AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0039140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039140 MtrunA17_Chr1g0203131 93.864 1369 29 3 1 1315 1 1368 0.0 2622
Msa0039140 MtrunA17_Chr6g0472241 76.080 1296 249 4 75 1315 35 1324 0.0 2034
Msa0039140 MtrunA17_Chr1g0203111 82.353 119 20 1 1 119 1 118 2.32e-57 193
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039140 AT4G20850.1 68.259 1298 340 6 73 1315 100 1380 0.0 1836

Find 339 sgRNAs with CRISPR-Local

Find 974 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCTGATGGTTGTATTTC+TGG 0.122246 1_1:+68670401 Msa0039140:CDS
GAGAATAAGTCAACCTTATT+TGG 0.153575 1_1:-68680345 None:intergenic
GCATGAAGACTTGCAGATTT+TGG 0.179437 1_1:+68679378 Msa0039140:CDS
CAATTAATCTCTTGTAAAAT+TGG 0.200017 1_1:+68673981 Msa0039140:CDS
TTGGCGTCTTCATGAAATTT+AGG 0.202555 1_1:-68676069 None:intergenic
AGCAGAAATCGAGTCTTTAA+AGG 0.205286 1_1:+68683097 Msa0039140:CDS
CGCCAACAAGCTTGAAGATT+TGG 0.221564 1_1:+68676086 Msa0039140:CDS
CTGACCACCTACTACCTTAA+AGG 0.227567 1_1:-68678103 None:intergenic
TAAGAAGATCAAGTTTATTC+TGG 0.232847 1_1:-68671799 None:intergenic
GCTCAATCAGTCTACTTTCT+TGG 0.243230 1_1:+68668951 Msa0039140:CDS
CTTATGCCTAAAACGGAAAT+TGG 0.243755 1_1:+68668979 Msa0039140:CDS
CTATATATTTCCTTTCTATA+TGG 0.245209 1_1:-68677848 None:intergenic
GACGTTAAGTGCACAAAATA+TGG 0.248807 1_1:+68683605 Msa0039140:CDS
CATCTTCTGATGAAGAAGTT+TGG 0.249511 1_1:-68668787 None:intergenic
AATTAATGTTGAGGACTTAA+AGG 0.254585 1_1:-68679967 None:intergenic
GGTGTTATTGTTCCCGTCTT+TGG 0.257930 1_1:-68668899 None:intergenic
TTTGTTTGATGAAAACTTTA+AGG 0.264275 1_1:+68683565 Msa0039140:CDS
TCATATAGTTTCTTCTTTGC+AGG 0.265938 1_1:-68683898 None:intergenic
TTGTACCCTTGACTAATTAT+AGG 0.267212 1_1:+68672689 Msa0039140:CDS
TATGATGCAGGGTGCTTCTC+TGG 0.274528 1_1:-68680300 None:intergenic
TATGATTTCCGATTCAAATA+AGG 0.274716 1_1:+68678872 Msa0039140:CDS
TTATATAGTTCCTCCAAATA+AGG 0.279280 1_1:+68680332 Msa0039140:CDS
AATTGGTTTAGGTGCTTCTT+TGG 0.286766 1_1:+68671081 Msa0039140:intron
TCCGTTGCTTGCAAAGATTT+TGG 0.294180 1_1:+68681669 Msa0039140:CDS
CATAAGCTTTAAGATATCTT+AGG 0.299823 1_1:+68684043 Msa0039140:three_prime_UTR
ACGTTCAGAAACAGTCTTCT+TGG 0.302120 1_1:-68680574 None:intergenic
TGTAAACTGTATTCTCCTTT+GGG 0.304910 1_1:-68679070 None:intergenic
CTGCTAGTGCAAGCCCCTTC+TGG 0.307612 1_1:-68683079 None:intergenic
ATGCAGACCATCACATAAAT+TGG 0.311276 1_1:-68677305 None:intergenic
TTGTAAACTGTATTCTCCTT+TGG 0.312119 1_1:-68679071 None:intergenic
TTTCAGATACAAGGTCAAAT+TGG 0.315141 1_1:+68678770 Msa0039140:intron
CTTTGGCTATCAACACTTCA+TGG 0.318444 1_1:+68671098 Msa0039140:CDS
AAATTCCAGATTGTGTTTCA+TGG 0.325625 1_1:+68678361 Msa0039140:intron
ATCTTCTGATGAAGAAGTTT+GGG 0.333853 1_1:-68668786 None:intergenic
ACCTTGGGAAGCTTGTCTTT+TGG 0.334662 1_1:-68680117 None:intergenic
CCTCATGGCACCCATGTTGC+TGG 0.340412 1_1:+68673824 Msa0039140:CDS
ATGAGTGAGCAGTAGATATT+CGG 0.340979 1_1:-68676166 None:intergenic
ACCTGTAGCAAATCTAAATA+AGG 0.344637 1_1:+68678477 Msa0039140:CDS
TTAGAATCTACAGGTCGATA+TGG 0.346444 1_1:-68678603 None:intergenic
AAGAAGAAGCGGGATGGAAT+TGG 0.346591 1_1:-68668582 None:intergenic
TTCTACTCTCAGCATATTAG+TGG 0.352367 1_1:+68677276 Msa0039140:intron
GCAAAGATTAAGCATTGGTT+TGG 0.358645 1_1:-68668833 None:intergenic
TTGGCATGTGGGTTATAAAT+TGG 0.359233 1_1:+68671138 Msa0039140:CDS
AGCTAGTCATAGCTCAGTTT+TGG 0.361011 1_1:+68678133 Msa0039140:CDS
AGGGCCTTCCTCACGCTATA+TGG 0.367150 1_1:-68674970 None:intergenic
CCAACATTGTTGCCAGACTA+TGG 0.367334 1_1:+68674254 Msa0039140:CDS
TGAGAGAAATTTAGAAGATA+AGG 0.369665 1_1:+68679429 Msa0039140:CDS
CCTTCTGTTGTAGCTGCAGC+CGG 0.371225 1_1:-68683497 None:intergenic
ATTGATTTATTTACCAATCA+AGG 0.374381 1_1:-68670257 None:intergenic
GGAGGATGCTAAACTCAAAA+AGG 0.375076 1_1:+68671763 Msa0039140:CDS
CGGTTAGGTTCAATGGAAAC+TGG 0.377512 1_1:+68674011 Msa0039140:CDS
AAGGAACCATTTCCCATCAA+TGG 0.378497 1_1:-68679948 None:intergenic
ATACCAAACAACAGCATCTA+TGG 0.378775 1_1:-68672590 None:intergenic
CCTCAAATACCATTTCTAAA+TGG 0.379337 1_1:+68678813 Msa0039140:CDS
AAGTCCTCAACATTAATTCC+AGG 0.380000 1_1:+68679972 Msa0039140:CDS
AATGTCCAAGGGATGGTAAA+TGG 0.381665 1_1:-68684121 None:intergenic
TGCTACAGGTGTAAGTTTCT+CGG 0.382430 1_1:-68678464 None:intergenic
GGTAAAGTGCCTCTGCTAAC+TGG 0.383134 1_1:-68683058 None:intergenic
AACCAAATCTTCAAGCTTGT+TGG 0.387907 1_1:-68676088 None:intergenic
GGCGTAGACCCAGCTGCTGC+TGG 0.389466 1_1:+68670192 Msa0039140:CDS
TTTCCCATCAATGGGCCATC+TGG 0.389572 1_1:-68679939 None:intergenic
CAAGAGGTAATTGTACTTGA+TGG 0.390915 1_1:+68678397 Msa0039140:CDS
ATCTTATAAACATGAGTTAT+GGG 0.392195 1_1:+68674228 Msa0039140:CDS
CTCGAAATATTCCATGTGTT+TGG 0.392955 1_1:+68675189 Msa0039140:CDS
CAAATAAACATCAATCAATC+TGG 0.401537 1_1:+68675215 Msa0039140:CDS
ACTTTAAGGAACTGAAGAAA+TGG 0.402563 1_1:+68683579 Msa0039140:CDS
TCAACAAAGCGTCCATAGTC+TGG 0.403644 1_1:-68674266 None:intergenic
AACATTGACCTCTCGTTTGA+AGG 0.404019 1_1:+68671180 Msa0039140:CDS
GATGCTGTTGTTTGGTATGA+TGG 0.404229 1_1:+68672595 Msa0039140:CDS
TGTCAGGAGCCTTTGTTGAA+TGG 0.405747 1_1:+68673942 Msa0039140:intron
TCCAGGACTGAGAGGAAGTA+TGG 0.406744 1_1:+68673716 Msa0039140:intron
AAATTCTTGATATCCTTGAT+TGG 0.410187 1_1:+68670244 Msa0039140:CDS
TTTCATTAGGCCATATAGAA+AGG 0.410284 1_1:+68677838 Msa0039140:intron
ATCAAAACTTGATAAGTTCA+TGG 0.410948 1_1:-68677904 None:intergenic
GGTTGTATTTCTGGTGCATC+AGG 0.411053 1_1:+68670410 Msa0039140:CDS
TCGCAATACCTTATTTGAAT+CGG 0.415181 1_1:-68678880 None:intergenic
CGCTTATGTTTCTCCTGCTA+TGG 0.415841 1_1:+68674511 Msa0039140:CDS
GGCTTCTCTTATGCCTAAAA+CGG 0.417600 1_1:+68668972 Msa0039140:CDS
AAAGCTTATGCTGATGCAAC+TGG 0.419701 1_1:-68684030 None:intergenic
CTGCCATAGATGCTGTTGTT+TGG 0.420184 1_1:+68672587 Msa0039140:CDS
AGACTCTCGGTTAGGTTCAA+TGG 0.420662 1_1:+68674004 Msa0039140:CDS
TTTAGAGCTATGATGATAAA+GGG 0.420811 1_1:+68672563 Msa0039140:intron
TATGGAAAACTATCATTTGC+CGG 0.430490 1_1:+68680258 Msa0039140:CDS
TCCTCTGGTGAATCACCAAT+TGG 0.432733 1_1:-68675009 None:intergenic
GATCTTATAAACATGAGTTA+TGG 0.432829 1_1:+68674227 Msa0039140:CDS
TAATAATCACAAAATTAACT+TGG 0.433418 1_1:+68684145 Msa0039140:three_prime_UTR
GTTTCTCCTGCTATGGCGGC+TGG 0.434315 1_1:+68674518 Msa0039140:CDS
ATCTCACCTCAGTAGATTGT+TGG 0.438231 1_1:-68675475 None:intergenic
CCATTTAGAAATGGTATTTG+AGG 0.440117 1_1:-68678813 None:intergenic
TGAAGAGTCCATGTTGGAAC+AGG 0.440470 1_1:-68674748 None:intergenic
ACTTGTAATCCAGCAGCAGC+TGG 0.440905 1_1:-68670201 None:intergenic
TTTGGTATGATGGAGAGGTT+TGG 0.443054 1_1:+68672605 Msa0039140:CDS
CTAAGCACTGTTGGTGCACC+TGG 0.443432 1_1:+68674458 Msa0039140:CDS
CCCTAGAAAAGGGGTAAGCT+AGG 0.444195 1_1:-68683964 None:intergenic
AAACCCATACAAAACATGAT+TGG 0.445766 1_1:-68684073 None:intergenic
CTTATTGATAGCATAAAAGA+AGG 0.446003 1_1:+68680075 Msa0039140:intron
CATTGCAAAGACCTTTGAAA+TGG 0.447462 1_1:+68678037 Msa0039140:CDS
AGTGCCTCATGGTGCATCTT+GGG 0.447598 1_1:+68677872 Msa0039140:CDS
AAAACTATCATTTGCCGGAC+AGG 0.448302 1_1:+68680263 Msa0039140:CDS
GACTACGAATGTGGATCTTA+AGG 0.448785 1_1:+68678179 Msa0039140:CDS
TCATCCTTTGATTGCTCGAC+GGG 0.450103 1_1:-68683527 None:intergenic
CGGTGAAGATTGATCAGAAA+TGG 0.450833 1_1:-68668754 None:intergenic
GGTATGATGGAGAGGTTTGG+AGG 0.451394 1_1:+68672608 Msa0039140:CDS
TAAGCCAGATGGCCCATTGA+TGG 0.454888 1_1:+68679935 Msa0039140:CDS
GTAAGCAGTGCTGGTAATAG+TGG 0.455777 1_1:+68674428 Msa0039140:CDS
GTGCCTCTGCTAACTGGTCC+CGG 0.456843 1_1:-68683052 None:intergenic
GATGGCCCATTGATGGGAAA+TGG 0.457766 1_1:+68679942 Msa0039140:CDS
GCTTCTCGTGTGTCACCAAC+AGG 0.458893 1_1:-68683631 None:intergenic
GGTTCAATGGAAACTGGAAC+TGG 0.460993 1_1:+68674017 Msa0039140:CDS
AGGAACCATTTCCCATCAAT+GGG 0.462121 1_1:-68679947 None:intergenic
AGGTAGATGCCCCGTGATGA+TGG 0.462503 1_1:-68675434 None:intergenic
TGAGTGAGCAGTAGATATTC+GGG 0.462701 1_1:-68676165 None:intergenic
GCAAGCAACGGAGTGTACTT+TGG 0.463823 1_1:-68681658 None:intergenic
CAGATGGAAAACCCTAGAAA+AGG 0.464019 1_1:-68683975 None:intergenic
AGTTGATGCAGAAGCACTAC+TGG 0.464268 1_1:+68678438 Msa0039140:CDS
CAGTCTTAGCAATTTCCTCC+TGG 0.464893 1_1:-68671334 None:intergenic
GGTGTCTGCGTAAGTGCTCC+TGG 0.464938 1_1:+68674712 Msa0039140:CDS
AGATGGAAAACCCTAGAAAA+GGG 0.464968 1_1:-68683974 None:intergenic
GAGAACACTTCTGTTCCAAT+TGG 0.466245 1_1:+68674994 Msa0039140:CDS
CTTGAGGATGATTCAGATTG+TGG 0.466551 1_1:+68672652 Msa0039140:CDS
TTTGGAAAAGATGAAGCATC+TGG 0.467739 1_1:+68679396 Msa0039140:CDS
TATATCCGACCATTTAGAAA+TGG 0.468165 1_1:-68678822 None:intergenic
TTTCAATTATATATGCATCA+AGG 0.469563 1_1:+68684093 Msa0039140:three_prime_UTR
AAAATTGGAGACTCTCGGTT+AGG 0.469865 1_1:+68673996 Msa0039140:CDS
GGATTACAAGTTACCTCTGA+TGG 0.470923 1_1:+68670213 Msa0039140:CDS
CTGATATTTGTAAGCAGTGC+TGG 0.471270 1_1:+68674419 Msa0039140:CDS
ATTAAGCATTGGTTTGGAAA+CGG 0.471500 1_1:-68668827 None:intergenic
TGAGCACCAGCCGCCATAGC+AGG 0.472222 1_1:-68674524 None:intergenic
CTTCTGTTGTAGCTGCAGCC+GGG 0.473046 1_1:-68683496 None:intergenic
CTCACGCTATATGGACTAAC+GGG 0.474410 1_1:-68674961 None:intergenic
AAGGATTGGGACAGCATTGA+AGG 0.474927 1_1:+68683661 Msa0039140:CDS
GATTGCCATTTACCATCCCT+TGG 0.474976 1_1:+68684116 Msa0039140:three_prime_UTR
TCTTCATCAGAAGATGCAAT+TGG 0.477247 1_1:+68668794 Msa0039140:CDS
GGTACGTCTTCAAGTATCAT+AGG 0.479088 1_1:+68674482 Msa0039140:CDS
TGCTGTTGAACCTCCATCTG+AGG 0.479438 1_1:+68674550 Msa0039140:CDS
TTCAATTATATATGCATCAA+GGG 0.479928 1_1:+68684094 Msa0039140:three_prime_UTR
CCAGCGGATAATTTATCCTC+TGG 0.480215 1_1:-68675024 None:intergenic
TTGGAACAGAAGTGTTCTCC+AGG 0.480977 1_1:-68674990 None:intergenic
AAGTGCCTCATGGTGCATCT+TGG 0.481863 1_1:+68677871 Msa0039140:CDS
CTTTAAGGAACTGAAGAAAT+GGG 0.482645 1_1:+68683580 Msa0039140:CDS
TAAGAAATTCGATATGATGC+AGG 0.483138 1_1:-68680312 None:intergenic
TCCAAAATCTTTGCAAGCAA+CGG 0.483439 1_1:-68681670 None:intergenic
ACAAGAGATTAATTGTGCTC+CGG 0.484108 1_1:-68673973 None:intergenic
CAAGAGATTAATTGTGCTCC+GGG 0.488500 1_1:-68673972 None:intergenic
TATGTACCTCTTCATGATGA+TGG 0.488871 1_1:-68681729 None:intergenic
ACAGTTTACAACTATATGTA+AGG 0.491738 1_1:+68679083 Msa0039140:CDS
TGTCATCTCCATCAGCCTGC+GGG 0.492456 1_1:+68674800 Msa0039140:CDS
GATAATTAATGCAGCAAATG+AGG 0.495987 1_1:+68682346 Msa0039140:intron
ATTGCTCATAAGCGCTATGA+AGG 0.497611 1_1:+68674831 Msa0039140:CDS
AACTTCACCTTTAAGGTAGT+AGG 0.499282 1_1:+68678096 Msa0039140:CDS
TAGAATCTACAGGTCGATAT+GGG 0.501545 1_1:-68678602 None:intergenic
ACCTTATTTAGATTTGCTAC+AGG 0.502093 1_1:-68678478 None:intergenic
TTCTGAACGTTTAGAAGAAG+AGG 0.503638 1_1:+68680587 Msa0039140:CDS
CTCTCTGCAAGGATCTGTAT+TGG 0.504930 1_1:+68680221 Msa0039140:CDS
GATAAATTATCCGCTGGGCA+AGG 0.505361 1_1:+68675030 Msa0039140:CDS
GGCAAGCATTAGCCTCTCTC+AGG 0.506318 1_1:-68675454 None:intergenic
ATGATGCAGGGTGCTTCTCT+GGG 0.506852 1_1:-68680299 None:intergenic
CATCATAGTGTGGATACAAA+TGG 0.508013 1_1:-68669017 None:intergenic
GTGATGAAGATCTCTTAGAA+TGG 0.512658 1_1:+68681407 Msa0039140:CDS
GATCGTGACAAACTCCCCTC+TGG 0.512764 1_1:+68678645 Msa0039140:CDS
AATAAGTCAACCTTATTTGG+AGG 0.512986 1_1:-68680342 None:intergenic
TTCACTTCTTCTCAACCCGC+TGG 0.514639 1_1:+68668865 Msa0039140:CDS
AACGGCGTATGCTCATGAAC+GGG 0.515153 1_1:+68674770 Msa0039140:CDS
TGTGATTATTACAATGTCCA+AGG 0.515799 1_1:-68684133 None:intergenic
AAACTATCATTTGCCGGACA+GGG 0.515868 1_1:+68680264 Msa0039140:CDS
CATTTGTATCCACACTATGA+TGG 0.517018 1_1:+68669018 Msa0039140:CDS
ATATAGCGTGAGGAAGGCCC+TGG 0.517625 1_1:+68674972 Msa0039140:CDS
TATCTACTGCTCACTCATAA+CGG 0.517636 1_1:+68676171 Msa0039140:CDS
GAAGAGCAAAGATTAAGCAT+TGG 0.519646 1_1:-68668838 None:intergenic
CCAACGACTGATGGGGATCT+CGG 0.520677 1_1:+68674691 Msa0039140:CDS
AGAAGCGTAGTCAAAGGATT+GGG 0.521199 1_1:+68683648 Msa0039140:CDS
ACGTTAAGTGCACAAAATAT+GGG 0.522085 1_1:+68683606 Msa0039140:CDS
CCAGAGGATAAATTATCCGC+TGG 0.522205 1_1:+68675024 Msa0039140:CDS
TTAATCTTCAGCACTGGGAG+TGG 0.523163 1_1:+68670347 Msa0039140:intron
CCTAGAAAAGGGGTAAGCTA+GGG 0.525118 1_1:-68683963 None:intergenic
TTGGTCGGATCAATATCATA+TGG 0.525869 1_1:+68680240 Msa0039140:CDS
GTCGAGGACCAACGACTGAT+GGG 0.526217 1_1:+68674683 Msa0039140:CDS
GCGGAGAGAAGCAGTGGCAT+TGG 0.526870 1_1:-68668920 None:intergenic
TTGAGGATGATTCAGATTGT+GGG 0.527279 1_1:+68672653 Msa0039140:CDS
ATAAATTATCCGCTGGGCAA+GGG 0.527532 1_1:+68675031 Msa0039140:CDS
CAGTATTGATAGAGAAGAGC+TGG 0.528051 1_1:+68682376 Msa0039140:CDS
AACTGGAACTGGTTTGACTC+GGG 0.530121 1_1:+68674028 Msa0039140:CDS
