AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1030960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030960 MtrunA17_Chr7g0252281 94.608 983 52 1 1 983 1 982 0.0 1914
Msa1030960 MtrunA17_Chr6g0461901 48.490 629 284 12 3 595 1 625 6.52e-168 516
Msa1030960 MtrunA17_Chr2g0327571 25.664 226 142 6 89 297 81 297 8.76e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030960 AT5G13950.3 44.828 435 221 6 3 428 1 425 6.92e-109 360
Msa1030960 AT5G13950.3 27.851 377 208 15 650 982 597 953 1.05e-21 102
Msa1030960 AT5G13950.1 45.221 429 213 6 3 428 1 410 1.18e-108 359
Msa1030960 AT5G13950.1 27.851 377 208 15 650 982 582 938 9.58e-22 102
Msa1030960 AT5G13950.2 45.221 429 213 6 3 428 1 410 1.18e-108 359
Msa1030960 AT5G13950.2 27.851 377 208 15 650 982 582 938 9.58e-22 102
Msa1030960 AT5G13950.4 45.221 429 213 6 3 428 1 410 1.18e-108 359
Msa1030960 AT5G13950.4 27.851 377 208 15 650 982 582 938 9.58e-22 102
Msa1030960 AT3G45830.1 33.758 157 96 3 89 240 80 233 4.43e-17 87.4
Msa1030960 AT1G02290.1 33.871 124 78 2 85 205 31 153 1.48e-15 80.9

Find 302 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAATTAAATAAATATT+TGG 0.143216 7_1:-65221371 None:intergenic
TTGGAAACCCTTTCTTAAAA+TGG 0.183676 7_1:+65223594 Msa1030960:CDS
AGGACTAAACGAAAGAATTT+TGG 0.201867 7_1:+65223128 Msa1030960:CDS
AGCGAGTGTGAAGGGCAATT+TGG 0.214860 7_1:-65221656 None:intergenic
GTGTAGTTTGCCTCCTTTCT+TGG 0.223658 7_1:-65225967 None:intergenic
CTCTTCAGACCAGCAAATTC+AGG 0.228547 7_1:+65228299 Msa1030960:CDS
CAGGGGTGCTTCACTTTGTT+CGG 0.235888 7_1:+65224425 Msa1030960:intron
GTTGTCCAGGAATTACTTTC+TGG 0.238235 7_1:+65223557 Msa1030960:CDS
GCTGAAGCCATCATATTTCT+TGG 0.241352 7_1:-65225915 None:intergenic
TAGTACTCTTAACTGTGTTT+TGG 0.255011 7_1:+65226509 Msa1030960:CDS
CCTTAAAATGACTATAAAAT+TGG 0.257108 7_1:-65228044 None:intergenic
AAGGGTTACCTGAACGTAAT+TGG 0.266046 7_1:-65228422 None:intergenic
CGCTGTTGTGATAAGAATTA+TGG 0.276488 7_1:-65227132 None:intergenic
CAAAACTAACTATGTTAATT+AGG 0.284944 7_1:-65228693 None:intergenic
GCGAGTGTGAAGGGCAATTT+GGG 0.286152 7_1:-65221655 None:intergenic
CTTGTCCCATTGAGGAAATT+TGG 0.294813 7_1:-65225196 None:intergenic
CATGCTCCTCCTCCTGGGCC+TGG 0.296666 7_1:-65227039 None:intergenic
ATGTCAAACCTCAGAATATT+TGG 0.297027 7_1:-65224700 None:intergenic
CCACCCCTTTCATATAGATT+TGG 0.298364 7_1:+65227576 Msa1030960:CDS
AAGAGCTGGGTTAAATTTCC+AGG 0.308776 7_1:+65227993 Msa1030960:CDS
TCTTGGTGTAAATTAGATTC+TGG 0.308815 7_1:-65227835 None:intergenic
TGCCCTTCACACTCGCTCTT+AGG 0.310434 7_1:+65221662 Msa1030960:five_prime_UTR
TTATGGAGGGACGGGTTCTC+TGG 0.322298 7_1:-65227115 None:intergenic
CAAAGAAGAAAGCAATTAAA+TGG 0.322965 7_1:+65223068 Msa1030960:CDS
TGCAGCTAGTGGATCTTGCC+TGG 0.327302 7_1:-65228181 None:intergenic
GTGGGTAAGCTTGAAAATTC+AGG 0.329234 7_1:+65228830 Msa1030960:three_prime_UTR
AATCTCACATTTCTGTTGAA+TGG 0.330598 7_1:+65223180 Msa1030960:CDS
TCAACAGCCATTAGCATATA+AGG 0.331673 7_1:-65223044 None:intergenic
TTATCATTTGGCAGTATGAT+TGG 0.332500 7_1:+65224616 Msa1030960:intron
TCATGGTAAACAATCATATC+TGG 0.336872 7_1:-65224459 None:intergenic
CCTACTTTAAATGATCAAAT+AGG 0.340260 7_1:+65228633 Msa1030960:CDS
AATTCCTGGACAACTTGATT+TGG 0.341371 7_1:-65223548 None:intergenic
CCACCACTTACATATAGATT+TGG 0.345520 7_1:+65227372 Msa1030960:CDS
TCCAGGCACCCTGAATTTGC+TGG 0.348294 7_1:-65228308 None:intergenic
AGCCAATTTGCTCCTGGCTT+TGG 0.349564 7_1:-65227915 None:intergenic
CCACCGCTTGGATATAGATT+TGG 0.350247 7_1:+65227165 Msa1030960:CDS
GGGCAATTTGGGGATTATAA+TGG 0.351503 7_1:-65221644 None:intergenic
GCTTGAAAATTCAGGTTGAT+AGG 0.354916 7_1:+65228838 Msa1030960:three_prime_UTR
CACCACCATGCTCCTCCTCC+TGG 0.359202 7_1:-65227045 None:intergenic
TTCATGCCAGAAAACGTATC+AGG 0.360939 7_1:+65228123 Msa1030960:CDS
ATCTACTACTCCATAGGTTC+TGG 0.362720 7_1:-65228481 None:intergenic
TGACATCCGGGTCATATTCC+TGG 0.366334 7_1:+65225144 Msa1030960:CDS
TTTATATTGTTGAAACAAAC+TGG 0.367453 7_1:+65228998 Msa1030960:three_prime_UTR
TTTCTTAAGCAGTTTCTTCC+TGG 0.369686 7_1:+65223515 Msa1030960:CDS
TGTAGTTTGCCTCCTTTCTT+GGG 0.371010 7_1:-65225966 None:intergenic
TACCAAAGCCAGGAGCAAAT+TGG 0.371663 7_1:+65227913 Msa1030960:CDS
GATGCTTCACATAACAAAAC+TGG 0.378324 7_1:+65227214 Msa1030960:CDS
CCTTGATATATGACATATAT+TGG 0.379166 7_1:-65226019 None:intergenic
CCCGCTTGGCAACAACCCTT+TGG 0.379771 7_1:-65223214 None:intergenic
GCTCAGCTCCACACTTTCCT+AGG 0.380117 7_1:-65221497 None:intergenic
TTATTAACGGAGGAATTCTC+TGG 0.384178 7_1:-65227526 None:intergenic
TATCTCACCTTATATGCTAA+TGG 0.389223 7_1:+65223037 Msa1030960:exon
TAGATTCTGGACCAATCATT+CGG 0.389987 7_1:-65227822 None:intergenic
ATTAATACCGATAATTTCAT+TGG 0.390440 7_1:+65228264 Msa1030960:CDS
ATGTCCATCGTGATCAAATC+TGG 0.393064 7_1:-65223276 None:intergenic
TGCATGTTATGAATCACTTC+GGG 0.399595 7_1:+65229027 Msa1030960:three_prime_UTR
ATGATATAAAGAAAAGAAAA+TGG 0.408606 7_1:+65225072 Msa1030960:CDS
CAACATGATTGTTACCTCAT+AGG 0.410649 7_1:-65223369 None:intergenic
CTGCAAGAAATATTACTGAT+TGG 0.411422 7_1:+65228199 Msa1030960:CDS
TTCCTTTCGCCCAGAACCTA+TGG 0.411584 7_1:+65228471 Msa1030960:CDS
AGAACAAAACCGAGCATTCA+AGG 0.411771 7_1:+65227635 Msa1030960:CDS
TCATTCGGGTTTGTCTATCT+TGG 0.413250 7_1:-65227807 None:intergenic
GCCTGTTGGCAGTGTAGTCA+TGG 0.416847 7_1:-65227759 None:intergenic
TAATTTCTATAGGTTACAAT+TGG 0.427079 7_1:+65226701 Msa1030960:intron
TATCTAGATGTTAGATGTGT+TGG 0.431063 7_1:+65228796 Msa1030960:three_prime_UTR
CGTTTAGTCCTATATTGCTC+TGG 0.433752 7_1:-65223116 None:intergenic
ATCTCACATTTCTGTTGAAT+GGG 0.435644 7_1:+65223181 Msa1030960:CDS
CTTGAAAATTCAGGTTGATA+GGG 0.436970 7_1:+65228839 Msa1030960:three_prime_UTR
GTCATACTTAAATCATAGTA+AGG 0.437696 7_1:-65227736 None:intergenic
AGGAGTCCAGGCCCAGGAGG+AGG 0.438122 7_1:+65227033 Msa1030960:CDS
TGCAAGAAATATTACTGATT+GGG 0.439743 7_1:+65228200 Msa1030960:CDS
CCTATTTGATCATTTAAAGT+AGG 0.442467 7_1:-65228633 None:intergenic
GATAGACAAACCCGAATGAT+TGG 0.444589 7_1:+65227811 Msa1030960:CDS
AGGGGTGCTTCACTTTGTTC+GGG 0.446244 7_1:+65224426 Msa1030960:intron
AGGTTCTGGGCGAAAGGAAC+TGG 0.447274 7_1:-65228467 None:intergenic
CTTGGCGAAGACTTCAATAA+AGG 0.448412 7_1:+65225888 Msa1030960:CDS
ATGGTTCTCCAGAGCAATAT+AGG 0.448577 7_1:+65223108 Msa1030960:CDS
TCCCTGCATCATATGCAAAC+TGG 0.449155 7_1:+65226736 Msa1030960:CDS
ACCAGCAAATTCAGGGTGCC+TGG 0.450331 7_1:+65228307 Msa1030960:CDS
GAACACTAAATAAGTTATGA+TGG 0.450851 7_1:-65228386 None:intergenic
AGATTCTGGACCAATCATTC+GGG 0.451414 7_1:-65227821 None:intergenic
TTGGAATATCGTTTGAAGCC+TGG 0.452698 7_1:-65228011 None:intergenic
GCCATTGCCAGATCCATTCC+AGG 0.452838 7_1:-65228325 None:intergenic
GCAGCTAGTGGATCTTGCCT+GGG 0.453568 7_1:-65228180 None:intergenic
GTGTGTCTGATTGACTCATA+AGG 0.453911 7_1:-65228441 None:intergenic
GAAATTGTAGGCGGTGGTGA+GGG 0.456750 7_1:-65221734 None:intergenic
CAGGGTGCCTGGAATGGATC+TGG 0.457650 7_1:+65228318 Msa1030960:CDS
ACGTGATGCAGCTGGTGCTC+TGG 0.460235 7_1:+65228569 Msa1030960:CDS
CTTCATCTTCCAAGCTAGAC+TGG 0.460981 7_1:-65227075 None:intergenic
CATCTCCAGAAAGTAATTCC+TGG 0.461244 7_1:-65223562 None:intergenic
GTAATATTTCTTGCAGCTAG+TGG 0.461801 7_1:-65228192 None:intergenic
TTTGCAAACGTCTCTAACAT+TGG 0.462030 7_1:+65228071 Msa1030960:CDS
GCAATTAAATGGTGCAAGCC+TGG 0.462158 7_1:+65223079 Msa1030960:CDS
CAATATAACCAATTACGTTC+AGG 0.463122 7_1:+65228414 Msa1030960:CDS
AGGCGGTGGTGAGGGGAAAG+TGG 0.464420 7_1:-65221726 None:intergenic
CGAACTTGTTAAGAGTTTGA+AGG 0.465315 7_1:+65226464 Msa1030960:CDS
ACAGTATCATTATACGAGAA+AGG 0.465348 7_1:-65227493 None:intergenic
ATAATTACCGGTGAAATTGT+AGG 0.466975 7_1:-65221746 None:intergenic
GGTGCAAGCCTGGTTAGTTA+TGG 0.469377 7_1:+65223089 Msa1030960:CDS
CATACTTGAGGTCGTGGAAC+CGG 0.472548 7_1:+65228658 Msa1030960:CDS
CAGTATCATTATACGAGAAA+GGG 0.472916 7_1:-65227492 None:intergenic
GTTCATAATCCTTGAATGCT+CGG 0.474142 7_1:-65227644 None:intergenic
GGGAATGTTACAGTGACATC+CGG 0.474724 7_1:+65225131 Msa1030960:CDS
GTACACAATTGAACATTCAA+TGG 0.475973 7_1:+65227432 Msa1030960:CDS
CTCATCAAGGACAACGGGAT+TGG 0.476228 7_1:+65227949 Msa1030960:CDS
CTCATTGCCTTGTCCCATTG+AGG 0.477090 7_1:-65225204 None:intergenic
CTCATCCATGTCATATCATC+AGG 0.478114 7_1:-65228594 None:intergenic
GTCCAGTTTGCATATGATGC+AGG 0.478775 7_1:-65226738 None:intergenic
TCTCCAAATCTATATGTAAG+TGG 0.478786 7_1:-65227375 None:intergenic
CCAAAGGGTTGTTGCCAAGC+GGG 0.480617 7_1:+65223214 Msa1030960:CDS
TCTGGAGATGAATTTCACTT+TGG 0.481121 7_1:+65223575 Msa1030960:CDS
CAAATTCAGGGTGCCTGGAA+TGG 0.481854 7_1:+65228312 Msa1030960:CDS
ACCACCATGCTCCTCCTCCT+GGG 0.485109 7_1:-65227044 None:intergenic
CCCATGACTACACTGCCAAC+AGG 0.485792 7_1:+65227758 Msa1030960:CDS
TGACATCCAAATTTCCTCAA+TGG 0.487454 7_1:+65225190 Msa1030960:CDS
GAAAGATAAATCAAATGTAC+TGG 0.487967 7_1:+65226812 Msa1030960:CDS
ATGTTTAGATCACTTTGCAC+TGG 0.488346 7_1:-65223155 None:intergenic
AGTCCCTCATCAAGGACAAC+GGG 0.488563 7_1:+65227944 Msa1030960:CDS
ATAATTTCATTGGTCAGCCT+TGG 0.490290 7_1:+65228274 Msa1030960:CDS
