Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380150 | XP_003602964.2 | 90.476 | 231 | 8 | 4 | 27 | 247 | 6 | 232 | 1.01e-141 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380150 | sp|Q9FYR6|SYPM_ARATH | 75.330 | 227 | 45 | 3 | 31 | 247 | 8 | 233 | 3.74e-115 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380150 | G7J5P9 | 90.476 | 231 | 8 | 4 | 27 | 247 | 6 | 232 | 4.83e-142 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002700 | Msa0380150 | 0.805561 | 1.257705e-49 | -8.615850e-47 |
| Msa0011410 | Msa0380150 | 0.805878 | 1.079099e-49 | -8.615850e-47 |
| Msa0021240 | Msa0380150 | 0.803037 | 4.219509e-49 | -8.615850e-47 |
| Msa0021570 | Msa0380150 | 0.806993 | 6.278886e-50 | -8.615850e-47 |
| Msa0035050 | Msa0380150 | 0.863265 | 2.815806e-64 | -8.615850e-47 |
| Msa0037040 | Msa0380150 | 0.834211 | 3.418198e-56 | -8.615850e-47 |
| Msa0037780 | Msa0380150 | 0.817094 | 3.940241e-52 | -8.615850e-47 |
| Msa0039140 | Msa0380150 | 0.806681 | 7.309758e-50 | -8.615850e-47 |
| Msa0042760 | Msa0380150 | 0.800562 | 1.359839e-48 | -8.615850e-47 |
| Msa0042950 | Msa0380150 | 0.839449 | 1.574484e-57 | -8.615850e-47 |
| Msa0046020 | Msa0380150 | 0.822975 | 1.776121e-53 | -8.615850e-47 |
| Msa0052780 | Msa0380150 | -0.801324 | 9.501262e-49 | -8.615850e-47 |
| Msa0066890 | Msa0380150 | 0.868945 | 4.476927e-66 | -8.615850e-47 |
| Msa0067590 | Msa0380150 | 0.809116 | 2.218706e-50 | -8.615850e-47 |
| Msa0069070 | Msa0380150 | 0.814321 | 1.634994e-51 | -8.615850e-47 |
| Msa0069230 | Msa0380150 | 0.801532 | 8.612192e-49 | -8.615850e-47 |
| Msa0074690 | Msa0380150 | -0.800022 | 1.751719e-48 | -8.615850e-47 |
| Msa0079320 | Msa0380150 | 0.802557 | 5.300807e-49 | -8.615850e-47 |
| Msa0081440 | Msa0380150 | 0.826617 | 2.459514e-54 | -8.615850e-47 |
| Msa0091300 | Msa0380150 | 0.841890 | 3.610814e-58 | -8.615850e-47 |
| Msa0094170 | Msa0380150 | 0.837136 | 6.211777e-57 | -8.615850e-47 |
| Msa0095810 | Msa0380150 | 0.809308 | 2.018051e-50 | -8.615850e-47 |
| Msa0097570 | Msa0380150 | -0.804190 | 2.433487e-49 | -8.615850e-47 |
| Msa0099530 | Msa0380150 | 0.805933 | 1.050858e-49 | -8.615850e-47 |
| Msa0112550 | Msa0380150 | 0.802993 | 4.310279e-49 | -8.615850e-47 |
| Msa0112880 | Msa0380150 | 0.837351 | 5.471536e-57 | -8.615850e-47 |
| Msa0116780 | Msa0380150 | 0.805726 | 1.161660e-49 | -8.615850e-47 |
| Msa0127220 | Msa0380150 | 0.805172 | 1.517736e-49 | -8.615850e-47 |
| Msa0136870 | Msa0380150 | 0.849247 | 3.654212e-60 | -8.615850e-47 |
| Msa0141770 | Msa0380150 | 0.810833 | 9.470074e-51 | -8.615850e-47 |
| Msa0145590 | Msa0380150 | 0.807100 | 5.961563e-50 | -8.615850e-47 |
| Msa0148140 | Msa0380150 | 0.803581 | 3.256256e-49 | -8.615850e-47 |
| Msa0151380 | Msa0380150 | 0.810065 | 1.387074e-50 | -8.615850e-47 |
| Msa0154880 | Msa0380150 | 0.855907 | 4.603756e-62 | -8.615850e-47 |
| Msa0154890 | Msa0380150 | 0.836602 | 8.501750e-57 | -8.615850e-47 |
| Msa0163170 | Msa0380150 | 0.805126 | 1.551993e-49 | -8.615850e-47 |
| Msa0173700 | Msa0380150 | 0.843842 | 1.092395e-58 | -8.615850e-47 |
| Msa0177180 | Msa0380150 | 0.803894 | 2.803787e-49 | -8.615850e-47 |
| Msa0178840 | Msa0380150 | 0.831168 | 1.945432e-55 | -8.615850e-47 |
| Msa0187590 | Msa0380150 | 0.802800 | 4.724067e-49 | -8.615850e-47 |
| Msa0195810 | Msa0380150 | 0.802256 | 6.116248e-49 | -8.615850e-47 |
| Msa0195850 | Msa0380150 | 0.804317 | 2.289320e-49 | -8.615850e-47 |
| Msa0225790 | Msa0380150 | 0.830574 | 2.720471e-55 | -8.615850e-47 |
| Msa0237690 | Msa0380150 | 0.800125 | 1.669050e-48 | -8.615850e-47 |
| Msa0368450 | Msa0380150 | 0.807203 | 5.668794e-50 | -8.615850e-47 |
| Msa0371010 | Msa0380150 | 0.806406 | 8.352908e-50 | -8.615850e-47 |
| Msa0373120 | Msa0380150 | 0.816574 | 5.155126e-52 | -8.615850e-47 |
| Msa0380150 | Msa0380270 | 0.805956 | 1.039070e-49 | -8.615850e-47 |
| Msa0380150 | Msa0380450 | 0.804788 | 1.825819e-49 | -8.615850e-47 |
| Msa0380150 | Msa0383870 | 0.820931 | 5.283453e-53 | -8.615850e-47 |
| Msa0380150 | Msa0387630 | 0.800987 | 1.113601e-48 | -8.615850e-47 |
| Msa0380150 | Msa0388790 | 0.826098 | 3.269135e-54 | -8.615850e-47 |
| Msa0380150 | Msa0415160 | 0.830316 | 3.145070e-55 | -8.615850e-47 |
| Msa0380150 | Msa0419150 | 0.816507 | 5.335690e-52 | -8.615850e-47 |
| Msa0380150 | Msa0429490 | 0.853949 | 1.703679e-61 | -8.615850e-47 |
| Msa0380150 | Msa0437820 | 0.820407 | 6.973368e-53 | -8.615850e-47 |
| Msa0380150 | Msa0460170 | 0.809803 | 1.579885e-50 | -8.615850e-47 |
| Msa0380150 | Msa0461620 | 0.801287 | 9.669911e-49 | -8.615850e-47 |
| Msa0380150 | Msa0463030 | 0.807966 | 3.904746e-50 | -8.615850e-47 |
| Msa0380150 | Msa0464980 | 0.816470 | 5.438885e-52 | -8.615850e-47 |
| Msa0380150 | Msa0480090 | 0.817873 | 2.631333e-52 | -8.615850e-47 |
| Msa0380150 | Msa0497140 | 0.801904 | 7.223404e-49 | -8.615850e-47 |
| Msa0380150 | Msa0500610 | 0.802956 | 4.385858e-49 | -8.615850e-47 |
| Msa0380150 | Msa0521260 | 0.800904 | 1.158088e-48 | -8.615850e-47 |
| Msa0380150 | Msa0523420 | 0.812941 | 3.291132e-51 | -8.615850e-47 |
| Msa0380150 | Msa0524470 | 0.805801 | 1.120310e-49 | -8.615850e-47 |
| Msa0380150 | Msa0527420 | 0.802284 | 6.034643e-49 | -8.615850e-47 |
| Msa0380150 | Msa0548650 | 0.824438 | 8.073120e-54 | -8.615850e-47 |
| Msa0380150 | Msa0557440 | 0.806413 | 8.324864e-50 | -8.615850e-47 |
| Msa0380150 | Msa0569580 | 0.835241 | 1.881303e-56 | -8.615850e-47 |
| Msa0380150 | Msa0573940 | 0.819066 | 1.411574e-52 | -8.615850e-47 |
| Msa0380150 | Msa0588110 | 0.816482 | 5.407195e-52 | -8.615850e-47 |
| Msa0380150 | Msa0590620 | 0.820256 | 7.550059e-53 | -8.615850e-47 |
| Msa0380150 | Msa0603690 | 0.810307 | 1.230181e-50 | -8.615850e-47 |
| Msa0380150 | Msa0623470 | 0.850740 | 1.396768e-60 | -8.615850e-47 |
| Msa0380150 | Msa0626920 | -0.824242 | 8.974873e-54 | -8.615850e-47 |
| Msa0380150 | Msa0638010 | 0.816102 | 6.575003e-52 | -8.615850e-47 |
| Msa0380150 | Msa0644760 | 0.833561 | 4.970215e-56 | -8.615850e-47 |
| Msa0380150 | Msa0652220 | 0.808783 | 2.613705e-50 | -8.615850e-47 |