GATTGATCAGAAATGGAGAA+GGG 0.530482 1_1:-68668747 None:intergenic
GAGAAGCGTAGTCAAAGGAT+TGG 0.531125 1_1:+68683647 Msa0039140:CDS
CTTGTAAAATTGGAGACTCT+CGG 0.531425 1_1:+68673991 Msa0039140:CDS
CATTTCAAAGGTCTTTGCAA+TGG 0.531844 1_1:-68678036 None:intergenic
GCACCAACAGTGCTTAGCGC+TGG 0.532106 1_1:-68674452 None:intergenic
AGGTTATGATTTCAGATACA+AGG 0.532117 1_1:+68678761 Msa0039140:intron
AAGCCAGATGGCCCATTGAT+GGG 0.533768 1_1:+68679936 Msa0039140:CDS
GGGCCAGCGCTAAGCACTGT+TGG 0.534244 1_1:+68674449 Msa0039140:CDS
TTGTTGAATGGAGTTGCACC+CGG 0.535336 1_1:+68673954 Msa0039140:CDS
GCTGTTGAACCTCCATCTGA+GGG 0.537277 1_1:+68674551 Msa0039140:CDS
CTATTGCTCCTGTTCCAACA+TGG 0.538570 1_1:+68674740 Msa0039140:CDS
AAGAGGTAATTGTACTTGAT+GGG 0.538804 1_1:+68678398 Msa0039140:CDS
AGTCGAGGACCAACGACTGA+TGG 0.540077 1_1:+68674682 Msa0039140:CDS
ACTGATTGAGCTTGAAGTTG+CGG 0.540614 1_1:-68668939 None:intergenic
TACAAGGTCAAATTGGATGA+TGG 0.543337 1_1:+68678777 Msa0039140:CDS
TTGGCGTTGTCATCACCAGC+GGG 0.543503 1_1:-68668880 None:intergenic
CAGAGGCACTTTACCAGAAG+GGG 0.544874 1_1:+68683066 Msa0039140:CDS
GATGACAGATCCATCATCAC+GGG 0.547411 1_1:+68675424 Msa0039140:intron
AAATACCATTTCTAAATGGT+CGG 0.547424 1_1:+68678817 Msa0039140:CDS
GAAGCGGGATGGAATTGGAT+AGG 0.547580 1_1:-68668577 None:intergenic
CCATAGTCTGGCAACAATGT+TGG 0.547884 1_1:-68674254 None:intergenic
ATAACACTCCGCCATTTCAA+AGG 0.548584 1_1:-68678048 None:intergenic
TTCTGTTGTAGCTGCAGCCG+GGG 0.548833 1_1:-68683495 None:intergenic
GCTTCTGCATCAACTCTGAC+AGG 0.550118 1_1:-68678430 None:intergenic
CCGGCTGCAGCTACAACAGA+AGG 0.550127 1_1:+68683497 Msa0039140:CDS
CCATACAAAACATGATTGGA+TGG 0.551186 1_1:-68684069 None:intergenic
AGATTGATCAGAAATGGAGA+AGG 0.552029 1_1:-68668748 None:intergenic
GTGATGACAACGCCAAAGAC+GGG 0.552289 1_1:+68668887 Msa0039140:CDS
GTGATTATTACAATGTCCAA+GGG 0.554107 1_1:-68684132 None:intergenic
AGCAGAGGCACTTTACCAGA+AGG 0.554993 1_1:+68683064 Msa0039140:CDS
TGCCTCTGCTAACTGGTCCC+GGG 0.558075 1_1:-68683051 None:intergenic
GATCCTACCAATTTATGTGA+TGG 0.558273 1_1:+68677298 Msa0039140:CDS
CCCTTCTGGTGATTGGCATG+TGG 0.559866 1_1:+68671126 Msa0039140:CDS
AGTCCTCAACATTAATTCCA+GGG 0.561028 1_1:+68679973 Msa0039140:CDS
CTGCATTATTACGAAGTCTA+CGG 0.561030 1_1:+68677322 Msa0039140:CDS
CCTTCTGGTGATTGGCATGT+GGG 0.561088 1_1:+68671127 Msa0039140:CDS
GCGCTGATCTTAGAATCTAC+AGG 0.561479 1_1:-68678612 None:intergenic
ACAGCAACCTGTTTCACAGA+TGG 0.562569 1_1:-68683991 None:intergenic
CAGTAGCAATACCAGCAACA+TGG 0.564866 1_1:-68673835 None:intergenic
TGCAAAGACCTTTGAAATGG+CGG 0.566121 1_1:+68678040 Msa0039140:CDS
GTCATCCTTTGATTGCTCGA+CGG 0.568081 1_1:-68683528 None:intergenic
CAGAGGATAAATTATCCGCT+GGG 0.571192 1_1:+68675025 Msa0039140:CDS
GTAGTGAATGTCTATAACGA+TGG 0.571240 1_1:+68673770 Msa0039140:CDS
GGTAGTAGGTGGTCAGACAT+TGG 0.572814 1_1:+68678110 Msa0039140:CDS
CTGCAAGGATCTGTATTGGT+CGG 0.572910 1_1:+68680225 Msa0039140:CDS
GTATGATGGAGAGGTTTGGA+GGG 0.574815 1_1:+68672609 Msa0039140:CDS
GGTGATGACAACGCCAAAGA+CGG 0.574875 1_1:+68668886 Msa0039140:CDS
TTCCAACATGGACTCTTCAA+CGG 0.575776 1_1:+68674752 Msa0039140:CDS
GTGTATTCAAGCCCCTCAGA+TGG 0.575914 1_1:-68674563 None:intergenic
AAACTGGAACTGGTTTGACT+CGG 0.577225 1_1:+68674027 Msa0039140:CDS
ATCTGTGAAACAGGTTGCTG+TGG 0.579615 1_1:+68683993 Msa0039140:three_prime_UTR
AACTATCATTTGCCGGACAG+GGG 0.579701 1_1:+68680265 Msa0039140:CDS
GATTACAAGTTACCTCTGAT+GGG 0.579711 1_1:+68670214 Msa0039140:CDS
ATGTACCTCTTCATGATGAT+GGG 0.582087 1_1:-68681728 None:intergenic
CCTCACGCTATATGGACTAA+CGG 0.582687 1_1:-68674962 None:intergenic
CTTGTAATCCAGCAGCAGCT+GGG 0.583200 1_1:-68670200 None:intergenic
TGTTGTTTGGTATGATGGAG+AGG 0.583597 1_1:+68672600 Msa0039140:CDS
GCTAGCATCTGCTTTCCAGA+GGG 0.584019 1_1:-68678660 None:intergenic
GGCACTGATAGCTGCTGTGG+AGG 0.585166 1_1:+68674049 Msa0039140:CDS
AGCGGGTTGAGAAGAAGTGA+AGG 0.586360 1_1:-68668863 None:intergenic
TTGAAGATTGACGAGGACAA+AGG 0.586919 1_1:+68680534 Msa0039140:intron
GCAGAGGCACTTTACCAGAA+GGG 0.587605 1_1:+68683065 Msa0039140:CDS
TCTGGATGATGAGGAAGCAC+AGG 0.591158 1_1:+68682424 Msa0039140:CDS
CTGAGGGGCTTGAATACACA+TGG 0.591741 1_1:+68674567 Msa0039140:CDS
CTAGCAACATCAGAAGGTGG+AGG 0.593914 1_1:+68671745 Msa0039140:intron
TCACTACCTATAATTAGTCA+AGG 0.594586 1_1:-68672695 None:intergenic
CAAATCCCATCATCATGAAG+AGG 0.596201 1_1:+68681723 Msa0039140:CDS
ATACTTGAAGACGTACCACC+AGG 0.597573 1_1:-68674476 None:intergenic
CGCCGTTGAAGAGTCCATGT+TGG 0.598877 1_1:-68674754 None:intergenic
TTTATTTGATACCAAACACA+TGG 0.599485 1_1:-68675200 None:intergenic
CAAGTTGTCTGTCTTGCTCA+AGG 0.599606 1_1:+68681432 Msa0039140:CDS
AGAAGTTTGGGTTTGTTGTG+CGG 0.602422 1_1:-68668774 None:intergenic
GTCATCTCCATCAGCCTGCG+GGG 0.603311 1_1:+68674801 Msa0039140:CDS
TGAAACAGGTTGCTGTGGAA+TGG 0.603611 1_1:+68683998 Msa0039140:three_prime_UTR
TCGGGCACTGATAGCTGCTG+TGG 0.604108 1_1:+68674046 Msa0039140:CDS
CTAGAAAAGGGGTAAGCTAG+GGG 0.604457 1_1:-68683962 None:intergenic
GCGGGATGGAATTGGATAGG+TGG 0.604813 1_1:-68668574 None:intergenic
TAAAGCTCTATAAGAGACAG+TGG 0.606216 1_1:+68683923 Msa0039140:CDS
AAATCCCGTCGAGCAATCAA+AGG 0.608560 1_1:+68683523 Msa0039140:CDS
TTATGCTGATGCAACTGGCA+AGG 0.610247 1_1:-68684025 None:intergenic
ATAATCTGCACGCAGGAAGA+GGG 0.610499 1_1:+68674934 Msa0039140:intron
CACTACCTATAATTAGTCAA+GGG 0.610683 1_1:-68672694 None:intergenic
CAACGGCGTATGCTCATGAA+CGG 0.610978 1_1:+68674769 Msa0039140:CDS
TTATGTTTCTCCTGCTATGG+CGG 0.611038 1_1:+68674514 Msa0039140:CDS
AGATATTGATACATCAAAAG+TGG 0.611281 1_1:+68670370 Msa0039140:CDS
AGGATGATTCAGATTGTGGG+AGG 0.611998 1_1:+68672656 Msa0039140:CDS
GTGACAGACAGCTCTCCTCA+TGG 0.615382 1_1:+68673809 Msa0039140:CDS
TCTCGACACACAGAGTCTTG+AGG 0.616066 1_1:+68672636 Msa0039140:CDS
TCTTCAAGTATCATAGGTGT+CGG 0.616190 1_1:+68674488 Msa0039140:CDS
TAAGCAGTGCTGGTAATAGT+GGG 0.619433 1_1:+68674429 Msa0039140:CDS
GTAAACTGTATTCTCCTTTG+GGG 0.619626 1_1:-68679069 None:intergenic
CAAACAACAGCATCTATGGC+AGG 0.620413 1_1:-68672586 None:intergenic
ACTATCATTTGCCGGACAGG+GGG 0.620586 1_1:+68680266 Msa0039140:CDS
CCTAATTCTCCAGGACTGAG+AGG 0.620754 1_1:+68673708 Msa0039140:intron
AGACCATCACATAAATTGGT+AGG 0.620850 1_1:-68677301 None:intergenic
TGCTAGCATCTGCTTTCCAG+AGG 0.621309 1_1:-68678661 None:intergenic
AAGAAATTCGATATGATGCA+GGG 0.621386 1_1:-68680311 None:intergenic
CCCACATGCCAATCACCAGA+AGG 0.621871 1_1:-68671127 None:intergenic
TAGTCCATATAGCGTGAGGA+AGG 0.623207 1_1:+68674966 Msa0039140:CDS
TTCACCTTTAAGGTAGTAGG+TGG 0.624388 1_1:+68678099 Msa0039140:CDS
ATAGGTGGATTTAACTCGAG+TGG 0.625155 1_1:-68668559 None:intergenic
GAAAAGTGATCTGGATGATG+AGG 0.626476 1_1:+68682415 Msa0039140:CDS
GAGTCATGAGACTACGAATG+TGG 0.630387 1_1:+68678170 Msa0039140:CDS
TGATGACAGATCCATCATCA+CGG 0.631713 1_1:+68675423 Msa0039140:intron
TATTCAAGCCCCTCAGATGG+AGG 0.632535 1_1:-68674560 None:intergenic
CACACGAGAAGCGTAGTCAA+AGG 0.632931 1_1:+68683642 Msa0039140:CDS
AGTAGCAATACCAGCAACAT+GGG 0.633798 1_1:-68673834 None:intergenic
CCGAGATCCCCATCAGTCGT+TGG 0.635698 1_1:-68674691 None:intergenic
TCATCTCCATCAGCCTGCGG+GGG 0.636136 1_1:+68674802 Msa0039140:CDS
GATGGAAAACCCTAGAAAAG+GGG 0.638207 1_1:-68683973 None:intergenic
AAATATATAGAAGTGCCTCA+TGG 0.639001 1_1:+68677861 Msa0039140:CDS
ATGTCATCTCCATCAGCCTG+CGG 0.639420 1_1:+68674799 Msa0039140:CDS
TTATTACAATGTCCAAGGGA+TGG 0.641354 1_1:-68684128 None:intergenic
AGCACTGTTGGTGCACCTGG+TGG 0.642122 1_1:+68674461 Msa0039140:CDS
TGGTATAAAAGCTAGTCAAG+AGG 0.642711 1_1:+68678381 Msa0039140:CDS
TCCAATTGGTGATTCACCAG+AGG 0.643015 1_1:+68675008 Msa0039140:CDS
TTTCTAGCAACATCAGAAGG+TGG 0.643320 1_1:+68671742 Msa0039140:intron
GTCGAGCAATCAAAGGATGA+CGG 0.643549 1_1:+68683530 Msa0039140:CDS
TCGAGGACCAACGACTGATG+GGG 0.643644 1_1:+68674684 Msa0039140:CDS
TTTCCACAGAACTCTCTGCA+AGG 0.644061 1_1:+68680210 Msa0039140:intron
TTATAGCGAGTATATTCAAG+TGG 0.646443 1_1:+68679019 Msa0039140:intron
GAAGTTGCGGAGAGAAGCAG+TGG 0.647896 1_1:-68668926 None:intergenic
CATAGTGTGGATACAAATGG+AGG 0.647915 1_1:-68669014 None:intergenic
ACCAAAAGACAAGCTTCCCA+AGG 0.652371 1_1:+68680116 Msa0039140:CDS
GGTGCAACTCCATTCAACAA+AGG 0.654685 1_1:-68673951 None:intergenic
AAAGGAGGTAGATAACTCCC+CGG 0.654856 1_1:+68683478 Msa0039140:intron
ATCGTTGTCAGGTCTAGTCG+AGG 0.655431 1_1:+68674667 Msa0039140:intron
ACGGGGCATCTACCTGAGAG+AGG 0.660180 1_1:+68675442 Msa0039140:CDS
TTTGGCGTTGTCATCACCAG+CGG 0.660198 1_1:-68668881 None:intergenic
CCGTTAGTCCATATAGCGTG+AGG 0.660374 1_1:+68674962 Msa0039140:CDS
CCACATGCCAATCACCAGAA+GGG 0.662073 1_1:-68671126 None:intergenic
CACTGCTTACAAATATCAGA+CGG 0.662165 1_1:-68674415 None:intergenic
TCTTATAAACATGAGTTATG+GGG 0.663780 1_1:+68674229 Msa0039140:CDS
CGAAAGATACATCATTCACA+AGG 0.663823 1_1:-68674289 None:intergenic
AACTCTACAAAACTCCCCAA+AGG 0.668256 1_1:+68679055 Msa0039140:CDS
TAGAAAAGGGGTAAGCTAGG+GGG 0.670871 1_1:-68683961 None:intergenic
TATCCACACTATGATGGACG+CGG 0.671252 1_1:+68669024 Msa0039140:CDS
ACACCGCGTCCATCATAGTG+TGG 0.674792 1_1:-68669027 None:intergenic
TCTTCTTAGAAAGCATTCCG+AGG 0.674829 1_1:+68671814 Msa0039140:CDS
ACAGGAGCAATAGCACCACC+AGG 0.676714 1_1:-68674730 None:intergenic
TATCCCTACCTTCAAACGAG+AGG 0.676878 1_1:-68671188 None:intergenic
AACCCGGGACCAGTTAGCAG+AGG 0.677676 1_1:+68683049 Msa0039140:CDS
TTGCATAAGCCCTTGCCCAG+CGG 0.678935 1_1:-68675040 None:intergenic
GTACCCTGGAATTAATGTTG+AGG 0.679471 1_1:-68679976 None:intergenic
CTAGCATCTGCTTTCCAGAG+GGG 0.683016 1_1:-68678659 None:intergenic
ATCATGTCCGTACCTCTGGG+TGG 0.683043 1_1:-68673862 None:intergenic
CTGTTGAACCTCCATCTGAG+GGG 0.684931 1_1:+68674552 Msa0039140:CDS
TGGAACAGAAGTGTTCTCCA+GGG 0.688845 1_1:-68674989 None:intergenic
CACAAAATATGGGATCCTGT+TGG 0.693669 1_1:+68683616 Msa0039140:CDS
CCAGCAACATGGGTGCCATG+AGG 0.693789 1_1:-68673824 None:intergenic
CTTGTGTTTGAAGATTGACG+AGG 0.696535 1_1:+68680527 Msa0039140:intron
TGCTACTGCGTTCCACCCAG+AGG 0.698762 1_1:+68673850 Msa0039140:CDS
TGCTTGCCAACAATCTACTG+AGG 0.703184 1_1:+68675469 Msa0039140:CDS
GTGGTGAAAGCTGATGCTGA+TGG 0.708988 1_1:+68670389 Msa0039140:CDS
GTCTGCGTAAGTGCTCCTGG+TGG 0.718220 1_1:+68674715 Msa0039140:CDS
TCAACCCAAGATGCACCATG+AGG 0.730624 1_1:-68677876 None:intergenic
ATGACAGATCCATCATCACG+GGG 0.741606 1_1:+68675425 Msa0039140:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAATATCATATAATTAA+TGG - chr1_1:68671889-68671908 None:intergenic 10.0%
!!! AATATAATATTTTGGATAAA+TGG + chr1_1:68671941-68671960 Msa0039140:intron 10.0%
!! TAAAAAAATCATATGAAAAT+TGG + chr1_1:68676650-68676669 Msa0039140:intron 10.0%
!! CTTAAAAAATAATTGAATTT+GGG - chr1_1:68679727-68679746 None:intergenic 10.0%
!! TCTTAAAAAATAATTGAATT+TGG - chr1_1:68679728-68679747 None:intergenic 10.0%
!! TCTCAAATATAATTAAAAAT+GGG + chr1_1:68680937-68680956 Msa0039140:intron 10.0%
!! TTATTAAGTGAACAAATTAA+TGG + chr1_1:68669676-68669695 Msa0039140:intron 15.0%
!! TTAATAAAGTGAGAAATTAA+GGG - chr1_1:68669753-68669772 None:intergenic 15.0%
!! ATTAATAAAGTGAGAAATTA+AGG - chr1_1:68669754-68669773 None:intergenic 15.0%
!! TATATATATATCATACCATT+TGG + chr1_1:68670468-68670487 Msa0039140:intron 15.0%
!! ACATATGATTGAAAATAAAA+AGG - chr1_1:68671511-68671530 None:intergenic 15.0%
!! AACTAAAAATATGATAGAAA+AGG - chr1_1:68671599-68671618 None:intergenic 15.0%
!!! CATGTTGAAATATAATATTT+TGG + chr1_1:68671933-68671952 Msa0039140:intron 15.0%
!! AATATGTTGTATGTAAAAAA+GGG - chr1_1:68673409-68673428 None:intergenic 15.0%
!! TAATATGTTGTATGTAAAAA+AGG - chr1_1:68673410-68673429 None:intergenic 15.0%
!!! TAATGAATAATGTTTTTCAT+AGG - chr1_1:68673906-68673925 None:intergenic 15.0%
!! ACATTATTCATTATAATGTA+TGG + chr1_1:68673913-68673932 Msa0039140:intron 15.0%
!!! ATTTTTTTAAGATAAAGACA+GGG - chr1_1:68675086-68675105 None:intergenic 15.0%
!!! AATTTTTTTAAGATAAAGAC+AGG - chr1_1:68675087-68675106 None:intergenic 15.0%
!!! ATAATTTACTTTGATTTCTA+CGG + chr1_1:68675684-68675703 Msa0039140:intron 15.0%
!!! GAATTTAGCAAATATTTTTA+GGG - chr1_1:68675724-68675743 None:intergenic 15.0%
!!! AGAATTTAGCAAATATTTTT+AGG - chr1_1:68675725-68675744 None:intergenic 15.0%
!! TTACACTTAAAATCTATAAA+AGG + chr1_1:68676473-68676492 Msa0039140:intron 15.0%
!! AATATGTAGGAATATAATTA+TGG - chr1_1:68676504-68676523 None:intergenic 15.0%
!!! TCTTAATTTTTTGTTTCATT+AGG + chr1_1:68677825-68677844 Msa0039140:intron 15.0%
!! AATATAAATGAAACAGATAA+TGG - chr1_1:68678715-68678734 None:intergenic 15.0%
!! TATAAATTATATCCTCTTTA+AGG - chr1_1:68679796-68679815 None:intergenic 15.0%