TGCTTTCTCCTCTTCATCCC+AGG 0.490732 7_1:-65225162 None:intergenic
TTTAGATCACTTTGCACTGG+TGG 0.491752 7_1:-65223152 None:intergenic
ACAATTACGTAAATATCATA+AGG 0.492095 7_1:+65224518 Msa1030960:CDS
AACAAGTTCGTGCTGCGTCT+TGG 0.492550 7_1:-65226451 None:intergenic
GCTTCAAACGATATTCCAAT+GGG 0.494112 7_1:+65228015 Msa1030960:CDS
TATGGAGGGACGGGTTCTCT+GGG 0.494784 7_1:-65227114 None:intergenic
TAAATCAAATGTACTGGTAG+AGG 0.495032 7_1:+65226818 Msa1030960:CDS
GAAAAGAAAATGGTCAAACT+TGG 0.496665 7_1:+65225082 Msa1030960:CDS
TCGTGATCAAATCTGGCAAA+TGG 0.497519 7_1:-65223269 None:intergenic
CACAGTTAAGAGTACTAGCC+GGG 0.497861 7_1:-65226503 None:intergenic
GAGCACAGGAGTCCAGGCCC+AGG 0.499157 7_1:+65227027 Msa1030960:CDS
GAATCAAGCCAATTTGCTCC+TGG 0.500105 7_1:-65227921 None:intergenic
TCTTCAGACCAGCAAATTCA+GGG 0.500856 7_1:+65228300 Msa1030960:CDS
GACATCCAAATTTCCTCAAT+GGG 0.501103 7_1:+65225191 Msa1030960:CDS
TGGATTTCTAATTAAGCTGA+AGG 0.501554 7_1:+65224636 Msa1030960:CDS
AAGTGAAGTGCTTTCCTATG+AGG 0.502687 7_1:+65223355 Msa1030960:CDS
GGCTGTTAGTGCCCCTCGCA+TGG 0.503567 7_1:+65228221 Msa1030960:CDS
TTCAACGATTATGAAATGTC+AGG 0.503971 7_1:+65227240 Msa1030960:CDS
TAATCTAGTGGATGAGAAGA+TGG 0.505223 7_1:-65228537 None:intergenic
TGTCGAGAGACGGGTTCTGT+TGG 0.505359 7_1:-65227321 None:intergenic
AGGCTGACCAATGAAATTAT+CGG 0.505474 7_1:-65228271 None:intergenic
CCAATATATGTCATATATCA+AGG 0.507528 7_1:+65226019 Msa1030960:CDS
CATCCACTAGATTATTTCAG+TGG 0.508940 7_1:+65228546 Msa1030960:CDS
TCTACTACTCCATAGGTTCT+GGG 0.512303 7_1:-65228480 None:intergenic
TGATAAGAATTATGGAGGGA+CGG 0.512882 7_1:-65227124 None:intergenic
CTGCATGTTATGAATCACTT+CGG 0.513067 7_1:+65229026 Msa1030960:three_prime_UTR
ATTCAAGGATTATGAACTCT+CGG 0.514090 7_1:+65227650 Msa1030960:CDS
AGAGCCAAATCAAGTTGTCC+AGG 0.514668 7_1:+65223544 Msa1030960:CDS
AAATTGTAGGCGGTGGTGAG+GGG 0.514717 7_1:-65221733 None:intergenic
ACTGGAGCAAGATCCACAAA+AGG 0.517558 7_1:+65228718 Msa1030960:three_prime_UTR
GATAAGAATTATGGAGGGAC+GGG 0.519423 7_1:-65227123 None:intergenic
CCTTCGCGCCAACTTGCTCT+CGG 0.521040 7_1:-65221519 None:intergenic
CTCCATAGGTTCTGGGCGAA+AGG 0.522077 7_1:-65228473 None:intergenic
ATCCACAAAAGGGATGAGAT+AGG 0.522500 7_1:+65228729 Msa1030960:three_prime_UTR
CTTCGGTTCTTACCAAAGCC+AGG 0.523206 7_1:+65227903 Msa1030960:CDS
GGAAAGTGGAAAACGAAGTA+AGG 0.523882 7_1:-65221712 None:intergenic
GTTGCCAAGCGGGAACAGAT+TGG 0.526201 7_1:+65223224 Msa1030960:CDS
AAGTCAGATGATGGTCCCTT+CGG 0.526856 7_1:+65227886 Msa1030960:CDS
TAAAATTGGCCATTCCCCAT+TGG 0.527911 7_1:-65228030 None:intergenic
CTTGATTCAGTCCCTCATCA+AGG 0.528173 7_1:+65227936 Msa1030960:CDS
TAGGATCATACTTGAGGTCG+TGG 0.530071 7_1:+65228652 Msa1030960:CDS
TGTTAATAACCAGTCTAGCT+TGG 0.530242 7_1:+65227066 Msa1030960:CDS
TATTAATGAACGGCTTTCAT+CGG 0.531588 7_1:-65222963 None:intergenic
GCACTTCACTTAAACTATCC+AGG 0.531960 7_1:-65223343 None:intergenic
CACTGCCAACAGGCTATCAC+TGG 0.532764 7_1:+65227768 Msa1030960:CDS
AGAAGAACTTGCATGAGCAT+TGG 0.532815 7_1:+65226586 Msa1030960:CDS
GAATCTTCATCGGATGAGAA+AGG 0.533045 7_1:-65227286 None:intergenic
GACATCCGGGTCATATTCCT+GGG 0.533135 7_1:+65225145 Msa1030960:CDS
ACCGGTGAAATTGTAGGCGG+TGG 0.533268 7_1:-65221740 None:intergenic
AGGTAAACCAAGAAATATGA+TGG 0.534183 7_1:+65225908 Msa1030960:CDS
GATAAGAATTGTCGAGAGAC+GGG 0.534554 7_1:-65227330 None:intergenic
TTCAATGGTTATGAACTCTC+AGG 0.535637 7_1:+65227447 Msa1030960:CDS
GCTGTGATAAGATTTATTAA+CGG 0.535743 7_1:-65227539 None:intergenic
TGTGTTGGAAAGAGAAAGCG+TGG 0.539054 7_1:+65228811 Msa1030960:three_prime_UTR
ACACCAAGAAAACATTGGTA+AGG 0.539452 7_1:+65227849 Msa1030960:CDS
GGTATTAATGTGAGATTGAG+AGG 0.540132 7_1:-65228250 None:intergenic
GGGAGTTTCCTCCCGTGCCA+AGG 0.541221 7_1:-65228365 None:intergenic
GATCAAGGTCAGAGGCAAGC+TGG 0.541280 7_1:+65228093 Msa1030960:CDS
CGGGATGATTCCATCGGTGA+AGG 0.541376 7_1:+65227670 Msa1030960:CDS
ATGATGTTTGACAGGGTGCT+TGG 0.543416 7_1:+65225870 Msa1030960:intron
TGTGTCTGATTGACTCATAA+GGG 0.543563 7_1:-65228440 None:intergenic
AACCTAAGAGCGAGTGTGAA+GGG 0.543731 7_1:-65221664 None:intergenic
TTCAGTGGACGTGATGCAGC+TGG 0.544026 7_1:+65228561 Msa1030960:CDS
CGATGACGAGCTCCACCGCT+TGG 0.544441 7_1:+65227153 Msa1030960:CDS
GTTGCACATGAAAGTTATCA+AGG 0.547807 7_1:-65226536 None:intergenic
TTCAAGGATTATGAACTCTC+GGG 0.549456 7_1:+65227651 Msa1030960:CDS
CTCAGATGATCCTTCACCGA+TGG 0.549658 7_1:-65227680 None:intergenic
ACCTATGGAGTAGTAGATGC+AGG 0.550339 7_1:+65228486 Msa1030960:CDS
GCCTGGAATGGATCTGGCAA+TGG 0.553538 7_1:+65228324 Msa1030960:CDS
GGTAATATTTATTCTGACAC+AGG 0.554644 7_1:+65228144 Msa1030960:CDS
TAATCTAGTTCCGAAAATAA+CGG 0.554899 7_1:+65221544 Msa1030960:five_prime_UTR
CTGGCTTTGGTAAGAACCGA+AGG 0.556503 7_1:-65227902 None:intergenic
ACCAAAGGGTTGTTGCCAAG+CGG 0.557753 7_1:+65223213 Msa1030960:CDS
GATGCCAATCTGTTCCCGCT+TGG 0.557815 7_1:-65223228 None:intergenic
CCGAGAGCAAGTTGGCGCGA+AGG 0.558552 7_1:+65221519 Msa1030960:five_prime_UTR
CTCAGCTCCACACTTTCCTA+GGG 0.558840 7_1:-65221496 None:intergenic
TAATTAAGCTGAAGGAGAGG+TGG 0.559139 7_1:+65224644 Msa1030960:CDS
TGAAATTGTAGGCGGTGGTG+AGG 0.560978 7_1:-65221735 None:intergenic
CAGGATGATCCCATCAGTGA+GGG 0.561185 7_1:+65227466 Msa1030960:CDS
GGCTGTTCACTATTAATGAA+CGG 0.561528 7_1:-65222973 None:intergenic
GGCTTCAAACGATATTCCAA+TGG 0.562243 7_1:+65228014 Msa1030960:CDS
AACACTAAATAAGTTATGAT+GGG 0.562434 7_1:-65228385 None:intergenic
AACGATATTCCAATGGGGAA+TGG 0.562666 7_1:+65228021 Msa1030960:CDS
AGTCTATTTAGTCAGAGCCT+TGG 0.562741 7_1:+65228348 Msa1030960:CDS
TCACGATGGACATGAAGTCT+TGG 0.563479 7_1:+65223286 Msa1030960:CDS
GTCATATTCCTGGGATGAAG+AGG 0.563546 7_1:+65225154 Msa1030960:CDS
ATCAAATAGGATCATACTTG+AGG 0.564325 7_1:+65228646 Msa1030960:CDS
TGATAAGAATTGTCGAGAGA+CGG 0.566428 7_1:-65227331 None:intergenic
CAGGATGATCCCATCGGTGA+AGG 0.567090 7_1:+65227259 Msa1030960:CDS
GGGAACAGATTGGCATCAGT+TGG 0.568573 7_1:+65223234 Msa1030960:CDS
ATTTAGTCAGAGCCTTGGCA+CGG 0.572165 7_1:+65228353 Msa1030960:CDS
TATTAACGGAGGAATTCTCT+GGG 0.573045 7_1:-65227525 None:intergenic
TTTAGTCAGAGCCTTGGCAC+GGG 0.573921 7_1:+65228354 Msa1030960:CDS
CAGGCCCAGGAGGAGGAGCA+TGG 0.574159 7_1:+65227040 Msa1030960:CDS
AGGTATCGAATGCTGAAAGC+AGG 0.577593 7_1:+65228936 Msa1030960:three_prime_UTR
TCAGAGATGATGATCATGAT+GGG 0.580024 7_1:+65225111 Msa1030960:CDS
TCTAACAAAAGAATCTTCAT+CGG 0.580598 7_1:-65227296 None:intergenic
ATCTTATCACAGCGATGATG+AGG 0.582360 7_1:+65227549 Msa1030960:CDS
TTCAGAGATGATGATCATGA+TGG 0.582825 7_1:+65225110 Msa1030960:CDS
CTGGAGAACCATAACTAACC+AGG 0.583931 7_1:-65223097 None:intergenic
CAGCTAGTGGATCTTGCCTG+GGG 0.584455 7_1:-65228179 None:intergenic
TTTCCAAATCTATATGAAAG+GGG 0.584653 7_1:-65227579 None:intergenic
TGATTTGGCTCTAAGTCACC+AGG 0.585102 7_1:-65223533 None:intergenic
AAAGGAGCTCCTTCACCGAT+GGG 0.586539 7_1:-65227268 None:intergenic
ACGTCTCTAACATTGGATCA+AGG 0.588129 7_1:+65228078 Msa1030960:CDS
AATCCCGTTGTCCTTGATGA+GGG 0.588768 7_1:-65227947 None:intergenic
TCTTTGATAAATAATTTGAA+CGG 0.588853 7_1:-65226558 None:intergenic
AATTAAGCTGAAGGAGAGGT+GGG 0.589330 7_1:+65224645 Msa1030960:CDS
GAAAGGAGCTCCTTCACCGA+TGG 0.589486 7_1:-65227269 None:intergenic
GGAATGTTACAGTGACATCC+GGG 0.591091 7_1:+65225132 Msa1030960:CDS
AGTCAGAGCCTTGGCACGGG+AGG 0.594185 7_1:+65228357 Msa1030960:CDS
CTGGAGCAAGATCCACAAAA+GGG 0.594278 7_1:+65228719 Msa1030960:three_prime_UTR
CAATCCCGTTGTCCTTGATG+AGG 0.596160 7_1:-65227948 None:intergenic
ACACAGTTAAGAGTACTAGC+CGG 0.596710 7_1:-65226504 None:intergenic
ATGGGATGCTAATCACCAAA+GGG 0.596779 7_1:+65223199 Msa1030960:CDS
CGTCCACTGAAATAATCTAG+TGG 0.597280 7_1:-65228549 None:intergenic
TCCAGTTTGCATATGATGCA+GGG 0.599519 7_1:-65226737 None:intergenic
CTAACATCTAGATATGTACA+TGG 0.600906 7_1:-65228787 None:intergenic
ACCACCGCCTACAATTTCAC+CGG 0.601239 7_1:+65221739 Msa1030960:five_prime_UTR
CCAAATCTATATGAAAGGGG+TGG 0.601625 7_1:-65227576 None:intergenic
CAGCTAGCCCTAGGAAAGTG+TGG 0.601646 7_1:+65221489 Msa1030960:five_prime_UTR
AAGGCAATGAGCTTCAAAGA+AGG 0.601771 7_1:+65225216 Msa1030960:CDS
AAATTCTACCAAATATTCTG+AGG 0.602467 7_1:+65224692 Msa1030960:CDS
TTCTAATTAAGCTGAAGGAG+AGG 0.604463 7_1:+65224641 Msa1030960:CDS
GTGGGAGGAAGACCCAAGAA+AGG 0.606490 7_1:+65225954 Msa1030960:CDS
GAGAGGGTGCTACCATGCGA+GGG 0.607286 7_1:-65228233 None:intergenic
TTCATTAATAGTGAACAGCC+TGG 0.607810 7_1:+65222976 Msa1030960:five_prime_UTR
CAGGAAGTTACTTAATCCCC+AGG 0.608178 7_1:+65228163 Msa1030960:CDS
AACTCTCGGGATGATTCCAT+CGG 0.608690 7_1:+65227664 Msa1030960:CDS
CCAAATCTATATGTAAGTGG+TGG 0.609827 7_1:-65227372 None:intergenic
CCTGTTGGCAGTGTAGTCAT+GGG 0.611449 7_1:-65227758 None:intergenic
AATTTACACCAAGAAAACAT+TGG 0.611861 7_1:+65227844 Msa1030960:CDS
CATCGGTGAAGGATCATCTG+AGG 0.612176 7_1:+65227681 Msa1030960:CDS
ACTTGTGGACAGCTAGCCCT+AGG 0.614122 7_1:+65221480 Msa1030960:five_prime_UTR
CAAATTTCCTCAATGGGACA+AGG 0.614207 7_1:+65225197 Msa1030960:CDS
GATAACATTCATGCTAATGA+CGG 0.615175 7_1:+65225993 Msa1030960:CDS
TTCATCCCAGGAATATGACC+CGG 0.615803 7_1:-65225150 None:intergenic