| Msa0380150 | Msa0654400 | 0.800472 | 1.418159e-48 | -8.615850e-47 |
| Msa0380150 | Msa0676570 | 0.827441 | 1.561987e-54 | -8.615850e-47 |
| Msa0380150 | Msa0690100 | 0.811209 | 7.850612e-51 | -8.615850e-47 |
| Msa0380150 | Msa0694800 | 0.820608 | 6.268868e-53 | -8.615850e-47 |
| Msa0380150 | Msa0695470 | 0.814138 | 1.794924e-51 | -8.615850e-47 |
| Msa0380150 | Msa0742370 | 0.804764 | 1.846951e-49 | -8.615850e-47 |
| Msa0380150 | Msa0752490 | 0.853263 | 2.683240e-61 | -8.615850e-47 |
| Msa0380150 | Msa0779450 | 0.820398 | 7.005915e-53 | -8.615850e-47 |
| Msa0380150 | Msa0793130 | 0.826690 | 2.361937e-54 | -8.615850e-47 |
| Msa0380150 | Msa0860630 | 0.812047 | 5.159242e-51 | -8.615850e-47 |
| Msa0380150 | Msa0866060 | 0.831632 | 1.495030e-55 | -8.615850e-47 |
| Msa0380150 | Msa0869320 | 0.818118 | 2.315654e-52 | -8.615850e-47 |
| Msa0380150 | Msa0879940 | 0.802829 | 4.659445e-49 | -8.615850e-47 |
| Msa0380150 | Msa0881530 | 0.812817 | 3.503666e-51 | -8.615850e-47 |
| Msa0380150 | Msa0881880 | 0.831330 | 1.774492e-55 | -8.615850e-47 |
| Msa0380150 | Msa0888460 | 0.801450 | 8.951404e-49 | -8.615850e-47 |
| Msa0380150 | Msa0929440 | 0.804521 | 2.076243e-49 | -8.615850e-47 |
| Msa0380150 | Msa0979020 | 0.800523 | 1.384988e-48 | -8.615850e-47 |
| Msa0380150 | Msa1011140 | 0.825399 | 4.789208e-54 | -8.615850e-47 |
| Msa0380150 | Msa1028860 | 0.803272 | 3.773921e-49 | -8.615850e-47 |
| Msa0380150 | Msa1030960 | 0.802426 | 5.642478e-49 | -8.615850e-47 |
| Msa0380150 | Msa1080610 | 0.810405 | 1.171940e-50 | -8.615850e-47 |
| Msa0380150 | Msa1080680 | 0.812031 | 5.200983e-51 | -8.615850e-47 |
| Msa0380150 | Msa1081520 | 0.810943 | 8.965147e-51 | -8.615850e-47 |
| Msa0380150 | Msa1083620 | 0.836423 | 9.438073e-57 | -8.615850e-47 |
| Msa0380150 | Msa1086510 | 0.811574 | 6.541195e-51 | -8.615850e-47 |
| Msa0380150 | Msa1117770 | 0.800585 | 1.345047e-48 | -8.615850e-47 |
| Msa0380150 | Msa1119420 | 0.801594 | 8.364903e-49 | -8.615850e-47 |
| Msa0380150 | Msa1124990 | 0.801302 | 9.601268e-49 | -8.615850e-47 |
| Msa0380150 | Msa1128610 | 0.816664 | 4.922669e-52 | -8.615850e-47 |
| Msa0380150 | Msa1129300 | 0.808849 | 2.530766e-50 | -8.615850e-47 |
| Msa0380150 | Msa1132900 | 0.822641 | 2.124896e-53 | -8.615850e-47 |
| Msa0380150 | Msa1137190 | 0.813616 | 2.339278e-51 | -8.615850e-47 |
| Msa0380150 | Msa1167150 | 0.812708 | 3.700279e-51 | -8.615850e-47 |
| Msa0380150 | Msa1171640 | 0.802988 | 4.319332e-49 | -8.615850e-47 |
| Msa0380150 | Msa1173150 | -0.804153 | 2.476188e-49 | -8.615850e-47 |
| Msa0380150 | Msa1200060 | 0.836218 | 1.064352e-56 | -8.615850e-47 |
| Msa0380150 | Msa1207660 | 0.801454 | 8.938116e-49 | -8.615850e-47 |
| Msa0380150 | Msa1211930 | 0.806311 | 8.747432e-50 | -8.615850e-47 |
| Msa0380150 | Msa1212150 | 0.809590 | 1.754862e-50 | -8.615850e-47 |
| Msa0380150 | Msa1212210 | 0.803607 | 3.215381e-49 | -8.615850e-47 |
| Msa0380150 | Msa1218310 | 0.841157 | 5.633116e-58 | -8.615850e-47 |
| Msa0380150 | Msa1218350 | 0.838760 | 2.375003e-57 | -8.615850e-47 |
| Msa0380150 | Msa1219530 | 0.836597 | 8.526911e-57 | -8.615850e-47 |
| Msa0380150 | Msa1225240 | 0.802607 | 5.177053e-49 | -8.615850e-47 |
| Msa0380150 | Msa1255480 | 0.857016 | 2.174213e-62 | -8.615850e-47 |
| Msa0380150 | Msa1266750 | 0.803553 | 3.300019e-49 | -8.615850e-47 |
| Msa0380150 | Msa1292060 | 0.836486 | 9.099474e-57 | -8.615850e-47 |
| Msa0380150 | Msa1293040 | 0.811033 | 8.570196e-51 | -8.615850e-47 |
| Msa0380150 | Msa1298170 | 0.809730 | 1.638076e-50 | -8.615850e-47 |
| Msa0380150 | Msa1325560 | 0.807692 | 4.463723e-50 | -8.615850e-47 |
| Msa0380150 | Msa1329080 | 0.830826 | 2.360158e-55 | -8.615850e-47 |
| Msa0380150 | Msa1333220 | 0.833604 | 4.847603e-56 | -8.615850e-47 |
| Msa0380150 | Msa1341710 | 0.802676 | 5.010957e-49 | -8.615850e-47 |
| Msa0380150 | Msa1350130 | 0.808525 | 2.967666e-50 | -8.615850e-47 |
| Msa0380150 | Msa1360070 | 0.828996 | 6.588100e-55 | -8.615850e-47 |
| Msa0380150 | Msa1361580 | 0.801933 | 7.127219e-49 | -8.615850e-47 |
| Msa0380150 | Msa1361670 | 0.822176 | 2.724491e-53 | -8.615850e-47 |
| Msa0380150 | Msa1364350 | 0.817312 | 3.519827e-52 | -8.615850e-47 |
| Msa0380150 | Msa1367560 | 0.804170 | 2.456157e-49 | -8.615850e-47 |
| Msa0380150 | Msa1367690 | 0.805939 | 1.047850e-49 | -8.615850e-47 |
| Msa0380150 | Msa1373420 | 0.826233 | 3.035475e-54 | -8.615850e-47 |
| Msa0380150 | Msa1381340 | 0.811856 | 5.678360e-51 | -8.615850e-47 |
| Msa0380150 | Msa1386910 | 0.810972 | 8.835338e-51 | -8.615850e-47 |
| Msa0380150 | Msa1407160 | 0.821721 | 3.473921e-53 | -8.615850e-47 |
| Msa0380150 | Msa1409360 | 0.835736 | 1.410782e-56 | -8.615850e-47 |
| Msa0380150 | Msa1431510 | 0.816459 | 5.470759e-52 | -8.615850e-47 |
| Msa0380150 | Msa1440990 | 0.813211 | 2.871389e-51 | -8.615850e-47 |
| Msa0380150 | Msa1444130 | 0.800240 | 1.581347e-48 | -8.615850e-47 |
| Msa0380150 | Msa1444690 | 0.802772 | 4.788140e-49 | -8.615850e-47 |
| Msa0380150 | Msa1452230 | 0.842554 | 2.409144e-58 | -8.615850e-47 |
| Msa0380150 | Msa1457390 | 0.823331 | 1.467536e-53 | -8.615850e-47 |
| Msa0380150 | Msa1459130 | 0.811621 | 6.389507e-51 | -8.615850e-47 |
| Msa0380150 | Msa1462210 | 0.813352 | 2.672863e-51 | -8.615850e-47 |
| Msa0260580 | Msa0380150 | 0.838204 | 3.303571e-57 | -8.615850e-47 |
| Msa0260640 | Msa0380150 | 0.829698 | 4.449117e-55 | -8.615850e-47 |
| Msa0261660 | Msa0380150 | 0.804946 | 1.692112e-49 | -8.615850e-47 |
| Msa0267320 | Msa0380150 | 0.816541 | 5.242937e-52 | -8.615850e-47 |
| Msa0275250 | Msa0380150 | 0.825428 | 4.711893e-54 | -8.615850e-47 |
| Msa0275260 | Msa0380150 | 0.805183 | 1.509258e-49 | -8.615850e-47 |
| Msa0288170 | Msa0380150 | 0.809608 | 1.739828e-50 | -8.615850e-47 |
| Msa0297640 | Msa0380150 | 0.805075 | 1.590607e-49 | -8.615850e-47 |
| Msa0310720 | Msa0380150 | 0.804869 | 1.756379e-49 | -8.615850e-47 |
| Msa0310730 | Msa0380150 | 0.800977 | 1.118561e-48 | -8.615850e-47 |
| Msa0315720 | Msa0380150 | 0.818483 | 1.914783e-52 | -8.615850e-47 |
| Msa0315760 | Msa0380150 | 0.800596 | 1.337908e-48 | -8.615850e-47 |