!! TTAATATGTAACAACATTTA+TGG + chr1_1:68680185-68680204 Msa0039140:intron 15.0%
!! TAATTATATTTGAGAGAATA+TGG - chr1_1:68680932-68680951 None:intergenic 15.0%
!! CTCTCAAATATAATTAAAAA+TGG + chr1_1:68680936-68680955 Msa0039140:intron 15.0%
!! GTTAATAATATAATCCAAAA+CGG + chr1_1:68680959-68680978 Msa0039140:intron 15.0%
!! AAAAAACTTAAAAACTTACT+TGG - chr1_1:68682211-68682230 None:intergenic 15.0%
!! CTCTATTTATTCAAAATAAA+GGG + chr1_1:68682509-68682528 Msa0039140:intron 15.0%
!! TTAAATAGAAAGGATAAATA+TGG - chr1_1:68682618-68682637 None:intergenic 15.0%
!!! ATAAACTTTTAATACACTTT+TGG - chr1_1:68682866-68682885 None:intergenic 15.0%
!!! TTGTTTAGCTAAATTTTTTA+TGG + chr1_1:68682893-68682912 Msa0039140:intron 15.0%
!! TAATAATCACAAAATTAACT+TGG + chr1_1:68684145-68684164 Msa0039140:three_prime_UTR 15.0%
!!! CTTATTTCAATAAACTTTTC+AGG - chr1_1:68669314-68669333 None:intergenic 20.0%
!! TAAATGTTGATCAAATTTGT+TGG + chr1_1:68669445-68669464 Msa0039140:intron 20.0%
!!! TGATCAAATTTGTATCTTTT+TGG + chr1_1:68669506-68669525 Msa0039140:intron 20.0%
!!! AAATTTGTATCTTTTTGGTT+TGG + chr1_1:68669511-68669530 Msa0039140:intron 20.0%
!! ATAATACATAATGTGTTGAA+AGG - chr1_1:68669803-68669822 None:intergenic 20.0%
!! TTCAACACATTATGTATTAT+TGG + chr1_1:68669803-68669822 Msa0039140:intron 20.0%
!!! ATTGATTTATTTACCAATCA+AGG - chr1_1:68670260-68670279 None:intergenic 20.0%
!! TGATTGGTAAATAAATCAAT+TGG + chr1_1:68670260-68670279 Msa0039140:intron 20.0%
!!! TCATTTGAAATATGCATTAT+TGG + chr1_1:68670294-68670313 Msa0039140:intron 20.0%
!! TTGTCTATTTCATGTAAAAT+TGG + chr1_1:68671064-68671083 Msa0039140:intron 20.0%
!!! ATTTCATGTAAAATTGGTTT+AGG + chr1_1:68671070-68671089 Msa0039140:intron 20.0%
!!! ATACTTTTTATATATGACAG+AGG + chr1_1:68671404-68671423 Msa0039140:intron 20.0%
!! AAAAAAAGAAGGAAAATACT+CGG - chr1_1:68671484-68671503 None:intergenic 20.0%
!!! AAACTGTTTTTGAAAAAAGA+AGG + chr1_1:68671541-68671560 Msa0039140:intron 20.0%
!!! AACTGTTTTTGAAAAAAGAA+GGG + chr1_1:68671542-68671561 Msa0039140:intron 20.0%
!! ATAATTTCATTTAACAACCT+CGG - chr1_1:68671834-68671853 None:intergenic 20.0%
!!! AATTGAAAGATTCTCATTTT+TGG + chr1_1:68672790-68672809 Msa0039140:intron 20.0%
!! TAAATTCATAGAAACTCAAA+AGG - chr1_1:68672955-68672974 None:intergenic 20.0%
!! AATGATGTACACATTTAAAT+AGG + chr1_1:68673037-68673056 Msa0039140:intron 20.0%
!! CAATTAATCTCTTGTAAAAT+TGG + chr1_1:68673981-68674000 Msa0039140:CDS 20.0%
!! ATATCTTGCATATCAATTAT+TGG + chr1_1:68674105-68674124 Msa0039140:intron 20.0%
!! ATCTTATAAACATGAGTTAT+GGG + chr1_1:68674228-68674247 Msa0039140:CDS 20.0%
!!! GGATTAGTTAAAACTTAAAA+TGG - chr1_1:68674321-68674340 None:intergenic 20.0%
!!! TATCTGTGGAAATTTTTAAT+TGG + chr1_1:68674600-68674619 Msa0039140:intron 20.0%
!! GCAAGTGAAATATATATTTA+GGG - chr1_1:68674632-68674651 None:intergenic 20.0%
!! AGCAAGTGAAATATATATTT+AGG - chr1_1:68674633-68674652 None:intergenic 20.0%
!! TTAAACAAATAATCAATGAC+AGG + chr1_1:68675144-68675163 Msa0039140:intron 20.0%
!! GCATGAATAAATTCATTTAA+AGG - chr1_1:68675325-68675344 None:intergenic 20.0%
!! AATCAATAGAATATAATAGC+AGG + chr1_1:68675359-68675378 Msa0039140:intron 20.0%
!!! TTTAGAAACTATAGTTTTCA+AGG - chr1_1:68675552-68675571 None:intergenic 20.0%
!! GAAAACTATAGTTTCTAAAT+CGG + chr1_1:68675553-68675572 Msa0039140:intron 20.0%
!!! TATAAAATTTTGATGTCTGT+GGG - chr1_1:68675764-68675783 None:intergenic 20.0%
!! GAAAACTATAGATTATTACA+GGG - chr1_1:68675811-68675830 None:intergenic 20.0%
!! TGAAAACTATAGATTATTAC+AGG - chr1_1:68675812-68675831 None:intergenic 20.0%
!! AAGCTATAAATTAGTTGAAA+AGG - chr1_1:68676250-68676269 None:intergenic 20.0%
!!! TTGTTTAACTTGTTTATAAG+AGG + chr1_1:68676268-68676287 Msa0039140:intron 20.0%
!!! TTTTTTGTTCTATTTAACAG+AGG - chr1_1:68676406-68676425 None:intergenic 20.0%
!! AGCTACTTAAATAAATCTTT+AGG + chr1_1:68676820-68676839 Msa0039140:intron 20.0%
!! TTTAAGTAAGAAACATGATA+AGG - chr1_1:68676846-68676865 None:intergenic 20.0%
!! ATTAACATTGTCATAATTTG+AGG + chr1_1:68676950-68676969 Msa0039140:intron 20.0%
!! TTGAAACAAAACTATAGATT+AGG - chr1_1:68677235-68677254 None:intergenic 20.0%
!! AAAATTAAGACAATAAGCAT+TGG - chr1_1:68677815-68677834 None:intergenic 20.0%
!! CTATATATTTCCTTTCTATA+TGG - chr1_1:68677851-68677870 None:intergenic 20.0%
!! AAAGAAGAATTAAGAAAAGT+GGG + chr1_1:68678292-68678311 Msa0039140:intron 20.0%
!! TAAGGTTATCTTGTAAAATT+TGG + chr1_1:68678495-68678514 Msa0039140:intron 20.0%
!!! GTTGTATTTTGAAAACTTTA+TGG + chr1_1:68679458-68679477 Msa0039140:intron 20.0%
!! AAAATACATCATCAAAACTA+AGG + chr1_1:68679821-68679840 Msa0039140:intron 20.0%
!! TTTAAATGTAAACCTTTAAG+AGG - chr1_1:68680027-68680046 None:intergenic 20.0%
!!! ATAAAAGAAGGATTTTATCT+TGG + chr1_1:68680087-68680106 Msa0039140:CDS 20.0%
!! ATGTTGTTACATATTAACAA+TGG - chr1_1:68680182-68680201 None:intergenic 20.0%
!! AAAAAATGATAGATAAACCT+TGG + chr1_1:68681096-68681115 Msa0039140:intron 20.0%
!!! TTAAGTGAATTTTTTGGATA+TGG - chr1_1:68681238-68681257 None:intergenic 20.0%
!!! AGAACTTTAAGTGAATTTTT+TGG - chr1_1:68681244-68681263 None:intergenic 20.0%
!!! TTTGCTATTATTTGTAATCT+AGG - chr1_1:68681608-68681627 None:intergenic 20.0%
!!! CTTCAAAGATATTAGATTTT+AGG - chr1_1:68681850-68681869 None:intergenic 20.0%
!! ATGATAATTACATAATTGCA+CGG - chr1_1:68682171-68682190 None:intergenic 20.0%
!!! TTTTTTTAAATTCACGACAT+TGG + chr1_1:68682225-68682244 Msa0039140:intron 20.0%
!!! TTTTTTAAATTCACGACATT+GGG + chr1_1:68682226-68682245 Msa0039140:intron 20.0%
!! GTTGTGTAAATGATTTAAAA+AGG + chr1_1:68682290-68682309 Msa0039140:intron 20.0%
!!! CCTTTATTTTGAATAAATAG+AGG - chr1_1:68682511-68682530 None:intergenic 20.0%
!! CCTCTATTTATTCAAAATAA+AGG + chr1_1:68682508-68682527 Msa0039140:intron 20.0%
!!! TTTTGCACAATTAAATAGAA+AGG - chr1_1:68682628-68682647 None:intergenic 20.0%
!!! TTTTTTAGTTTGCATGTTAT+TGG + chr1_1:68682974-68682993 Msa0039140:intron 20.0%
!! TTTGTTTGATGAAAACTTTA+AGG + chr1_1:68683565-68683584 Msa0039140:CDS 20.0%
!! AAAAAAGAATAGAAGAGAAA+GGG - chr1_1:68683731-68683750 None:intergenic 20.0%
!!! TTATAATGATCAAAGAGTAT+TGG + chr1_1:68683773-68683792 Msa0039140:intron 20.0%
!! TTTCAATTATATATGCATCA+AGG + chr1_1:68684093-68684112 Msa0039140:three_prime_UTR 20.0%
!! TTCAATTATATATGCATCAA+GGG + chr1_1:68684094-68684113 Msa0039140:three_prime_UTR 20.0%
! CTCTATATTATAGTCTATCT+TGG - chr1_1:68669599-68669618 None:intergenic 25.0%
! CGAACTTGTAATAATTCAAT+TGG + chr1_1:68669971-68669990 Msa0039140:intron 25.0%
!! ATTTTCCATACGAACTAATA+TGG - chr1_1:68670129-68670148 None:intergenic 25.0%
!! TCAAGGATATCAAGAATTTT+TGG - chr1_1:68670243-68670262 None:intergenic 25.0%
! AAATTCTTGATATCCTTGAT+TGG + chr1_1:68670244-68670263 Msa0039140:CDS 25.0%
!!! TTTTTTTTAATCTTCAGCAC+TGG + chr1_1:68670341-68670360 Msa0039140:intron 25.0%
!!! TTTTTTTAATCTTCAGCACT+GGG + chr1_1:68670342-68670361 Msa0039140:intron 25.0%
! AGATATTGATACATCAAAAG+TGG + chr1_1:68670370-68670389 Msa0039140:CDS 25.0%
!! TCACACTTCTAATTTTTGAA+TGG + chr1_1:68670616-68670635 Msa0039140:intron 25.0%
!! CACACTTCTAATTTTTGAAT+GGG + chr1_1:68670617-68670636 Msa0039140:intron 25.0%
!! ATTTTTGAATGGGAAAAGTA+TGG + chr1_1:68670627-68670646 Msa0039140:intron 25.0%
!!! TTACAGGTTCAAGTTTATTT+TGG - chr1_1:68670653-68670672 None:intergenic 25.0%
! CTTGATAAGAGTTTATAAAG+AGG + chr1_1:68670721-68670740 Msa0039140:intron 25.0%
! ATTAATCCATGTTGAAATTG+AGG - chr1_1:68670798-68670817 None:intergenic 25.0%
! CTATAGAAAAATCATCAGAA+CGG - chr1_1:68670964-68670983 None:intergenic 25.0%
!!! AAAATTTTAGGAGGAGAAAA+GGG - chr1_1:68671274-68671293 None:intergenic 25.0%
!!! TAAAATTTTAGGAGGAGAAA+AGG - chr1_1:68671275-68671294 None:intergenic 25.0%
!! CTTTCTGCAGATAAAATTTT+AGG - chr1_1:68671286-68671305 None:intergenic 25.0%
! AGAAAGAAAGAAAGAAAAAG+TGG + chr1_1:68671300-68671319 Msa0039140:intron 25.0%
! GAAAGAAAGAAAGAAAAAGT+GGG + chr1_1:68671301-68671320 Msa0039140:intron 25.0%
! AAAAAGGTGAGAAAAAAAGA+AGG - chr1_1:68671495-68671514 None:intergenic 25.0%
!!! ACTGTTTTTGAAAAAAGAAG+GGG + chr1_1:68671543-68671562 Msa0039140:intron 25.0%
! TAAGAAGATCAAGTTTATTC+TGG - chr1_1:68671802-68671821 None:intergenic 25.0%
! CAAGTCAACAAAGTAATAAA+GGG + chr1_1:68672186-68672205 Msa0039140:intron 25.0%
!!! TTTTAGAGCTATGATGATAA+AGG + chr1_1:68672562-68672581 Msa0039140:intron 25.0%
!! TTTAGAGCTATGATGATAAA+GGG + chr1_1:68672563-68672582 Msa0039140:intron 25.0%
!!! TTGGTCTAAATTTTAATCTC+AGG + chr1_1:68672737-68672756 Msa0039140:intron 25.0%
! GTTGAAAAGACAAATTAAAG+AGG - chr1_1:68672901-68672920 None:intergenic 25.0%
! TTGATTCAACAGACAATAAA+AGG - chr1_1:68672923-68672942 None:intergenic 25.0%
!! ATTACCTAGTATTTACGTTT+TGG + chr1_1:68673426-68673445 Msa0039140:intron 25.0%
! CACATTAATAGTTTAAGCTT+CGG - chr1_1:68673618-68673637 None:intergenic 25.0%
! TTTAAATTTGAACATCTTCC+AGG - chr1_1:68673677-68673696 None:intergenic 25.0%
! TAATGTATGGTATTATTGTC+AGG + chr1_1:68673926-68673945 Msa0039140:intron 25.0%
! GATCTTATAAACATGAGTTA+TGG + chr1_1:68674227-68674246 Msa0039140:CDS 25.0%
! TCTTATAAACATGAGTTATG+GGG + chr1_1:68674229-68674248 Msa0039140:CDS 25.0%
! TGGAAAATAACACATATAAC+TGG - chr1_1:68674342-68674361 None:intergenic 25.0%
!! GCTTTGGGTTATTTATATTT+AGG + chr1_1:68674379-68674398 Msa0039140:intron 25.0%
! TTGGGTTATTTATATTTAGG+TGG + chr1_1:68674382-68674401 Msa0039140:intron 25.0%
!! AGATTATATGATTTAGTTCG+TGG + chr1_1:68674876-68674895 Msa0039140:intron 25.0%
! TTATACACATCAGGATATTA+AGG - chr1_1:68674918-68674937 None:intergenic 25.0%
! TTTATTTGATACCAAACACA+TGG - chr1_1:68675203-68675222 None:intergenic 25.0%
! CAAATAAACATCAATCAATC+TGG + chr1_1:68675215-68675234 Msa0039140:CDS 25.0%
!!! TTTTGTTTCTCGAATGAAAA+AGG - chr1_1:68675279-68675298 None:intergenic 25.0%
!! TTTTTCATTCGAGAAACAAA+AGG + chr1_1:68675278-68675297 Msa0039140:intron 25.0%
! GTCATCAACAGTTATATAAA+GGG - chr1_1:68675410-68675429 None:intergenic 25.0%
! TGTCATCAACAGTTATATAA+AGG - chr1_1:68675411-68675430 None:intergenic 25.0%
! TTTCTAAATCGGATTAAGAT+TGG + chr1_1:68675564-68675583 Msa0039140:intron 25.0%
!!! GTATAAAATTTTGATGTCTG+TGG - chr1_1:68675765-68675784 None:intergenic 25.0%
! AATATGACACAAGATAAACA+TGG - chr1_1:68675850-68675869 None:intergenic 25.0%
! ACAGTACAAAATCATCTTAT+AGG + chr1_1:68676707-68676726 Msa0039140:intron 25.0%
!! CAACTTTGTTATGATTAAAG+AGG - chr1_1:68676877-68676896 None:intergenic 25.0%
!!! AATGTCTATTGTTACTTTCA+AGG + chr1_1:68677039-68677058 Msa0039140:intron 25.0%
!!! ATGTCTATTGTTACTTTCAA+GGG + chr1_1:68677040-68677059 Msa0039140:intron 25.0%
! ATTATAGAATGACAAGTTCA+AGG - chr1_1:68677094-68677113 None:intergenic 25.0%
! TTTGAGAAGAGTTTATAAAG+AGG + chr1_1:68677504-68677523 Msa0039140:intron 25.0%
!!! AGAAAAAGTGTTGAAATTTG+AGG - chr1_1:68677575-68677594 None:intergenic 25.0%
!!! AATTTCAACACTTTTTCTTC+TGG + chr1_1:68677577-68677596 Msa0039140:intron 25.0%
! AATTTGGATTTACATCTACA+TGG + chr1_1:68677617-68677636 Msa0039140:intron 25.0%
!! TTCTAAAAACATTGCGTATA+GGG - chr1_1:68677712-68677731 None:intergenic 25.0%
!! TTTCTAAAAACATTGCGTAT+AGG - chr1_1:68677713-68677732 None:intergenic 25.0%
! TTAAGAATATAAACCGGAAT+TGG - chr1_1:68677785-68677804 None:intergenic 25.0%
! TTGGACTTAAGAATATAAAC+CGG - chr1_1:68677791-68677810 None:intergenic 25.0%
! ATCAAAACTTGATAAGTTCA+TGG - chr1_1:68677907-68677926 None:intergenic 25.0%
! ACTTAACTTCACATAATCTT+AGG - chr1_1:68677976-68677995 None:intergenic 25.0%
! AGATTATGTGAAGTTAAGTA+TGG + chr1_1:68677977-68677996 Msa0039140:intron 25.0%
!! GTAGAAAGCATGTTAAAAAA+AGG - chr1_1:68678004-68678023 None:intergenic 25.0%
! GAAAGAAGAATTAAGAAAAG+TGG + chr1_1:68678291-68678310 Msa0039140:intron 25.0%
! AATCACAAACATAAAGGAAT+AGG - chr1_1:68678523-68678542 None:intergenic 25.0%
! ATTCCTTTATGTTTGTGATT+TGG + chr1_1:68678523-68678542 Msa0039140:intron 25.0%
! TTCCTTTATGTTTGTGATTT+GGG + chr1_1:68678524-68678543 Msa0039140:intron 25.0%
!!! TTATATTCATGAGCTTTAGA+TGG + chr1_1:68678728-68678747 Msa0039140:intron 25.0%
! AAATACCATTTCTAAATGGT+CGG + chr1_1:68678817-68678836 Msa0039140:CDS 25.0%
! TATGATTTCCGATTCAAATA+AGG + chr1_1:68678872-68678891 Msa0039140:CDS 25.0%
! ACAGTTTACAACTATATGTA+AGG + chr1_1:68679083-68679102 Msa0039140:CDS 25.0%
!! GTTATTGAAGATAAGTTTTG+TGG + chr1_1:68679229-68679248 Msa0039140:intron 25.0%
!!! AGATAAGTTTTGTGGTTTTA+AGG + chr1_1:68679237-68679256 Msa0039140:intron 25.0%
! ATAACAAGTGGAATATTTCT+AGG + chr1_1:68679314-68679333 Msa0039140:intron 25.0%
!!! TCATGATGTTTTATTGTTTC+AGG + chr1_1:68679356-68679375 Msa0039140:intron 25.0%