ACCTGCATCTACTACTCCAT+AGG 0.618677 7_1:-65228487 None:intergenic
TGTTGTGATAAGAATTATGG+AGG 0.618980 7_1:-65227129 None:intergenic
GTTCTCTGGGACGCTAACAA+TGG 0.620420 7_1:-65227101 None:intergenic
GATGAAGAGGAGAAAGCATA+CGG 0.621806 7_1:+65225167 Msa1030960:CDS
TTTATGCTTAATAATGTGGG+AGG 0.622494 7_1:+65225939 Msa1030960:CDS
TCTCAAATTCAAGTGTTGTG+TGG 0.622989 7_1:+65221611 Msa1030960:five_prime_UTR
TAGTAGATGCAGGTACACAT+AGG 0.623213 7_1:+65228496 Msa1030960:CDS
ATCGGTGAAGGATCATCTGA+GGG 0.624551 7_1:+65227682 Msa1030960:CDS
TTACACAGGAAGTCAGATGA+TGG 0.625201 7_1:+65227877 Msa1030960:CDS
CAATTATGAAAGTACACTTG+TGG 0.628963 7_1:+65221465 Msa1030960:five_prime_UTR
GTGATAAGATTTATTAACGG+AGG 0.632896 7_1:-65227536 None:intergenic
GATCATCTGAGGGTCATGCA+TGG 0.633247 7_1:+65227692 Msa1030960:CDS
GAGCTGAGCCGAGAGCAAGT+TGG 0.633973 7_1:+65221511 Msa1030960:five_prime_UTR
TAACCTAAGAGCGAGTGTGA+AGG 0.638015 7_1:-65221665 None:intergenic
GGTATCATCTAAAAGCATCC+CGG 0.638736 7_1:+65226485 Msa1030960:CDS
CCAAATCTATATCCAAGCGG+TGG 0.639597 7_1:-65227165 None:intergenic
AGTATCATTATACGAGAAAG+GGG 0.642248 7_1:-65227491 None:intergenic
TCATACTTAAATCATAGTAA+GGG 0.643572 7_1:-65227735 None:intergenic
ATTTACCAGTGATAGCCTGT+TGG 0.645383 7_1:-65227773 None:intergenic
TTTGCCAGATTTGATCACGA+TGG 0.649072 7_1:+65223272 Msa1030960:CDS
TGGTGCCTGATGATATGACA+TGG 0.651255 7_1:+65228589 Msa1030960:CDS
CAGTCCCTCATCAAGGACAA+CGG 0.651612 7_1:+65227943 Msa1030960:CDS
AATGGGATGCTAATCACCAA+AGG 0.652621 7_1:+65223198 Msa1030960:CDS
TGGCTTTGGTAAGAACCGAA+GGG 0.653359 7_1:-65227901 None:intergenic
GGATGATCCCATCAGTGAGG+GGG 0.656394 7_1:+65227468 Msa1030960:CDS
GGAGGAAGACCCAAGAAAGG+AGG 0.658566 7_1:+65225957 Msa1030960:CDS
GTAAGGAATGAGATTGAGCG+AGG 0.660641 7_1:-65221695 None:intergenic
AGGATGATCCCATCAGTGAG+GGG 0.665172 7_1:+65227467 Msa1030960:CDS
TAACATTGGATCAAGGTCAG+AGG 0.665378 7_1:+65228085 Msa1030960:CDS
GAAAGGAGGCAAACTACACA+AGG 0.668351 7_1:+65225971 Msa1030960:CDS
AAATGTCAGGATGATCCCAT+CGG 0.670910 7_1:+65227253 Msa1030960:CDS
TGCTGGTCTGAAGAGAACCA+AGG 0.672607 7_1:-65228291 None:intergenic
AGAGGGTGCTACCATGCGAG+GGG 0.674689 7_1:-65228232 None:intergenic
GTATTAATGTGAGATTGAGA+GGG 0.675665 7_1:-65228249 None:intergenic
TCAGGATGATCCCATCAGTG+AGG 0.678980 7_1:+65227465 Msa1030960:CDS
TTGGTAAGGAGTTGTTACAC+AGG 0.681191 7_1:+65227863 Msa1030960:CDS
CGAGTGTGAAGGGCAATTTG+GGG 0.683926 7_1:-65221654 None:intergenic
TCTAGTGGATGAGAAGATGG+TGG 0.693017 7_1:-65228534 None:intergenic
GTTGTGATAAGAATTATGGA+GGG 0.700399 7_1:-65227128 None:intergenic
ACATGGTGTTAAGTTGAGCA+TGG 0.703161 7_1:-65228770 None:intergenic
GCCCAGGAGGAGGAGCATGG+TGG 0.703424 7_1:+65227043 Msa1030960:CDS
TTACCAAATCTATATCCAAG+CGG 0.703973 7_1:-65227168 None:intergenic
ATTACCGGTGAAATTGTAGG+CGG 0.740081 7_1:-65221743 None:intergenic
GTGTTGGAAAGAGAAAGCGT+GGG 0.744859 7_1:+65228812 Msa1030960:three_prime_UTR
CTCGACAATTCTTATCACAG+CGG 0.757420 7_1:+65227337 Msa1030960:CDS
CTTCAAACGATATTCCAATG+GGG 0.772354 7_1:+65228016 Msa1030960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAAACAAAAAATATAA+AGG - chr7_1:65223919-65223938 None:intergenic 10.0%
!!! ATATTTTTGATAGATAAAAA+TGG - chr7_1:65225340-65225359 None:intergenic 10.0%
!!! AATGTTTTTATTTCTTATAT+TGG + chr7_1:65225716-65225735 Msa1030960:intron 10.0%
!! GAATTAATATAAATCAAATT+AGG - chr7_1:65226285-65226304 None:intergenic 10.0%
!!! GAAAAAAATATTTTATCAAA+AGG + chr7_1:65227598-65227617 Msa1030960:CDS 10.0%
!!! GATTATTTAATAATTTTCAA+AGG + chr7_1:65228916-65228935 Msa1030960:three_prime_UTR 10.0%
!!! TTATATTGTTTTAATTTTGG+TGG - chr7_1:65221326-65221345 None:intergenic 15.0%
!! ATAGAGAAATAAATAATTAC+CGG - chr7_1:65221761-65221780 None:intergenic 15.0%
!!! TTTTTGAAATATGATAATGT+AGG + chr7_1:65222402-65222421 Msa1030960:intron 15.0%
!! TATATTTATGATGACATATT+TGG - chr7_1:65222607-65222626 None:intergenic 15.0%
!!! ACAAAAACTGTTTATATTTT+TGG - chr7_1:65223417-65223436 None:intergenic 15.0%
!!! TTTTATTGAATATTGAGAAT+AGG - chr7_1:65224190-65224209 None:intergenic 15.0%
!! ATGATATAAAGAAAAGAAAA+TGG + chr7_1:65225072-65225091 Msa1030960:CDS 15.0%
!!! CAAAAAAAAATACTATTTTG+TGG + chr7_1:65226321-65226340 Msa1030960:intron 15.0%
!! TCTTTGATAAATAATTTGAA+CGG - chr7_1:65226561-65226580 None:intergenic 15.0%
!!! AGAAGATATTTAATTTCTAT+AGG + chr7_1:65226691-65226710 Msa1030960:intron 15.0%
!!! GAGAAAAATATTTTATCAAA+AGG + chr7_1:65227394-65227413 Msa1030960:CDS 15.0%
!!! AAAAATATTTTATCAAAAGG+AGG + chr7_1:65227397-65227416 Msa1030960:CDS 15.0%
!! AACATACATCCAATAAAAAA+CGG + chr7_1:65221437-65221456 Msa1030960:five_prime_UTR 20.0%
!! TATGGTTAAATTTATCCATT+AGG + chr7_1:65222217-65222236 Msa1030960:intron 20.0%
!! ATGGTTAAATTTATCCATTA+GGG + chr7_1:65222218-65222237 Msa1030960:intron 20.0%
!! AAAAAGTTACTGTAAAAAGT+TGG - chr7_1:65222475-65222494 None:intergenic 20.0%
!! ATAACTAGTGAAGATAAATA+AGG + chr7_1:65222624-65222643 Msa1030960:intron 20.0%
!! ATTGCAAACTTTAATCATTA+TGG + chr7_1:65222658-65222677 Msa1030960:intron 20.0%
!!! TCTTTATATTTTCTTTGCAT+AGG + chr7_1:65223628-65223647 Msa1030960:intron 20.0%
!!! ACAATATTTCAGATTTTAGA+AGG + chr7_1:65223718-65223737 Msa1030960:intron 20.0%
!!! AATCAGTAAATTACTGTTTT+CGG - chr7_1:65223804-65223823 None:intergenic 20.0%
!!! AATTTACTGATTTCAGATTT+TGG + chr7_1:65223812-65223831 Msa1030960:intron 20.0%
!!! ATCAAATGAAATGTTTTACA+AGG + chr7_1:65223845-65223864 Msa1030960:intron 20.0%
!!! CAAAGAAAATGAGATAATTT+TGG - chr7_1:65223878-65223897 None:intergenic 20.0%
!!! CAAAATTATCTCATTTTCTT+TGG + chr7_1:65223876-65223895 Msa1030960:intron 20.0%
!!! TTTGTATTATTAATTTGCTG+AGG - chr7_1:65224313-65224332 None:intergenic 20.0%
!! ACAATTACGTAAATATCATA+AGG + chr7_1:65224518-65224537 Msa1030960:CDS 20.0%
!!! ATATGTTGTCATTTATCATT+TGG + chr7_1:65224604-65224623 Msa1030960:intron 20.0%
!!! TATTCCATAATTTTATGACA+AGG + chr7_1:65224798-65224817 Msa1030960:intron 20.0%
!! ATGATTGAAAGAAATAATCT+GGG + chr7_1:65224875-65224894 Msa1030960:intron 20.0%
!!! GTATTTTATTAGAAAGTGTA+TGG + chr7_1:65225470-65225489 Msa1030960:intron 20.0%
!! TAATTTCTATAGGTTACAAT+TGG + chr7_1:65226701-65226720 Msa1030960:intron 20.0%
!!! GTAAAAGATGTTTTATCAAA+AGG + chr7_1:65227187-65227206 Msa1030960:CDS 20.0%
!!! TTTTCCAAATCTATATGAAA+GGG - chr7_1:65227583-65227602 None:intergenic 20.0%
!!! TTTTTCCAAATCTATATGAA+AGG - chr7_1:65227584-65227603 None:intergenic 20.0%
!! TCATACTTAAATCATAGTAA+GGG - chr7_1:65227738-65227757 None:intergenic 20.0%
!! CCTTAAAATGACTATAAAAT+TGG - chr7_1:65228047-65228066 None:intergenic 20.0%
!!! CCAATTTTATAGTCATTTTA+AGG + chr7_1:65228044-65228063 Msa1030960:CDS 20.0%
!! ATTAATACCGATAATTTCAT+TGG + chr7_1:65228264-65228283 Msa1030960:CDS 20.0%
!! AACACTAAATAAGTTATGAT+GGG - chr7_1:65228388-65228407 None:intergenic 20.0%
!!! AATTAGGTAAAACATTTTAC+CGG - chr7_1:65228680-65228699 None:intergenic 20.0%
!! CAAAACTAACTATGTTAATT+AGG - chr7_1:65228696-65228715 None:intergenic 20.0%
!! TTTATATTGTTGAAACAAAC+TGG + chr7_1:65228998-65229017 Msa1030960:three_prime_UTR 20.0%
!! TAATCTAGTTCCGAAAATAA+CGG + chr7_1:65221544-65221563 Msa1030960:five_prime_UTR 25.0%
!! TATAGAAAACCCTTTTCATT+GGG - chr7_1:65222084-65222103 None:intergenic 25.0%
!! AATGAAAAGGGTTTTCTATA+GGG + chr7_1:65222084-65222103 Msa1030960:intron 25.0%
! AAAAAAATCAACATCCCTAA+TGG - chr7_1:65222235-65222254 None:intergenic 25.0%
!!! TTAGGGATGTTGATTTTTTT+TGG + chr7_1:65222235-65222254 Msa1030960:intron 25.0%
!!! TGTTATTTCAATATGACATG+TGG + chr7_1:65222289-65222308 Msa1030960:intron 25.0%
!! GTTATTTCAATATGACATGT+GGG + chr7_1:65222290-65222309 Msa1030960:intron 25.0%
!!! TTACAGTAACTTTTTTCCTT+TGG + chr7_1:65222480-65222499 Msa1030960:intron 25.0%
!!! TTTGATTTGCAGAATAAGTA+TGG + chr7_1:65222578-65222597 Msa1030960:intron 25.0%
! ATAACAATATAGACCATGTT+TGG - chr7_1:65222746-65222765 None:intergenic 25.0%
!! ATATTGTTATTCCTTAACCT+TGG + chr7_1:65222756-65222775 Msa1030960:intron 25.0%
!!! GTTTTGTTGAAACATAGAAT+TGG + chr7_1:65222795-65222814 Msa1030960:intron 25.0%
!! TAATTGAATCTCTTTGCTTT+TGG + chr7_1:65222922-65222941 Msa1030960:intron 25.0%
! CAAAGAAGAAAGCAATTAAA+TGG + chr7_1:65223068-65223087 Msa1030960:CDS 25.0%
! AGACAATTTAGAAATACTCT+TGG - chr7_1:65223440-65223459 None:intergenic 25.0%
!!! CATCTTACCATTTTAAGAAA+GGG - chr7_1:65223604-65223623 None:intergenic 25.0%
!!! ACATCTTACCATTTTAAGAA+AGG - chr7_1:65223605-65223624 None:intergenic 25.0%
! TTTAGAAGGATGAAAACTAT+AGG + chr7_1:65223732-65223751 Msa1030960:intron 25.0%
! CTTGTAAAATAGGCAAAATT+TGG - chr7_1:65223779-65223798 None:intergenic 25.0%
! AGAATGAGTTTACTACATAA+TGG + chr7_1:65224071-65224090 Msa1030960:intron 25.0%
!!! CTACATAATGGTTATTTTCT+TGG + chr7_1:65224083-65224102 Msa1030960:intron 25.0%
! ATTGAATATTGAGAATAGGA+TGG - chr7_1:65224186-65224205 None:intergenic 25.0%
! AAATTGATAGAAACAGTTGA+AGG - chr7_1:65224223-65224242 None:intergenic 25.0%
! GAAAAAAGAACTTAAGTTTG+CGG + chr7_1:65224335-65224354 Msa1030960:intron 25.0%
! AAAAAAGAACTTAAGTTTGC+GGG + chr7_1:65224336-65224355 Msa1030960:intron 25.0%
