCAA+TGG - chr7_4:3634408-3634427 Msa1135870:intron 35.0%
AAGAATTCCAAGAGGTCAAT+GGG - chr7_4:3634409-3634428 Msa1135870:intron 35.0%
! TTTTCTTCCACTAAAGAACC+AGG - chr7_4:3634545-3634564 Msa1135870:intron 35.0%
TAGCTCGTTTACTAAAAGGT+TGG - chr7_4:3634603-3634622 Msa1135870:intron 35.0%
GTACTAACCGATGATTTGAT+TGG + chr7_4:3634638-3634657 None:intergenic 35.0%
AGCAGAATCAAAGTTGTTGA+AGG + chr7_4:3634684-3634703 None:intergenic 35.0%
TTTGATTCTGCTTCTAGTAG+TGG - chr7_4:3634692-3634711 Msa1135870:intron 35.0%
!!! TTTTGAACCTTTGGAGTCTT+TGG - chr7_4:3634760-3634779 Msa1135870:intron 35.0%
! ATTGATTCTGAACCAACATC+AGG + chr7_4:3634857-3634876 None:intergenic 35.0%
CCATTTCTCAAGCAAAGAAA+AGG + chr7_4:3634882-3634901 None:intergenic 35.0%
! CCTTTTCTTTGCTTGAGAAA+TGG - chr7_4:3634879-3634898 Msa1135870:intron 35.0%
!! AGTTGTCCTGAAAAGGTATT+AGG - chr7_4:3634917-3634936 Msa1135870:intron 35.0%
TGTATCTTACTGCAACGTAA+AGG + chr7_4:3635146-3635165 None:intergenic 35.0%
! CACAATTGCAACGATTTTAG+AGG + chr7_4:3635212-3635231 None:intergenic 35.0%
!! CTCTAAAATCGTTGCAATTG+TGG - chr7_4:3635210-3635229 Msa1135870:CDS 35.0%
CAATCTTTGATGTATTGCCT+TGG - chr7_4:3635328-3635347 Msa1135870:five_prime_UTR 35.0%
AAGTGATCATACACTGAGAG+AGG - chr7_4:3633102-3633121 Msa1135870:three_prime_UTR 40.0%
AGTGATCATACACTGAGAGA+GGG - chr7_4:3633103-3633122 Msa1135870:three_prime_UTR 40.0%
AGAGAGGGAGAAGAAGAAAA+AGG - chr7_4:3633118-3633137 Msa1135870:three_prime_UTR 40.0%
ACACCTTCTTTGTCACAACA+AGG + chr7_4:3633226-3633245 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+TGG + chr7_4:3633259-3633278 None:intergenic 40.0%
AAGAACATGGTCCTGGAAAT+TGG - chr7_4:3633299-3633318 Msa1135870:three_prime_UTR 40.0%
ATGATCAACAACAGTCCTCT+TGG + chr7_4:3633459-3633478 None:intergenic 40.0%
GCAAAAGTTGCAGACTTAGA+TGG - chr7_4:3633626-3633645 Msa1135870:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG + chr7_4:3633667-3633686 None:intergenic 40.0%
GCATCTCAAAGAATTCCAAG+AGG - chr7_4:3634401-3634420 Msa1135870:intron 40.0%
! AGATTGACCTGGTTCTTTAG+TGG + chr7_4:3634555-3634574 None:intergenic 40.0%
GCATAGCAAAAAGATTGACC+TGG + chr7_4:3634566-3634585 None:intergenic 40.0%
! TGCTTCTAGTAGTGGAACAA+AGG - chr7_4:3634700-3634719 Msa1135870:intron 40.0%
! GCTTCTAGTAGTGGAACAAA+GGG - chr7_4:3634701-3634720 Msa1135870:intron 40.0%
GATGAAAGTAAGCCTGATGT+TGG - chr7_4:3634842-3634861 Msa1135870:CDS 40.0%
TGAAGCAAGTTGTCCTGAAA+AGG - chr7_4:3634910-3634929 Msa1135870:intron 40.0%
! CCACAACCTAATACCTTTTC+AGG + chr7_4:3634926-3634945 None:intergenic 40.0%