! TGAGAGAAATTTAGAAGATA+AGG + chr1_1:68679429-68679448 Msa0039140:CDS 25.0%
! AGTTAAAGTGAAAGATACAA+GGG - chr1_1:68679487-68679506 None:intergenic 25.0%
! TTCCAAAAAATTTAAGCACA+TGG + chr1_1:68679617-68679636 Msa0039140:intron 25.0%
!!! GTATGTTTGTCTTTATTTTC+AGG + chr1_1:68679887-68679906 Msa0039140:intron 25.0%
!!! TTTATTTTCAGGACATCATT+CGG + chr1_1:68679898-68679917 Msa0039140:intron 25.0%
! AATTAATGTTGAGGACTTAA+AGG - chr1_1:68679970-68679989 None:intergenic 25.0%
!! CTTATTGATAGCATAAAAGA+AGG + chr1_1:68680075-68680094 Msa0039140:intron 25.0%
! AAGAAAAGAGAATATACCTT+GGG - chr1_1:68680135-68680154 None:intergenic 25.0%
! TAAGAAAAGAGAATATACCT+TGG - chr1_1:68680136-68680155 None:intergenic 25.0%
! TTATATAGTTCCTCCAAATA+AGG + chr1_1:68680332-68680351 Msa0039140:CDS 25.0%
!! TTATGCTAGTTTATATACAC+CGG - chr1_1:68680464-68680483 None:intergenic 25.0%
! AAAAATGTGGATAGAAAACA+AGG - chr1_1:68680646-68680665 None:intergenic 25.0%
!! TGTTTTCTATCCACATTTTT+TGG + chr1_1:68680646-68680665 Msa0039140:intron 25.0%
! GTTGAAGCTAATTATCTTTA+CGG + chr1_1:68680831-68680850 Msa0039140:intron 25.0%
!!! ATATTAGATTTTAGGAGAAG+GGG - chr1_1:68681842-68681861 None:intergenic 25.0%
!!! GATATTAGATTTTAGGAGAA+GGG - chr1_1:68681843-68681862 None:intergenic 25.0%
!!! AGATATTAGATTTTAGGAGA+AGG - chr1_1:68681844-68681863 None:intergenic 25.0%
! GGGAGAAAAAAATTAAAATC+AGG + chr1_1:68682529-68682548 Msa0039140:intron 25.0%
!! CTGCATGGAAAAATAAATTT+TGG + chr1_1:68682925-68682944 Msa0039140:intron 25.0%
!! AAGTTTTCATCAAACAAATC+TGG - chr1_1:68683563-68683582 None:intergenic 25.0%
! GAAAAAAGAATAGAAGAGAA+AGG - chr1_1:68683732-68683751 None:intergenic 25.0%
!!! CATAAGCTTTAAGATATCTT+AGG + chr1_1:68684043-68684062 Msa0039140:three_prime_UTR 25.0%
ATCTTCTGATGAAGAAGTTT+GGG - chr1_1:68668789-68668808 None:intergenic 30.0%
!! ATTAAGCATTGGTTTGGAAA+CGG - chr1_1:68668830-68668849 None:intergenic 30.0%
ATACTGTTTGGAAAAGCTTA+CGG - chr1_1:68669372-68669391 None:intergenic 30.0%
GCTTATTTGAGCTTACTTAT+TGG - chr1_1:68669409-68669428 None:intergenic 30.0%
ATCAACATTTACAACCTACT+TGG - chr1_1:68669436-68669455 None:intergenic 30.0%
TGATCAACAAGCAAAAGAAA+GGG - chr1_1:68669492-68669511 None:intergenic 30.0%
TTGATCAACAAGCAAAAGAA+AGG - chr1_1:68669493-68669512 None:intergenic 30.0%
!!! TTTGTATCTTTTTGGTTTGG+CGG + chr1_1:68669514-68669533 Msa0039140:intron 30.0%
GTAATCAATGATATCATGGT+AGG - chr1_1:68669572-68669591 None:intergenic 30.0%
CCTTGTAATCAATGATATCA+TGG - chr1_1:68669576-68669595 None:intergenic 30.0%
! CCATGATATCATTGATTACA+AGG + chr1_1:68669573-68669592 Msa0039140:intron 30.0%
! CTGATACACTCTTTTTAACA+CGG + chr1_1:68669644-68669663 Msa0039140:intron 30.0%
! CATAATGTGTTGAAAGGTTT+TGG - chr1_1:68669797-68669816 None:intergenic 30.0%
ATTACTAGCCAAAATGTATG+TGG - chr1_1:68669885-68669904 None:intergenic 30.0%
ATAGATGTTAGTCGACAAAA+CGG - chr1_1:68670049-68670068 None:intergenic 30.0%
GTTTAGTGTTACGCTTTAAT+TGG + chr1_1:68670088-68670107 Msa0039140:intron 30.0%
ATACACCATATTAGTTCGTA+TGG + chr1_1:68670121-68670140 Msa0039140:intron 30.0%
!! TGTTTTCACTTTTCAGATTC+TGG + chr1_1:68670171-68670190 Msa0039140:intron 30.0%
ATAAACTTGAACCTGTAAAC+TGG + chr1_1:68670655-68670674 Msa0039140:intron 30.0%
AACCTGTAAACTGGATTATT+GGG + chr1_1:68670664-68670683 Msa0039140:intron 30.0%
! GAGTCTTATCTATCTGATAT+GGG - chr1_1:68670702-68670721 None:intergenic 30.0%
! AGAGTCTTATCTATCTGATA+TGG - chr1_1:68670703-68670722 None:intergenic 30.0%
GATAAGAGTTTATAAAGAGG+AGG + chr1_1:68670724-68670743 Msa0039140:intron 30.0%
! TCTGAAGTCAAATTAATACC+AGG + chr1_1:68670817-68670836 Msa0039140:intron 30.0%
ATTCAAAACACACAAAATCC+TGG - chr1_1:68670838-68670857 None:intergenic 30.0%
ACAAAATCCTGGTATTAATC+AGG - chr1_1:68670876-68670895 None:intergenic 30.0%
GTTGCTCTTTAGACTTAATA+TGG + chr1_1:68671231-68671250 Msa0039140:intron 30.0%
AAAGGGGAAATTTGATTGAT+TGG - chr1_1:68671257-68671276 None:intergenic 30.0%
!! AAATTTTAGGAGGAGAAAAG+GGG - chr1_1:68671273-68671292 None:intergenic 30.0%
! TCTGCAGATAAAATTTTAGG+AGG - chr1_1:68671283-68671302 None:intergenic 30.0%
!! ACAACTTAGTGATTTTGATC+AGG + chr1_1:68671361-68671380 Msa0039140:CDS 30.0%
ACTCGGACAATAAAAAATAC+AGG - chr1_1:68671467-68671486 None:intergenic 30.0%
TTTATTCCCTTCTTTGATGA+CGG + chr1_1:68671568-68671587 Msa0039140:intron 30.0%
GTATCACATTTCATGTTACA+TGG - chr1_1:68671720-68671739 None:intergenic 30.0%
TTCTAATGCGATGTGAATAT+GGG + chr1_1:68672008-68672027 Msa0039140:intron 30.0%
! CCTTTATTACTTTGTTGACT+TGG - chr1_1:68672188-68672207 None:intergenic 30.0%
CCAAGTCAACAAAGTAATAA+AGG + chr1_1:68672185-68672204 Msa0039140:intron 30.0%
AAGTAATAAAGGGACTGATT+AGG + chr1_1:68672196-68672215 Msa0039140:intron 30.0%
AAAACAGAGAACAGTAATGT+TGG - chr1_1:68672322-68672341 None:intergenic 30.0%
AGTTTGACACAATTCATTCA+TGG + chr1_1:68672426-68672445 Msa0039140:intron 30.0%
TTGTACCCTTGACTAATTAT+AGG + chr1_1:68672689-68672708 Msa0039140:CDS 30.0%
CACTACCTATAATTAGTCAA+GGG - chr1_1:68672697-68672716 None:intergenic 30.0%
TCACTACCTATAATTAGTCA+AGG - chr1_1:68672698-68672717 None:intergenic 30.0%
GTACATTTGATTGTTAGTGT+TGG + chr1_1:68672718-68672737 Msa0039140:intron 30.0%
!! AGATTCTCATTTTTGGACAA+AGG + chr1_1:68672797-68672816 Msa0039140:intron 30.0%
TTGTGATGTGTATGGAAAAT+GGG - chr1_1:68672841-68672860 None:intergenic 30.0%
TTTGTGATGTGTATGGAAAA+TGG - chr1_1:68672842-68672861 None:intergenic 30.0%
! TGACTAATTTGTGATGTGTA+TGG - chr1_1:68672849-68672868 None:intergenic 30.0%
GCTTATATGTCTTGACAAAA+AGG - chr1_1:68672879-68672898 None:intergenic 30.0%
!! CTTTGAAATATGAGTGACAA+GGG - chr1_1:68672983-68673002 None:intergenic 30.0%
!! TCTTTGAAATATGAGTGACA+AGG - chr1_1:68672984-68673003 None:intergenic 30.0%
ATTTCAAAGAAATGCTGAAC+AGG + chr1_1:68672994-68673013 Msa0039140:intron 30.0%
TACATACAACATATTACCTG+AGG + chr1_1:68673229-68673248 Msa0039140:intron 30.0%
ACATACAACATATTACCTGA+GGG + chr1_1:68673230-68673249 Msa0039140:intron 30.0%
TAATAGTTTAAGCTTCGGTA+CGG - chr1_1:68673613-68673632 None:intergenic 30.0%
CGAAGCTTAAACTATTAATG+TGG + chr1_1:68673616-68673635 Msa0039140:intron 30.0%
TTTCATAGGATTTGCACTAT+GGG - chr1_1:68673892-68673911 None:intergenic 30.0%
! TTTTCATAGGATTTGCACTA+TGG - chr1_1:68673893-68673912 None:intergenic 30.0%
ATATTTCACTTGCTTATGCT+AGG + chr1_1:68674639-68674658 Msa0039140:intron 30.0%
ATGAAAAAGGCAAAATTTCC+AGG - chr1_1:68675266-68675285 None:intergenic 30.0%
TAACCAATTCAGAGTACAAA+GGG - chr1_1:68675999-68676018 None:intergenic 30.0%
ATAACCAATTCAGAGTACAA+AGG - chr1_1:68676000-68676019 None:intergenic 30.0%
TTTGTAGTACTTATTGACAG+TGG + chr1_1:68676031-68676050 Msa0039140:intron 30.0%
ACTTGTTTATAAGAGGTCTT+TGG + chr1_1:68676275-68676294 Msa0039140:intron 30.0%
TATGAAAATTGGAATGCACT+CGG + chr1_1:68676661-68676680 Msa0039140:intron 30.0%
GTACAAAATCATCTTATAGG+CGG + chr1_1:68676710-68676729 Msa0039140:intron 30.0%
TACAAAATCATCTTATAGGC+GGG + chr1_1:68676711-68676730 Msa0039140:intron 30.0%
! CTTTGTTATGATTAAAGAGG+TGG - chr1_1:68676874-68676893 None:intergenic 30.0%
TATTACGTAATGAGCTAATG+AGG - chr1_1:68676906-68676925 None:intergenic 30.0%
! CATAATTTGAGGCTTGTATT+TGG + chr1_1:68676961-68676980 Msa0039140:intron 30.0%
! GTTTGAAAGACAAGTTTTTG+AGG - chr1_1:68677139-68677158 None:intergenic 30.0%
! GTAATTGGAATTCTGAAAAG+AGG - chr1_1:68677376-68677395 None:intergenic 30.0%
! ATCTCTGAAAATGAAACTTG+TGG - chr1_1:68677433-68677452 None:intergenic 30.0%
AAGAAAATGCTCAAACATCA+AGG - chr1_1:68677673-68677692 None:intergenic 30.0%
! TTGATGTTTGAGCATTTTCT+TGG + chr1_1:68677672-68677691 Msa0039140:intron 30.0%
TCAAATTGAGTATCCAATTC+CGG + chr1_1:68677769-68677788 Msa0039140:intron 30.0%
!! TAAGACAATAAGCATTGGTT+TGG - chr1_1:68677810-68677829 None:intergenic 30.0%
TTTCATTAGGCCATATAGAA+AGG + chr1_1:68677838-68677857 Msa0039140:intron 30.0%
!! AAATATATAGAAGTGCCTCA+TGG + chr1_1:68677861-68677880 Msa0039140:CDS 30.0%
TATCCACAAAAAATCTTCTG+GGG - chr1_1:68677932-68677951 None:intergenic 30.0%
GTATCCACAAAAAATCTTCT+GGG - chr1_1:68677933-68677952 None:intergenic 30.0%
TGTATCCACAAAAAATCTTC+TGG - chr1_1:68677934-68677953 None:intergenic 30.0%
!!! ATTTTTTGTGGATACAGTTC+AGG + chr1_1:68677938-68677957 Msa0039140:CDS 30.0%
! TACCTTAAAGGTGAAGTTTT+TGG - chr1_1:68678094-68678113 None:intergenic 30.0%
AAATTCCAGATTGTGTTTCA+TGG + chr1_1:68678361-68678380 Msa0039140:intron 30.0%
TTATACCATGAAACACAATC+TGG - chr1_1:68678369-68678388 None:intergenic 30.0%
AAGAGGTAATTGTACTTGAT+GGG + chr1_1:68678398-68678417 Msa0039140:CDS 30.0%
ACCTGTAGCAAATCTAAATA+AGG + chr1_1:68678477-68678496 Msa0039140:CDS 30.0%
!! ACCTTATTTAGATTTGCTAC+AGG - chr1_1:68678481-68678500 None:intergenic 30.0%
ATCCCAAATCACAAACATAA+AGG - chr1_1:68678529-68678548 None:intergenic 30.0%
! TGTGATTTGGGATAATAAAG+AGG + chr1_1:68678536-68678555 Msa0039140:intron 30.0%
TTAACATAAATTGAGAGACG+AGG - chr1_1:68678566-68678585 None:intergenic 30.0%
AGGTTATGATTTCAGATACA+AGG + chr1_1:68678761-68678780 Msa0039140:intron 30.0%
TTTCAGATACAAGGTCAAAT+TGG + chr1_1:68678770-68678789 Msa0039140:intron 30.0%
CCATTTAGAAATGGTATTTG+AGG - chr1_1:68678816-68678835 None:intergenic 30.0%
CCTCAAATACCATTTCTAAA+TGG + chr1_1:68678813-68678832 Msa0039140:CDS 30.0%
TATATCCGACCATTTAGAAA+TGG - chr1_1:68678825-68678844 None:intergenic 30.0%
! TCGCAATACCTTATTTGAAT+CGG - chr1_1:68678883-68678902 None:intergenic 30.0%
! CCTCATCTTTAAAAGCATAA+AGG - chr1_1:68678916-68678935 None:intergenic 30.0%
!! CCTTTATGCTTTTAAAGATG+AGG + chr1_1:68678913-68678932 Msa0039140:intron 30.0%
!! ATGCTTTTAAAGATGAGGAT+TGG + chr1_1:68678918-68678937 Msa0039140:intron 30.0%
!! TGCTTTTAAAGATGAGGATT+GGG + chr1_1:68678919-68678938 Msa0039140:intron 30.0%
TTATAGCGAGTATATTCAAG+TGG + chr1_1:68679019-68679038 Msa0039140:intron 30.0%
TGTAAACTGTATTCTCCTTT+GGG - chr1_1:68679073-68679092 None:intergenic 30.0%
TTGTAAACTGTATTCTCCTT+TGG - chr1_1:68679074-68679093 None:intergenic 30.0%
ACTAAATGGAAAGAAACACA+AGG - chr1_1:68679160-68679179 None:intergenic 30.0%
CAGAATAGCTATGAACTAAA+TGG - chr1_1:68679174-68679193 None:intergenic 30.0%
!! GTTGGAGTTTTAATAACAAG+TGG + chr1_1:68679302-68679321 Msa0039140:intron 30.0%
CAGTTAAAGTGAAAGATACA+AGG - chr1_1:68679488-68679507 None:intergenic 30.0%
CAGTGACATTTGTAATAACA+TGG + chr1_1:68679508-68679527 Msa0039140:intron 30.0%
!!! AGCCATGTGCTTAAATTTTT+TGG - chr1_1:68679622-68679641 None:intergenic 30.0%
CTGAATTAGAAGTAACATAG+AGG + chr1_1:68679640-68679659 Msa0039140:intron 30.0%
AAGTAGGGAGAATTAGAATT+AGG + chr1_1:68679680-68679699 Msa0039140:intron 30.0%
TGTGAAATGTGTACGTTAAT+GGG - chr1_1:68679770-68679789 None:intergenic 30.0%
TTGTGAAATGTGTACGTTAA+TGG - chr1_1:68679771-68679790 None:intergenic 30.0%
CATTTCACAATACCTTAAAG+AGG + chr1_1:68679781-68679800 Msa0039140:intron 30.0%
! TTCTCTTTTCTTAACCACTT+AGG + chr1_1:68680143-68680162 Msa0039140:intron 30.0%
ACATATTAACAATGGTCCTA+TGG - chr1_1:68680174-68680193 None:intergenic 30.0%
TATGGAAAACTATCATTTGC+CGG + chr1_1:68680258-68680277 Msa0039140:CDS 30.0%
AAGAAATTCGATATGATGCA+GGG - chr1_1:68680314-68680333 None:intergenic 30.0%
TAAGAAATTCGATATGATGC+AGG - chr1_1:68680315-68680334 None:intergenic 30.0%
! AATAAGTCAACCTTATTTGG+AGG - chr1_1:68680345-68680364 None:intergenic 30.0%
GAGAATAAGTCAACCTTATT+TGG - chr1_1:68680348-68680367 None:intergenic 30.0%
ATGGAAGATTCTACAAAGAT+GGG - chr1_1:68680913-68680932 None:intergenic 30.0%
TATGGAAGATTCTACAAAGA+TGG - chr1_1:68680914-68680933 None:intergenic 30.0%
! AAACTAGAATTTGTCCGTTT+TGG - chr1_1:68680976-68680995 None:intergenic 30.0%
! TATATTTTCGTATGCTTTGC+AGG + chr1_1:68680995-68681014 Msa0039140:intron 30.0%
TTTACACACACAAGATTATC+TGG + chr1_1:68681168-68681187 Msa0039140:intron 30.0%
!!! ATTTTTTGGATATGGAGAGA+TGG - chr1_1:68681230-68681249 None:intergenic 30.0%
GGCTAACTTAAGTTATCATT+AGG - chr1_1:68681325-68681344 None:intergenic 30.0%
! ATGATAACTTAAGTTAGCCT+TGG + chr1_1:68681326-68681345 Msa0039140:intron 30.0%
ATCTAAACTCCTAGTTTAAG+TGG + chr1_1:68681467-68681486 Msa0039140:intron 30.0%
TATCTAACATTTGATTACCG+TGG - chr1_1:68681755-68681774 None:intergenic 30.0%
ATTGTTTCAAGCTAACTGTT+AGG - chr1_1:68681812-68681831 None:intergenic 30.0%
GAGACAATACTTACTGTTAA+TGG + chr1_1:68681944-68681963 Msa0039140:intron 30.0%
ATTTGCCAATCAACATTCTT+TGG + chr1_1:68682073-68682092 Msa0039140:intron 30.0%
AGATACCAAAGAATGTTGAT+TGG - chr1_1:68682081-68682100 None:intergenic 30.0%
GATAATTAATGCAGCAAATG+AGG + chr1_1:68682346-68682365 Msa0039140:intron 30.0%
TGATACATAAGTAGGTAACA+GGG - chr1_1:68682481-68682500 None:intergenic 30.0%