! AAATTCTACCAAATATTCTG+AGG + chr7_1:65224692-65224711 Msa1030960:CDS 25.0%
!! CAGATTATTTCTTTCAATCA+TGG - chr7_1:65224876-65224895 None:intergenic 25.0%
! CATGATTGAAAGAAATAATC+TGG + chr7_1:65224874-65224893 Msa1030960:intron 25.0%
! TGATTGAAAGAAATAATCTG+GGG + chr7_1:65224876-65224895 Msa1030960:intron 25.0%
! AAACAATACAGACACTAAAT+AGG - chr7_1:65225013-65225032 None:intergenic 25.0%
! GATATTTGGTTGTTATGTTA+TGG + chr7_1:65225291-65225310 Msa1030960:intron 25.0%
!!! GGTCAATTTTTTTATCTTAG+AGG - chr7_1:65225319-65225338 None:intergenic 25.0%
! AATGAGTATCTATAACAAGT+AGG + chr7_1:65225373-65225392 Msa1030960:intron 25.0%
! ACACTTTCTAATAAAATACC+AGG - chr7_1:65225469-65225488 None:intergenic 25.0%
! AGAGCTATCTAAGTATTTAA+GGG - chr7_1:65225575-65225594 None:intergenic 25.0%
! TAACATAGTCAGAAGAAATA+AGG - chr7_1:65225629-65225648 None:intergenic 25.0%
!!! ATATTGGTATTTTGATTTGC+TGG + chr7_1:65225732-65225751 Msa1030960:intron 25.0%
! ATAACAAAATGATGTTTGAC+AGG + chr7_1:65225862-65225881 Msa1030960:intron 25.0%
! TAACAAAATGATGTTTGACA+GGG + chr7_1:65225863-65225882 Msa1030960:intron 25.0%
!! AGCTTTTATGCTTAATAATG+TGG + chr7_1:65225935-65225954 Msa1030960:CDS 25.0%
!! GCTTTTATGCTTAATAATGT+GGG + chr7_1:65225936-65225955 Msa1030960:CDS 25.0%
! CCTTGATATATGACATATAT+TGG - chr7_1:65226022-65226041 None:intergenic 25.0%
! CCAATATATGTCATATATCA+AGG + chr7_1:65226019-65226038 Msa1030960:CDS 25.0%
!!! ACAATCATTTTTTGTCACAT+CGG + chr7_1:65226175-65226194 Msa1030960:intron 25.0%
! GAAAGATAAATCAAATGTAC+TGG + chr7_1:65226812-65226831 Msa1030960:CDS 25.0%
!!! TTTTAATGGATCTTCAGAAA+AGG - chr7_1:65226849-65226868 None:intergenic 25.0%
! TTGAATTTGACAAGATACTT+AGG + chr7_1:65226914-65226933 Msa1030960:intron 25.0%
!!! GGTTTTAACAAAAACCTTAA+TGG - chr7_1:65226970-65226989 None:intergenic 25.0%
! GTATGGAAAATTAATGGAAA+AGG - chr7_1:65226991-65227010 None:intergenic 25.0%
!! TTTCCATTAATTTTCCATAC+AGG + chr7_1:65226991-65227010 Msa1030960:intron 25.0%
! TCTAACAAAAGAATCTTCAT+CGG - chr7_1:65227299-65227318 None:intergenic 25.0%
! GCTGTGATAAGATTTATTAA+CGG - chr7_1:65227542-65227561 None:intergenic 25.0%
! TTTCCAAATCTATATGAAAG+GGG - chr7_1:65227582-65227601 None:intergenic 25.0%
! GTCATACTTAAATCATAGTA+AGG - chr7_1:65227739-65227758 None:intergenic 25.0%
! AATTTACACCAAGAAAACAT+TGG + chr7_1:65227844-65227863 Msa1030960:CDS 25.0%
!!! TCTTTTTTGTTCATGATGAT+AGG - chr7_1:65227977-65227996 None:intergenic 25.0%
!! TGCAAGAAATATTACTGATT+GGG + chr7_1:65228200-65228219 Msa1030960:CDS 25.0%
! GAACACTAAATAAGTTATGA+TGG - chr7_1:65228389-65228408 None:intergenic 25.0%
!!! TCATTTAAAGTAGGATTTTG+AGG - chr7_1:65228627-65228646 None:intergenic 25.0%
!! CCTATTTGATCATTTAAAGT+AGG - chr7_1:65228636-65228655 None:intergenic 25.0%
! CCTACTTTAAATGATCAAAT+AGG + chr7_1:65228633-65228652 Msa1030960:CDS 25.0%
! ACAAAATATAGCTCAAAAAG+AGG - chr7_1:65228964-65228983 None:intergenic 25.0%
!!! ATTGTCTCTCCGTTTTTTAT+TGG - chr7_1:65221449-65221468 None:intergenic 30.0%
! CAATTATGAAAGTACACTTG+TGG + chr7_1:65221465-65221484 Msa1030960:five_prime_UTR 30.0%
ATAATTACCGGTGAAATTGT+AGG - chr7_1:65221749-65221768 None:intergenic 30.0%
TTTCATTATTCCTGTCAATG+CGG + chr7_1:65221808-65221827 Msa1030960:intron 30.0%
! TCCAATGTTTTTCTTCGTAT+TGG + chr7_1:65221847-65221866 Msa1030960:intron 30.0%
! CCAATGTTTTTCTTCGTATT+GGG + chr7_1:65221848-65221867 Msa1030960:intron 30.0%
GTTAAATTAGTATGCGTTGT+CGG + chr7_1:65221894-65221913 Msa1030960:intron 30.0%
ATTTGAATATTTGGACTGCA+TGG + chr7_1:65222034-65222053 Msa1030960:intron 30.0%
! CTATAGAAAACCCTTTTCAT+TGG - chr7_1:65222085-65222104 None:intergenic 30.0%
! CAATGAAAAGGGTTTTCTAT+AGG + chr7_1:65222083-65222102 Msa1030960:intron 30.0%
! ATGAAAAGGGTTTTCTATAG+GGG + chr7_1:65222085-65222104 Msa1030960:intron 30.0%
! GATAGCTTCATGCTTTAAAT+TGG + chr7_1:65222107-65222126 Msa1030960:intron 30.0%
!!! GTTGCATTGCAGTTTTATTA+TGG + chr7_1:65222199-65222218 Msa1030960:intron 30.0%
! AAGTCCAATTTTCTGTAGAA+CGG + chr7_1:65222374-65222393 Msa1030960:intron 30.0%
TATTCCGTTCTACAGAAAAT+TGG - chr7_1:65222381-65222400 None:intergenic 30.0%
AAGTTCAAAATACACACCAA+AGG - chr7_1:65222499-65222518 None:intergenic 30.0%
AACTGCTTAATGGAAAATTG+TGG - chr7_1:65222684-65222703 None:intergenic 30.0%
ACAGAATAAGAACTGCTTAA+TGG - chr7_1:65222694-65222713 None:intergenic 30.0%
TTATTCTGTAGAGGTAAGAA+TGG + chr7_1:65222705-65222724 Msa1030960:intron 30.0%
TAAAAACTTTGCACCAAACA+TGG + chr7_1:65222730-65222749 Msa1030960:intron 30.0%
AGTAAGTTACTTCCTATGAA+AGG - chr7_1:65222832-65222851 None:intergenic 30.0%
!!! GATCTTGTTTTGACATATTG+AGG + chr7_1:65222877-65222896 Msa1030960:intron 30.0%
TATTAATGAACGGCTTTCAT+CGG - chr7_1:65222966-65222985 None:intergenic 30.0%
TATCTCACCTTATATGCTAA+TGG + chr7_1:65223037-65223056 Msa1030960:exon 30.0%
! AGGACTAAACGAAAGAATTT+TGG + chr7_1:65223128-65223147 Msa1030960:CDS 30.0%
AATCTCACATTTCTGTTGAA+TGG + chr7_1:65223180-65223199 Msa1030960:CDS 30.0%
ATCTCACATTTCTGTTGAAT+GGG + chr7_1:65223181-65223200 Msa1030960:CDS 30.0%
! ATTGTCTTTTGTGAAACCTT+TGG + chr7_1:65223453-65223472 Msa1030960:intron 30.0%
TTGGAAACCCTTTCTTAAAA+TGG + chr7_1:65223594-65223613 Msa1030960:CDS 30.0%
AGCTCATGGAAAATATTTAG+TGG - chr7_1:65223672-65223691 None:intergenic 30.0%
!!! AACATTCATTTTAGAGCTCA+TGG - chr7_1:65223686-65223705 None:intergenic 30.0%
!! TGAGCTCTAAAATGAATGTT+AGG + chr7_1:65223686-65223705 Msa1030960:intron 30.0%
!!! GCAAAATTTGGTTTTAGTCT+TGG - chr7_1:65223767-65223786 None:intergenic 30.0%
! GTTTTCGGTTCTTGTAAAAT+AGG - chr7_1:65223789-65223808 None:intergenic 30.0%
!!! TTACTGATTTCAGATTTTGG+AGG + chr7_1:65223815-65223834 Msa1030960:intron 30.0%
CTATACATATTCTCAACTCT+TGG + chr7_1:65224014-65224033 Msa1030960:intron 30.0%
AATTTCTCAATTCTCTTCAG+TGG + chr7_1:65224238-65224257 Msa1030960:intron 30.0%
ATTTCTCAATTCTCTTCAGT+GGG + chr7_1:65224239-65224258 Msa1030960:intron 30.0%
AGATGATATGCCATAACATT+AGG - chr7_1:65224267-65224286 None:intergenic 30.0%
TGCATATTACCATTCATTTG+TGG - chr7_1:65224401-65224420 None:intergenic 30.0%
AATGGTAATATGCATTTGCA+GGG + chr7_1:65224407-65224426 Msa1030960:intron 30.0%
TCATGGTAAACAATCATATC+TGG - chr7_1:65224462-65224481 None:intergenic 30.0%
!! GATTCAGATCTTGTTTCTTT+TGG + chr7_1:65224570-65224589 Msa1030960:intron 30.0%
TTATCATTTGGCAGTATGAT+TGG + chr7_1:65224616-65224635 Msa1030960:intron 30.0%
TGGATTTCTAATTAAGCTGA+AGG + chr7_1:65224636-65224655 Msa1030960:CDS 30.0%
! TTTGGTAGAATTTCCTTTTC+TGG - chr7_1:65224685-65224704 None:intergenic 30.0%
ATGTCAAACCTCAGAATATT+TGG - chr7_1:65224703-65224722 None:intergenic 30.0%
!! ATATTCTGAGGTTTGACATT+TGG + chr7_1:65224704-65224723 Msa1030960:intron 30.0%
ACGTCCTTGTCATAAAATTA+TGG - chr7_1:65224805-65224824 None:intergenic 30.0%
TACTTACGTACTTACATAGA+TGG + chr7_1:65224846-65224865 Msa1030960:intron 30.0%
GAAAAGAAAATGGTCAAACT+TGG + chr7_1:65225082-65225101 Msa1030960:CDS 30.0%
ATCTATAACAAGTAGGTACA+TGG + chr7_1:65225380-65225399 Msa1030960:intron 30.0%
AATTTAGCATCAAATACCTC+AGG - chr7_1:65225438-65225457 None:intergenic 30.0%
ATGCTAAATTGATAGAAACC+TGG + chr7_1:65225448-65225467 Msa1030960:intron 30.0%
CTAAGTATTTAAGGGGAATT+GGG - chr7_1:65225567-65225586 None:intergenic 30.0%
TCTAAGTATTTAAGGGGAAT+TGG - chr7_1:65225568-65225587 None:intergenic 30.0%
GAGCTATCTAAGTATTTAAG+GGG - chr7_1:65225574-65225593 None:intergenic 30.0%
GAGAGCTATCTAAGTATTTA+AGG - chr7_1:65225576-65225595 None:intergenic 30.0%
CTATTAATATGAGAGGATGA+GGG - chr7_1:65225598-65225617 None:intergenic 30.0%
ATGTTGCCTATTAATATGAG+AGG - chr7_1:65225605-65225624 None:intergenic 30.0%
ACTATATATCTTCTACTGGA+TGG + chr7_1:65225756-65225775 Msa1030960:intron 30.0%
AGGTAAACCAAGAAATATGA+TGG + chr7_1:65225908-65225927 Msa1030960:CDS 30.0%
TTTATGCTTAATAATGTGGG+AGG + chr7_1:65225939-65225958 Msa1030960:CDS 30.0%
GATAACATTCATGCTAATGA+CGG + chr7_1:65225993-65226012 Msa1030960:CDS 30.0%
ATCTCTGAACAATACTGAAT+TGG + chr7_1:65226060-65226079 Msa1030960:intron 30.0%
TGAACAATACTGAATTGGTA+GGG + chr7_1:65226065-65226084 Msa1030960:intron 30.0%
! TAGTGCTACTAAGTAATTAG+AGG + chr7_1:65226122-65226141 Msa1030960:intron 30.0%
! AGTGCTACTAAGTAATTAGA+GGG + chr7_1:65226123-65226142 Msa1030960:intron 30.0%
TGTTGTCTCATCATAAAAGA+AGG - chr7_1:65226351-65226370 None:intergenic 30.0%
CAGAATTATTAGCATCTCTA+AGG + chr7_1:65226396-65226415 Msa1030960:intron 30.0%
! TAGTACTCTTAACTGTGTTT+TGG + chr7_1:65226509-65226528 Msa1030960:CDS 30.0%
! AGTACTCTTAACTGTGTTTT+GGG + chr7_1:65226510-65226529 Msa1030960:CDS 30.0%
AATAACAATTCGTCAGAAGT+AGG - chr7_1:65226627-65226646 None:intergenic 30.0%
TCTAGTAAGCAAAGCAATAA+TGG - chr7_1:65226674-65226693 None:intergenic 30.0%
! TAAATCAAATGTACTGGTAG+AGG + chr7_1:65226818-65226837 Msa1030960:CDS 30.0%
! TCACTGCTAGGAAATTTTAA+TGG - chr7_1:65226863-65226882 None:intergenic 30.0%
CATCCTGTATGGAAAATTAA+TGG - chr7_1:65226997-65227016 None:intergenic 30.0%
GTTGTGATAAGAATTATGGA+GGG - chr7_1:65227131-65227150 None:intergenic 30.0%