| Msa0326630 | Msa0380150 | 0.858700 | 6.879616e-63 | -8.615850e-47 |
| Msa0329050 | Msa0380150 | 0.808675 | 2.756808e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380150 | MtrunA17_Chr3g0133261 | 90.476 | 231 | 8 | 4 | 27 | 247 | 6 | 232 | 9.30e-146 | 418 |
| Msa0380150 | MtrunA17_Chr7g0270811 | 43.976 | 166 | 84 | 2 | 91 | 247 | 52 | 217 | 1.24e-46 | 162 |
| Msa0380150 | MtrunA17_Chr3g0143341 | 39.766 | 171 | 94 | 2 | 86 | 247 | 6 | 176 | 7.61e-39 | 141 |
| Msa0380150 | MtrunA17_Chr3g0096431 | 38.129 | 139 | 78 | 1 | 86 | 216 | 12 | 150 | 4.65e-32 | 115 |
| Msa0380150 | MtrunA17_Chr3g0143331 | 33.505 | 194 | 79 | 3 | 104 | 247 | 6 | 199 | 3.50e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380150 | AT5G52520.1 | 75.330 | 227 | 45 | 3 | 31 | 247 | 8 | 233 | 3.80e-116 | 343 |
| Msa0380150 | AT3G62120.3 | 42.169 | 166 | 86 | 3 | 91 | 247 | 41 | 205 | 1.34e-42 | 151 |
| Msa0380150 | AT3G62120.2 | 42.169 | 166 | 86 | 3 | 91 | 247 | 54 | 218 | 1.82e-42 | 151 |
| Msa0380150 | AT3G62120.1 | 42.169 | 166 | 86 | 3 | 91 | 247 | 54 | 218 | 1.82e-42 | 151 |
Find 69 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCATTTGGGAAGCCATTC+AGG | 0.220881 | 3_1:+81707952 | Msa0380150:CDS |
| TTAGAACTCTTGAATTTCTT+TGG | 0.246752 | 3_1:+81709553 | Msa0380150:CDS |
| GGCCTCTGCTGCAGTGGTTT+TGG | 0.247674 | 3_1:-81707771 | None:intergenic |
| CGAGTTGTCGACTCGGTCTT+TGG | 0.269239 | 3_1:-81707792 | None:intergenic |
| GTCCCTATGGTTACGCCATT+TGG | 0.281205 | 3_1:+81707939 | Msa0380150:CDS |
| CGGCGGTGGCGGAGAATGAT+TGG | 0.327896 | 3_1:-81707725 | None:intergenic |
| CTTGAATTTCTTTGGCAAGA+AGG | 0.374606 | 3_1:+81709561 | Msa0380150:CDS |
| GGCGGTGGCGGAGAATGATT+GGG | 0.387864 | 3_1:-81707724 | None:intergenic |
| TCTTCCTCTCTTGATTAATC+AGG | 0.388403 | 3_1:+81709390 | Msa0380150:CDS |
| TCCCTATGGTTACGCCATTT+GGG | 0.391559 | 3_1:+81707940 | Msa0380150:CDS |
| TTCACAATGGTTTCACTTGT+AGG | 0.397403 | 3_1:-81709331 | None:intergenic |
| AGTTAGCAGTAGTGACAATT+GGG | 0.403138 | 3_1:+81709107 | Msa0380150:CDS |
| CGGACCGTAATCTGCTAATT+CGG | 0.418329 | 3_1:-81707894 | None:intergenic |
| GAGAAATTGCTGTTGTTGAG+GGG | 0.423329 | 3_1:-81707694 | None:intergenic |
| ATAACCATTGTACCGCGAAC+CGG | 0.425988 | 3_1:-81707914 | None:intergenic |
| AATTCAAGAGTTCTAACAAA+TGG | 0.442257 | 3_1:-81709546 | None:intergenic |
| GAGTTAGCAGTAGTGACAAT+TGG | 0.442737 | 3_1:+81709106 | Msa0380150:CDS |
| TGAGAAATTGCTGTTGTTGA+GGG | 0.442877 | 3_1:-81707695 | None:intergenic |
| AATGTCAAGTTCAAGGAGAC+TGG | 0.459172 | 3_1:+81708075 | Msa0380150:CDS |
| TGAAAGGTTGGTGACGGCGG+TGG | 0.462451 | 3_1:-81707739 | None:intergenic |
| TGGCGGAGAAGGTGAAAGGT+TGG | 0.466244 | 3_1:-81707751 | None:intergenic |
| ACAATGGTTATTCGTCCCTA+TGG | 0.476175 | 3_1:+81707926 | Msa0380150:CDS |
| CTAGGAGTGATGACTCGGTC+AGG | 0.476493 | 3_1:-81707827 | None:intergenic |
| TTATTTGAATGTCAAGTTCA+AGG | 0.486269 | 3_1:+81708068 | Msa0380150:CDS |
| GTCTTTGGCCTCTGCTGCAG+TGG | 0.486813 | 3_1:-81707777 | None:intergenic |
| AAGGTTGGTGACGGCGGTGG+CGG | 0.488368 | 3_1:-81707736 | None:intergenic |
| AACCTGAATGGCTTCCCAAA+TGG | 0.497397 | 3_1:-81707954 | None:intergenic |
| GCAGATTACGGTCCGGTTCG+CGG | 0.498963 | 3_1:+81707902 | Msa0380150:CDS |
| GAAATTGCTGTTGTTGAGGG+GGG | 0.499550 | 3_1:-81707692 | None:intergenic |
| AGAAATTGCTGTTGTTGAGG+GGG | 0.507024 | 3_1:-81707693 | None:intergenic |
| GAGGAAGATCACGGTAGCTA+TGG | 0.509612 | 3_1:-81709375 | None:intergenic |
| AAAGAAGCAAGTCATGTTGA+GGG | 0.511967 | 3_1:+81709073 | Msa0380150:CDS |
| CGCCAAAACCACTGCAGCAG+AGG | 0.513327 | 3_1:+81707769 | Msa0380150:CDS |
| TTCCCAAATGGCGTAACCAT+AGG | 0.529134 | 3_1:-81707942 | None:intergenic |
| AATGCCGAATTAGCAGATTA+CGG | 0.529226 | 3_1:+81707890 | Msa0380150:CDS |
| CTGACCGAGTCATCACTCCT+AGG | 0.534702 | 3_1:+81707828 | Msa0380150:CDS |
| GCATTGAAGTCCTGTGACCT+AGG | 0.538432 | 3_1:-81707845 | None:intergenic |
| TCCAGAAGAGGCAGAAAATG+AGG | 0.539198 | 3_1:+81709602 | Msa0380150:CDS |
| GTAATCTGCTAATTCGGCAT+TGG | 0.539992 | 3_1:-81707888 | None:intergenic |
| TCCCAAATGGCGTAACCATA+GGG | 0.541410 | 3_1:-81707941 | None:intergenic |
| TTGGAGAAGAGTGAAAGAGG+AGG | 0.544001 | 3_1:-81707615 | None:intergenic |
| GAAAGAAGCAAGTCATGTTG+AGG | 0.549877 | 3_1:+81709072 | Msa0380150:intron |
| AGTGGGCAAATGTCACAAGA+TGG | 0.552413 | 3_1:+81709508 | Msa0380150:intron |
| TGCTCATGCAACTCCAGAAG+AGG | 0.559996 | 3_1:+81709590 | Msa0380150:CDS |
| AAATTGCTGTTGTTGAGGGG+GGG | 0.563386 | 3_1:-81707691 | None:intergenic |
| CAATGGTTTCACTTGTAGGT+CGG | 0.569797 | 3_1:-81709327 | None:intergenic |
| GTGGGCAAATGTCACAAGAT+GGG | 0.573271 | 3_1:+81709509 | Msa0380150:intron |
| GTGAGAAATTGCTGTTGTTG+AGG | 0.578924 | 3_1:-81707696 | None:intergenic |
| CGGTCCGGTTCGCGGTACAA+TGG | 0.585347 | 3_1:+81707910 | Msa0380150:CDS |
| TTTACCTGATTAATCAAGAG+AGG | 0.586404 | 3_1:-81709394 | None:intergenic |
| AGTCATCACTCCTAGGTCAC+AGG | 0.587801 | 3_1:+81707835 | Msa0380150:CDS |
| GAGGTAGAGAGAGTGAGATG+AGG | 0.589946 | 3_1:-81707596 | None:intergenic |
| ATTGTCACTACTGCTAACTC+TGG | 0.591910 | 3_1:-81709103 | None:intergenic |
| CGAATTAGCAGATTACGGTC+CGG | 0.596537 | 3_1:+81707895 | Msa0380150:CDS |
| AGAAGGTGAAAGGTTGGTGA+CGG | 0.610314 | 3_1:-81707745 | None:intergenic |
| CTTGAGAGACACCATTTGTG+TGG | 0.613060 | 3_1:-81707641 | None:intergenic |
| GTGACCTAGGAGTGATGACT+CGG | 0.622486 | 3_1:-81707832 | None:intergenic |
| GGCGGAGAATGATTGGGGAA+CGG | 0.627567 | 3_1:-81707718 | None:intergenic |
| AGTAAACATGTGATTCACAA+TGG | 0.630715 | 3_1:-81709344 | None:intergenic |
| TAGGAGTGATGACTCGGTCA+GGG | 0.637146 | 3_1:-81707826 | None:intergenic |
| TGAATCACATGTTTACTCAG+TGG | 0.643424 | 3_1:+81709350 | Msa0380150:CDS |
| AGGTGAAAGGTTGGTGACGG+CGG | 0.643459 | 3_1:-81707742 | None:intergenic |
| GATTCTTCGAGTTGTCGACT+CGG | 0.646760 | 3_1:-81707799 | None:intergenic |
| TAATCAAGAGAGGAAGATCA+CGG | 0.658472 | 3_1:-81709384 | None:intergenic |
| GTTAGCAGTAGTGACAATTG+GGG | 0.660405 | 3_1:+81709108 | Msa0380150:CDS |
| GCGGTGGCGGAGAATGATTG+GGG | 0.684633 | 3_1:-81707723 | None:intergenic |