!! CCTGAAAAGGTATTAGGTTG+TGG - chr7_4:3634923-3634942 Msa1135870:intron 40.0%
!! GAAAAGGTATTAGGTTGTGG+TGG - chr7_4:3634926-3634945 Msa1135870:intron 40.0%
! CATGCTCAAGTTTTCTAGAC+TGG - chr7_4:3634953-3634972 Msa1135870:intron 40.0%
ATACTAGCGAAGCTGAAATG+TGG - chr7_4:3635042-3635061 Msa1135870:intron 40.0%
! TTGTGATGATGTTGCTTGCT+TGG - chr7_4:3635065-3635084 Msa1135870:intron 40.0%
!! TGTTGCTTGCTTGGTTCTAA+TGG - chr7_4:3635074-3635093 Msa1135870:intron 40.0%
! CTTGTTTCTCTTCAGTACCA+AGG + chr7_4:3635348-3635367 None:intergenic 40.0%
AAGTGATCATACACTGAGAG+AGG - chr7_4:3633102-3633121 Msa1135870:three_prime_UTR 40.0%
AGTGATCATACACTGAGAGA+GGG - chr7_4:3633103-3633122 Msa1135870:three_prime_UTR 40.0%
AGAGAGGGAGAAGAAGAAAA+AGG - chr7_4:3633118-3633137 Msa1135870:three_prime_UTR 40.0%
ACACCTTCTTTGTCACAACA+AGG + chr7_4:3633226-3633245 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+TGG + chr7_4:3633259-3633278 None:intergenic 40.0%
AAGAACATGGTCCTGGAAAT+TGG - chr7_4:3633299-3633318 Msa1135870:three_prime_UTR 40.0%
ATGATCAACAACAGTCCTCT+TGG + chr7_4:3633459-3633478 None:intergenic 40.0%
GCAAAAGTTGCAGACTTAGA+TGG - chr7_4:3633626-3633645 Msa1135870:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG + chr7_4:3633667-3633686 None:intergenic 40.0%
GCATCTCAAAGAATTCCAAG+AGG - chr7_4:3634401-3634420 Msa1135870:intron 40.0%
! AGATTGACCTGGTTCTTTAG+TGG + chr7_4:3634555-3634574 None:intergenic 40.0%
GCATAGCAAAAAGATTGACC+TGG + chr7_4:3634566-3634585 None:intergenic 40.0%
! TGCTTCTAGTAGTGGAACAA+AGG - chr7_4:3634700-3634719 Msa1135870:intron 40.0%
! GCTTCTAGTAGTGGAACAAA+GGG - chr7_4:3634701-3634720 Msa1135870:intron 40.0%
GATGAAAGTAAGCCTGATGT+TGG - chr7_4:3634842-3634861 Msa1135870:CDS 40.0%
TGAAGCAAGTTGTCCTGAAA+AGG - chr7_4:3634910-3634929 Msa1135870:intron 40.0%
! CCACAACCTAATACCTTTTC+AGG + chr7_4:3634926-3634945 None:intergenic 40.0%
!! CCTGAAAAGGTATTAGGTTG+TGG - chr7_4:3634923-3634942 Msa1135870:intron 40.0%
!! GAAAAGGTATTAGGTTGTGG+TGG - chr7_4:3634926-3634945 Msa1135870:intron 40.0%
! CATGCTCAAGTTTTCTAGAC+TGG - chr7_4:3634953-3634972 Msa1135870:intron 40.0%
ATACTAGCGAAGCTGAAATG+TGG - chr7_4:3635042-3635061 Msa1135870:intron 40.0%
! TTGTGATGATGTTGCTTGCT+TGG - chr7_4:3635065-3635084 Msa1135870:intron 40.0%
!! TGTTGCTTGCTTGGTTCTAA+TGG - chr7_4:3635074-3635093 Msa1135870:intron 40.0%
! CTTGTTTCTCTTCAGTACCA+AGG + chr7_4:3635348-3635367 None:intergenic 40.0%
CCTTCTTTGTCACAACAAGG+TGG + chr7_4:3633223-3633242 None:intergenic 45.0%
! CCACCTTGTTGTGACAAAGA+AGG - chr7_4:3633220-3633239 Msa1135870:three_prime_UTR 45.0%