TGTGCAAAATGCAAAACTTT+AGG + chr1_1:68682639-68682658 Msa0039140:intron 30.0%
GTGCAAAATGCAAAACTTTA+GGG + chr1_1:68682640-68682659 Msa0039140:intron 30.0%
!! TTATTTTTCCATGCAGAATG+AGG - chr1_1:68682921-68682940 None:intergenic 30.0%
!! GGTTGATTCTATCTTTTTCT+TGG - chr1_1:68683033-68683052 None:intergenic 30.0%
AGAAAAAGATAGAATCAACC+CGG + chr1_1:68683033-68683052 Msa0039140:CDS 30.0%
! CAGGGATATTTTCTAAATTC+TGG - chr1_1:68683185-68683204 None:intergenic 30.0%
TGCTTGTGCTATGTAAAATT+CGG + chr1_1:68683333-68683352 Msa0039140:intron 30.0%
! AAGAGTGTATTTGAGTGTTA+TGG + chr1_1:68683356-68683375 Msa0039140:intron 30.0%
! ACTTTAAGGAACTGAAGAAA+TGG + chr1_1:68683579-68683598 Msa0039140:CDS 30.0%
! CTTTAAGGAACTGAAGAAAT+GGG + chr1_1:68683580-68683599 Msa0039140:CDS 30.0%
ACGTTAAGTGCACAAAATAT+GGG + chr1_1:68683606-68683625 Msa0039140:CDS 30.0%
!! TGATCAAAGAGTATTGGTAA+AGG + chr1_1:68683779-68683798 Msa0039140:intron 30.0%
!! GATCAAAGAGTATTGGTAAA+GGG + chr1_1:68683780-68683799 Msa0039140:intron 30.0%
TCATATAGTTTCTTCTTTGC+AGG - chr1_1:68683901-68683920 None:intergenic 30.0%
! CATCCAATCATGTTTTGTAT+GGG + chr1_1:68684070-68684089 Msa0039140:three_prime_UTR 30.0%
AAACCCATACAAAACATGAT+TGG - chr1_1:68684076-68684095 None:intergenic 30.0%
GTGATTATTACAATGTCCAA+GGG - chr1_1:68684135-68684154 None:intergenic 30.0%
TGTGATTATTACAATGTCCA+AGG - chr1_1:68684136-68684155 None:intergenic 30.0%
AGAAGAAGAAGAAGAAGAAG+CGG - chr1_1:68668596-68668615 None:intergenic 35.0%
GATTGATCAGAAATGGAGAA+GGG - chr1_1:68668750-68668769 None:intergenic 35.0%
AGATTGATCAGAAATGGAGA+AGG - chr1_1:68668751-68668770 None:intergenic 35.0%
CATCTTCTGATGAAGAAGTT+TGG - chr1_1:68668790-68668809 None:intergenic 35.0%
TCTTCATCAGAAGATGCAAT+TGG + chr1_1:68668794-68668813 Msa0039140:CDS 35.0%
!! GCAAAGATTAAGCATTGGTT+TGG - chr1_1:68668836-68668855 None:intergenic 35.0%
GAAGAGCAAAGATTAAGCAT+TGG - chr1_1:68668841-68668860 None:intergenic 35.0%
CTTATGCCTAAAACGGAAAT+TGG + chr1_1:68668979-68668998 Msa0039140:CDS 35.0%
CATCATAGTGTGGATACAAA+TGG - chr1_1:68669020-68669039 None:intergenic 35.0%
CATTTGTATCCACACTATGA+TGG + chr1_1:68669018-68669037 Msa0039140:CDS 35.0%
!! TGTTAGTGTCTTTAGTCTTG+TGG + chr1_1:68669101-68669120 Msa0039140:intron 35.0%
TTTCCAAACAGTATCACAAG+TGG + chr1_1:68669378-68669397 Msa0039140:intron 35.0%
TAACCACTTGTGATACTGTT+TGG - chr1_1:68669384-68669403 None:intergenic 35.0%
TCAAATAAGCCAATCCAAGT+AGG + chr1_1:68669419-68669438 Msa0039140:intron 35.0%
CATTTACAACCTACTTGGAT+TGG - chr1_1:68669431-68669450 None:intergenic 35.0%
!!! TTGTATCTTTTTGGTTTGGC+GGG + chr1_1:68669515-68669534 Msa0039140:intron 35.0%
! AGTAGGATCCACATACATTT+TGG + chr1_1:68669874-68669893 Msa0039140:intron 35.0%
AATTACATATCCCCAAGCTA+GGG - chr1_1:68670012-68670031 None:intergenic 35.0%
GATTACAAGTTACCTCTGAT+GGG + chr1_1:68670214-68670233 Msa0039140:CDS 35.0%
!!! AATTTTTGGTTTCCCATCAG+AGG - chr1_1:68670229-68670248 None:intergenic 35.0%
GAACCTGTAAACTGGATTAT+TGG + chr1_1:68670663-68670682 Msa0039140:intron 35.0%
TTCCCAATAATCCAGTTTAC+AGG - chr1_1:68670669-68670688 None:intergenic 35.0%
TCTATTGCCTGATTAATACC+AGG + chr1_1:68670866-68670885 Msa0039140:intron 35.0%
ATTCAAAGCACACAAAATCC+TGG - chr1_1:68670887-68670906 None:intergenic 35.0%
! AATTGGTTTAGGTGCTTCTT+TGG + chr1_1:68671081-68671100 Msa0039140:intron 35.0%
! TTGGCATGTGGGTTATAAAT+TGG + chr1_1:68671138-68671157 Msa0039140:CDS 35.0%
!! CATTTTCTAGCAACATCAGA+AGG + chr1_1:68671739-68671758 Msa0039140:intron 35.0%
!! GATAAATGGTTGAAGTACTG+TGG + chr1_1:68671955-68671974 Msa0039140:intron 35.0%
CATCGCATTAGAAGAAGTTA+TGG - chr1_1:68672001-68672020 None:intergenic 35.0%
CTTCTAATGCGATGTGAATA+TGG + chr1_1:68672007-68672026 Msa0039140:intron 35.0%
! TATTTTCTTGCCTTCGTTGT+TGG + chr1_1:68672038-68672057 Msa0039140:intron 35.0%
! GTTTCAACCTATGGTTTTCT+TGG + chr1_1:68672060-68672079 Msa0039140:intron 35.0%
TTTCTTGGAGGCTTCTAAAT+TGG + chr1_1:68672075-68672094 Msa0039140:intron 35.0%
TTCTTGGAGGCTTCTAAATT+GGG + chr1_1:68672076-68672095 Msa0039140:intron 35.0%
GCTTCTAAATTGGGTATAGA+GGG + chr1_1:68672085-68672104 Msa0039140:intron 35.0%
CTTCTAAATTGGGTATAGAG+GGG + chr1_1:68672086-68672105 Msa0039140:intron 35.0%
TACAAGATTGCATTTGACCT+TGG + chr1_1:68672271-68672290 Msa0039140:intron 35.0%
TTAGCACTCATGTCAATAAC+AGG - chr1_1:68672297-68672316 None:intergenic 35.0%
ATACCAAACAACAGCATCTA+TGG - chr1_1:68672593-68672612 None:intergenic 35.0%
TTGAGGATGATTCAGATTGT+GGG + chr1_1:68672653-68672672 Msa0039140:CDS 35.0%
GAAAATGGGGAATCAAAAGT+AGG - chr1_1:68672827-68672846 None:intergenic 35.0%
TGTGATGTGTATGGAAAATG+GGG - chr1_1:68672840-68672859 None:intergenic 35.0%
ACTCATCATTCATTCAGCTT+CGG - chr1_1:68673135-68673154 None:intergenic 35.0%
AATGATGAGTAAGACTTGCA+CGG + chr1_1:68673145-68673164 Msa0039140:intron 35.0%
CATACAACATATTACCTGAG+GGG + chr1_1:68673231-68673250 Msa0039140:intron 35.0%
GTCTCCAAAACGTAAATACT+AGG - chr1_1:68673433-68673452 None:intergenic 35.0%
ATACGACAGCGATCAAATTA+TGG + chr1_1:68673545-68673564 Msa0039140:intron 35.0%
TCAAAACCTATAGAACCAAG+TGG - chr1_1:68673572-68673591 None:intergenic 35.0%
CAGGAGGATTAGAACTAAAA+TGG - chr1_1:68673658-68673677 None:intergenic 35.0%
!!! CATTTTAGTTCTAATCCTCC+TGG + chr1_1:68673656-68673675 Msa0039140:intron 35.0%
AAATTTGAACATCTTCCAGG+AGG - chr1_1:68673674-68673693 None:intergenic 35.0%
GATTTGAATCCTAATTCTCC+AGG + chr1_1:68673699-68673718 Msa0039140:intron 35.0%
GTAGTGAATGTCTATAACGA+TGG + chr1_1:68673770-68673789 Msa0039140:CDS 35.0%
ACAAGAGATTAATTGTGCTC+CGG - chr1_1:68673976-68673995 None:intergenic 35.0%
CTTGTAAAATTGGAGACTCT+CGG + chr1_1:68673991-68674010 Msa0039140:CDS 35.0%
TGCAAGATATTCATGCAATG+AGG - chr1_1:68674095-68674114 None:intergenic 35.0%
CGAAAGATACATCATTCACA+AGG - chr1_1:68674292-68674311 None:intergenic 35.0%
AGCAACTATAGCTTAGAGAA+TGG - chr1_1:68674362-68674381 None:intergenic 35.0%
TCTCTAAGCTATAGTTGCTT+TGG + chr1_1:68674363-68674382 Msa0039140:intron 35.0%
! CTCTAAGCTATAGTTGCTTT+GGG + chr1_1:68674364-68674383 Msa0039140:intron 35.0%
CACTGCTTACAAATATCAGA+CGG - chr1_1:68674418-68674437 None:intergenic 35.0%
TCTTCAAGTATCATAGGTGT+CGG + chr1_1:68674488-68674507 Msa0039140:CDS 35.0%
ATGGTATGTTTGCTTATCTG+TGG + chr1_1:68674586-68674605 Msa0039140:intron 35.0%
CTCGAAATATTCCATGTGTT+TGG + chr1_1:68675189-68675208 Msa0039140:CDS 35.0%
AAAGGCAAAATTTCCAGGAA+AGG - chr1_1:68675261-68675280 None:intergenic 35.0%
ATCGGATTAAGATTGGATTG+TGG + chr1_1:68675571-68675590 Msa0039140:intron 35.0%
TCGGATTAAGATTGGATTGT+GGG + chr1_1:68675572-68675591 Msa0039140:intron 35.0%
AACAACTAACTGATGACTGA+TGG + chr1_1:68675597-68675616 Msa0039140:intron 35.0%
ATTTCTACGGTGACTTCAAA+AGG + chr1_1:68675697-68675716 Msa0039140:intron 35.0%
!! AAATTTTGATGTCTGTGGGT+CGG - chr1_1:68675760-68675779 None:intergenic 35.0%
ATATCACATCTGTGCTTCTT+AGG + chr1_1:68675878-68675897 Msa0039140:intron 35.0%
AATCCCTTTGTACTCTGAAT+TGG + chr1_1:68675993-68676012 Msa0039140:intron 35.0%
TTGGCGTCTTCATGAAATTT+AGG - chr1_1:68676072-68676091 None:intergenic 35.0%
AACCAAATCTTCAAGCTTGT+TGG - chr1_1:68676091-68676110 None:intergenic 35.0%
ATGAGTGAGCAGTAGATATT+CGG - chr1_1:68676169-68676188 None:intergenic 35.0%
TATCTACTGCTCACTCATAA+CGG + chr1_1:68676171-68676190 Msa0039140:CDS 35.0%
CGAATAGAGTAAGATGATGA+AGG - chr1_1:68676222-68676241 None:intergenic 35.0%
AGTTTATAGTGTTTCTCCTC+TGG + chr1_1:68676317-68676336 Msa0039140:intron 35.0%
TAATAAGCTAGTTCAACCAG+AGG - chr1_1:68676336-68676355 None:intergenic 35.0%
CAAGTTCAAGGATAACGAAA+AGG - chr1_1:68677082-68677101 None:intergenic 35.0%
!! GAAAGACAAGTTTTTGAGGA+CGG - chr1_1:68677135-68677154 None:intergenic 35.0%
TTCTACTCTCAGCATATTAG+TGG + chr1_1:68677276-68677295 Msa0039140:intron 35.0%
GATCCTACCAATTTATGTGA+TGG + chr1_1:68677298-68677317 Msa0039140:CDS 35.0%
AGACCATCACATAAATTGGT+AGG - chr1_1:68677304-68677323 None:intergenic 35.0%
ATGCAGACCATCACATAAAT+TGG - chr1_1:68677308-68677327 None:intergenic 35.0%
CTGCATTATTACGAAGTCTA+CGG + chr1_1:68677322-68677341 Msa0039140:CDS 35.0%
! ACAGGCTTGGTTATAGTAAT+TGG - chr1_1:68677391-68677410 None:intergenic 35.0%
AATTACTATAACCAAGCCTG+TGG + chr1_1:68677390-68677409 Msa0039140:intron 35.0%
TCTGAAAATGAAACTTGTGG+AGG - chr1_1:68677430-68677449 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + chr1_1:68677507-68677526 Msa0039140:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr1_1:68677551-68677570 None:intergenic 35.0%
AAATGCTCAAACATCAAGGT+TGG - chr1_1:68677669-68677688 None:intergenic 35.0%
ATCCACAAAAAATCTTCTGG+GGG - chr1_1:68677931-68677950 None:intergenic 35.0%
CATTTCAAAGGTCTTTGCAA+TGG - chr1_1:68678039-68678058 None:intergenic 35.0%
! CATTGCAAAGACCTTTGAAA+TGG + chr1_1:68678037-68678056 Msa0039140:CDS 35.0%
TGCCAAAAACTTCACCTTTA+AGG + chr1_1:68678089-68678108 Msa0039140:CDS 35.0%
!! AACTTCACCTTTAAGGTAGT+AGG + chr1_1:68678096-68678115 Msa0039140:CDS 35.0%
!! AGTTTTGGTCAAGTGGAATA+GGG + chr1_1:68678148-68678167 Msa0039140:CDS 35.0%
AGTCGCATAACCAAATATCT+GGG - chr1_1:68678243-68678262 None:intergenic 35.0%
TTCCTCTCTTTAACAACTTG+TGG + chr1_1:68678267-68678286 Msa0039140:intron 35.0%
TGGTATAAAAGCTAGTCAAG+AGG + chr1_1:68678381-68678400 Msa0039140:CDS 35.0%
CAAGAGGTAATTGTACTTGA+TGG + chr1_1:68678397-68678416 Msa0039140:CDS 35.0%
TAGAATCTACAGGTCGATAT+GGG - chr1_1:68678605-68678624 None:intergenic 35.0%
TTAGAATCTACAGGTCGATA+TGG - chr1_1:68678606-68678625 None:intergenic 35.0%
GAAATCATAACCTTCAGAAC+AGG - chr1_1:68678754-68678773 None:intergenic 35.0%
TACAAGGTCAAATTGGATGA+TGG + chr1_1:68678777-68678796 Msa0039140:CDS 35.0%
TTTAAAGATGAGGATTGGGA+AGG + chr1_1:68678923-68678942 Msa0039140:intron 35.0%
TTAAAGATGAGGATTGGGAA+GGG + chr1_1:68678924-68678943 Msa0039140:intron 35.0%
! CGTTTCAGATACTATTTCTC+AGG + chr1_1:68678959-68678978 Msa0039140:intron 35.0%
!! GAGTTTTGTAGAGTTTGGAT+AGG - chr1_1:68679050-68679069 None:intergenic 35.0%
GTAAACTGTATTCTCCTTTG+GGG - chr1_1:68679072-68679091 None:intergenic 35.0%
TGTAAGGTAAAACTCCTTCT+TGG + chr1_1:68679099-68679118 Msa0039140:intron 35.0%
AAGAAACACAAGGAACAATC+AGG - chr1_1:68679150-68679169 None:intergenic 35.0%
!!! TGTGGTTTTAAGGACTTTGA+AGG + chr1_1:68679247-68679266 Msa0039140:intron 35.0%
!! TTTTAAGGACTTTGAAGGCT+TGG + chr1_1:68679252-68679271 Msa0039140:intron 35.0%
AAAGCCTGCAATAAGAAAGT+TGG + chr1_1:68679284-68679303 Msa0039140:intron 35.0%
AACTCCAACTTTCTTATTGC+AGG - chr1_1:68679291-68679310 None:intergenic 35.0%
! TTTGGAAAAGATGAAGCATC+TGG + chr1_1:68679396-68679415 Msa0039140:CDS 35.0%
ACTGCAAATCTCTGGTTAAT+AGG + chr1_1:68679563-68679582 Msa0039140:intron 35.0%
ATTGCTAGATGAACTCAAGT+AGG + chr1_1:68679664-68679683 Msa0039140:intron 35.0%
TTGCTAGATGAACTCAAGTA+GGG + chr1_1:68679665-68679684 Msa0039140:intron 35.0%
TGAAATGTGTACGTTAATGG+GGG - chr1_1:68679768-68679787 None:intergenic 35.0%
GTGAAATGTGTACGTTAATG+GGG - chr1_1:68679769-68679788 None:intergenic 35.0%
AAGTCCTCAACATTAATTCC+AGG + chr1_1:68679972-68679991 Msa0039140:CDS 35.0%
AGTCCTCAACATTAATTCCA+GGG + chr1_1:68679973-68679992 Msa0039140:CDS 35.0%
! AAACCTTTAAGAGGTAGCTA+GGG - chr1_1:68680018-68680037 None:intergenic 35.0%
! TAAACCTTTAAGAGGTAGCT+AGG - chr1_1:68680019-68680038 None:intergenic 35.0%
CAAATGTCAGCACTATAACA+AGG - chr1_1:68680055-68680074 None:intergenic 35.0%
AACCACTTAGGTATTTCCAT+AGG + chr1_1:68680155-68680174 Msa0039140:intron 35.0%
TTGGTCGGATCAATATCATA+TGG + chr1_1:68680240-68680259 Msa0039140:CDS 35.0%
TTCTGAACGTTTAGAAGAAG+AGG + chr1_1:68680587-68680606 Msa0039140:CDS 35.0%
!!! TCTATCCACATTTTTTGGCA+TGG + chr1_1:68680651-68680670 Msa0039140:intron 35.0%
GTACATGACCAATAACAACA+AGG + chr1_1:68680784-68680803 Msa0039140:intron 35.0%
! AAAAGTACAACAACAGCACA+AGG - chr1_1:68681024-68681043 None:intergenic 35.0%
TCTTGTGTGTGTAAACTGTT+TGG - chr1_1:68681163-68681182 None:intergenic 35.0%
ATTATCTGGTGTCTTTGTAG+AGG + chr1_1:68681182-68681201 Msa0039140:intron 35.0%
TTATCTGGTGTCTTTGTAGA+GGG + chr1_1:68681183-68681202 Msa0039140:intron 35.0%
!! GATGCAAAAATGAAAGTGCT+AGG + chr1_1:68681367-68681386 Msa0039140:CDS 35.0%
!! CAAAAATGAAAGTGCTAGGA+GGG + chr1_1:68681371-68681390 Msa0039140:CDS 35.0%
GTGATGAAGATCTCTTAGAA+TGG + chr1_1:68681407-68681426 Msa0039140:CDS 35.0%
AAGAGTCCTGAAACAAATGA+CGG - chr1_1:68681501-68681520 None:intergenic 35.0%
CTGTTATGTTACCTTGTAGT+CGG + chr1_1:68681630-68681649 Msa0039140:intron 35.0%
TCCAAAATCTTTGCAAGCAA+CGG - chr1_1:68681673-68681692 None:intergenic 35.0%
! TTGCTTGCAAAGATTTTGGA+AGG + chr1_1:68681673-68681692 Msa0039140:CDS 35.0%