| GGAACTTGAAGAGAAGCTCG+TGG | 0.700042 | 3_1:+81709138 | Msa0380150:CDS |
| TTAGCAGTAGTGACAATTGG+GGG | 0.717559 | 3_1:+81709109 | Msa0380150:CDS |
| GGTCACAGGACTTCAATGCG+TGG | 0.719791 | 3_1:+81707849 | Msa0380150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATAAATAAATAAA+TGG | - | chr3_1:81708031-81708050 | None:intergenic | 0.0% |
| !! | TAAATAAATAAATAAATAAA+TGG | - | chr3_1:81708031-81708050 | None:intergenic | 0.0% |
| !! | CAAAAAAATTAAAGTAAAAC+AGG | - | chr3_1:81708192-81708211 | None:intergenic | 15.0% |
| !!! | GTGTTATTAAATCAATTATA+TGG | + | chr3_1:81708218-81708237 | Msa0380150:intron | 15.0% |
| !! | CAAAAAAATTAAAGTAAAAC+AGG | - | chr3_1:81708192-81708211 | None:intergenic | 15.0% |
| !!! | GTGTTATTAAATCAATTATA+TGG | + | chr3_1:81708218-81708237 | Msa0380150:intron | 15.0% |
| !!! | TTATTTAGTTTTGTTTGTGT+AGG | + | chr3_1:81708044-81708063 | Msa0380150:intron | 20.0% |
| !! | TTTATCTTGTGTTAAAGAAA+TGG | - | chr3_1:81708304-81708323 | None:intergenic | 20.0% |
| !! | CAACATAATCTTAAGTAAAA+AGG | - | chr3_1:81708743-81708762 | None:intergenic | 20.0% |
| !! | CAAGCGAAATTTAAATTTAA+AGG | - | chr3_1:81708807-81708826 | None:intergenic | 20.0% |
| !!! | GGTAATGAAATTTTATGTTA+TGG | - | chr3_1:81708990-81709009 | None:intergenic | 20.0% |
| !! | AGAAAAACAGTCATAAAAAA+AGG | - | chr3_1:81709180-81709199 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTTCACATATTAT+CGG | + | chr3_1:81709191-81709210 | Msa0380150:intron | 20.0% |
| !!! | TTTGATTTTTCCATTTTTTG+AGG | + | chr3_1:81709293-81709312 | Msa0380150:intron | 20.0% |
| !!! | TTATTTAGTTTTGTTTGTGT+AGG | + | chr3_1:81708044-81708063 | Msa0380150:intron | 20.0% |
| !! | TTTATCTTGTGTTAAAGAAA+TGG | - | chr3_1:81708304-81708323 | None:intergenic | 20.0% |
| !! | CAACATAATCTTAAGTAAAA+AGG | - | chr3_1:81708743-81708762 | None:intergenic | 20.0% |
| !! | CAAGCGAAATTTAAATTTAA+AGG | - | chr3_1:81708807-81708826 | None:intergenic | 20.0% |
| !!! | GGTAATGAAATTTTATGTTA+TGG | - | chr3_1:81708990-81709009 | None:intergenic | 20.0% |
| !! | AGAAAAACAGTCATAAAAAA+AGG | - | chr3_1:81709180-81709199 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTTCACATATTAT+CGG | + | chr3_1:81709191-81709210 | Msa0380150:intron | 20.0% |
| !!! | TTTGATTTTTCCATTTTTTG+AGG | + | chr3_1:81709293-81709312 | Msa0380150:intron | 20.0% |
| ! | AATGGCAAAATGAAAATTGA+AGG | - | chr3_1:81708013-81708032 | None:intergenic | 25.0% |
| ! | TTATTTGAATGTCAAGTTCA+AGG | + | chr3_1:81708068-81708087 | Msa0380150:CDS | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+AGG | - | chr3_1:81708244-81708263 | None:intergenic | 25.0% |
| !!! | ACTTATTTTGCAGCTTATAT+AGG | + | chr3_1:81708258-81708277 | Msa0380150:intron | 25.0% |
| ! | ATTTAAATTTCGCTTGTACT+TGG | + | chr3_1:81708811-81708830 | Msa0380150:intron | 25.0% |
| ! | TTTAAATTTCGCTTGTACTT+GGG | + | chr3_1:81708812-81708831 | Msa0380150:intron | 25.0% |
| ! | TTTGTAGTGTAAGAATATGA+GGG | + | chr3_1:81708922-81708941 | Msa0380150:intron | 25.0% |
| !!! | AAAGTGATATCTTGATAATG+TGG | + | chr3_1:81708951-81708970 | Msa0380150:intron | 25.0% |
| !! | GTTTTTCTTCACATATTATC+GGG | + | chr3_1:81709192-81709211 | Msa0380150:intron | 25.0% |
| ! | AAAATCAAAGACAAAACCTT+AGG | - | chr3_1:81709282-81709301 | None:intergenic | 25.0% |
| !! | AATTCAAGAGTTCTAACAAA+TGG | - | chr3_1:81709549-81709568 | None:intergenic | 25.0% |
| ! | TTAGAACTCTTGAATTTCTT+TGG | + | chr3_1:81709553-81709572 | Msa0380150:CDS | 25.0% |
| ! | AATGGCAAAATGAAAATTGA+AGG | - | chr3_1:81708013-81708032 | None:intergenic | 25.0% |
| ! | TTATTTGAATGTCAAGTTCA+AGG | + | chr3_1:81708068-81708087 | Msa0380150:CDS | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+AGG | - | chr3_1:81708244-81708263 | None:intergenic | 25.0% |
| !!! | ACTTATTTTGCAGCTTATAT+AGG | + | chr3_1:81708258-81708277 | Msa0380150:intron | 25.0% |
| ! | ATTTAAATTTCGCTTGTACT+TGG | + | chr3_1:81708811-81708830 | Msa0380150:intron | 25.0% |
| ! | TTTAAATTTCGCTTGTACTT+GGG | + | chr3_1:81708812-81708831 | Msa0380150:intron | 25.0% |
| ! | TTTGTAGTGTAAGAATATGA+GGG | + | chr3_1:81708922-81708941 | Msa0380150:intron | 25.0% |
| !!! | AAAGTGATATCTTGATAATG+TGG | + | chr3_1:81708951-81708970 | Msa0380150:intron | 25.0% |
| !! | GTTTTTCTTCACATATTATC+GGG | + | chr3_1:81709192-81709211 | Msa0380150:intron | 25.0% |
| ! | AAAATCAAAGACAAAACCTT+AGG | - | chr3_1:81709282-81709301 | None:intergenic | 25.0% |
| !! | AATTCAAGAGTTCTAACAAA+TGG | - | chr3_1:81709549-81709568 | None:intergenic | 25.0% |
| ! | TTAGAACTCTTGAATTTCTT+TGG | + | chr3_1:81709553-81709572 | Msa0380150:CDS | 25.0% |
| AGAAAAAGAATGAACCTGAA+TGG | - | chr3_1:81707969-81707988 | None:intergenic | 30.0% | |
| ! | TAGTAACATGTATTTTCCAC+AGG | + | chr3_1:81708101-81708120 | Msa0380150:CDS | 30.0% |
| TGGTAATTAATGTTTACCTG+TGG | - | chr3_1:81708120-81708139 | None:intergenic | 30.0% | |
| ! | AATCTGCAATTTGTTTGCAT+AGG | + | chr3_1:81708161-81708180 | Msa0380150:intron | 30.0% |
| !! | ATCAATTATATGGCCTTGTT+TGG | + | chr3_1:81708228-81708247 | Msa0380150:intron | 30.0% |
| TAAGCTATCCTAGTGAATTT+AGG | + | chr3_1:81708352-81708371 | Msa0380150:intron | 30.0% | |
| AAGCTATCCTAGTGAATTTA+GGG | + | chr3_1:81708353-81708372 | Msa0380150:intron | 30.0% | |
| CTTATTTCCCTAAATTCACT+AGG | - | chr3_1:81708363-81708382 | None:intergenic | 30.0% | |
| AATATCTGATCTGACACTAT+GGG | - | chr3_1:81708499-81708518 | None:intergenic | 30.0% | |
| AACGTCGAAAAAATTAAGCT+AGG | - | chr3_1:81708522-81708541 | None:intergenic | 30.0% | |
| ACAATAAAAAAAGGGTAACC+CGG | - | chr3_1:81708655-81708674 | None:intergenic | 30.0% | |
| CTACAAACAGTACAAGATAT+AGG | - | chr3_1:81708909-81708928 | None:intergenic | 30.0% | |
| GTTTGTAGTGTAAGAATATG+AGG | + | chr3_1:81708921-81708940 | Msa0380150:intron | 30.0% | |
| TTCTTTCTCTATAAGGAGTA+AGG | - | chr3_1:81709059-81709078 | None:intergenic | 30.0% | |
| AGTAAACATGTGATTCACAA+TGG | - | chr3_1:81709347-81709366 | None:intergenic | 30.0% | |
| TTTACCTGATTAATCAAGAG+AGG | - | chr3_1:81709397-81709416 | None:intergenic | 30.0% | |