AACATGGTCCTGGAAATTGG+AGG - chr7_4:3633302-3633321 Msa1135870:three_prime_UTR 45.0%
ACATGGTCCTGGAAATTGGA+GGG - chr7_4:3633303-3633322 Msa1135870:three_prime_UTR 45.0%
TGGACTAATTACCTAAGGCC+AGG - chr7_4:3633646-3633665 Msa1135870:CDS 45.0%
ACCTAAGGCCAGGAATCAAA+AGG - chr7_4:3633656-3633675 Msa1135870:CDS 45.0%
CCTAAGGCCAGGAATCAAAA+GGG - chr7_4:3633657-3633676 Msa1135870:CDS 45.0%
CTAAGGCCAGGAATCAAAAG+GGG - chr7_4:3633658-3633677 Msa1135870:CDS 45.0%
GGGTAACTTCACTGAACAAG+AGG - chr7_4:3633678-3633697 Msa1135870:CDS 45.0%
CTTCTTTCCCATTGACCTCT+TGG + chr7_4:3634419-3634438 None:intergenic 45.0%
GATGACTCCAAAGACTCCAA+AGG + chr7_4:3634770-3634789 None:intergenic 45.0%
ATCTTTGTCACCAGACGCAA+CGG - chr7_4:3634811-3634830 Msa1135870:CDS 45.0%
TCTTGTAAAACCGTTGCGTC+TGG + chr7_4:3634824-3634843 None:intergenic 45.0%
CCTTCTTTGTCACAACAAGG+TGG + chr7_4:3633223-3633242 None:intergenic 45.0%
! CCACCTTGTTGTGACAAAGA+AGG - chr7_4:3633220-3633239 Msa1135870:three_prime_UTR 45.0%
AACATGGTCCTGGAAATTGG+AGG - chr7_4:3633302-3633321 Msa1135870:three_prime_UTR 45.0%
ACATGGTCCTGGAAATTGGA+GGG - chr7_4:3633303-3633322 Msa1135870:three_prime_UTR 45.0%
TGGACTAATTACCTAAGGCC+AGG - chr7_4:3633646-3633665 Msa1135870:CDS 45.0%
ACCTAAGGCCAGGAATCAAA+AGG - chr7_4:3633656-3633675 Msa1135870:CDS 45.0%
CCTAAGGCCAGGAATCAAAA+GGG - chr7_4:3633657-3633676 Msa1135870:CDS 45.0%
CTAAGGCCAGGAATCAAAAG+GGG - chr7_4:3633658-3633677 Msa1135870:CDS 45.0%
GGGTAACTTCACTGAACAAG+AGG - chr7_4:3633678-3633697 Msa1135870:CDS 45.0%
CTTCTTTCCCATTGACCTCT+TGG + chr7_4:3634419-3634438 None:intergenic 45.0%
GATGACTCCAAAGACTCCAA+AGG + chr7_4:3634770-3634789 None:intergenic 45.0%
ATCTTTGTCACCAGACGCAA+CGG - chr7_4:3634811-3634830 Msa1135870:CDS 45.0%
TCTTGTAAAACCGTTGCGTC+TGG + chr7_4:3634824-3634843 None:intergenic 45.0%
!! TTCATTAAAATTATATTTAT+TGG - chr7_4:3633380-3633399 Msa1135870:three_prime_UTR 5.0%
!!! AAATTTAATTTTACAAAAAT+TGG + chr7_4:3633912-3633931 None:intergenic 5.0%
!!! ATTTTTGTAAAATTAAATTT+AGG - chr7_4:3633912-3633931 Msa1135870:CDS 5.0%
!! TTCATTAAAATTATATTTAT+TGG - chr7_4:3633380-3633399 Msa1135870:three_prime_UTR 5.0%
!!! AAATTTAATTTTACAAAAAT+TGG + chr7_4:3633912-3633931 None:intergenic 5.0%
!!! ATTTTTGTAAAATTAAATTT+AGG - chr7_4:3633912-3633931 Msa1135870:CDS 5.0%
!! CCCTTTTGATTCCTGGCCTT+AGG + chr7_4:3633660-3633679 None:intergenic 50.0%
!! CCCTTTTGATTCCTGGCCTT+AGG + chr7_4:3633660-3633679 None:intergenic 50.0%
GGAACAGCCCTCCAATTTCC+AGG + chr7_4:3633313-3633332 None:intergenic 55.0%