TGTTGTGATAAGAATTATGG+AGG - chr7_1:65227132-65227151 None:intergenic 30.0%
TTACCAAATCTATATCCAAG+CGG - chr7_1:65227171-65227190 None:intergenic 30.0%
TTCAACGATTATGAAATGTC+AGG + chr7_1:65227240-65227259 Msa1030960:CDS 30.0%
TCTCCAAATCTATATGTAAG+TGG - chr7_1:65227378-65227397 None:intergenic 30.0%
GTACACAATTGAACATTCAA+TGG + chr7_1:65227432-65227451 Msa1030960:CDS 30.0%
AGTATCATTATACGAGAAAG+GGG - chr7_1:65227494-65227513 None:intergenic 30.0%
CAGTATCATTATACGAGAAA+GGG - chr7_1:65227495-65227514 None:intergenic 30.0%
ACAGTATCATTATACGAGAA+AGG - chr7_1:65227496-65227515 None:intergenic 30.0%
GTGATAAGATTTATTAACGG+AGG - chr7_1:65227539-65227558 None:intergenic 30.0%
ATTCAAGGATTATGAACTCT+CGG + chr7_1:65227650-65227669 Msa1030960:CDS 30.0%
! TCTTGGTGTAAATTAGATTC+TGG - chr7_1:65227838-65227857 None:intergenic 30.0%
ATCATGAACAAAAAAGAGCT+GGG + chr7_1:65227980-65227999 Msa1030960:CDS 30.0%
! ATATTACCTGATACGTTTTC+TGG - chr7_1:65228132-65228151 None:intergenic 30.0%
GGTAATATTTATTCTGACAC+AGG + chr7_1:65228144-65228163 Msa1030960:CDS 30.0%
CTGCAAGAAATATTACTGAT+TGG + chr7_1:65228199-65228218 Msa1030960:CDS 30.0%
GTATTAATGTGAGATTGAGA+GGG - chr7_1:65228252-65228271 None:intergenic 30.0%
CAATATAACCAATTACGTTC+AGG + chr7_1:65228414-65228433 Msa1030960:CDS 30.0%
!! TTTAAAGTAGGATTTTGAGG+AGG - chr7_1:65228624-65228643 None:intergenic 30.0%
ATCAAATAGGATCATACTTG+AGG + chr7_1:65228646-65228665 Msa1030960:CDS 30.0%
!!! AACATAGTTAGTTTTGTGAC+TGG + chr7_1:65228700-65228719 Msa1030960:three_prime_UTR 30.0%
CTAACATCTAGATATGTACA+TGG - chr7_1:65228790-65228809 None:intergenic 30.0%
TATCTAGATGTTAGATGTGT+TGG + chr7_1:65228796-65228815 Msa1030960:three_prime_UTR 30.0%
!! CTTGAAAATTCAGGTTGATA+GGG + chr7_1:65228839-65228858 Msa1030960:three_prime_UTR 30.0%
! TCTCAAATTCAAGTGTTGTG+TGG + chr7_1:65221611-65221630 Msa1030960:five_prime_UTR 35.0%
CCCAATACGAAGAAAAACAT+TGG - chr7_1:65221851-65221870 None:intergenic 35.0%
! TTTTTCTTCGTATTGGGAGT+GGG + chr7_1:65221854-65221873 Msa1030960:intron 35.0%
TTGGAAGAGATGAAATAGTG+TGG + chr7_1:65221986-65222005 Msa1030960:intron 35.0%
TGGAAGAGATGAAATAGTGT+GGG + chr7_1:65221987-65222006 Msa1030960:intron 35.0%
AGAACAAACTCCCAATGAAA+AGG + chr7_1:65222071-65222090 Msa1030960:intron 35.0%
GAACAAACTCCCAATGAAAA+GGG + chr7_1:65222072-65222091 Msa1030960:intron 35.0%
CTGGAGCATAAATTCAACAA+TGG - chr7_1:65222154-65222173 None:intergenic 35.0%
TCACTAAAAACACAGAATGC+TGG - chr7_1:65222173-65222192 None:intergenic 35.0%
GTTCTACAGAAAATTGGACT+TGG - chr7_1:65222375-65222394 None:intergenic 35.0%
GATAATGTAGGTGACCTAAT+AGG + chr7_1:65222414-65222433 Msa1030960:intron 35.0%
TTCAACTATAGTCGCCTATT+AGG - chr7_1:65222431-65222450 None:intergenic 35.0%
AAGCAGTTCTTATTCTGTAG+AGG + chr7_1:65222696-65222715 Msa1030960:intron 35.0%
GCTTAGTTGAATCCTTTCAT+AGG + chr7_1:65222817-65222836 Msa1030960:intron 35.0%
!!! TGTTTTGACATATTGAGGCA+TGG + chr7_1:65222882-65222901 Msa1030960:intron 35.0%
GGCTGTTCACTATTAATGAA+CGG - chr7_1:65222976-65222995 None:intergenic 35.0%
TTCATTAATAGTGAACAGCC+TGG + chr7_1:65222976-65222995 Msa1030960:five_prime_UTR 35.0%
CAAGTATGAAGAAAAACACC+AGG - chr7_1:65222997-65223016 None:intergenic 35.0%
TCAACAGCCATTAGCATATA+AGG - chr7_1:65223047-65223066 None:intergenic 35.0%
ATGTTTAGATCACTTTGCAC+TGG - chr7_1:65223158-65223177 None:intergenic 35.0%
CAACATGATTGTTACCTCAT+AGG - chr7_1:65223372-65223391 None:intergenic 35.0%
TTTCTTAAGCAGTTTCTTCC+TGG + chr7_1:65223515-65223534 Msa1030960:CDS 35.0%
AATTCCTGGACAACTTGATT+TGG - chr7_1:65223551-65223570 None:intergenic 35.0%
TCTGGAGATGAATTTCACTT+TGG + chr7_1:65223575-65223594 Msa1030960:CDS 35.0%
!! CAATGAATTAACTCTAGAGC+TGG - chr7_1:65223992-65224011 None:intergenic 35.0%
!!! TACAGAACCACTGTCATTTT+AGG - chr7_1:65224114-65224133 None:intergenic 35.0%
CTTACCCAAATGCAATACTT+TGG + chr7_1:65224142-65224161 Msa1030960:intron 35.0%
!! CAGACCAAAGTATTGCATTT+GGG - chr7_1:65224149-65224168 None:intergenic 35.0%
!! ACTTTAGAGCCACAAATGAA+TGG + chr7_1:65224389-65224408 Msa1030960:intron 35.0%
GAATGGTAATATGCATTTGC+AGG + chr7_1:65224406-65224425 Msa1030960:intron 35.0%
ATGGTAATATGCATTTGCAG+GGG + chr7_1:65224408-65224427 Msa1030960:intron 35.0%
! CAGCTTTTAGATGTTTCTCA+TGG - chr7_1:65224479-65224498 None:intergenic 35.0%
AGAAACAAGATCTGAATCCA+CGG - chr7_1:65224568-65224587 None:intergenic 35.0%
!! AGATCTTGTTTCTTTTGGCA+TGG + chr7_1:65224575-65224594 Msa1030960:intron 35.0%
TTCTAATTAAGCTGAAGGAG+AGG + chr7_1:65224641-65224660 Msa1030960:CDS 35.0%
! TTCCTTTTCTGGATTTTTGC+AGG - chr7_1:65224674-65224693 None:intergenic 35.0%
!! CAGAAGTATTGAGTAATGAC+AGG + chr7_1:65224773-65224792 Msa1030960:intron 35.0%
!! TACGTAAGTATTGAAAGCAC+AGG - chr7_1:65224836-65224855 None:intergenic 35.0%
! TCAAATCTGAGATGAATCTG+AGG + chr7_1:65224910-65224929 Msa1030960:intron 35.0%
TAGCTAGACAAAAACTAGAG+TGG - chr7_1:65224948-65224967 None:intergenic 35.0%
TGCCTACATTGGTAGATAAA+AGG + chr7_1:65224969-65224988 Msa1030960:intron 35.0%
GCCTACATTGGTAGATAAAA+GGG + chr7_1:65224970-65224989 Msa1030960:intron 35.0%
! ACCCTTTTATCTACCAATGT+AGG - chr7_1:65224974-65224993 None:intergenic 35.0%
TTCAGAGATGATGATCATGA+TGG + chr7_1:65225110-65225129 Msa1030960:CDS 35.0%
TCAGAGATGATGATCATGAT+GGG + chr7_1:65225111-65225130 Msa1030960:CDS 35.0%
TGACATCCAAATTTCCTCAA+TGG + chr7_1:65225190-65225209 Msa1030960:CDS 35.0%
GACATCCAAATTTCCTCAAT+GGG + chr7_1:65225191-65225210 Msa1030960:CDS 35.0%
TGAAGGTTGCTTCAGATATT+TGG + chr7_1:65225277-65225296 Msa1030960:intron 35.0%
ACATGGCATATGTTGTATCA+AGG + chr7_1:65225397-65225416 Msa1030960:intron 35.0%
GAGGAAGTAATTAATTCCTG+AGG + chr7_1:65225419-65225438 Msa1030960:intron 35.0%
!!! CGTGTATTCTGTTTTAGTAC+TGG - chr7_1:65225505-65225524 None:intergenic 35.0%
! AGAATACACGCAGTAGTTTT+GGG + chr7_1:65225515-65225534 Msa1030960:intron 35.0%
CCTATTAATATGAGAGGATG+AGG - chr7_1:65225599-65225618 None:intergenic 35.0%
CCTCATCCTCTCATATTAAT+AGG + chr7_1:65225596-65225615 Msa1030960:intron 35.0%
CTCAACTAACCTAACAAACT+AGG + chr7_1:65225650-65225669 Msa1030960:intron 35.0%
TGGCACTATATATCTTCTAC+TGG + chr7_1:65225752-65225771 Msa1030960:intron 35.0%
TATTGTTCAGAGATTCGAGA+GGG - chr7_1:65226054-65226073 None:intergenic 35.0%
CTGAACAATACTGAATTGGT+AGG + chr7_1:65226064-65226083 Msa1030960:intron 35.0%
GAACAATACTGAATTGGTAG+GGG + chr7_1:65226066-65226085 Msa1030960:intron 35.0%
! GTCTTGGTAATCTGAAACAT+GGG - chr7_1:65226438-65226457 None:intergenic 35.0%
!! CGAACTTGTTAAGAGTTTGA+AGG + chr7_1:65226464-65226483 Msa1030960:CDS 35.0%
GTTGCACATGAAAGTTATCA+AGG - chr7_1:65226539-65226558 None:intergenic 35.0%
!! AGCATTGGTTAGTAATGTTG+AGG + chr7_1:65226601-65226620 Msa1030960:intron 35.0%
! TCTGACGAATTGTTATTGCA+TGG + chr7_1:65226630-65226649 Msa1030960:intron 35.0%
TAGCATAATAGTGGCCATTA+AGG + chr7_1:65226953-65226972 Msa1030960:intron 35.0%
CAAAACATCATCATCCTGTA+TGG - chr7_1:65227008-65227027 None:intergenic 35.0%
TGTTAATAACCAGTCTAGCT+TGG + chr7_1:65227066-65227085 Msa1030960:CDS 35.0%
TGATAAGAATTATGGAGGGA+CGG - chr7_1:65227127-65227146 None:intergenic 35.0%
CGCTGTTGTGATAAGAATTA+TGG - chr7_1:65227135-65227154 None:intergenic 35.0%
GATGCTTCACATAACAAAAC+TGG + chr7_1:65227214-65227233 Msa1030960:CDS 35.0%
TGATAAGAATTGTCGAGAGA+CGG - chr7_1:65227334-65227353 None:intergenic 35.0%
CCAAATCTATATGTAAGTGG+TGG - chr7_1:65227375-65227394 None:intergenic 35.0%
CCACCACTTACATATAGATT+TGG + chr7_1:65227372-65227391 Msa1030960:CDS 35.0%
TTCAATGGTTATGAACTCTC+AGG + chr7_1:65227447-65227466 Msa1030960:CDS 35.0%
TATTAACGGAGGAATTCTCT+GGG - chr7_1:65227528-65227547 None:intergenic 35.0%
TTATTAACGGAGGAATTCTC+TGG - chr7_1:65227529-65227548 None:intergenic 35.0%
GTTCATAATCCTTGAATGCT+CGG - chr7_1:65227647-65227666 None:intergenic 35.0%
TTCAAGGATTATGAACTCTC+GGG + chr7_1:65227651-65227670 Msa1030960:CDS 35.0%
TAGATTCTGGACCAATCATT+CGG - chr7_1:65227825-65227844 None:intergenic 35.0%
ACACCAAGAAAACATTGGTA+AGG + chr7_1:65227849-65227868 Msa1030960:CDS 35.0%
! ACTCCTTACCAATGTTTTCT+TGG - chr7_1:65227855-65227874 None:intergenic 35.0%
CATCATGAACAAAAAAGAGC+TGG + chr7_1:65227979-65227998 Msa1030960:CDS 35.0%
GCTTCAAACGATATTCCAAT+GGG + chr7_1:65228015-65228034 Msa1030960:CDS 35.0%
CTTCAAACGATATTCCAATG+GGG + chr7_1:65228016-65228035 Msa1030960:CDS 35.0%
TTTGCAAACGTCTCTAACAT+TGG + chr7_1:65228071-65228090 Msa1030960:CDS 35.0%
GTAATATTTCTTGCAGCTAG+TGG - chr7_1:65228195-65228214 None:intergenic 35.0%
GGTATTAATGTGAGATTGAG+AGG - chr7_1:65228253-65228272 None:intergenic 35.0%
AGGCTGACCAATGAAATTAT+CGG - chr7_1:65228274-65228293 None:intergenic 35.0%
ATAATTTCATTGGTCAGCCT+TGG + chr7_1:65228274-65228293 Msa1030960:CDS 35.0%
! TGTGTCTGATTGACTCATAA+GGG - chr7_1:65228443-65228462 None:intergenic 35.0%
! TAATCTAGTGGATGAGAAGA+TGG - chr7_1:65228540-65228559 None:intergenic 35.0%
CATCCACTAGATTATTTCAG+TGG + chr7_1:65228546-65228565 Msa1030960:CDS 35.0%
!! GCTTGAAAATTCAGGTTGAT+AGG + chr7_1:65228838-65228857 Msa1030960:three_prime_UTR 35.0%
!! GCTCTCTCAACCGTTATTTT+CGG - chr7_1:65221557-65221576 None:intergenic 40.0%