| TTCATTCAACAGGAAAAAAC+AGG | - | chr3_1:81709480-81709499 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCCTGTTGAATGAA+CGG | + | chr3_1:81709480-81709499 | Msa0380150:intron | 30.0% |
| !!! | TTTTTTCCTGTTGAATGAAC+GGG | + | chr3_1:81709481-81709500 | Msa0380150:intron | 30.0% |
| AGAAAAAGAATGAACCTGAA+TGG | - | chr3_1:81707969-81707988 | None:intergenic | 30.0% | |
| ! | TAGTAACATGTATTTTCCAC+AGG | + | chr3_1:81708101-81708120 | Msa0380150:CDS | 30.0% |
| TGGTAATTAATGTTTACCTG+TGG | - | chr3_1:81708120-81708139 | None:intergenic | 30.0% | |
| ! | AATCTGCAATTTGTTTGCAT+AGG | + | chr3_1:81708161-81708180 | Msa0380150:intron | 30.0% |
| !! | ATCAATTATATGGCCTTGTT+TGG | + | chr3_1:81708228-81708247 | Msa0380150:intron | 30.0% |
| TAAGCTATCCTAGTGAATTT+AGG | + | chr3_1:81708352-81708371 | Msa0380150:intron | 30.0% | |
| AAGCTATCCTAGTGAATTTA+GGG | + | chr3_1:81708353-81708372 | Msa0380150:intron | 30.0% | |
| CTTATTTCCCTAAATTCACT+AGG | - | chr3_1:81708363-81708382 | None:intergenic | 30.0% | |
| AATATCTGATCTGACACTAT+GGG | - | chr3_1:81708499-81708518 | None:intergenic | 30.0% | |
| AACGTCGAAAAAATTAAGCT+AGG | - | chr3_1:81708522-81708541 | None:intergenic | 30.0% | |
| ACAATAAAAAAAGGGTAACC+CGG | - | chr3_1:81708655-81708674 | None:intergenic | 30.0% | |
| CTACAAACAGTACAAGATAT+AGG | - | chr3_1:81708909-81708928 | None:intergenic | 30.0% | |
| GTTTGTAGTGTAAGAATATG+AGG | + | chr3_1:81708921-81708940 | Msa0380150:intron | 30.0% | |
| TTCTTTCTCTATAAGGAGTA+AGG | - | chr3_1:81709059-81709078 | None:intergenic | 30.0% | |
| AGTAAACATGTGATTCACAA+TGG | - | chr3_1:81709347-81709366 | None:intergenic | 30.0% | |
| TTTACCTGATTAATCAAGAG+AGG | - | chr3_1:81709397-81709416 | None:intergenic | 30.0% | |
| TTCATTCAACAGGAAAAAAC+AGG | - | chr3_1:81709480-81709499 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCCTGTTGAATGAA+CGG | + | chr3_1:81709480-81709499 | Msa0380150:intron | 30.0% |
| !!! | TTTTTTCCTGTTGAATGAAC+GGG | + | chr3_1:81709481-81709500 | Msa0380150:intron | 30.0% |
| !! | TTTTTGGAGAAGAGTGAAAG+AGG | - | chr3_1:81707621-81707640 | None:intergenic | 35.0% |
| TTCTCCAAAAACCACACAAA+TGG | + | chr3_1:81707630-81707649 | Msa0380150:CDS | 35.0% | |
| ! | TGAGAAATTGCTGTTGTTGA+GGG | - | chr3_1:81707698-81707717 | None:intergenic | 35.0% |
| AATGCCGAATTAGCAGATTA+CGG | + | chr3_1:81707890-81707909 | Msa0380150:CDS | 35.0% | |
| GAATATCTGATCTGACACTA+TGG | - | chr3_1:81708500-81708519 | None:intergenic | 35.0% | |
| TTAAGGCTGCTTGTAAAAAC+AGG | + | chr3_1:81708557-81708576 | Msa0380150:intron | 35.0% | |
| TAAGGCTGCTTGTAAAAACA+GGG | + | chr3_1:81708558-81708577 | Msa0380150:intron | 35.0% | |
| !! | GAAGGCATCAAACAAATGAT+GGG | - | chr3_1:81709011-81709030 | None:intergenic | 35.0% |
| !! | AGAAGGCATCAAACAAATGA+TGG | - | chr3_1:81709012-81709031 | None:intergenic | 35.0% |
| ! | GACTTGCTTCTTTCTCTATA+AGG | - | chr3_1:81709066-81709085 | None:intergenic | 35.0% |
| AAAGAAGCAAGTCATGTTGA+GGG | + | chr3_1:81709073-81709092 | Msa0380150:CDS | 35.0% | |
| AGTTAGCAGTAGTGACAATT+GGG | + | chr3_1:81709107-81709126 | Msa0380150:CDS | 35.0% | |
| !!! | TTTTCCATTTTTTGAGGCTG+TGG | + | chr3_1:81709299-81709318 | Msa0380150:intron | 35.0% |
| TTCACAATGGTTTCACTTGT+AGG | - | chr3_1:81709334-81709353 | None:intergenic | 35.0% | |
| TGAATCACATGTTTACTCAG+TGG | + | chr3_1:81709350-81709369 | Msa0380150:CDS | 35.0% | |
| TAATCAAGAGAGGAAGATCA+CGG | - | chr3_1:81709387-81709406 | None:intergenic | 35.0% | |
| TCTTCCTCTCTTGATTAATC+AGG | + | chr3_1:81709390-81709409 | Msa0380150:CDS | 35.0% | |
| ! | TTTTGCTTACAAACGAAACC+AGG | - | chr3_1:81709426-81709445 | None:intergenic | 35.0% |
| CTTGAATTTCTTTGGCAAGA+AGG | + | chr3_1:81709561-81709580 | Msa0380150:CDS | 35.0% | |
| !! | TTTTTGGAGAAGAGTGAAAG+AGG | - | chr3_1:81707621-81707640 | None:intergenic | 35.0% |
| TTCTCCAAAAACCACACAAA+TGG | + | chr3_1:81707630-81707649 | Msa0380150:CDS | 35.0% | |
| ! | TGAGAAATTGCTGTTGTTGA+GGG | - | chr3_1:81707698-81707717 | None:intergenic | 35.0% |
| AATGCCGAATTAGCAGATTA+CGG | + | chr3_1:81707890-81707909 | Msa0380150:CDS | 35.0% | |
| GAATATCTGATCTGACACTA+TGG | - | chr3_1:81708500-81708519 | None:intergenic | 35.0% | |
| TTAAGGCTGCTTGTAAAAAC+AGG | + | chr3_1:81708557-81708576 | Msa0380150:intron | 35.0% | |
| TAAGGCTGCTTGTAAAAACA+GGG | + | chr3_1:81708558-81708577 | Msa0380150:intron | 35.0% | |
| !! | GAAGGCATCAAACAAATGAT+GGG | - | chr3_1:81709011-81709030 | None:intergenic | 35.0% |
| !! | AGAAGGCATCAAACAAATGA+TGG | - | chr3_1:81709012-81709031 | None:intergenic | 35.0% |
| ! | GACTTGCTTCTTTCTCTATA+AGG | - | chr3_1:81709066-81709085 | None:intergenic | 35.0% |
| AAAGAAGCAAGTCATGTTGA+GGG | + | chr3_1:81709073-81709092 | Msa0380150:CDS | 35.0% | |
| AGTTAGCAGTAGTGACAATT+GGG | + | chr3_1:81709107-81709126 | Msa0380150:CDS | 35.0% | |
| !!! | TTTTCCATTTTTTGAGGCTG+TGG | + | chr3_1:81709299-81709318 | Msa0380150:intron | 35.0% |
| TTCACAATGGTTTCACTTGT+AGG | - | chr3_1:81709334-81709353 | None:intergenic | 35.0% | |
| TGAATCACATGTTTACTCAG+TGG | + | chr3_1:81709350-81709369 | Msa0380150:CDS | 35.0% | |
| TAATCAAGAGAGGAAGATCA+CGG | - | chr3_1:81709387-81709406 | None:intergenic | 35.0% | |
| TCTTCCTCTCTTGATTAATC+AGG | + | chr3_1:81709390-81709409 | Msa0380150:CDS | 35.0% | |
| ! | TTTTGCTTACAAACGAAACC+AGG | - | chr3_1:81709426-81709445 | None:intergenic | 35.0% |
| CTTGAATTTCTTTGGCAAGA+AGG | + | chr3_1:81709561-81709580 | Msa0380150:CDS | 35.0% | |
| ! | GACACCATTTGTGTGGTTTT+TGG | - | chr3_1:81707637-81707656 | None:intergenic | 40.0% |
| ! | AGAAATTGCTGTTGTTGAGG+GGG | - | chr3_1:81707696-81707715 | None:intergenic | 40.0% |
| ! | GAGAAATTGCTGTTGTTGAG+GGG | - | chr3_1:81707697-81707716 | None:intergenic | 40.0% |
| ! | GTGAGAAATTGCTGTTGTTG+AGG | - | chr3_1:81707699-81707718 | None:intergenic | 40.0% |
| GTAATCTGCTAATTCGGCAT+TGG | - | chr3_1:81707891-81707910 | None:intergenic | 40.0% | |
| ACAATGGTTATTCGTCCCTA+TGG | + | chr3_1:81707926-81707945 | Msa0380150:CDS | 40.0% | |
| AATGTCAAGTTCAAGGAGAC+TGG | + | chr3_1:81708075-81708094 | Msa0380150:CDS | 40.0% | |
| ! | CTGCAATTTGTTTGCATAGG+AGG | + | chr3_1:81708164-81708183 | Msa0380150:intron | 40.0% |