ATGTACCTCTTCATGATGAT+GGG - chr1_1:68681731-68681750 None:intergenic 35.0%
TATGTACCTCTTCATGATGA+TGG - chr1_1:68681732-68681751 None:intergenic 35.0%
AGGAAAGAAAACTAGAGACT+GGG - chr1_1:68681792-68681811 None:intergenic 35.0%
TAGGAAAGAAAACTAGAGAC+TGG - chr1_1:68681793-68681812 None:intergenic 35.0%
TTGTAACACGTGAACACAAA+GGG + chr1_1:68681970-68681989 Msa0039140:intron 35.0%
AATTACATAATTGCACGGCT+AGG - chr1_1:68682166-68682185 None:intergenic 35.0%
! TTTTGCACTGAAAAGTGATC+TGG + chr1_1:68682406-68682425 Msa0039140:CDS 35.0%
GTGATACATAAGTAGGTAAC+AGG - chr1_1:68682482-68682501 None:intergenic 35.0%
GACTACAGTGATACATAAGT+AGG - chr1_1:68682489-68682508 None:intergenic 35.0%
CCTAATCCATATAGTTGACA+CGG + chr1_1:68682703-68682722 Msa0039140:intron 35.0%
AACAGTGCAAGTAGTAAATG+TGG - chr1_1:68682953-68682972 None:intergenic 35.0%
GAAAAAGATAGAATCAACCC+GGG + chr1_1:68683034-68683053 Msa0039140:CDS 35.0%
AGCAGAAATCGAGTCTTTAA+AGG + chr1_1:68683097-68683116 Msa0039140:CDS 35.0%
! GAAATCGAGTCTTTAAAGGT+TGG + chr1_1:68683101-68683120 Msa0039140:intron 35.0%
GTAGCACTTCTTTATGTCAA+TGG - chr1_1:68683251-68683270 None:intergenic 35.0%
! GAATTTTACATAGCACAAGC+AGG - chr1_1:68683334-68683353 None:intergenic 35.0%
!! CTTGACTTGTACATTGTCAA+AGG + chr1_1:68683460-68683479 Msa0039140:intron 35.0%
GACGTTAAGTGCACAAAATA+TGG + chr1_1:68683605-68683624 Msa0039140:CDS 35.0%
TAAAGCTCTATAAGAGACAG+TGG + chr1_1:68683923-68683942 Msa0039140:CDS 35.0%
AGATGGAAAACCCTAGAAAA+GGG - chr1_1:68683977-68683996 None:intergenic 35.0%
CCATACAAAACATGATTGGA+TGG - chr1_1:68684072-68684091 None:intergenic 35.0%
! CCATCCAATCATGTTTTGTA+TGG + chr1_1:68684069-68684088 Msa0039140:three_prime_UTR 35.0%
TTATTACAATGTCCAAGGGA+TGG - chr1_1:68684131-68684150 None:intergenic 35.0%
! ATAGGTGGATTTAACTCGAG+TGG - chr1_1:68668562-68668581 None:intergenic 40.0%
GAAGAAGAAGAAGAAGAAGC+GGG - chr1_1:68668595-68668614 None:intergenic 40.0%
CGGTGAAGATTGATCAGAAA+TGG - chr1_1:68668757-68668776 None:intergenic 40.0%
!! AGAAGTTTGGGTTTGTTGTG+CGG - chr1_1:68668777-68668796 None:intergenic 40.0%
ACTGATTGAGCTTGAAGTTG+CGG - chr1_1:68668942-68668961 None:intergenic 40.0%
GCTCAATCAGTCTACTTTCT+TGG + chr1_1:68668951-68668970 Msa0039140:CDS 40.0%
GGCTTCTCTTATGCCTAAAA+CGG + chr1_1:68668972-68668991 Msa0039140:CDS 40.0%
CATAGTGTGGATACAAATGG+AGG - chr1_1:68669017-68669036 None:intergenic 40.0%
!! GGTGTTCTCATCGCTATTTT+TGG + chr1_1:68669045-68669064 Msa0039140:CDS 40.0%
!! AGTGTCTTTAGTCTTGTGGA+TGG + chr1_1:68669105-68669124 Msa0039140:intron 40.0%
!!! TGTATCTTTTTGGTTTGGCG+GGG + chr1_1:68669516-68669535 Msa0039140:intron 40.0%
GAGTCTGAATTCATTTGGGT+TGG + chr1_1:68669538-68669557 Msa0039140:intron 40.0%
GAATTACATATCCCCAAGCT+AGG - chr1_1:68670013-68670032 None:intergenic 40.0%
GGATTACAAGTTACCTCTGA+TGG + chr1_1:68670213-68670232 Msa0039140:CDS 40.0%
GATGCTGATGGTTGTATTTC+TGG + chr1_1:68670401-68670420 Msa0039140:CDS 40.0%
CAGTGATAGGGAATCAATTG+TGG + chr1_1:68670434-68670453 Msa0039140:intron 40.0%
ATAGGGAATCAATTGTGGTC+AGG + chr1_1:68670439-68670458 Msa0039140:intron 40.0%
ATCTATCTGATATGGGACGT+GGG - chr1_1:68670695-68670714 None:intergenic 40.0%
TATCTATCTGATATGGGACG+TGG - chr1_1:68670696-68670715 None:intergenic 40.0%
CATACTCATCCTTACCAAAC+CGG - chr1_1:68670768-68670787 None:intergenic 40.0%
GGTAAGGATGAGTATGAGTT+AGG + chr1_1:68670772-68670791 Msa0039140:intron 40.0%
GTTAGGCCTCAATTTCAACA+TGG + chr1_1:68670789-68670808 Msa0039140:intron 40.0%
CGTGATTTCTTACATCAGTC+AGG - chr1_1:68670925-68670944 None:intergenic 40.0%
ATCATCAGAACGGTTGAAGT+GGG - chr1_1:68670954-68670973 None:intergenic 40.0%
AATCATCAGAACGGTTGAAG+TGG - chr1_1:68670955-68670974 None:intergenic 40.0%
TTCTTCCCAGTGAAAGAATG+TGG + chr1_1:68671031-68671050 Msa0039140:intron 40.0%
TCTTCCCAGTGAAAGAATGT+GGG + chr1_1:68671032-68671051 Msa0039140:intron 40.0%
TACTCCCACATTCTTTCACT+GGG - chr1_1:68671039-68671058 None:intergenic 40.0%
TTACTCCCACATTCTTTCAC+TGG - chr1_1:68671040-68671059 None:intergenic 40.0%
CTTTGGCTATCAACACTTCA+TGG + chr1_1:68671098-68671117 Msa0039140:CDS 40.0%
ACTTCATGGAAAAACCCTTC+TGG + chr1_1:68671112-68671131 Msa0039140:CDS 40.0%
AACATTGACCTCTCGTTTGA+AGG + chr1_1:68671180-68671199 Msa0039140:CDS 40.0%
AAAGTGGGATGAGAAAAACC+AGG + chr1_1:68671316-68671335 Msa0039140:CDS 40.0%
! TTTCTAGCAACATCAGAAGG+TGG + chr1_1:68671742-68671761 Msa0039140:intron 40.0%
GGAGGATGCTAAACTCAAAA+AGG + chr1_1:68671763-68671782 Msa0039140:CDS 40.0%
!! TCTTCTTAGAAAGCATTCCG+AGG + chr1_1:68671814-68671833 Msa0039140:CDS 40.0%
! TAGGTTGAAACCAACAACGA+AGG - chr1_1:68672051-68672070 None:intergenic 40.0%
!! TCGTTGTTGGTTTCAACCTA+TGG + chr1_1:68672051-68672070 Msa0039140:intron 40.0%
! TCAACCTATGGTTTTCTTGG+AGG + chr1_1:68672063-68672082 Msa0039140:intron 40.0%
GGCTTCTAAATTGGGTATAG+AGG + chr1_1:68672084-68672103 Msa0039140:intron 40.0%
AAATTGGGTATAGAGGGGAT+AGG + chr1_1:68672091-68672110 Msa0039140:intron 40.0%
AATTGGGTATAGAGGGGATA+GGG + chr1_1:68672092-68672111 Msa0039140:intron 40.0%
CAATTGACTAAACACTGAGC+AGG - chr1_1:68672506-68672525 None:intergenic 40.0%
! GATGCTGTTGTTTGGTATGA+TGG + chr1_1:68672595-68672614 Msa0039140:CDS 40.0%
! TGTTGTTTGGTATGATGGAG+AGG + chr1_1:68672600-68672619 Msa0039140:CDS 40.0%
! TTTGGTATGATGGAGAGGTT+TGG + chr1_1:68672605-68672624 Msa0039140:CDS 40.0%
CTTGAGGATGATTCAGATTG+TGG + chr1_1:68672652-68672671 Msa0039140:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr1_1:68673276-68673295 Msa0039140:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr1_1:68673319-68673338 Msa0039140:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr1_1:68673320-68673339 Msa0039140:intron 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr1_1:68673327-68673346 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr1_1:68673325-68673344 Msa0039140:intron 40.0%
GTATGTAAAAAAGGGCAACC+CGG - chr1_1:68673401-68673420 None:intergenic 40.0%
GTCACAAAGCTTAAGCTGTT+AGG + chr1_1:68673457-68673476 Msa0039140:intron 40.0%
CGATCAAATTATGGACCACT+TGG + chr1_1:68673554-68673573 Msa0039140:intron 40.0%
!! TATGGACCACTTGGTTCTAT+AGG + chr1_1:68673563-68673582 Msa0039140:intron 40.0%
! GGTACGGCTAGTTCATAATA+TGG - chr1_1:68673597-68673616 None:intergenic 40.0%
AGTAGCAATACCAGCAACAT+GGG - chr1_1:68673837-68673856 None:intergenic 40.0%
AAAATCATGTCCGTACCTCT+GGG - chr1_1:68673868-68673887 None:intergenic 40.0%
TAAAATCATGTCCGTACCTC+TGG - chr1_1:68673869-68673888 None:intergenic 40.0%
CAAGAGATTAATTGTGCTCC+GGG - chr1_1:68673975-68673994 None:intergenic 40.0%
AAAATTGGAGACTCTCGGTT+AGG + chr1_1:68673996-68674015 Msa0039140:CDS 40.0%
!! AAACTGGAACTGGTTTGACT+CGG + chr1_1:68674027-68674046 Msa0039140:CDS 40.0%
CTGATATTTGTAAGCAGTGC+TGG + chr1_1:68674419-68674438 Msa0039140:CDS 40.0%
!! TAAGCAGTGCTGGTAATAGT+GGG + chr1_1:68674429-68674448 Msa0039140:CDS 40.0%
GGTACGTCTTCAAGTATCAT+AGG + chr1_1:68674482-68674501 Msa0039140:CDS 40.0%
TTATGTTTCTCCTGCTATGG+CGG + chr1_1:68674514-68674533 Msa0039140:CDS 40.0%
TTCCAACATGGACTCTTCAA+CGG + chr1_1:68674752-68674771 Msa0039140:CDS 40.0%
ATTGCTCATAAGCGCTATGA+AGG + chr1_1:68674831-68674850 Msa0039140:CDS 40.0%
GAGAACACTTCTGTTCCAAT+TGG + chr1_1:68674994-68675013 Msa0039140:CDS 40.0%
CAGAGGATAAATTATCCGCT+GGG + chr1_1:68675025-68675044 Msa0039140:CDS 40.0%
ATAAATTATCCGCTGGGCAA+GGG + chr1_1:68675031-68675050 Msa0039140:CDS 40.0%
AGTAAGTTCACATCCTTTCC+TGG + chr1_1:68675245-68675264 Msa0039140:intron 40.0%
TCATTCGAGAAACAAAAGGC+AGG + chr1_1:68675282-68675301 Msa0039140:intron 40.0%
TGATGACAGATCCATCATCA+CGG + chr1_1:68675423-68675442 Msa0039140:intron 40.0%
ATCTCACCTCAGTAGATTGT+TGG - chr1_1:68675478-68675497 None:intergenic 40.0%
TAGCTCAAACTATGCTCTGA+TGG - chr1_1:68675526-68675545 None:intergenic 40.0%
CGGATTAAGATTGGATTGTG+GGG + chr1_1:68675573-68675592 Msa0039140:intron 40.0%
TTGAATCTAACTCTCGTGCT+TGG + chr1_1:68675620-68675639 Msa0039140:intron 40.0%
TGAATCTAACTCTCGTGCTT+GGG + chr1_1:68675621-68675640 Msa0039140:intron 40.0%
TGAGTGAGCAGTAGATATTC+GGG - chr1_1:68676168-68676187 None:intergenic 40.0%
!! TAGGCGGGTGACTTTTAAAA+TGG + chr1_1:68676726-68676745 Msa0039140:intron 40.0%
! CGAGTTTCTAGACTACAGAT+GGG - chr1_1:68676999-68677018 None:intergenic 40.0%
! TCGAGTTTCTAGACTACAGA+TGG - chr1_1:68677000-68677019 None:intergenic 40.0%
TTGATTGACTAATGCACACC+TGG - chr1_1:68677466-68677485 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr1_1:68677549-68677568 Msa0039140:intron 40.0%
TTTCTTCTGGTAGCACACTA+AGG + chr1_1:68677590-68677609 Msa0039140:intron 40.0%
!!! TACCCCCAGAAGATTTTTTG+TGG + chr1_1:68677926-68677945 Msa0039140:CDS 40.0%
GTCTTTGCAATGGACATATC+TGG - chr1_1:68678029-68678048 None:intergenic 40.0%
!! TGCAAAGACCTTTGAAATGG+CGG + chr1_1:68678040-68678059 Msa0039140:CDS 40.0%
ATAACACTCCGCCATTTCAA+AGG - chr1_1:68678051-68678070 None:intergenic 40.0%
!! TTCACCTTTAAGGTAGTAGG+TGG + chr1_1:68678099-68678118 Msa0039140:CDS 40.0%
! AGCTAGTCATAGCTCAGTTT+TGG + chr1_1:68678133-68678152 Msa0039140:CDS 40.0%
!! ATAGCTCAGTTTTGGTCAAG+TGG + chr1_1:68678141-68678160 Msa0039140:CDS 40.0%
!! CAGTTTTGGTCAAGTGGAAT+AGG + chr1_1:68678147-68678166 Msa0039140:CDS 40.0%
GACTACGAATGTGGATCTTA+AGG + chr1_1:68678179-68678198 Msa0039140:CDS 40.0%
CATAACCAAATATCTGGGAG+GGG - chr1_1:68678238-68678257 None:intergenic 40.0%
GCATAACCAAATATCTGGGA+GGG - chr1_1:68678239-68678258 None:intergenic 40.0%
GAGTCGCATAACCAAATATC+TGG - chr1_1:68678244-68678263 None:intergenic 40.0%
CACCACAAGTTGTTAAAGAG+AGG - chr1_1:68678272-68678291 None:intergenic 40.0%
TGCTACAGGTGTAAGTTTCT+CGG - chr1_1:68678467-68678486 None:intergenic 40.0%
!! TTGGGGAGTTTTGTAGAGTT+TGG - chr1_1:68679055-68679074 None:intergenic 40.0%
AACTCTACAAAACTCCCCAA+AGG + chr1_1:68679055-68679074 Msa0039140:CDS 40.0%
! GCATGAAGACTTGCAGATTT+TGG + chr1_1:68679378-68679397 Msa0039140:CDS 40.0%
ACCAGAGATTTGCAGTTTGA+GGG - chr1_1:68679559-68679578 None:intergenic 40.0%
AACCAGAGATTTGCAGTTTG+AGG - chr1_1:68679560-68679579 None:intergenic 40.0%
!! AGCTTTTTCTCTAAGCCAGA+TGG + chr1_1:68679924-68679943 Msa0039140:CDS 40.0%
AGGAACCATTTCCCATCAAT+GGG - chr1_1:68679950-68679969 None:intergenic 40.0%
AAGGAACCATTTCCCATCAA+TGG - chr1_1:68679951-68679970 None:intergenic 40.0%
GTACCCTGGAATTAATGTTG+AGG - chr1_1:68679979-68679998 None:intergenic 40.0%
GTCCTATGGAAATACCTAAG+TGG - chr1_1:68680160-68680179 None:intergenic 40.0%
AAAACTATCATTTGCCGGAC+AGG + chr1_1:68680263-68680282 Msa0039140:CDS 40.0%
AAACTATCATTTGCCGGACA+GGG + chr1_1:68680264-68680283 Msa0039140:CDS 40.0%
AGCATACAAGATCTTCAAGC+GGG - chr1_1:68680386-68680405 None:intergenic 40.0%
GAGCATACAAGATCTTCAAG+CGG - chr1_1:68680387-68680406 None:intergenic 40.0%
GTGTGTGAGATTGTGGAAAT+TGG - chr1_1:68680409-68680428 None:intergenic 40.0%
CTCGTCAATCTTCAAACACA+AGG - chr1_1:68680529-68680548 None:intergenic 40.0%
CTTGTGTTTGAAGATTGACG+AGG + chr1_1:68680527-68680546 Msa0039140:intron 40.0%
ACGTTCAGAAACAGTCTTCT+TGG - chr1_1:68680577-68680596 None:intergenic 40.0%
TTCAGCCATGCCAAAAAATG+TGG - chr1_1:68680659-68680678 None:intergenic 40.0%
!! TGTGCAGTCCTTGTTGTTAT+TGG - chr1_1:68680795-68680814 None:intergenic 40.0%
ATAACAACAAGGACTGCACA+TGG + chr1_1:68680795-68680814 Msa0039140:intron 40.0%
!! GCAAAAATGAAAGTGCTAGG+AGG + chr1_1:68681370-68681389 Msa0039140:CDS 40.0%
GTGAGTCAACCACTTAAACT+AGG - chr1_1:68681479-68681498 None:intergenic 40.0%
CTTTGGATATTCCGACTACA+AGG - chr1_1:68681644-68681663 None:intergenic 40.0%
! TCCGTTGCTTGCAAAGATTT+TGG + chr1_1:68681669-68681688 Msa0039140:CDS 40.0%
!! TGCAAAGATTTTGGAAGGCT+TGG + chr1_1:68681678-68681697 Msa0039140:CDS 40.0%
!! TTTTGGAAGGCTTGGTTTCT+AGG + chr1_1:68681686-68681705 Msa0039140:CDS 40.0%
CAAATCCCATCATCATGAAG+AGG + chr1_1:68681723-68681742 Msa0039140:CDS 40.0%
! TCATGAAGAGGTACATACCA+CGG + chr1_1:68681735-68681754 Msa0039140:intron 40.0%
AGAAAACTAGAGACTGGGAA+AGG - chr1_1:68681787-68681806 None:intergenic 40.0%
CTTGTAACACGTGAACACAA+AGG + chr1_1:68681969-68681988 Msa0039140:intron 40.0%
!! CAGTATTGATAGAGAAGAGC+TGG + chr1_1:68682376-68682395 Msa0039140:CDS 40.0%
GAAAAGTGATCTGGATGATG+AGG + chr1_1:68682415-68682434 Msa0039140:CDS 40.0%
TCCATGCAGTGAAATCTCAA+TGG + chr1_1:68682577-68682596 Msa0039140:intron 40.0%
ACCATTGAGATTTCACTGCA+TGG - chr1_1:68682581-68682600 None:intergenic 40.0%
CCGTGTCAACTATATGGATT+AGG - chr1_1:68682706-68682725 None:intergenic 40.0%
CAATTGCCGTGTCAACTATA+TGG - chr1_1:68682712-68682731 None:intergenic 40.0%
TTATGGAACCTCATTCTGCA+TGG + chr1_1:68682910-68682929 Msa0039140:intron 40.0%