GGGCAATTTGGGGATTATAA+TGG - chr7_1:65221647-65221666 None:intergenic 40.0%
GGAAAGTGGAAAACGAAGTA+AGG - chr7_1:65221715-65221734 None:intergenic 40.0%
ATTACCGGTGAAATTGTAGG+CGG - chr7_1:65221746-65221765 None:intergenic 40.0%
! GTTTTTCTTCGTATTGGGAG+TGG + chr7_1:65221853-65221872 Msa1030960:intron 40.0%
ATGAAATAGTGTGGGTCGTA+TGG + chr7_1:65221995-65222014 Msa1030960:intron 40.0%
! ATATGACATGTGGGTATTGC+AGG + chr7_1:65222299-65222318 Msa1030960:intron 40.0%
TGAATGCTGAGTTCCAAGTT+CGG + chr7_1:65222521-65222540 Msa1030960:intron 40.0%
TTCCTTAACCTTGGCTTCTA+TGG + chr7_1:65222765-65222784 Msa1030960:intron 40.0%
!!! CTTTGCTTTTGGTGCTTGTT+AGG + chr7_1:65222933-65222952 Msa1030960:intron 40.0%
ATGGTTCTCCAGAGCAATAT+AGG + chr7_1:65223108-65223127 Msa1030960:CDS 40.0%
CGTTTAGTCCTATATTGCTC+TGG - chr7_1:65223119-65223138 None:intergenic 40.0%
TTTAGATCACTTTGCACTGG+TGG - chr7_1:65223155-65223174 None:intergenic 40.0%
AATGGGATGCTAATCACCAA+AGG + chr7_1:65223198-65223217 Msa1030960:CDS 40.0%
ATGGGATGCTAATCACCAAA+GGG + chr7_1:65223199-65223218 Msa1030960:CDS 40.0%
TCGTGATCAAATCTGGCAAA+TGG - chr7_1:65223272-65223291 None:intergenic 40.0%
TTTGCCAGATTTGATCACGA+TGG + chr7_1:65223272-65223291 Msa1030960:CDS 40.0%
ATGTCCATCGTGATCAAATC+TGG - chr7_1:65223279-65223298 None:intergenic 40.0%
! GCCATGCCTGAAGAAATTTT+TGG + chr7_1:65223320-65223339 Msa1030960:CDS 40.0%
GCCAAAAATTTCTTCAGGCA+TGG - chr7_1:65223324-65223343 None:intergenic 40.0%
TCCAGGCCAAAAATTTCTTC+AGG - chr7_1:65223329-65223348 None:intergenic 40.0%
GCACTTCACTTAAACTATCC+AGG - chr7_1:65223346-65223365 None:intergenic 40.0%
! AAGTGAAGTGCTTTCCTATG+AGG + chr7_1:65223355-65223374 Msa1030960:CDS 40.0%
! TCTTTTGTGAAACCTTTGGC+AGG + chr7_1:65223457-65223476 Msa1030960:intron 40.0%
GTTGTCCAGGAATTACTTTC+TGG + chr7_1:65223557-65223576 Msa1030960:CDS 40.0%
CATCTCCAGAAAGTAATTCC+TGG - chr7_1:65223565-65223584 None:intergenic 40.0%
ATCAACAATGCTGTTACACG+TGG + chr7_1:65223964-65223983 Msa1030960:intron 40.0%
TCAACTCTTGGTATCCAACT+TGG + chr7_1:65224026-65224045 Msa1030960:intron 40.0%
!! CCAGACCAAAGTATTGCATT+TGG - chr7_1:65224150-65224169 None:intergenic 40.0%
CCAAATGCAATACTTTGGTC+TGG + chr7_1:65224147-65224166 Msa1030960:intron 40.0%
! TCAGTGGGTTCCTAATGTTA+TGG + chr7_1:65224254-65224273 Msa1030960:intron 40.0%
!! CATGCACAGTTATTTTACCG+TGG + chr7_1:65224548-65224567 Msa1030960:intron 40.0%
TAATTAAGCTGAAGGAGAGG+TGG + chr7_1:65224644-65224663 Msa1030960:CDS 40.0%
AATTAAGCTGAAGGAGAGGT+GGG + chr7_1:65224645-65224664 Msa1030960:CDS 40.0%
GACCTGCAAAAATCCAGAAA+AGG + chr7_1:65224669-65224688 Msa1030960:CDS 40.0%
TACTTCTGTTCGAAAGAGTG+TGG - chr7_1:65224761-65224780 None:intergenic 40.0%
TGTCTAGCTAATGCCTACAT+TGG + chr7_1:65224958-65224977 Msa1030960:intron 40.0%
! ACAAGCTTTTTGCTTTGTGC+AGG + chr7_1:65225042-65225061 Msa1030960:intron 40.0%
! GATGAAGAGGAGAAAGCATA+CGG + chr7_1:65225167-65225186 Msa1030960:CDS 40.0%
CTTGTCCCATTGAGGAAATT+TGG - chr7_1:65225199-65225218 None:intergenic 40.0%
CAAATTTCCTCAATGGGACA+AGG + chr7_1:65225197-65225216 Msa1030960:CDS 40.0%
AAGGCAATGAGCTTCAAAGA+AGG + chr7_1:65225216-65225235 Msa1030960:CDS 40.0%
TGGCATATGTTGTATCAAGG+AGG + chr7_1:65225400-65225419 Msa1030960:intron 40.0%
! CAGAATACACGCAGTAGTTT+TGG + chr7_1:65225514-65225533 Msa1030960:intron 40.0%
!! GAATACACGCAGTAGTTTTG+GGG + chr7_1:65225516-65225535 Msa1030960:intron 40.0%
!!! AATACACGCAGTAGTTTTGG+GGG + chr7_1:65225517-65225536 Msa1030960:intron 40.0%
TTAAGGGGAATTGGGTCTTT+GGG - chr7_1:65225559-65225578 None:intergenic 40.0%
TTTAAGGGGAATTGGGTCTT+TGG - chr7_1:65225560-65225579 None:intergenic 40.0%
!! AGGTAGTTGCCTAGTTTGTT+AGG - chr7_1:65225662-65225681 None:intergenic 40.0%
CTTGGCGAAGACTTCAATAA+AGG + chr7_1:65225888-65225907 Msa1030960:CDS 40.0%
GCTGAAGCCATCATATTTCT+TGG - chr7_1:65225918-65225937 None:intergenic 40.0%
! TGTAGTTTGCCTCCTTTCTT+GGG - chr7_1:65225969-65225988 None:intergenic 40.0%
GTATTGTTCAGAGATTCGAG+AGG - chr7_1:65226055-65226074 None:intergenic 40.0%
! CGTCTTGGTAATCTGAAACA+TGG - chr7_1:65226439-65226458 None:intergenic 40.0%
!! GGTATCATCTAAAAGCATCC+CGG + chr7_1:65226485-65226504 Msa1030960:CDS 40.0%
!! ACACAGTTAAGAGTACTAGC+CGG - chr7_1:65226507-65226526 None:intergenic 40.0%
AGAAGAACTTGCATGAGCAT+TGG + chr7_1:65226586-65226605 Msa1030960:CDS 40.0%
TCCAGTTTGCATATGATGCA+GGG - chr7_1:65226740-65226759 None:intergenic 40.0%
CTATTATGCTACATGAGGCA+AGG - chr7_1:65226944-65226963 None:intergenic 40.0%
TGCCTCATGTAGCATAATAG+TGG + chr7_1:65226944-65226963 Msa1030960:intron 40.0%
!! GATGATGATGTTTTGAGCAC+AGG + chr7_1:65227013-65227032 Msa1030960:CDS 40.0%
GATAAGAATTATGGAGGGAC+GGG - chr7_1:65227126-65227145 None:intergenic 40.0%
AAATGTCAGGATGATCCCAT+CGG + chr7_1:65227253-65227272 Msa1030960:CDS 40.0%
GAATCTTCATCGGATGAGAA+AGG - chr7_1:65227289-65227308 None:intergenic 40.0%
GATAAGAATTGTCGAGAGAC+GGG - chr7_1:65227333-65227352 None:intergenic 40.0%
CTCGACAATTCTTATCACAG+CGG + chr7_1:65227337-65227356 Msa1030960:CDS 40.0%
ATCTTATCACAGCGATGATG+AGG + chr7_1:65227549-65227568 Msa1030960:CDS 40.0%
CCAAATCTATATGAAAGGGG+TGG - chr7_1:65227579-65227598 None:intergenic 40.0%
CCACCCCTTTCATATAGATT+TGG + chr7_1:65227576-65227595 Msa1030960:CDS 40.0%
AGAACAAAACCGAGCATTCA+AGG + chr7_1:65227635-65227654 Msa1030960:CDS 40.0%
ATTTACCAGTGATAGCCTGT+TGG - chr7_1:65227776-65227795 None:intergenic 40.0%
! TCATTCGGGTTTGTCTATCT+TGG - chr7_1:65227810-65227829 None:intergenic 40.0%
GATAGACAAACCCGAATGAT+TGG + chr7_1:65227811-65227830 Msa1030960:CDS 40.0%
AGATTCTGGACCAATCATTC+GGG - chr7_1:65227824-65227843 None:intergenic 40.0%
TTGGTAAGGAGTTGTTACAC+AGG + chr7_1:65227863-65227882 Msa1030960:CDS 40.0%
TTACACAGGAAGTCAGATGA+TGG + chr7_1:65227877-65227896 Msa1030960:CDS 40.0%
AAGAGCTGGGTTAAATTTCC+AGG + chr7_1:65227993-65228012 Msa1030960:CDS 40.0%
! TTGGAATATCGTTTGAAGCC+TGG - chr7_1:65228014-65228033 None:intergenic 40.0%
GGCTTCAAACGATATTCCAA+TGG + chr7_1:65228014-65228033 Msa1030960:CDS 40.0%
AACGATATTCCAATGGGGAA+TGG + chr7_1:65228021-65228040 Msa1030960:CDS 40.0%
TAAAATTGGCCATTCCCCAT+TGG - chr7_1:65228033-65228052 None:intergenic 40.0%
ACGTCTCTAACATTGGATCA+AGG + chr7_1:65228078-65228097 Msa1030960:CDS 40.0%
TAACATTGGATCAAGGTCAG+AGG + chr7_1:65228085-65228104 Msa1030960:CDS 40.0%
TTCATGCCAGAAAACGTATC+AGG + chr7_1:65228123-65228142 Msa1030960:CDS 40.0%
TCTTCAGACCAGCAAATTCA+GGG + chr7_1:65228300-65228319 Msa1030960:CDS 40.0%
AGTCTATTTAGTCAGAGCCT+TGG + chr7_1:65228348-65228367 Msa1030960:CDS 40.0%
AAGGGTTACCTGAACGTAAT+TGG - chr7_1:65228425-65228444 None:intergenic 40.0%
! GTGTGTCTGATTGACTCATA+AGG - chr7_1:65228444-65228463 None:intergenic 40.0%
TCTACTACTCCATAGGTTCT+GGG - chr7_1:65228483-65228502 None:intergenic 40.0%
ATCTACTACTCCATAGGTTC+TGG - chr7_1:65228484-65228503 None:intergenic 40.0%
TAGTAGATGCAGGTACACAT+AGG + chr7_1:65228496-65228515 Msa1030960:CDS 40.0%
CGTCCACTGAAATAATCTAG+TGG - chr7_1:65228552-65228571 None:intergenic 40.0%
CTCATCCATGTCATATCATC+AGG - chr7_1:65228597-65228616 None:intergenic 40.0%
ATCCACAAAAGGGATGAGAT+AGG + chr7_1:65228729-65228748 Msa1030960:three_prime_UTR 40.0%
! AACCTATCTCATCCCTTTTG+TGG - chr7_1:65228734-65228753 None:intergenic 40.0%
!! ACATGGTGTTAAGTTGAGCA+TGG - chr7_1:65228773-65228792 None:intergenic 40.0%
GTGGGTAAGCTTGAAAATTC+AGG + chr7_1:65228830-65228849 Msa1030960:three_prime_UTR 40.0%
AGAGAGAGAGAGTGAGTATG+TGG - chr7_1:65221584-65221603 None:intergenic 45.0%
AACCTAAGAGCGAGTGTGAA+GGG - chr7_1:65221667-65221686 None:intergenic 45.0%
TAACCTAAGAGCGAGTGTGA+AGG - chr7_1:65221668-65221687 None:intergenic 45.0%
GTAAGGAATGAGATTGAGCG+AGG - chr7_1:65221698-65221717 None:intergenic 45.0%
! ACAAAACTCACCGCATTGAC+AGG - chr7_1:65221821-65221840 None:intergenic 45.0%
AAATAGTGTGGGTCGTATGG+CGG + chr7_1:65221998-65222017 Msa1030960:intron 45.0%
CACCATAGAAGCCAAGGTTA+AGG - chr7_1:65222770-65222789 None:intergenic 45.0%
CCAATTCACCATAGAAGCCA+AGG - chr7_1:65222776-65222795 None:intergenic 45.0%
CCTTGGCTTCTATGGTGAAT+TGG + chr7_1:65222773-65222792 Msa1030960:intron 45.0%
GCAATTAAATGGTGCAAGCC+TGG + chr7_1:65223079-65223098 Msa1030960:CDS 45.0%
CTGGAGAACCATAACTAACC+AGG - chr7_1:65223100-65223119 None:intergenic 45.0%
TCACGATGGACATGAAGTCT+TGG + chr7_1:65223286-65223305 Msa1030960:CDS 45.0%
!!! GCCTGAAGAAATTTTTGGCC+TGG + chr7_1:65223325-65223344 Msa1030960:CDS 45.0%
TGTGAAACCTTTGGCAGGTT+TGG + chr7_1:65223462-65223481 Msa1030960:intron 45.0%
GTGTATTCCAAACCTGCCAA+AGG - chr7_1:65223472-65223491 None:intergenic 45.0%
!! TGATTTGGCTCTAAGTCACC+AGG - chr7_1:65223536-65223555 None:intergenic 45.0%
! AGAGCCAAATCAAGTTGTCC+AGG + chr7_1:65223544-65223563 Msa1030960:CDS 45.0%
AGTGGAGTCACATGCTAACA+AGG - chr7_1:65223654-65223673 None:intergenic 45.0%
CAATGTGAGTCTAGCCAAGT+TGG - chr7_1:65224043-65224062 None:intergenic 45.0%
GGACATGCCTAAAATGACAG+TGG + chr7_1:65224104-65224123 Msa1030960:intron 45.0%
GGGAATGTTACAGTGACATC+CGG + chr7_1:65225131-65225150 Msa1030960:CDS 45.0%