| CTGCTTGTAAAAACAGGGTA+AGG | + | chr3_1:81708563-81708582 | Msa0380150:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr3_1:81708589-81708608 | Msa0380150:intron | 40.0% | |
| ACAGTACAAGATATAGGCAC+AGG | - | chr3_1:81708903-81708922 | None:intergenic | 40.0% | |
| TGCAGAACAGATTTGAGAGA+AGG | - | chr3_1:81709029-81709048 | None:intergenic | 40.0% | |
| GAAAGAAGCAAGTCATGTTG+AGG | + | chr3_1:81709072-81709091 | Msa0380150:intron | 40.0% | |
| ATTGTCACTACTGCTAACTC+TGG | - | chr3_1:81709106-81709125 | None:intergenic | 40.0% | |
| GAGTTAGCAGTAGTGACAAT+TGG | + | chr3_1:81709106-81709125 | Msa0380150:CDS | 40.0% | |
| GTTAGCAGTAGTGACAATTG+GGG | + | chr3_1:81709108-81709127 | Msa0380150:CDS | 40.0% | |
| TTAGCAGTAGTGACAATTGG+GGG | + | chr3_1:81709109-81709128 | Msa0380150:CDS | 40.0% | |
| CAATGGTTTCACTTGTAGGT+CGG | - | chr3_1:81709330-81709349 | None:intergenic | 40.0% | |
| TAATCAGGTAAACGATGTCC+TGG | + | chr3_1:81709405-81709424 | Msa0380150:intron | 40.0% | |
| ! | GACACCATTTGTGTGGTTTT+TGG | - | chr3_1:81707637-81707656 | None:intergenic | 40.0% |
| ! | AGAAATTGCTGTTGTTGAGG+GGG | - | chr3_1:81707696-81707715 | None:intergenic | 40.0% |
| ! | GAGAAATTGCTGTTGTTGAG+GGG | - | chr3_1:81707697-81707716 | None:intergenic | 40.0% |
| ! | GTGAGAAATTGCTGTTGTTG+AGG | - | chr3_1:81707699-81707718 | None:intergenic | 40.0% |
| GTAATCTGCTAATTCGGCAT+TGG | - | chr3_1:81707891-81707910 | None:intergenic | 40.0% | |
| ACAATGGTTATTCGTCCCTA+TGG | + | chr3_1:81707926-81707945 | Msa0380150:CDS | 40.0% | |
| AATGTCAAGTTCAAGGAGAC+TGG | + | chr3_1:81708075-81708094 | Msa0380150:CDS | 40.0% | |
| ! | CTGCAATTTGTTTGCATAGG+AGG | + | chr3_1:81708164-81708183 | Msa0380150:intron | 40.0% |
| CTGCTTGTAAAAACAGGGTA+AGG | + | chr3_1:81708563-81708582 | Msa0380150:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr3_1:81708589-81708608 | Msa0380150:intron | 40.0% | |
| ACAGTACAAGATATAGGCAC+AGG | - | chr3_1:81708903-81708922 | None:intergenic | 40.0% | |
| TGCAGAACAGATTTGAGAGA+AGG | - | chr3_1:81709029-81709048 | None:intergenic | 40.0% | |
| GAAAGAAGCAAGTCATGTTG+AGG | + | chr3_1:81709072-81709091 | Msa0380150:intron | 40.0% | |
| ATTGTCACTACTGCTAACTC+TGG | - | chr3_1:81709106-81709125 | None:intergenic | 40.0% | |
| GAGTTAGCAGTAGTGACAAT+TGG | + | chr3_1:81709106-81709125 | Msa0380150:CDS | 40.0% | |
| GTTAGCAGTAGTGACAATTG+GGG | + | chr3_1:81709108-81709127 | Msa0380150:CDS | 40.0% | |
| TTAGCAGTAGTGACAATTGG+GGG | + | chr3_1:81709109-81709128 | Msa0380150:CDS | 40.0% | |
| CAATGGTTTCACTTGTAGGT+CGG | - | chr3_1:81709330-81709349 | None:intergenic | 40.0% | |
| TAATCAGGTAAACGATGTCC+TGG | + | chr3_1:81709405-81709424 | Msa0380150:intron | 40.0% | |
| TTGGAGAAGAGTGAAAGAGG+AGG | - | chr3_1:81707618-81707637 | None:intergenic | 45.0% | |
| CTTGAGAGACACCATTTGTG+TGG | - | chr3_1:81707644-81707663 | None:intergenic | 45.0% | |
| ! | AAATTGCTGTTGTTGAGGGG+GGG | - | chr3_1:81707694-81707713 | None:intergenic | 45.0% |
| ! | GAAATTGCTGTTGTTGAGGG+GGG | - | chr3_1:81707695-81707714 | None:intergenic | 45.0% |
| !! | AGAAGGTGAAAGGTTGGTGA+CGG | - | chr3_1:81707748-81707767 | None:intergenic | 45.0% |
| !! | GATTCTTCGAGTTGTCGACT+CGG | - | chr3_1:81707802-81707821 | None:intergenic | 45.0% |
| CGGACCGTAATCTGCTAATT+CGG | - | chr3_1:81707897-81707916 | None:intergenic | 45.0% | |
| CGAATTAGCAGATTACGGTC+CGG | + | chr3_1:81707895-81707914 | Msa0380150:CDS | 45.0% | |
| ATAACCATTGTACCGCGAAC+CGG | - | chr3_1:81707917-81707936 | None:intergenic | 45.0% | |
| TCCCTATGGTTACGCCATTT+GGG | + | chr3_1:81707940-81707959 | Msa0380150:CDS | 45.0% | |
| TCCCAAATGGCGTAACCATA+GGG | - | chr3_1:81707944-81707963 | None:intergenic | 45.0% | |
| TTCCCAAATGGCGTAACCAT+AGG | - | chr3_1:81707945-81707964 | None:intergenic | 45.0% | |
| AACCTGAATGGCTTCCCAAA+TGG | - | chr3_1:81707957-81707976 | None:intergenic | 45.0% | |
| AAGCACTTGCGACACTGTTT+GGG | - | chr3_1:81708437-81708456 | None:intergenic | 45.0% | |
| TAAGCACTTGCGACACTGTT+TGG | - | chr3_1:81708438-81708457 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr3_1:81708585-81708604 | Msa0380150:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr3_1:81708588-81708607 | Msa0380150:intron | 45.0% | |
| CGTTGAAAAGCTGTGACCTA+AGG | + | chr3_1:81709263-81709282 | Msa0380150:intron | 45.0% | |
| ! | TTGAATGAACGGGCTTCAGT+GGG | + | chr3_1:81709491-81709510 | Msa0380150:intron | 45.0% |
| AGTGGGCAAATGTCACAAGA+TGG | + | chr3_1:81709508-81709527 | Msa0380150:intron | 45.0% | |
| GTGGGCAAATGTCACAAGAT+GGG | + | chr3_1:81709509-81709528 | Msa0380150:intron | 45.0% | |
| TTGGAGAAGAGTGAAAGAGG+AGG | - | chr3_1:81707618-81707637 | None:intergenic | 45.0% | |
| CTTGAGAGACACCATTTGTG+TGG | - | chr3_1:81707644-81707663 | None:intergenic | 45.0% | |
| ! | AAATTGCTGTTGTTGAGGGG+GGG | - | chr3_1:81707694-81707713 | None:intergenic | 45.0% |
| ! | GAAATTGCTGTTGTTGAGGG+GGG | - | chr3_1:81707695-81707714 | None:intergenic | 45.0% |
| !! | AGAAGGTGAAAGGTTGGTGA+CGG | - | chr3_1:81707748-81707767 | None:intergenic | 45.0% |
| !! | GATTCTTCGAGTTGTCGACT+CGG | - | chr3_1:81707802-81707821 | None:intergenic | 45.0% |
| CGGACCGTAATCTGCTAATT+CGG | - | chr3_1:81707897-81707916 | None:intergenic | 45.0% | |
| CGAATTAGCAGATTACGGTC+CGG | + | chr3_1:81707895-81707914 | Msa0380150:CDS | 45.0% | |
| ATAACCATTGTACCGCGAAC+CGG | - | chr3_1:81707917-81707936 | None:intergenic | 45.0% | |
| TCCCTATGGTTACGCCATTT+GGG | + | chr3_1:81707940-81707959 | Msa0380150:CDS | 45.0% | |
| TCCCAAATGGCGTAACCATA+GGG | - | chr3_1:81707944-81707963 | None:intergenic | 45.0% | |
| TTCCCAAATGGCGTAACCAT+AGG | - | chr3_1:81707945-81707964 | None:intergenic | 45.0% | |
| AACCTGAATGGCTTCCCAAA+TGG | - | chr3_1:81707957-81707976 | None:intergenic | 45.0% | |
| AAGCACTTGCGACACTGTTT+GGG | - | chr3_1:81708437-81708456 | None:intergenic | 45.0% | |
| TAAGCACTTGCGACACTGTT+TGG | - | chr3_1:81708438-81708457 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr3_1:81708585-81708604 | Msa0380150:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr3_1:81708588-81708607 | Msa0380150:intron | 45.0% | |