! AATGGTTTGAGTTCAAGCGA+GGG - chr1_1:68683233-68683252 None:intergenic 40.0%
GACTTGTACATTGTCAAAGG+AGG + chr1_1:68683463-68683482 Msa0039140:intron 40.0%
CACAAAATATGGGATCCTGT+TGG + chr1_1:68683616-68683635 Msa0039140:CDS 40.0%
! AGAAGCGTAGTCAAAGGATT+GGG + chr1_1:68683648-68683667 Msa0039140:CDS 40.0%
CCAGTTGAAAAACAAGGTTC+TGG - chr1_1:68683839-68683858 None:intergenic 40.0%
!!! CCAGAACCTTGTTTTTCAAC+TGG + chr1_1:68683836-68683855 Msa0039140:intron 40.0%
CTGCATCCAGTTGAAAAACA+AGG - chr1_1:68683845-68683864 None:intergenic 40.0%
!! CTTGTTTTTCAACTGGATGC+AGG + chr1_1:68683843-68683862 Msa0039140:intron 40.0%
GATGGAAAACCCTAGAAAAG+GGG - chr1_1:68683976-68683995 None:intergenic 40.0%
CAGATGGAAAACCCTAGAAA+AGG - chr1_1:68683978-68683997 None:intergenic 40.0%
AAAGCTTATGCTGATGCAAC+TGG - chr1_1:68684033-68684052 None:intergenic 40.0%
AATGTCCAAGGGATGGTAAA+TGG - chr1_1:68684124-68684143 None:intergenic 40.0%
AAGAAGAAGCGGGATGGAAT+TGG - chr1_1:68668585-68668604 None:intergenic 45.0%
AAGAAGAAGAAGAAGCGGGA+TGG - chr1_1:68668591-68668610 None:intergenic 45.0%
!! GGTGTTATTGTTCCCGTCTT+TGG - chr1_1:68668902-68668921 None:intergenic 45.0%
! TCGACGCCAATTTCCGTTTT+AGG - chr1_1:68668988-68669007 None:intergenic 45.0%
!! TATCCACACTATGATGGACG+CGG + chr1_1:68669024-68669043 Msa0039140:CDS 45.0%
! GCATGTAGTCAGCTGGTTTA+AGG + chr1_1:68669129-68669148 Msa0039140:intron 45.0%
CGGGGAGTCTGAATTCATTT+GGG + chr1_1:68669534-68669553 Msa0039140:intron 45.0%
TGTGGAACCTGCTTTCAAAG+AGG - chr1_1:68669848-68669867 None:intergenic 45.0%
! CTTTGAAAGCAGGTTCCACA+TGG + chr1_1:68669848-68669867 Msa0039140:intron 45.0%
CAGGTTCCACATGGTTTAGT+AGG + chr1_1:68669857-68669876 Msa0039140:intron 45.0%
GTGGATCCTACTAAACCATG+TGG - chr1_1:68669866-68669885 None:intergenic 45.0%
! TTAATCTTCAGCACTGGGAG+TGG + chr1_1:68670347-68670366 Msa0039140:intron 45.0%
!! GGTTGTATTTCTGGTGCATC+AGG + chr1_1:68670410-68670429 Msa0039140:CDS 45.0%
GACAAGTTGCAACAGCCAAA+TGG - chr1_1:68670486-68670505 None:intergenic 45.0%
GGAAAAACCCTTCTGGTGAT+TGG + chr1_1:68671119-68671138 Msa0039140:CDS 45.0%
TTGACCTCTCGTTTGAAGGT+AGG + chr1_1:68671184-68671203 Msa0039140:intron 45.0%
TGACCTCTCGTTTGAAGGTA+GGG + chr1_1:68671185-68671204 Msa0039140:intron 45.0%
TATCCCTACCTTCAAACGAG+AGG - chr1_1:68671191-68671210 None:intergenic 45.0%
CAGTCTTAGCAATTTCCTCC+TGG - chr1_1:68671337-68671356 None:intergenic 45.0%
GCACAACCGTCATCAAAGAA+GGG - chr1_1:68671577-68671596 None:intergenic 45.0%
GAAGCCTCCAAGAAAACCAT+AGG - chr1_1:68672070-68672089 None:intergenic 45.0%
ATTGGGTATAGAGGGGATAG+GGG + chr1_1:68672093-68672112 Msa0039140:intron 45.0%
! TCTGTTTTGTGTGCTGCACA+AGG + chr1_1:68672138-68672157 Msa0039140:intron 45.0%
CTCATGTCAATAACAGGCCA+AGG - chr1_1:68672291-68672310 None:intergenic 45.0%
AAACACTGAGCAGGATCAGA+AGG - chr1_1:68672497-68672516 None:intergenic 45.0%
CAAACAACAGCATCTATGGC+AGG - chr1_1:68672589-68672608 None:intergenic 45.0%
CTGCCATAGATGCTGTTGTT+TGG + chr1_1:68672587-68672606 Msa0039140:CDS 45.0%
! GTATGATGGAGAGGTTTGGA+GGG + chr1_1:68672609-68672628 Msa0039140:CDS 45.0%
AGGATGATTCAGATTGTGGG+AGG + chr1_1:68672656-68672675 Msa0039140:CDS 45.0%
TATTACCTGAGGGGTAACCT+TGG + chr1_1:68673240-68673259 Msa0039140:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr1_1:68673282-68673301 Msa0039140:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr1_1:68673283-68673302 Msa0039140:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr1_1:68673316-68673335 None:intergenic 45.0%
CCAAACTTACCCTGCATATG+CGG + chr1_1:68673362-68673381 Msa0039140:intron 45.0%
CAAACTTACCCTGCATATGC+GGG + chr1_1:68673363-68673382 Msa0039140:intron 45.0%
TCCAAAGGACTCTTCAGTGA+GGG - chr1_1:68673526-68673545 None:intergenic 45.0%
ATCCAAAGGACTCTTCAGTG+AGG - chr1_1:68673527-68673546 None:intergenic 45.0%
TTGATCGCTGTCGTATCCAA+AGG - chr1_1:68673541-68673560 None:intergenic 45.0%
CAGTAGCAATACCAGCAACA+TGG - chr1_1:68673838-68673857 None:intergenic 45.0%
TGTCAGGAGCCTTTGTTGAA+TGG + chr1_1:68673942-68673961 Msa0039140:intron 45.0%
GGTGCAACTCCATTCAACAA+AGG - chr1_1:68673954-68673973 None:intergenic 45.0%
TTGTTGAATGGAGTTGCACC+CGG + chr1_1:68673954-68673973 Msa0039140:CDS 45.0%
AGACTCTCGGTTAGGTTCAA+TGG + chr1_1:68674004-68674023 Msa0039140:CDS 45.0%
CGGTTAGGTTCAATGGAAAC+TGG + chr1_1:68674011-68674030 Msa0039140:CDS 45.0%
GGTTCAATGGAAACTGGAAC+TGG + chr1_1:68674017-68674036 Msa0039140:CDS 45.0%
!! AACTGGAACTGGTTTGACTC+GGG + chr1_1:68674028-68674047 Msa0039140:CDS 45.0%
CCATAGTCTGGCAACAATGT+TGG - chr1_1:68674257-68674276 None:intergenic 45.0%
CCAACATTGTTGCCAGACTA+TGG + chr1_1:68674254-68674273 Msa0039140:CDS 45.0%
! TCAACAAAGCGTCCATAGTC+TGG - chr1_1:68674269-68674288 None:intergenic 45.0%
!! GTAAGCAGTGCTGGTAATAG+TGG + chr1_1:68674428-68674447 Msa0039140:CDS 45.0%
ATACTTGAAGACGTACCACC+AGG - chr1_1:68674479-68674498 None:intergenic 45.0%
CGCTTATGTTTCTCCTGCTA+TGG + chr1_1:68674511-68674530 Msa0039140:CDS 45.0%
CTATTGCTCCTGTTCCAACA+TGG + chr1_1:68674740-68674759 Msa0039140:CDS 45.0%
TGAAGAGTCCATGTTGGAAC+AGG - chr1_1:68674751-68674770 None:intergenic 45.0%
GCGTGCAGATTATACACATC+AGG - chr1_1:68674927-68674946 None:intergenic 45.0%
GATGTGTATAATCTGCACGC+AGG + chr1_1:68674927-68674946 Msa0039140:intron 45.0%
TATAATCTGCACGCAGGAAG+AGG + chr1_1:68674933-68674952 Msa0039140:intron 45.0%
ATAATCTGCACGCAGGAAGA+GGG + chr1_1:68674934-68674953 Msa0039140:intron 45.0%
! CTCACGCTATATGGACTAAC+GGG - chr1_1:68674964-68674983 None:intergenic 45.0%
! CCTCACGCTATATGGACTAA+CGG - chr1_1:68674965-68674984 None:intergenic 45.0%
TAGTCCATATAGCGTGAGGA+AGG + chr1_1:68674966-68674985 Msa0039140:CDS 45.0%
!! TGGAACAGAAGTGTTCTCCA+GGG - chr1_1:68674992-68675011 None:intergenic 45.0%
!! TTGGAACAGAAGTGTTCTCC+AGG - chr1_1:68674993-68675012 None:intergenic 45.0%
! TCCAATTGGTGATTCACCAG+AGG + chr1_1:68675008-68675027 Msa0039140:CDS 45.0%
TCCTCTGGTGAATCACCAAT+TGG - chr1_1:68675012-68675031 None:intergenic 45.0%
CCAGCGGATAATTTATCCTC+TGG - chr1_1:68675027-68675046 None:intergenic 45.0%
CCAGAGGATAAATTATCCGC+TGG + chr1_1:68675024-68675043 Msa0039140:CDS 45.0%
GATAAATTATCCGCTGGGCA+AGG + chr1_1:68675030-68675049 Msa0039140:CDS 45.0%
GATGACAGATCCATCATCAC+GGG + chr1_1:68675424-68675443 Msa0039140:intron 45.0%
ATGACAGATCCATCATCACG+GGG + chr1_1:68675425-68675444 Msa0039140:intron 45.0%
TGCTTGCCAACAATCTACTG+AGG + chr1_1:68675469-68675488 Msa0039140:CDS 45.0%
GGTGAGATCATTCTCAACGT+TGG + chr1_1:68675490-68675509 Msa0039140:intron 45.0%
CGCCAACAAGCTTGAAGATT+TGG + chr1_1:68676086-68676105 Msa0039140:CDS 45.0%
!! GTATTGACTGCAAAGCACCA+TGG + chr1_1:68677344-68677363 Msa0039140:intron 45.0%
TTGTGGAGGTCTGTTGATCA+CGG - chr1_1:68677416-68677435 None:intergenic 45.0%
TCAGAGATGTTATTCGAGCC+AGG + chr1_1:68677445-68677464 Msa0039140:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr1_1:68677542-68677561 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr1_1:68677539-68677558 Msa0039140:intron 45.0%
AGCACACTAAGGCTGGAATT+TGG + chr1_1:68677601-68677620 Msa0039140:intron 45.0%
!!! AGGTGAAGTTTTTGGCAGCA+GGG - chr1_1:68678086-68678105 None:intergenic 45.0%
!!! AAGGTGAAGTTTTTGGCAGC+AGG - chr1_1:68678087-68678106 None:intergenic 45.0%
CTGACCACCTACTACCTTAA+AGG - chr1_1:68678106-68678125 None:intergenic 45.0%
GAGTCATGAGACTACGAATG+TGG + chr1_1:68678170-68678189 Msa0039140:CDS 45.0%
ATTCTCCCCTCCCAGATATT+TGG + chr1_1:68678230-68678249 Msa0039140:intron 45.0%
CGCATAACCAAATATCTGGG+AGG - chr1_1:68678240-68678259 None:intergenic 45.0%
!! AGTTGATGCAGAAGCACTAC+TGG + chr1_1:68678438-68678457 Msa0039140:CDS 45.0%
! GCGCTGATCTTAGAATCTAC+AGG - chr1_1:68678615-68678634 None:intergenic 45.0%
CTTTAGATGGCCTGTTCTGA+AGG + chr1_1:68678741-68678760 Msa0039140:intron 45.0%
AAGGAACAATCAGGCATGTG+TGG - chr1_1:68679141-68679160 None:intergenic 45.0%
TCCCTCAAACTGCAAATCTC+TGG + chr1_1:68679555-68679574 Msa0039140:intron 45.0%
TTAATTCCAGGGTACGTTGC+TGG + chr1_1:68679984-68680003 Msa0039140:intron 45.0%
TAATTCCAGGGTACGTTGCT+GGG + chr1_1:68679985-68680004 Msa0039140:intron 45.0%
AGTCCCTAGCTACCTCTTAA+AGG + chr1_1:68680012-68680031 Msa0039140:intron 45.0%
! TTGGGAAGCTTGTCTTTTGG+TGG - chr1_1:68680117-68680136 None:intergenic 45.0%
ACCAAAAGACAAGCTTCCCA+AGG + chr1_1:68680116-68680135 Msa0039140:CDS 45.0%
! ACCTTGGGAAGCTTGTCTTT+TGG - chr1_1:68680120-68680139 None:intergenic 45.0%
TTTCCACAGAACTCTCTGCA+AGG + chr1_1:68680210-68680229 Msa0039140:intron 45.0%
CTCTCTGCAAGGATCTGTAT+TGG + chr1_1:68680221-68680240 Msa0039140:CDS 45.0%
! CTGCAAGGATCTGTATTGGT+CGG + chr1_1:68680225-68680244 Msa0039140:CDS 45.0%
AACTATCATTTGCCGGACAG+GGG + chr1_1:68680265-68680284 Msa0039140:CDS 45.0%
TTCAAGCGGGTAAGTGCATA+AGG - chr1_1:68680373-68680392 None:intergenic 45.0%
!! TTAGCCTTGGCTTGTCTACT+AGG + chr1_1:68681339-68681358 Msa0039140:intron 45.0%
CAAGTTGTCTGTCTTGCTCA+AGG + chr1_1:68681432-68681451 Msa0039140:CDS 45.0%
GACTCACCGTCATTTGTTTC+AGG + chr1_1:68681492-68681511 Msa0039140:intron 45.0%
AAACTAGAGACTGGGAAAGG+AGG - chr1_1:68681784-68681803 None:intergenic 45.0%
TAACACGTGAACACAAAGGG+TGG + chr1_1:68681973-68681992 Msa0039140:intron 45.0%
AACACGTGAACACAAAGGGT+GGG + chr1_1:68681974-68681993 Msa0039140:intron 45.0%
AATTGCACGGCTAGGAAGAT+AGG - chr1_1:68682158-68682177 None:intergenic 45.0%
!! TATCCCTGTACTGACTACTG+CGG + chr1_1:68683197-68683216 Msa0039140:intron 45.0%
! ATGGTTTGAGTTCAAGCGAG+GGG - chr1_1:68683232-68683251 None:intergenic 45.0%
! CAATGGTTTGAGTTCAAGCG+AGG - chr1_1:68683234-68683253 None:intergenic 45.0%
CTACTCTTCTTTCGAGAGCT+TGG + chr1_1:68683267-68683286 Msa0039140:intron 45.0%
AAAGGAGGTAGATAACTCCC+CGG + chr1_1:68683478-68683497 Msa0039140:intron 45.0%
AAATCCCGTCGAGCAATCAA+AGG + chr1_1:68683523-68683542 Msa0039140:CDS 45.0%
TCATCCTTTGATTGCTCGAC+GGG - chr1_1:68683530-68683549 None:intergenic 45.0%
GTCATCCTTTGATTGCTCGA+CGG - chr1_1:68683531-68683550 None:intergenic 45.0%
GTCGAGCAATCAAAGGATGA+CGG + chr1_1:68683530-68683549 Msa0039140:CDS 45.0%
! GAGAAGCGTAGTCAAAGGAT+TGG + chr1_1:68683647-68683666 Msa0039140:CDS 45.0%
! AAGGATTGGGACAGCATTGA+AGG + chr1_1:68683661-68683680 Msa0039140:CDS 45.0%
TAGAAAAGGGGTAAGCTAGG+GGG - chr1_1:68683964-68683983 None:intergenic 45.0%
CTAGAAAAGGGGTAAGCTAG+GGG - chr1_1:68683965-68683984 None:intergenic 45.0%
CCTAGAAAAGGGGTAAGCTA+GGG - chr1_1:68683966-68683985 None:intergenic 45.0%
! CCTAGCTTACCCCTTTTCTA+GGG + chr1_1:68683964-68683983 Msa0039140:CDS 45.0%
! GGGTTTTCCATCTGTGAAAC+AGG + chr1_1:68683984-68684003 Msa0039140:exon 45.0%
ACAGCAACCTGTTTCACAGA+TGG - chr1_1:68683994-68684013 None:intergenic 45.0%
ATCTGTGAAACAGGTTGCTG+TGG + chr1_1:68683993-68684012 Msa0039140:three_prime_UTR 45.0%
TGAAACAGGTTGCTGTGGAA+TGG + chr1_1:68683998-68684017 Msa0039140:three_prime_UTR 45.0%
TTATGCTGATGCAACTGGCA+AGG - chr1_1:68684028-68684047 None:intergenic 45.0%
! GATTGCCATTTACCATCCCT+TGG + chr1_1:68684116-68684135 Msa0039140:three_prime_UTR 45.0%
!! AATGATAAATATTTAAAAAA+TGG + chr1_1:68672384-68672403 Msa0039140:intron 5.0%
!!! TGATTTTTTATTTATTTAAA+AGG + chr1_1:68672524-68672543 Msa0039140:intron 5.0%
!!! TAATTTAAAATAAAATATGT+AGG - chr1_1:68676517-68676536 None:intergenic 5.0%
!! TAATTAAATAAATATATAGA+AGG - chr1_1:68679861-68679880 None:intergenic 5.0%
GAAGCGGGATGGAATTGGAT+AGG - chr1_1:68668580-68668599 None:intergenic 50.0%
!! AGCGGGTTGAGAAGAAGTGA+AGG - chr1_1:68668866-68668885 None:intergenic 50.0%
TTCACTTCTTCTCAACCCGC+TGG + chr1_1:68668865-68668884 Msa0039140:CDS 50.0%
TTTGGCGTTGTCATCACCAG+CGG - chr1_1:68668884-68668903 None:intergenic 50.0%
GGTGATGACAACGCCAAAGA+CGG + chr1_1:68668886-68668905 Msa0039140:CDS 50.0%
GTGATGACAACGCCAAAGAC+GGG + chr1_1:68668887-68668906 Msa0039140:CDS 50.0%
GCGGGGAGTCTGAATTCATT+TGG + chr1_1:68669533-68669552 Msa0039140:intron 50.0%
AACCTGCTTTCAAAGAGGCG+AGG - chr1_1:68669843-68669862 None:intergenic 50.0%
AAGCTAGGGACAGAACTCAG+TGG - chr1_1:68669998-68670017 None:intergenic 50.0%
ACTGAGTTCTGTCCCTAGCT+TGG + chr1_1:68669997-68670016 Msa0039140:intron 50.0%
CTGAGTTCTGTCCCTAGCTT+GGG + chr1_1:68669998-68670017 Msa0039140:intron 50.0%
TGAGTTCTGTCCCTAGCTTG+GGG + chr1_1:68669999-68670018 Msa0039140:intron 50.0%
CTTGTAATCCAGCAGCAGCT+GGG - chr1_1:68670203-68670222 None:intergenic 50.0%
ACTTGTAATCCAGCAGCAGC+TGG - chr1_1:68670204-68670223 None:intergenic 50.0%
GTGGTGAAAGCTGATGCTGA+TGG + chr1_1:68670389-68670408 Msa0039140:CDS 50.0%
TGGTGCATCAGGTCAGTGAT+AGG + chr1_1:68670421-68670440 Msa0039140:intron 50.0%