GGAATGTTACAGTGACATCC+GGG + chr7_1:65225132-65225151 Msa1030960:CDS 45.0%
TTCATCCCAGGAATATGACC+CGG - chr7_1:65225153-65225172 None:intergenic 45.0%
GTCATATTCCTGGGATGAAG+AGG + chr7_1:65225154-65225173 Msa1030960:CDS 45.0%
! ATACTGGACGGCTTTAGTGA+AGG + chr7_1:65225260-65225279 Msa1030960:intron 45.0%
AACATTCTGCGTCAGAAGTG+AGG - chr7_1:65225682-65225701 None:intergenic 45.0%
ATGGATGTCTTGCTTAGCTG+TGG + chr7_1:65225775-65225794 Msa1030960:intron 45.0%
! ATGATGTTTGACAGGGTGCT+TGG + chr7_1:65225870-65225889 Msa1030960:intron 45.0%
! GTGTAGTTTGCCTCCTTTCT+TGG - chr7_1:65225970-65225989 None:intergenic 45.0%
GAAAGGAGGCAAACTACACA+AGG + chr7_1:65225971-65225990 Msa1030960:CDS 45.0%
!! CACAGTTAAGAGTACTAGCC+GGG - chr7_1:65226506-65226525 None:intergenic 45.0%
TCCCTGCATCATATGCAAAC+TGG + chr7_1:65226736-65226755 Msa1030960:CDS 45.0%
GTCCAGTTTGCATATGATGC+AGG - chr7_1:65226741-65226760 None:intergenic 45.0%
ATGTATGCAAGCTCACTGCT+AGG - chr7_1:65226875-65226894 None:intergenic 45.0%
GGCCACTATTATGCTACATG+AGG - chr7_1:65226949-65226968 None:intergenic 45.0%
CTTCATCTTCCAAGCTAGAC+TGG - chr7_1:65227078-65227097 None:intergenic 45.0%
CCAAATCTATATCCAAGCGG+TGG - chr7_1:65227168-65227187 None:intergenic 45.0%
CCACCGCTTGGATATAGATT+TGG + chr7_1:65227165-65227184 Msa1030960:CDS 45.0%
AACTCTCGGGATGATTCCAT+CGG + chr7_1:65227664-65227683 Msa1030960:CDS 45.0%
ATCGGTGAAGGATCATCTGA+GGG + chr7_1:65227682-65227701 Msa1030960:CDS 45.0%
! AAGTCAGATGATGGTCCCTT+CGG + chr7_1:65227886-65227905 Msa1030960:CDS 45.0%
!! TGGCTTTGGTAAGAACCGAA+GGG - chr7_1:65227904-65227923 None:intergenic 45.0%
TACCAAAGCCAGGAGCAAAT+TGG + chr7_1:65227913-65227932 Msa1030960:CDS 45.0%
! GAATCAAGCCAATTTGCTCC+TGG - chr7_1:65227924-65227943 None:intergenic 45.0%
CTTGATTCAGTCCCTCATCA+AGG + chr7_1:65227936-65227955 Msa1030960:CDS 45.0%
AATCCCGTTGTCCTTGATGA+GGG - chr7_1:65227950-65227969 None:intergenic 45.0%
CAGGAAGTTACTTAATCCCC+AGG + chr7_1:65228163-65228182 Msa1030960:CDS 45.0%
CTCTTCAGACCAGCAAATTC+AGG + chr7_1:65228299-65228318 Msa1030960:CDS 45.0%
ATTTAGTCAGAGCCTTGGCA+CGG + chr7_1:65228353-65228372 Msa1030960:CDS 45.0%
ACCTATGGAGTAGTAGATGC+AGG + chr7_1:65228486-65228505 Msa1030960:CDS 45.0%
ACCTGCATCTACTACTCCAT+AGG - chr7_1:65228490-65228509 None:intergenic 45.0%
! TCTAGTGGATGAGAAGATGG+TGG - chr7_1:65228537-65228556 None:intergenic 45.0%
TGGTGCCTGATGATATGACA+TGG + chr7_1:65228589-65228608 Msa1030960:CDS 45.0%
TAGGATCATACTTGAGGTCG+TGG + chr7_1:65228652-65228671 Msa1030960:CDS 45.0%
ACTGGAGCAAGATCCACAAA+AGG + chr7_1:65228718-65228737 Msa1030960:three_prime_UTR 45.0%
CTGGAGCAAGATCCACAAAA+GGG + chr7_1:65228719-65228738 Msa1030960:three_prime_UTR 45.0%
TGTGTTGGAAAGAGAAAGCG+TGG + chr7_1:65228811-65228830 Msa1030960:three_prime_UTR 45.0%
! GTGTTGGAAAGAGAAAGCGT+GGG + chr7_1:65228812-65228831 Msa1030960:three_prime_UTR 45.0%
!! AGGTATCGAATGCTGAAAGC+AGG + chr7_1:65228936-65228955 Msa1030960:three_prime_UTR 45.0%
!!! AAATTATATTGTTTTAATTT+TGG - chr7_1:65221329-65221348 None:intergenic 5.0%
!! ATCATAATTAAATAAATATT+TGG - chr7_1:65221374-65221393 None:intergenic 5.0%
!!! TTTTTTAATATTTTATCTTT+AGG + chr7_1:65221784-65221803 Msa1030960:intron 5.0%
!!! TTTTTAATATTTTATCTTTA+GGG + chr7_1:65221785-65221804 Msa1030960:intron 5.0%
!!! TTTAATATTGTTTTTTTATT+TGG + chr7_1:65221967-65221986 Msa1030960:intron 5.0%
!! AAAATTATAATTTGAATATT+TGG + chr7_1:65222025-65222044 Msa1030960:intron 5.0%
CTCAGCTCCACACTTTCCTA+GGG - chr7_1:65221499-65221518 None:intergenic 50.0%
CGAGTGTGAAGGGCAATTTG+GGG - chr7_1:65221657-65221676 None:intergenic 50.0%
GCGAGTGTGAAGGGCAATTT+GGG - chr7_1:65221658-65221677 None:intergenic 50.0%
AGCGAGTGTGAAGGGCAATT+TGG - chr7_1:65221659-65221678 None:intergenic 50.0%
AAATTGTAGGCGGTGGTGAG+GGG - chr7_1:65221736-65221755 None:intergenic 50.0%
GAAATTGTAGGCGGTGGTGA+GGG - chr7_1:65221737-65221756 None:intergenic 50.0%
TGAAATTGTAGGCGGTGGTG+AGG - chr7_1:65221738-65221757 None:intergenic 50.0%
ACCACCGCCTACAATTTCAC+CGG + chr7_1:65221739-65221758 Msa1030960:five_prime_UTR 50.0%
GACTGCATGGTGAAGTTGAG+AGG + chr7_1:65222047-65222066 Msa1030960:intron 50.0%
AGAGCAAACTGCACCGAACT+TGG - chr7_1:65222537-65222556 None:intergenic 50.0%
!! AAGTTCGGTGCAGTTTGCTC+TGG + chr7_1:65222536-65222555 Msa1030960:intron 50.0%
! GGTGCAAGCCTGGTTAGTTA+TGG + chr7_1:65223089-65223108 Msa1030960:CDS 50.0%
ACCAAAGGGTTGTTGCCAAG+CGG + chr7_1:65223213-65223232 Msa1030960:CDS 50.0%
GGGAACAGATTGGCATCAGT+TGG + chr7_1:65223234-65223253 Msa1030960:CDS 50.0%
!! CAGGGGTGCTTCACTTTGTT+CGG + chr7_1:65224425-65224444 Msa1030960:intron 50.0%
!! AGGGGTGCTTCACTTTGTTC+GGG + chr7_1:65224426-65224445 Msa1030960:intron 50.0%
TGACATCCGGGTCATATTCC+TGG + chr7_1:65225144-65225163 Msa1030960:CDS 50.0%
GACATCCGGGTCATATTCCT+GGG + chr7_1:65225145-65225164 Msa1030960:CDS 50.0%
TGCTTTCTCCTCTTCATCCC+AGG - chr7_1:65225165-65225184 None:intergenic 50.0%
CTCATTGCCTTGTCCCATTG+AGG - chr7_1:65225207-65225226 None:intergenic 50.0%
ATCGCTGCTGCACTTGATAC+TGG + chr7_1:65225244-65225263 Msa1030960:intron 50.0%
CTGCTGCACTTGATACTGGA+CGG + chr7_1:65225248-65225267 Msa1030960:intron 50.0%
! AATTGGGTCTTTGGGAAGGG+AGG - chr7_1:65225551-65225570 None:intergenic 50.0%
! GGGAATTGGGTCTTTGGGAA+GGG - chr7_1:65225554-65225573 None:intergenic 50.0%
TGTCTTGCTTAGCTGTGGTC+TGG + chr7_1:65225780-65225799 Msa1030960:intron 50.0%
AACAAGTTCGTGCTGCGTCT+TGG - chr7_1:65226454-65226473 None:intergenic 50.0%
!! TGTTTTGAGCACAGGAGTCC+AGG + chr7_1:65227021-65227040 Msa1030960:CDS 50.0%
!! GTTCTCTGGGACGCTAACAA+TGG - chr7_1:65227104-65227123 None:intergenic 50.0%
AAAGGAGCTCCTTCACCGAT+GGG - chr7_1:65227271-65227290 None:intergenic 50.0%
TCAGGATGATCCCATCAGTG+AGG + chr7_1:65227465-65227484 Msa1030960:CDS 50.0%
CAGGATGATCCCATCAGTGA+GGG + chr7_1:65227466-65227485 Msa1030960:CDS 50.0%
AGGATGATCCCATCAGTGAG+GGG + chr7_1:65227467-65227486 Msa1030960:CDS 50.0%
CTCAGATGATCCTTCACCGA+TGG - chr7_1:65227683-65227702 None:intergenic 50.0%
CATCGGTGAAGGATCATCTG+AGG + chr7_1:65227681-65227700 Msa1030960:CDS 50.0%
GATCATCTGAGGGTCATGCA+TGG + chr7_1:65227692-65227711 Msa1030960:CDS 50.0%
CCTGTTGGCAGTGTAGTCAT+GGG - chr7_1:65227761-65227780 None:intergenic 50.0%
!! CTGGCTTTGGTAAGAACCGA+AGG - chr7_1:65227905-65227924 None:intergenic 50.0%
CTTCGGTTCTTACCAAAGCC+AGG + chr7_1:65227903-65227922 Msa1030960:CDS 50.0%
! AGCCAATTTGCTCCTGGCTT+TGG - chr7_1:65227918-65227937 None:intergenic 50.0%
CAGTCCCTCATCAAGGACAA+CGG + chr7_1:65227943-65227962 Msa1030960:CDS 50.0%
AGTCCCTCATCAAGGACAAC+GGG + chr7_1:65227944-65227963 Msa1030960:CDS 50.0%
CAATCCCGTTGTCCTTGATG+AGG - chr7_1:65227951-65227970 None:intergenic 50.0%
CTCATCAAGGACAACGGGAT+TGG + chr7_1:65227949-65227968 Msa1030960:CDS 50.0%
! TGCTGGTCTGAAGAGAACCA+AGG - chr7_1:65228294-65228313 None:intergenic 50.0%
! CAAATTCAGGGTGCCTGGAA+TGG + chr7_1:65228312-65228331 Msa1030960:CDS 50.0%
TTTAGTCAGAGCCTTGGCAC+GGG + chr7_1:65228354-65228373 Msa1030960:CDS 50.0%
TTCCTTTCGCCCAGAACCTA+TGG + chr7_1:65228471-65228490 Msa1030960:CDS 50.0%
CATACTTGAGGTCGTGGAAC+CGG + chr7_1:65228658-65228677 Msa1030960:CDS 50.0%
ACTTGTGGACAGCTAGCCCT+AGG + chr7_1:65221480-65221499 Msa1030960:five_prime_UTR 55.0%
CAGCTAGCCCTAGGAAAGTG+TGG + chr7_1:65221489-65221508 Msa1030960:five_prime_UTR 55.0%
GCTCAGCTCCACACTTTCCT+AGG - chr7_1:65221500-65221519 None:intergenic 55.0%
TGCCCTTCACACTCGCTCTT+AGG + chr7_1:65221662-65221681 Msa1030960:five_prime_UTR 55.0%
ACCGGTGAAATTGTAGGCGG+TGG - chr7_1:65221743-65221762 None:intergenic 55.0%
!! CGGTGCAGTTTGCTCTGGAA+TGG + chr7_1:65222541-65222560 Msa1030960:intron 55.0%
CCAAAGGGTTGTTGCCAAGC+GGG + chr7_1:65223214-65223233 Msa1030960:CDS 55.0%
GTTGCCAAGCGGGAACAGAT+TGG + chr7_1:65223224-65223243 Msa1030960:CDS 55.0%
GATGCCAATCTGTTCCCGCT+TGG - chr7_1:65223231-65223250 None:intergenic 55.0%
! GGGGAATTGGGTCTTTGGGA+AGG - chr7_1:65225555-65225574 None:intergenic 55.0%
GTGGGAGGAAGACCCAAGAA+AGG + chr7_1:65225954-65225973 Msa1030960:CDS 55.0%
GGAGGAAGACCCAAGAAAGG+AGG + chr7_1:65225957-65225976 Msa1030960:CDS 55.0%
! TATGGAGGGACGGGTTCTCT+GGG - chr7_1:65227117-65227136 None:intergenic 55.0%
! TTATGGAGGGACGGGTTCTC+TGG - chr7_1:65227118-65227137 None:intergenic 55.0%
CAGGATGATCCCATCGGTGA+AGG + chr7_1:65227259-65227278 Msa1030960:CDS 55.0%
GAAAGGAGCTCCTTCACCGA+TGG - chr7_1:65227272-65227291 None:intergenic 55.0%
! TGTCGAGAGACGGGTTCTGT+TGG - chr7_1:65227324-65227343 None:intergenic 55.0%
GGATGATCCCATCAGTGAGG+GGG + chr7_1:65227468-65227487 Msa1030960:CDS 55.0%
CGGGATGATTCCATCGGTGA+AGG + chr7_1:65227670-65227689 Msa1030960:CDS 55.0%
CCCATGACTACACTGCCAAC+AGG + chr7_1:65227758-65227777 Msa1030960:CDS 55.0%
GCCTGTTGGCAGTGTAGTCA+TGG - chr7_1:65227762-65227781 None:intergenic 55.0%
CACTGCCAACAGGCTATCAC+TGG + chr7_1:65227768-65227787 Msa1030960:CDS 55.0%
GATCAAGGTCAGAGGCAAGC+TGG + chr7_1:65228093-65228112 Msa1030960:CDS 55.0%
! CAGCTAGTGGATCTTGCCTG+GGG - chr7_1:65228182-65228201 None:intergenic 55.0%
! GCAGCTAGTGGATCTTGCCT+GGG - chr7_1:65228183-65228202 None:intergenic 55.0%