| CGTTGAAAAGCTGTGACCTA+AGG | + | chr3_1:81709263-81709282 | Msa0380150:intron | 45.0% | |
| ! | TTGAATGAACGGGCTTCAGT+GGG | + | chr3_1:81709491-81709510 | Msa0380150:intron | 45.0% |
| AGTGGGCAAATGTCACAAGA+TGG | + | chr3_1:81709508-81709527 | Msa0380150:intron | 45.0% | |
| GTGGGCAAATGTCACAAGAT+GGG | + | chr3_1:81709509-81709528 | Msa0380150:intron | 45.0% | |
| !! | TATATATAATTAATTAAGTT+TGG | - | chr3_1:81708140-81708159 | None:intergenic | 5.0% |
| !! | TTTATTGTTATATAAATTTA+AGG | + | chr3_1:81708540-81708559 | Msa0380150:intron | 5.0% |
| !! | TTTATATAACAATAAAAAAA+GGG | - | chr3_1:81708663-81708682 | None:intergenic | 5.0% |
| !! | ATTTATATAACAATAAAAAA+AGG | - | chr3_1:81708664-81708683 | None:intergenic | 5.0% |
| !! | TATATATAATTAATTAAGTT+TGG | - | chr3_1:81708140-81708159 | None:intergenic | 5.0% |
| !! | TTTATTGTTATATAAATTTA+AGG | + | chr3_1:81708540-81708559 | Msa0380150:intron | 5.0% |
| !! | TTTATATAACAATAAAAAAA+GGG | - | chr3_1:81708663-81708682 | None:intergenic | 5.0% |
| !! | ATTTATATAACAATAAAAAA+AGG | - | chr3_1:81708664-81708683 | None:intergenic | 5.0% |
| GAGGTAGAGAGAGTGAGATG+AGG | - | chr3_1:81707599-81707618 | None:intergenic | 50.0% | |
| !! | GTTTTGGCGGAGAAGGTGAA+AGG | - | chr3_1:81707758-81707777 | None:intergenic | 50.0% |
| !! | TAGGAGTGATGACTCGGTCA+GGG | - | chr3_1:81707829-81707848 | None:intergenic | 50.0% |
| GTGACCTAGGAGTGATGACT+CGG | - | chr3_1:81707835-81707854 | None:intergenic | 50.0% | |
| AGTCATCACTCCTAGGTCAC+AGG | + | chr3_1:81707835-81707854 | Msa0380150:CDS | 50.0% | |
| GCATTGAAGTCCTGTGACCT+AGG | - | chr3_1:81707848-81707867 | None:intergenic | 50.0% | |
| GTCCCTATGGTTACGCCATT+TGG | + | chr3_1:81707939-81707958 | Msa0380150:CDS | 50.0% | |
| !! | TCTGACACTATGGGCTGGTT+TGG | - | chr3_1:81708490-81708509 | None:intergenic | 50.0% |
| TCTGATCTGACACTATGGGC+TGG | - | chr3_1:81708495-81708514 | None:intergenic | 50.0% | |
| CTAAAGCTCCCTCATACGCA+GGG | - | chr3_1:81708628-81708647 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCTCATACGC+AGG | - | chr3_1:81708629-81708648 | None:intergenic | 50.0% | |
| ! | ATGAGGGAGCTTTAGTGCAC+CGG | + | chr3_1:81708633-81708652 | Msa0380150:intron | 50.0% |
| !! | CGCTTGTACTTGGGTTAGTG+CGG | + | chr3_1:81708821-81708840 | Msa0380150:intron | 50.0% |
| AGTGACAATTGGGGGTGGAA+AGG | + | chr3_1:81709117-81709136 | Msa0380150:CDS | 50.0% | |
| GGAACTTGAAGAGAAGCTCG+TGG | + | chr3_1:81709138-81709157 | Msa0380150:CDS | 50.0% | |
| CCTGCCACAGCCTCAAAAAA+TGG | - | chr3_1:81709306-81709325 | None:intergenic | 50.0% | |
| !!! | CCATTTTTTGAGGCTGTGGC+AGG | + | chr3_1:81709303-81709322 | Msa0380150:intron | 50.0% |
| GAGGAAGATCACGGTAGCTA+TGG | - | chr3_1:81709378-81709397 | None:intergenic | 50.0% | |
| CTGAAGCCCGTTCATTCAAC+AGG | - | chr3_1:81709490-81709509 | None:intergenic | 50.0% | |
| ! | GTTGAATGAACGGGCTTCAG+TGG | + | chr3_1:81709490-81709509 | Msa0380150:intron | 50.0% |
| TGCTCATGCAACTCCAGAAG+AGG | + | chr3_1:81709590-81709609 | Msa0380150:CDS | 50.0% | |
| GAGGTAGAGAGAGTGAGATG+AGG | - | chr3_1:81707599-81707618 | None:intergenic | 50.0% | |
| !! | GTTTTGGCGGAGAAGGTGAA+AGG | - | chr3_1:81707758-81707777 | None:intergenic | 50.0% |
| !! | TAGGAGTGATGACTCGGTCA+GGG | - | chr3_1:81707829-81707848 | None:intergenic | 50.0% |
| GTGACCTAGGAGTGATGACT+CGG | - | chr3_1:81707835-81707854 | None:intergenic | 50.0% | |
| AGTCATCACTCCTAGGTCAC+AGG | + | chr3_1:81707835-81707854 | Msa0380150:CDS | 50.0% | |
| GCATTGAAGTCCTGTGACCT+AGG | - | chr3_1:81707848-81707867 | None:intergenic | 50.0% | |
| GTCCCTATGGTTACGCCATT+TGG | + | chr3_1:81707939-81707958 | Msa0380150:CDS | 50.0% | |
| !! | TCTGACACTATGGGCTGGTT+TGG | - | chr3_1:81708490-81708509 | None:intergenic | 50.0% |
| TCTGATCTGACACTATGGGC+TGG | - | chr3_1:81708495-81708514 | None:intergenic | 50.0% | |
| CTAAAGCTCCCTCATACGCA+GGG | - | chr3_1:81708628-81708647 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCTCATACGC+AGG | - | chr3_1:81708629-81708648 | None:intergenic | 50.0% | |
| ! | ATGAGGGAGCTTTAGTGCAC+CGG | + | chr3_1:81708633-81708652 | Msa0380150:intron | 50.0% |
| !! | CGCTTGTACTTGGGTTAGTG+CGG | + | chr3_1:81708821-81708840 | Msa0380150:intron | 50.0% |
| AGTGACAATTGGGGGTGGAA+AGG | + | chr3_1:81709117-81709136 | Msa0380150:CDS | 50.0% | |
| GGAACTTGAAGAGAAGCTCG+TGG | + | chr3_1:81709138-81709157 | Msa0380150:CDS | 50.0% | |
| CCTGCCACAGCCTCAAAAAA+TGG | - | chr3_1:81709306-81709325 | None:intergenic | 50.0% | |
| !!! | CCATTTTTTGAGGCTGTGGC+AGG | + | chr3_1:81709303-81709322 | Msa0380150:intron | 50.0% |
| GAGGAAGATCACGGTAGCTA+TGG | - | chr3_1:81709378-81709397 | None:intergenic | 50.0% | |
| CTGAAGCCCGTTCATTCAAC+AGG | - | chr3_1:81709490-81709509 | None:intergenic | 50.0% | |
| ! | GTTGAATGAACGGGCTTCAG+TGG | + | chr3_1:81709490-81709509 | Msa0380150:intron | 50.0% |
| TGCTCATGCAACTCCAGAAG+AGG | + | chr3_1:81709590-81709609 | Msa0380150:CDS | 50.0% | |
| GGCGGAGAATGATTGGGGAA+CGG | - | chr3_1:81707721-81707740 | None:intergenic | 55.0% | |
| !! | AGGTGAAAGGTTGGTGACGG+CGG | - | chr3_1:81707745-81707764 | None:intergenic | 55.0% |
| TGGCGGAGAAGGTGAAAGGT+TGG | - | chr3_1:81707754-81707773 | None:intergenic | 55.0% | |
| !!! | TGCAGTGGTTTTGGCGGAGA+AGG | - | chr3_1:81707765-81707784 | None:intergenic | 55.0% |
| !!! | CTCTGCTGCAGTGGTTTTGG+CGG | - | chr3_1:81707771-81707790 | None:intergenic | 55.0% |
| !! | CGAGTTGTCGACTCGGTCTT+TGG | - | chr3_1:81707795-81707814 | None:intergenic | 55.0% |
| !! | CTAGGAGTGATGACTCGGTC+AGG | - | chr3_1:81707830-81707849 | None:intergenic | 55.0% |
| CTGACCGAGTCATCACTCCT+AGG | + | chr3_1:81707828-81707847 | Msa0380150:CDS | 55.0% | |
| GGTCACAGGACTTCAATGCG+TGG | + | chr3_1:81707849-81707868 | Msa0380150:CDS | 55.0% | |
| CGCCATTTGGGAAGCCATTC+AGG | + | chr3_1:81707952-81707971 | Msa0380150:CDS | 55.0% | |
| ! | TGAGGGAGCTTTAGTGCACC+GGG | + | chr3_1:81708634-81708653 | Msa0380150:intron | 55.0% |
| GCAGTAGTGACAATTGGGGG+TGG | + | chr3_1:81709112-81709131 | Msa0380150:CDS | 55.0% | |
| GGCGGAGAATGATTGGGGAA+CGG | - | chr3_1:81707721-81707740 | None:intergenic | 55.0% | |