AGGGCTGTTCCAACCAAGAC+AGG - chr7_4:3633322-3633341 Msa1135870:three_prime_UTR 55.0%
GGAACAGCCCTCCAATTTCC+AGG + chr7_4:3633313-3633332 None:intergenic 55.0%
AGGGCTGTTCCAACCAAGAC+AGG - chr7_4:3633322-3633341 Msa1135870:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 3633061 3635446 3633061 ID=Msa1135870;Name=Msa1135870
chr7_4 mRNA 3633061 3635446 3633061 ID=Msa1135870-mRNA-1;Parent=Msa1135870;Name=Msa1135870-mRNA-1;_AED=0.00;_eAED=0.00;_QI=150|1|1|1|1|1|3|476|325
chr7_4 exon 3633061 3634251 3633061 ID=Msa1135870-mRNA-1:exon:1050;Parent=Msa1135870-mRNA-1
chr7_4 exon 3634767 3634896 3634767 ID=Msa1135870-mRNA-1:exon:1049;Parent=Msa1135870-mRNA-1
chr7_4 exon 3635164 3635446 3635164 ID=Msa1135870-mRNA-1:exon:1048;Parent=Msa1135870-mRNA-1
chr7_4 five_prime_UTR 3635297 3635446 3635297 ID=Msa1135870-mRNA-1:five_prime_utr;Parent=Msa1135870-mRNA-1
chr7_4 CDS 3635164 3635296 3635164 ID=Msa1135870-mRNA-1:cds;Parent=Msa1135870-mRNA-1
chr7_4 CDS 3634767 3634896 3634767 ID=Msa1135870-mRNA-1:cds;Parent=Msa1135870-mRNA-1
chr7_4 CDS 3633537 3634251 3633537 ID=Msa1135870-mRNA-1:cds;Parent=Msa1135870-mRNA-1
chr7_4 three_prime_UTR 3633061 3633536 3633061 ID=Msa1135870-mRNA-1:three_prime_utr;Parent=Msa1135870-mRNA-1
Gene Sequence

>Msa1135870

ATGGGAAGACCACCTTGTTGTGACAAAGAAGGTGTTAAAAAAGGACCATGGACTCCTGAAGAAGATATCATACTTGTTACTTATATACAAGAACATGGTCCTGGAAATTGGAGGGCTGTTCCAACCAAGACAGGGTTGTCAAGATGCAGCAAAAGTTGCAGACTTAGATGGACTAATTACCTAAGGCCAGGAATCAAAAGGGGTAACTTCACTGAACAAGAGGAGAAGATGATTATCCATCTTCAAGATCTTTTAGGAAATAGATGGGCTGCAATAGCATCATACCTTCCACAAAGAACAGATAATGACATAAAAAACTATTGGAATACTCATTTGAAAAAGAAGCTCAAGAAATCACAAACAGGTAATAATGCTGAATGCATTAATTTTGAAGAAGAAAAATTTTCAGCATCTCAAAGAATTCCAAGAGGTCAATGGGAAAGAAGACTTCAAACAGATATTCAAATGGCCAAAAAAGCACTTAATGAAGCACTTTCACCACAAAAATTATCTTCTAATTTTTCTACTTCAAACCCTACAAATAGTAACTCATTTTCTTCCACTAAAGAACCAGGTCAATCTTTTTGCTATGCTTCAAGTGCAGATAACATAGCTCGTTTACTAAAAGGTTGGATGAAAAATCCAATCAAATCATCGGTTAGTACTAATTCTGCTGTGACACAAAATTCCTTCAACAACTTTGATTCTGCTTCTAGTAGTGGAACAAAGGGTGAAATATTGTCTGAAACATTTGAATCTTTGTTTGGTTTTGAACCTTTGGAGTCTTTGGAGTCATCAAATTCTGAATTCTCTCGTCAATCTTTGTCACCAGACGCAACGGTTTTACAAGATGAAAGTAAGCCTGATGTTGGTTCAGAATCAATGCCCTTTTCTTTGCTTGAGAAATGGCTTCTTGATGAAGCAAGTTGTCCTGAAAAGGTATTAGGTTGTGGTGGTGATCATGCTCAAGTTTTCTAG
Protein sequence

>Msa1135870

MGRPPCCDKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQTGNNAECINFEEEKFSASQRIPRGQWERRLQTDIQMAKKALNEALSPQKLSSNFSTSNPTNSNSFSSTKEPGQSFCYASSADNIARLLKGWMKNPIKSSVSTNSAVTQNSFNNFDSASSSGTKGEILSETFESLFGFEPLESLESSNSEFSRQSLSPDATVLQDESKPDVGSESMPFSLLEKWLLDEASCPEKVLGCGGDHAQVF*