! TGCAGCTAGTGGATCTTGCC+TGG - chr7_1:65228184-65228203 None:intergenic 55.0%
! ACCAGCAAATTCAGGGTGCC+TGG + chr7_1:65228307-65228326 Msa1030960:CDS 55.0%
TCCAGGCACCCTGAATTTGC+TGG - chr7_1:65228311-65228330 None:intergenic 55.0%
GCCTGGAATGGATCTGGCAA+TGG + chr7_1:65228324-65228343 Msa1030960:CDS 55.0%
GCCATTGCCAGATCCATTCC+AGG - chr7_1:65228328-65228347 None:intergenic 55.0%
!! AGGTTCTGGGCGAAAGGAAC+TGG - chr7_1:65228470-65228489 None:intergenic 55.0%
!! CTCCATAGGTTCTGGGCGAA+AGG - chr7_1:65228476-65228495 None:intergenic 55.0%
TTCAGTGGACGTGATGCAGC+TGG + chr7_1:65228561-65228580 Msa1030960:CDS 55.0%
GAGCTGAGCCGAGAGCAAGT+TGG + chr7_1:65221511-65221530 Msa1030960:five_prime_UTR 60.0%
! CCTTCGCGCCAACTTGCTCT+CGG - chr7_1:65221522-65221541 None:intergenic 60.0%
CCCGCTTGGCAACAACCCTT+TGG - chr7_1:65223217-65223236 None:intergenic 60.0%
ACCACCATGCTCCTCCTCCT+GGG - chr7_1:65227047-65227066 None:intergenic 60.0%
AAAGGGGCCCCCTCACTGAT+GGG - chr7_1:65227478-65227497 None:intergenic 60.0%
!! AGAGGGTGCTACCATGCGAG+GGG - chr7_1:65228235-65228254 None:intergenic 60.0%
!! GAGAGGGTGCTACCATGCGA+GGG - chr7_1:65228236-65228255 None:intergenic 60.0%
!! TGAGAGGGTGCTACCATGCG+AGG - chr7_1:65228237-65228256 None:intergenic 60.0%
! CAGGGTGCCTGGAATGGATC+TGG + chr7_1:65228318-65228337 Msa1030960:CDS 60.0%
ACGTGATGCAGCTGGTGCTC+TGG + chr7_1:65228569-65228588 Msa1030960:CDS 60.0%
! CCGAGAGCAAGTTGGCGCGA+AGG + chr7_1:65221519-65221538 Msa1030960:five_prime_UTR 65.0%
AGGCGGTGGTGAGGGGAAAG+TGG - chr7_1:65221729-65221748 None:intergenic 65.0%
CACCACCATGCTCCTCCTCC+TGG - chr7_1:65227048-65227067 None:intergenic 65.0%
CGATGACGAGCTCCACCGCT+TGG + chr7_1:65227153-65227172 Msa1030960:CDS 65.0%
GAAAGGGGCCCCCTCACTGA+TGG - chr7_1:65227479-65227498 None:intergenic 65.0%
GGCTGTTAGTGCCCCTCGCA+TGG + chr7_1:65228221-65228240 Msa1030960:CDS 65.0%
AGTCAGAGCCTTGGCACGGG+AGG + chr7_1:65228357-65228376 Msa1030960:CDS 65.0%
GGGAGTTTCCTCCCGTGCCA+AGG - chr7_1:65228368-65228387 None:intergenic 65.0%
GAGCACAGGAGTCCAGGCCC+AGG + chr7_1:65227027-65227046 Msa1030960:CDS 70.0%
CACAGGAGTCCAGGCCCAGG+AGG + chr7_1:65227030-65227049 Msa1030960:CDS 70.0%
AGGAGTCCAGGCCCAGGAGG+AGG + chr7_1:65227033-65227052 Msa1030960:CDS 70.0%
CATGCTCCTCCTCCTGGGCC+TGG - chr7_1:65227042-65227061 None:intergenic 70.0%
CAGGCCCAGGAGGAGGAGCA+TGG + chr7_1:65227040-65227059 Msa1030960:CDS 70.0%
! GCCCAGGAGGAGGAGCATGG+TGG + chr7_1:65227043-65227062 Msa1030960:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 65221305 65229048 65221305 ID=Msa1030960;Name=Msa1030960
chr7_1 mRNA 65221305 65229048 65221305 ID=Msa1030960-mRNA-1;Parent=Msa1030960;Name=Msa1030960-mRNA-1;_AED=0.06;_eAED=0.06;_QI=551|1|1|1|0.88|0.8|10|365|983
chr7_1 exon 65221305 65221760 65221305 ID=Msa1030960-mRNA-1:exon:14455;Parent=Msa1030960-mRNA-1
chr7_1 exon 65222955 65223376 65222955 ID=Msa1030960-mRNA-1:exon:14456;Parent=Msa1030960-mRNA-1
chr7_1 exon 65223479 65223615 65223479 ID=Msa1030960-mRNA-1:exon:14457;Parent=Msa1030960-mRNA-1
chr7_1 exon 65224428 65224541 65224428 ID=Msa1030960-mRNA-1:exon:14458;Parent=Msa1030960-mRNA-1
chr7_1 exon 65224630 65224713 65224630 ID=Msa1030960-mRNA-1:exon:14459;Parent=Msa1030960-mRNA-1
chr7_1 exon 65225064 65225237 65225064 ID=Msa1030960-mRNA-1:exon:14460;Parent=Msa1030960-mRNA-1
chr7_1 exon 65225884 65226040 65225884 ID=Msa1030960-mRNA-1:exon:14461;Parent=Msa1030960-mRNA-1
chr7_1 exon 65226447 65226607 65226447 ID=Msa1030960-mRNA-1:exon:14462;Parent=Msa1030960-mRNA-1
chr7_1 exon 65226713 65226839 65226713 ID=Msa1030960-mRNA-1:exon:14463;Parent=Msa1030960-mRNA-1
chr7_1 exon 65227013 65229048 65227013 ID=Msa1030960-mRNA-1:exon:14464;Parent=Msa1030960-mRNA-1
chr7_1 five_prime_UTR 65221305 65221760 65221305 ID=Msa1030960-mRNA-1:five_prime_utr;Parent=Msa1030960-mRNA-1
chr7_1 five_prime_UTR 65222955 65223049 65222955 ID=Msa1030960-mRNA-1:five_prime_utr;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65223050 65223376 65223050 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65223479 65223615 65223479 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65224428 65224541 65224428 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65224630 65224713 65224630 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65225064 65225237 65225064 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65225884 65226040 65225884 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65226447 65226607 65226447 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65226713 65226839 65226713 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 CDS 65227013 65228683 65227013 ID=Msa1030960-mRNA-1:cds;Parent=Msa1030960-mRNA-1
chr7_1 three_prime_UTR 65228684 65229048 65228684 ID=Msa1030960-mRNA-1:three_prime_utr;Parent=Msa1030960-mRNA-1
Gene Sequence

>Msa1030960

ATGCTAATGGCTGTTGATCAAAGAAGAAAGCAATTAAATGGTGCAAGCCTGGTTAGTTATGGTTCTCCAGAGCAATATAGGACTAAACGAAAGAATTTTGGACCACCAGTGCAAAGTGATCTAAACATGAAATCTCACATTTCTGTTGAATGGGATGCTAATCACCAAAGGGTTGTTGCCAAGCGGGAACAGATTGGCATCAGTTGGAGACAAACGAGACCATTTGCCAGATTTGATCACGATGGACATGAAGTCTTGGCAGATGTGCTTGCCATGCCTGAAGAAATTTTTGGCCTGGATAGTTTAAGTGAAGTGCTTTCCTATGAGGTTTGGAATACACAGCTTTCAGACAATGAGAGAAATTTTCTTAAGCAGTTTCTTCCTGGTGACTTAGAGCCAAATCAAGTTGTCCAGGAATTACTTTCTGGAGATGAATTTCACTTTGGAAACCCTTTCTTAAAATGGGGTGCTTCACTTTGTTCGGGCGATCTTCATCCAGATATGATTGTTTACCATGAGAAACATCTAAAAGCTGATAGAAGAGCATACTTCTCACAATTACGTAAATATCATAAGGATATGATTGGATTTCTAATTAAGCTGAAGGAGAGGTGGGAGACCTGCAAAAATCCAGAAAAGGAAATTCTACCAAATATTCTGAGGTCAAAGAATGATATAAAGAAAAGAAAATGGTCAAACTTGGATGAATTCAGAGATGATGATCATGATGGGAATGTTACAGTGACATCCGGGTCATATTCCTGGGATGAAGAGGAGAAAGCATACGGTGACATCCAAATTTCCTCAATGGGACAAGGCAATGAGCTTCAAAGAAGGGTGCTTGGCGAAGACTTCAATAAAGGTAAACCAAGAAATATGATGGCTTCAGCTTTTATGCTTAATAATGTGGGAGGAAGACCCAAGAAAGGAGGCAAACTACACAAGGATAACATTCATGCTAATGACGGTGACCAATATATGTCATATATCAAGATTACCAAGACGCAGCACGAACTTGTTAAGAGTTTGAAGGTATCATCTAAAAGCATCCCGGCTAGTACTCTTAACTGTGTTTTGGGTGACCTTGATAACTTTCATGTGCAACCGTTCAAATTATTTATCAAAGAAGAACAGAAGAACTTGCATGAGCATTGGTTACAATTGGTGAAGAAACATCTCCCTGCATCATATGCAAACTGGACAGAGAGACTGATACAGAAACATGCAATGAGAAATTCTTTGTTGCTTGAAATGAAAGATAAATCAAATGTACTGGTAGAGGATGATGATGTTTTGAGCACAGGAGTCCAGGCCCAGGAGGAGGAGCATGGTGGTGTTAATAACCAGTCTAGCTTGGAAGATGAAGATTCCATTGTTAGCGTCCCAGAGAACCCGTCCCTCCATAATTCTTATCACAACAGCGATGACGAGCTCCACCGCTTGGATATAGATTTGGTAAAAGATGTTTTATCAAAAGGAGATGATGCTTCACATAACAAAACTGGAGATTCAACGATTATGAAATGTCAGGATGATCCCATCGGTGAAGGAGCTCCTTTCTCATCCGATGAAGATTCTTTTGTTAGATTCCAACAGAACCCGTCTCTCGACAATTCTTATCACAGCGGCGATGACGAGCTCCACCACTTACATATAGATTTGGAGAAAAATATTTTATCAAAAGGAGGCGACTCTTCACAGTACACAATTGAACATTCAATGGTTATGAACTCTCAGGATGATCCCATCAGTGAGGGGGCCCCTTTCTCGTATAATGATACTGTTGATAGATTCCCAGAGAATTCCTCCGTTAATAAATCTTATCACAGCGATGATGAGGAGCTCCACCCCTTTCATATAGATTTGGAAAAAAATATTTTATCAAAAGGAGATGATGCTTCGCAGAACAAAACCGAGCATTCAAGGATTATGAACTCTCGGGATGATTCCATCGGTGAAGGATCATCTGAGGGTCATGCATGGCAAGCAGTTGAAATGTCGCACCCTTACTATGATTTAAGTATGACCCATGACTACACTGCCAACAGGCTATCACTGGTAAATTCACAAATTAACCAAGATAGACAAACCCGAATGATTGGTCCAGAATCTAATTTACACCAAGAAAACATTGGTAAGGAGTTGTTACACAGGAAGTCAGATGATGGTCCCTTCGGTTCTTACCAAAGCCAGGAGCAAATTGGCTTGATTCAGTCCCTCATCAAGGACAACGGGATTGGCTCCTATCATCATGAACAAAAAAGAGCTGGGTTAAATTTCCAGGCTTCAAACGATATTCCAATGGGGAATGGCCAATTTTATAGTCATTTTAAGGAGTCTTTGCAAACGTCTCTAACATTGGATCAAGGTCAGAGGCAAGCTGGTAATATTTTCATGCCAGAAAACGTATCAGGTAATATTTATTCTGACACAGGAAGTTACTTAATCCCCAGGCAAGATCCACTAGCTGCAAGAAATATTACTGATTGGGCTGTTAGTGCCCCTCGCATGGTAGCACCCTCTCAATCTCACATTAATACCGATAATTTCATTGGTCAGCCTTGGTTCTCTTCAGACCAGCAAATTCAGGGTGCCTGGAATGGATCTGGCAATGGCAGTCTATTTAGTCAGAGCCTTGGCACGGGAGGAAACTCCCATCATAACTTATTTAGTGTTCTATCTCAATATAACCAATTACGTTCAGGTAACCCTTATGAGTCAATCAGACACACTGACCAGTTCCTTTCGCCCAGAACCTATGGAGTAGTAGATGCAGGTACACATAGGATCAATGCTGTTGTACCACCATCTTCTCATCCACTAGATTATTTCAGTGGACGTGATGCAGCTGGTGCTCTGGTGCCTGATGATATGACATGGATGAGCTTGCCTCCTCAAAATCCTACTTTAAATGATCAAATAGGATCATACTTGAGGTCGTGGAACCGGTAA
Protein sequence

>Msa1030960

MLMAVDQRRKQLNGASLVSYGSPEQYRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKREQIGISWRQTRPFARFDHDGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDNERNFLKQFLPGDLEPNQVVQELLSGDEFHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKADRRAYFSQLRKYHKDMIGFLIKLKERWETCKNPEKEILPNILRSKNDIKKRKWSNLDEFRDDDHDGNVTVTSGSYSWDEEEKAYGDIQISSMGQGNELQRRVLGEDFNKGKPRNMMASAFMLNNVGGRPKKGGKLHKDNIHANDGDQYMSYIKITKTQHELVKSLKVSSKSIPASTLNCVLGDLDNFHVQPFKLFIKEEQKNLHEHWLQLVKKHLPASYANWTERLIQKHAMRNSLLLEMKDKSNVLVEDDDVLSTGVQAQEEEHGGVNNQSSLEDEDSIVSVPENPSLHNSYHNSDDELHRLDIDLVKDVLSKGDDASHNKTGDSTIMKCQDDPIGEGAPFSSDEDSFVRFQQNPSLDNSYHSGDDELHHLHIDLEKNILSKGGDSSQYTIEHSMVMNSQDDPISEGAPFSYNDTVDRFPENSSVNKSYHSDDEELHPFHIDLEKNILSKGDDASQNKTEHSRIMNSRDDSIGEGSSEGHAWQAVEMSHPYYDLSMTHDYTANRLSLVNSQINQDRQTRMIGPESNLHQENIGKELLHRKSDDGPFGSYQSQEQIGLIQSLIKDNGIGSYHHEQKRAGLNFQASNDIPMGNGQFYSHFKESLQTSLTLDQGQRQAGNIFMPENVSGNIYSDTGSYLIPRQDPLAARNITDWAVSAPRMVAPSQSHINTDNFIGQPWFSSDQQIQGAWNGSGNGSLFSQSLGTGGNSHHNLFSVLSQYNQLRSGNPYESIRHTDQFLSPRTYGVVDAGTHRINAVVPPSSHPLDYFSGRDAAGALVPDDMTWMSLPPQNPTLNDQIGSYLRSWNR*