| !! | AGGTGAAAGGTTGGTGACGG+CGG | - | chr3_1:81707745-81707764 | None:intergenic | 55.0% |
| TGGCGGAGAAGGTGAAAGGT+TGG | - | chr3_1:81707754-81707773 | None:intergenic | 55.0% | |
| !!! | TGCAGTGGTTTTGGCGGAGA+AGG | - | chr3_1:81707765-81707784 | None:intergenic | 55.0% |
| !!! | CTCTGCTGCAGTGGTTTTGG+CGG | - | chr3_1:81707771-81707790 | None:intergenic | 55.0% |
| !! | CGAGTTGTCGACTCGGTCTT+TGG | - | chr3_1:81707795-81707814 | None:intergenic | 55.0% |
| !! | CTAGGAGTGATGACTCGGTC+AGG | - | chr3_1:81707830-81707849 | None:intergenic | 55.0% |
| CTGACCGAGTCATCACTCCT+AGG | + | chr3_1:81707828-81707847 | Msa0380150:CDS | 55.0% | |
| GGTCACAGGACTTCAATGCG+TGG | + | chr3_1:81707849-81707868 | Msa0380150:CDS | 55.0% | |
| CGCCATTTGGGAAGCCATTC+AGG | + | chr3_1:81707952-81707971 | Msa0380150:CDS | 55.0% | |
| ! | TGAGGGAGCTTTAGTGCACC+GGG | + | chr3_1:81708634-81708653 | Msa0380150:intron | 55.0% |
| GCAGTAGTGACAATTGGGGG+TGG | + | chr3_1:81709112-81709131 | Msa0380150:CDS | 55.0% | |
| TGTTGAGGGGGGGAGAGAAG+AGG | - | chr3_1:81707684-81707703 | None:intergenic | 60.0% | |
| !! | GCGGTGGCGGAGAATGATTG+GGG | - | chr3_1:81707726-81707745 | None:intergenic | 60.0% |
| !! | GGCGGTGGCGGAGAATGATT+GGG | - | chr3_1:81707727-81707746 | None:intergenic | 60.0% |
| !! | TGAAAGGTTGGTGACGGCGG+TGG | - | chr3_1:81707742-81707761 | None:intergenic | 60.0% |
| CGCCAAAACCACTGCAGCAG+AGG | + | chr3_1:81707769-81707788 | Msa0380150:CDS | 60.0% | |
| ! | GGCCTCTGCTGCAGTGGTTT+TGG | - | chr3_1:81707774-81707793 | None:intergenic | 60.0% |
| GTCTTTGGCCTCTGCTGCAG+TGG | - | chr3_1:81707780-81707799 | None:intergenic | 60.0% | |
| ! | GCAGATTACGGTCCGGTTCG+CGG | + | chr3_1:81707902-81707921 | Msa0380150:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3_1:81708601-81708620 | Msa0380150:intron | 60.0% |
| TCATACGCAGGGTCCGGGAA+GGG | - | chr3_1:81708617-81708636 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCGTATGA+GGG | + | chr3_1:81708617-81708636 | Msa0380150:intron | 60.0% | |
| TGTTGAGGGGGGGAGAGAAG+AGG | - | chr3_1:81707684-81707703 | None:intergenic | 60.0% | |
| !! | GCGGTGGCGGAGAATGATTG+GGG | - | chr3_1:81707726-81707745 | None:intergenic | 60.0% |
| !! | GGCGGTGGCGGAGAATGATT+GGG | - | chr3_1:81707727-81707746 | None:intergenic | 60.0% |
| !! | TGAAAGGTTGGTGACGGCGG+TGG | - | chr3_1:81707742-81707761 | None:intergenic | 60.0% |
| CGCCAAAACCACTGCAGCAG+AGG | + | chr3_1:81707769-81707788 | Msa0380150:CDS | 60.0% | |
| ! | GGCCTCTGCTGCAGTGGTTT+TGG | - | chr3_1:81707774-81707793 | None:intergenic | 60.0% |
| GTCTTTGGCCTCTGCTGCAG+TGG | - | chr3_1:81707780-81707799 | None:intergenic | 60.0% | |
| ! | GCAGATTACGGTCCGGTTCG+CGG | + | chr3_1:81707902-81707921 | Msa0380150:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3_1:81708601-81708620 | Msa0380150:intron | 60.0% |
| TCATACGCAGGGTCCGGGAA+GGG | - | chr3_1:81708617-81708636 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCGTATGA+GGG | + | chr3_1:81708617-81708636 | Msa0380150:intron | 60.0% | |
| !! | CGGCGGTGGCGGAGAATGAT+TGG | - | chr3_1:81707728-81707747 | None:intergenic | 65.0% |
| !! | AAGGTTGGTGACGGCGGTGG+CGG | - | chr3_1:81707739-81707758 | None:intergenic | 65.0% |
| ! | CGGTCCGGTTCGCGGTACAA+TGG | + | chr3_1:81707910-81707929 | Msa0380150:CDS | 65.0% |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr3_1:81708603-81708622 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr3_1:81708616-81708635 | None:intergenic | 65.0% | |
| CTCATACGCAGGGTCCGGGA+AGG | - | chr3_1:81708618-81708637 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+AGG | + | chr3_1:81708616-81708635 | Msa0380150:intron | 65.0% | |
| CTCCCTCATACGCAGGGTCC+GGG | - | chr3_1:81708622-81708641 | None:intergenic | 65.0% | |
| GCTCCCTCATACGCAGGGTC+CGG | - | chr3_1:81708623-81708642 | None:intergenic | 65.0% | |
| !! | CGGCGGTGGCGGAGAATGAT+TGG | - | chr3_1:81707728-81707747 | None:intergenic | 65.0% |
| !! | AAGGTTGGTGACGGCGGTGG+CGG | - | chr3_1:81707739-81707758 | None:intergenic | 65.0% |
| ! | CGGTCCGGTTCGCGGTACAA+TGG | + | chr3_1:81707910-81707929 | Msa0380150:CDS | 65.0% |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr3_1:81708603-81708622 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr3_1:81708616-81708635 | None:intergenic | 65.0% | |
| CTCATACGCAGGGTCCGGGA+AGG | - | chr3_1:81708618-81708637 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+AGG | + | chr3_1:81708616-81708635 | Msa0380150:intron | 65.0% | |
| CTCCCTCATACGCAGGGTCC+GGG | - | chr3_1:81708622-81708641 | None:intergenic | 65.0% | |
| GCTCCCTCATACGCAGGGTC+CGG | - | chr3_1:81708623-81708642 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 81707578 | 81709623 | 81707578 | ID=Msa0380150;Name=Msa0380150 |
| chr3_1 | mRNA | 81707578 | 81709623 | 81707578 | ID=Msa0380150-mRNA-1;Parent=Msa0380150;Name=Msa0380150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.75|0.6|1|0.75|0.8|5|0|247 |
| chr3_1 | exon | 81707578 | 81707973 | 81707578 | ID=Msa0380150-mRNA-1:exon:20776;Parent=Msa0380150-mRNA-1 |
| chr3_1 | exon | 81708066 | 81708122 | 81708066 | ID=Msa0380150-mRNA-1:exon:20777;Parent=Msa0380150-mRNA-1 |
| chr3_1 | exon | 81709073 | 81709159 | 81709073 | ID=Msa0380150-mRNA-1:exon:20778;Parent=Msa0380150-mRNA-1 |
| chr3_1 | exon | 81709325 | 81709411 | 81709325 | ID=Msa0380150-mRNA-1:exon:20779;Parent=Msa0380150-mRNA-1 |
| chr3_1 | exon | 81709510 | 81709623 | 81709510 | ID=Msa0380150-mRNA-1:exon:20780;Parent=Msa0380150-mRNA-1 |
| chr3_1 | CDS | 81707578 | 81707973 | 81707578 | ID=Msa0380150-mRNA-1:cds;Parent=Msa0380150-mRNA-1 |
| chr3_1 | CDS | 81708066 | 81708122 | 81708066 | ID=Msa0380150-mRNA-1:cds;Parent=Msa0380150-mRNA-1 |
| chr3_1 | CDS | 81709073 | 81709159 | 81709073 | ID=Msa0380150-mRNA-1:cds;Parent=Msa0380150-mRNA-1 |
| chr3_1 | CDS | 81709325 | 81709411 | 81709325 | ID=Msa0380150-mRNA-1:cds;Parent=Msa0380150-mRNA-1 |
| chr3_1 | CDS | 81709510 | 81709623 | 81709510 | ID=Msa0380150-mRNA-1:cds;Parent=Msa0380150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