GGTGCATCAGGTCAGTGATA+GGG + chr1_1:68670422-68670441 Msa0039140:intron 50.0%
! CCTTACCAAACCGGCTCATA+AGG - chr1_1:68670759-68670778 None:intergenic 50.0%
!! CCTTATGAGCCGGTTTGGTA+AGG + chr1_1:68670756-68670775 Msa0039140:intron 50.0%
CCACATGCCAATCACCAGAA+GGG - chr1_1:68671129-68671148 None:intergenic 50.0%
CCTTCTGGTGATTGGCATGT+GGG + chr1_1:68671127-68671146 Msa0039140:CDS 50.0%
GTGGGATGAGAAAAACCAGG+AGG + chr1_1:68671319-68671338 Msa0039140:CDS 50.0%
GGCACAACCGTCATCAAAGA+AGG - chr1_1:68671578-68671597 None:intergenic 50.0%
CTAGCAACATCAGAAGGTGG+AGG + chr1_1:68671745-68671764 Msa0039140:intron 50.0%
! GGTATGATGGAGAGGTTTGG+AGG + chr1_1:68672608-68672627 Msa0039140:CDS 50.0%
TCTCGACACACAGAGTCTTG+AGG + chr1_1:68672636-68672655 Msa0039140:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr1_1:68673260-68673279 None:intergenic 50.0%
CCGCATATGCAGGGTAAGTT+TGG - chr1_1:68673365-68673384 None:intergenic 50.0%
CCAAAGGACTCTTCAGTGAG+GGG - chr1_1:68673525-68673544 None:intergenic 50.0%
CCTCTCAGTCCTGGAGAATT+AGG - chr1_1:68673711-68673730 None:intergenic 50.0%
CCTAATTCTCCAGGACTGAG+AGG + chr1_1:68673708-68673727 Msa0039140:intron 50.0%
TCCAGGACTGAGAGGAAGTA+TGG + chr1_1:68673716-68673735 Msa0039140:intron 50.0%
ACCATACTTCCTCTCAGTCC+TGG - chr1_1:68673720-68673739 None:intergenic 50.0%
TGCTGTTGAACCTCCATCTG+AGG + chr1_1:68674550-68674569 Msa0039140:CDS 50.0%
GCTGTTGAACCTCCATCTGA+GGG + chr1_1:68674551-68674570 Msa0039140:CDS 50.0%
CTGTTGAACCTCCATCTGAG+GGG + chr1_1:68674552-68674571 Msa0039140:CDS 50.0%
TATTCAAGCCCCTCAGATGG+AGG - chr1_1:68674563-68674582 None:intergenic 50.0%
GTGTATTCAAGCCCCTCAGA+TGG - chr1_1:68674566-68674585 None:intergenic 50.0%
CTGAGGGGCTTGAATACACA+TGG + chr1_1:68674567-68674586 Msa0039140:CDS 50.0%
GCTAGGTTTGCATCGTTGTC+AGG + chr1_1:68674656-68674675 Msa0039140:intron 50.0%
ATCGTTGTCAGGTCTAGTCG+AGG + chr1_1:68674667-68674686 Msa0039140:intron 50.0%
CAACGGCGTATGCTCATGAA+CGG + chr1_1:68674769-68674788 Msa0039140:CDS 50.0%
AACGGCGTATGCTCATGAAC+GGG + chr1_1:68674770-68674789 Msa0039140:CDS 50.0%
ATGTCATCTCCATCAGCCTG+CGG + chr1_1:68674799-68674818 Msa0039140:CDS 50.0%
CCGTTAGTCCATATAGCGTG+AGG + chr1_1:68674962-68674981 Msa0039140:CDS 50.0%
! TTTTGATGTCTGTGGGTCGG+TGG - chr1_1:68675757-68675776 None:intergenic 50.0%
!! AGTTTTTGAGGACGGCGATG+TGG - chr1_1:68677127-68677146 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr1_1:68677537-68677556 None:intergenic 50.0%
TTCTGGTAGCACACTAAGGC+TGG + chr1_1:68677594-68677613 Msa0039140:intron 50.0%
AAGTGCCTCATGGTGCATCT+TGG + chr1_1:68677871-68677890 Msa0039140:CDS 50.0%
AGTGCCTCATGGTGCATCTT+GGG + chr1_1:68677872-68677891 Msa0039140:CDS 50.0%
TCAACCCAAGATGCACCATG+AGG - chr1_1:68677879-68677898 None:intergenic 50.0%
!!! GGTGAAGTTTTTGGCAGCAG+GGG - chr1_1:68678085-68678104 None:intergenic 50.0%
GGTAGTAGGTGGTCAGACAT+TGG + chr1_1:68678110-68678129 Msa0039140:CDS 50.0%
GCTTCTGCATCAACTCTGAC+AGG - chr1_1:68678433-68678452 None:intergenic 50.0%
CTAGCATCTGCTTTCCAGAG+GGG - chr1_1:68678662-68678681 None:intergenic 50.0%
GCTAGCATCTGCTTTCCAGA+GGG - chr1_1:68678663-68678682 None:intergenic 50.0%
TGCTAGCATCTGCTTTCCAG+AGG - chr1_1:68678664-68678683 None:intergenic 50.0%
CTCCTTCTTGGAACGTCTAC+TGG + chr1_1:68679111-68679130 Msa0039140:intron 50.0%
GTCCAGTAGACGTTCCAAGA+AGG - chr1_1:68679116-68679135 None:intergenic 50.0%
TAAGCCAGATGGCCCATTGA+TGG + chr1_1:68679935-68679954 Msa0039140:CDS 50.0%
AAGCCAGATGGCCCATTGAT+GGG + chr1_1:68679936-68679955 Msa0039140:CDS 50.0%
TTTCCCATCAATGGGCCATC+TGG - chr1_1:68679942-68679961 None:intergenic 50.0%
GATGGCCCATTGATGGGAAA+TGG + chr1_1:68679942-68679961 Msa0039140:CDS 50.0%
! GGAAGCTTGTCTTTTGGTGG+TGG - chr1_1:68680114-68680133 None:intergenic 50.0%
GATCCTTGCAGAGAGTTCTG+TGG - chr1_1:68680216-68680235 None:intergenic 50.0%
ACTATCATTTGCCGGACAGG+GGG + chr1_1:68680266-68680285 Msa0039140:CDS 50.0%
! GTTTTTATGCTCCCCCTGTC+CGG - chr1_1:68680280-68680299 None:intergenic 50.0%
! ATGATGCAGGGTGCTTCTCT+GGG - chr1_1:68680302-68680321 None:intergenic 50.0%
! TATGATGCAGGGTGCTTCTC+TGG - chr1_1:68680303-68680322 None:intergenic 50.0%
AACACGCGTGTGTGAGATTG+TGG - chr1_1:68680416-68680435 None:intergenic 50.0%
ACAATCTCACACACGCGTGT+TGG + chr1_1:68680415-68680434 Msa0039140:intron 50.0%
ACCTTGGCTGTCATGATGAG+TGG + chr1_1:68681112-68681131 Msa0039140:intron 50.0%
TCCACTCATCATGACAGCCA+AGG - chr1_1:68681116-68681135 None:intergenic 50.0%
GCAAGCAACGGAGTGTACTT+TGG - chr1_1:68681661-68681680 None:intergenic 50.0%
ACACGTGAACACAAAGGGTG+GGG + chr1_1:68681975-68681994 Msa0039140:intron 50.0%
! TCTGGATGATGAGGAAGCAC+AGG + chr1_1:68682424-68682443 Msa0039140:CDS 50.0%
! GGTAAAGTGCCTCTGCTAAC+TGG - chr1_1:68683061-68683080 None:intergenic 50.0%
!! AGCAGAGGCACTTTACCAGA+AGG + chr1_1:68683064-68683083 Msa0039140:CDS 50.0%
!! GCAGAGGCACTTTACCAGAA+GGG + chr1_1:68683065-68683084 Msa0039140:CDS 50.0%
!! CAGAGGCACTTTACCAGAAG+GGG + chr1_1:68683066-68683085 Msa0039140:CDS 50.0%
TTGCCGCAGTAGTCAGTACA+GGG - chr1_1:68683203-68683222 None:intergenic 50.0%
ATTGCCGCAGTAGTCAGTAC+AGG - chr1_1:68683204-68683223 None:intergenic 50.0%
! CACACGAGAAGCGTAGTCAA+AGG + chr1_1:68683642-68683661 Msa0039140:CDS 50.0%
! CCCTAGCTTACCCCTTTTCT+AGG + chr1_1:68683963-68683982 Msa0039140:CDS 50.0%
CCCTAGAAAAGGGGTAAGCT+AGG - chr1_1:68683967-68683986 None:intergenic 50.0%
GCGGGATGGAATTGGATAGG+TGG - chr1_1:68668577-68668596 None:intergenic 55.0%
TTGGCGTTGTCATCACCAGC+GGG - chr1_1:68668883-68668902 None:intergenic 55.0%
GAAGTTGCGGAGAGAAGCAG+TGG - chr1_1:68668929-68668948 None:intergenic 55.0%
ACACCGCGTCCATCATAGTG+TGG - chr1_1:68669030-68669049 None:intergenic 55.0%
GGATGGAGCATGTAGTCAGC+TGG + chr1_1:68669122-68669141 Msa0039140:intron 55.0%
! AGCCTCGCCTCTTTGAAAGC+AGG + chr1_1:68669838-68669857 Msa0039140:intron 55.0%
GCACTCCTCACCTTATGAGC+CGG + chr1_1:68670746-68670765 Msa0039140:intron 55.0%
! CCAAACCGGCTCATAAGGTG+AGG - chr1_1:68670754-68670773 None:intergenic 55.0%
CCTCACCTTATGAGCCGGTT+TGG + chr1_1:68670751-68670770 Msa0039140:intron 55.0%
CCCTTCTGGTGATTGGCATG+TGG + chr1_1:68671126-68671145 Msa0039140:CDS 55.0%
CCCACATGCCAATCACCAGA+AGG - chr1_1:68671130-68671149 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_1:68673295-68673314 Msa0039140:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr1_1:68673374-68673393 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr1_1:68673375-68673394 None:intergenic 55.0%
CCCCTCACTGAAGAGTCCTT+TGG + chr1_1:68673522-68673541 Msa0039140:intron 55.0%
GTGACAGACAGCTCTCCTCA+TGG + chr1_1:68673809-68673828 Msa0039140:CDS 55.0%
ATCATGTCCGTACCTCTGGG+TGG - chr1_1:68673865-68673884 None:intergenic 55.0%
! CTAAGCACTGTTGGTGCACC+TGG + chr1_1:68674458-68674477 Msa0039140:CDS 55.0%
AGTCGAGGACCAACGACTGA+TGG + chr1_1:68674682-68674701 Msa0039140:CDS 55.0%
GTCGAGGACCAACGACTGAT+GGG + chr1_1:68674683-68674702 Msa0039140:CDS 55.0%
TCGAGGACCAACGACTGATG+GGG + chr1_1:68674684-68674703 Msa0039140:CDS 55.0%
CCAACGACTGATGGGGATCT+CGG + chr1_1:68674691-68674710 Msa0039140:CDS 55.0%
ACAGGAGCAATAGCACCACC+AGG - chr1_1:68674733-68674752 None:intergenic 55.0%
CGCCGTTGAAGAGTCCATGT+TGG - chr1_1:68674757-68674776 None:intergenic 55.0%
TGTCATCTCCATCAGCCTGC+GGG + chr1_1:68674800-68674819 Msa0039140:CDS 55.0%
AGGGCCTTCCTCACGCTATA+TGG - chr1_1:68674973-68674992 None:intergenic 55.0%
ATATAGCGTGAGGAAGGCCC+TGG + chr1_1:68674972-68674991 Msa0039140:CDS 55.0%
TTGCATAAGCCCTTGCCCAG+CGG - chr1_1:68675043-68675062 None:intergenic 55.0%
AGGTAGATGCCCCGTGATGA+TGG - chr1_1:68675437-68675456 None:intergenic 55.0%
! GGCAAGCATTAGCCTCTCTC+AGG - chr1_1:68675457-68675476 None:intergenic 55.0%
TTTGAGGACGGCGATGTGGA+AGG - chr1_1:68677123-68677142 None:intergenic 55.0%
CTGAAAAGAGGACCACGCCA+TGG - chr1_1:68677364-68677383 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG + chr1_1:68677529-68677548 Msa0039140:intron 55.0%
!!! GAAGTTTTTGGCAGCAGGGG+AGG - chr1_1:68678082-68678101 None:intergenic 55.0%
GATCGTGACAAACTCCCCTC+TGG + chr1_1:68678645-68678664 Msa0039140:CDS 55.0%
TGTAACCCAGCAACGTACCC+TGG - chr1_1:68679993-68680012 None:intergenic 55.0%
CGCACCTAGTAGACAAGCCA+AGG - chr1_1:68681346-68681365 None:intergenic 55.0%
TTCTGTTGTAGCTGCAGCCG+GGG - chr1_1:68683498-68683517 None:intergenic 55.0%
CTTCTGTTGTAGCTGCAGCC+GGG - chr1_1:68683499-68683518 None:intergenic 55.0%
CCTTCTGTTGTAGCTGCAGC+CGG - chr1_1:68683500-68683519 None:intergenic 55.0%
GCTTCTCGTGTGTCACCAAC+AGG - chr1_1:68683634-68683653 None:intergenic 55.0%
GCGGAGAGAAGCAGTGGCAT+TGG - chr1_1:68668923-68668942 None:intergenic 60.0%
TTGCGCCAAGGTTACCCCTC+AGG - chr1_1:68673248-68673267 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr1_1:68673249-68673268 Msa0039140:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr1_1:68673379-68673398 Msa0039140:intron 60.0%
! CCAGCAACATGGGTGCCATG+AGG - chr1_1:68673827-68673846 None:intergenic 60.0%
CCTCATGGCACCCATGTTGC+TGG + chr1_1:68673824-68673843 Msa0039140:CDS 60.0%
TGCTACTGCGTTCCACCCAG+AGG + chr1_1:68673850-68673869 Msa0039140:CDS 60.0%
CTGCGTTCCACCCAGAGGTA+CGG + chr1_1:68673855-68673874 Msa0039140:intron 60.0%
!! TCGGGCACTGATAGCTGCTG+TGG + chr1_1:68674046-68674065 Msa0039140:CDS 60.0%
!! GGCACTGATAGCTGCTGTGG+AGG + chr1_1:68674049-68674068 Msa0039140:CDS 60.0%
GCACCAACAGTGCTTAGCGC+TGG - chr1_1:68674455-68674474 None:intergenic 60.0%
AGCACTGTTGGTGCACCTGG+TGG + chr1_1:68674461-68674480 Msa0039140:CDS 60.0%
GTTTCTCCTGCTATGGCGGC+TGG + chr1_1:68674518-68674537 Msa0039140:CDS 60.0%
CCGAGATCCCCATCAGTCGT+TGG - chr1_1:68674694-68674713 None:intergenic 60.0%
GGTGTCTGCGTAAGTGCTCC+TGG + chr1_1:68674712-68674731 Msa0039140:CDS 60.0%
GTCTGCGTAAGTGCTCCTGG+TGG + chr1_1:68674715-68674734 Msa0039140:CDS 60.0%
GTCATCTCCATCAGCCTGCG+GGG + chr1_1:68674801-68674820 Msa0039140:CDS 60.0%
TCATCTCCATCAGCCTGCGG+GGG + chr1_1:68674802-68674821 Msa0039140:CDS 60.0%
GAGCAATGCAATTCCCCCGC+AGG - chr1_1:68674818-68674837 None:intergenic 60.0%
! ACGGGGCATCTACCTGAGAG+AGG + chr1_1:68675442-68675461 Msa0039140:CDS 60.0%
! GACTGCAAAGCACCATGGCG+TGG + chr1_1:68677349-68677368 Msa0039140:intron 60.0%
GTTGATCACGGCCACAGGCT+TGG - chr1_1:68677404-68677423 None:intergenic 60.0%
GGTCTGTTGATCACGGCCAC+AGG - chr1_1:68677409-68677428 None:intergenic 60.0%
CACACGCACTCAAGCTGCAC+CGG + chr1_1:68680442-68680461 Msa0039140:intron 60.0%
AACCCGGGACCAGTTAGCAG+AGG + chr1_1:68683049-68683068 Msa0039140:CDS 60.0%
TGCCTCTGCTAACTGGTCCC+GGG - chr1_1:68683054-68683073 None:intergenic 60.0%
GTGCCTCTGCTAACTGGTCC+CGG - chr1_1:68683055-68683074 None:intergenic 60.0%
CTGCTAGTGCAAGCCCCTTC+TGG - chr1_1:68683082-68683101 None:intergenic 60.0%
CCGGCTGCAGCTACAACAGA+AGG + chr1_1:68683497-68683516 Msa0039140:CDS 60.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr1_1:68673380-68673399 Msa0039140:intron 65.0%
! GGGCCAGCGCTAAGCACTGT+TGG + chr1_1:68674449-68674468 Msa0039140:CDS 65.0%
TGAGCACCAGCCGCCATAGC+AGG - chr1_1:68674527-68674546 None:intergenic 65.0%
GCAATTCCCCCGCAGGCTGA+TGG - chr1_1:68674811-68674830 None:intergenic 65.0%
GGCGTAGACCCAGCTGCTGC+TGG + chr1_1:68670192-68670211 Msa0039140:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 68668554 68684168 68668554 ID=Msa0039140;Name=Msa0039140
chr1_1 mRNA 68668554 68684168 68668554 ID=Msa0039140-mRNA-1;Parent=Msa0039140;Name=Msa0039140-mRNA-1;_AED=0.13;_eAED=0.13;_QI=100|0.97|0.97|1|0.94|0.91|35|184|1315
chr1_1 exon 68668554 68668618 68668554 ID=Msa0039140-mRNA-1:exon:22399;Parent=Msa0039140-mRNA-1
chr1_1 exon 68668680 68669066 68668680 ID=Msa0039140-mRNA-1:exon:22400;Parent=Msa0039140-mRNA-1
chr1_1 exon 68670187 68670265 68670187 ID=Msa0039140-mRNA-1:exon:22401;Parent=Msa0039140-mRNA-1
chr1_1 exon 68670358 68670431 68670358 ID=Msa0039140-mRNA-1:exon:22402;Parent=Msa0039140-mRNA-1
chr1_1 exon 68671092 68671201 68671092 ID=Msa0039140-mRNA-1:exon:22403;Parent=Msa0039140-mRNA-1
chr1_1 exon 68671302 68671382 68671302 ID=Msa0039140-mRNA-1:exon:22404;Parent=Msa0039140-mRNA-1
chr1_1 exon 68671749 68671835 68671749 ID=Msa0039140-mRNA-1:exon:22405;Parent=Msa0039140-mRNA-1
chr1_1 exon 68672568 68672710 68672568 ID=Msa0039140-mRNA-1:exon:22406;Parent=Msa0039140-mRNA-1
chr1_1 exon 68673721 68673871 68673721 ID=Msa0039140-mRNA-1:exon:22407;Parent=Msa0039140-mRNA-1
chr1_1 exon 68673948 68674070 68673948 ID=Msa0039140-mRNA-1:exon:22408;Parent=Msa0039140-mRNA-1
chr1_1 exon 68674218 68674301 68674218 ID=Msa0039140-mRNA-1:exon:22409;Parent=Msa0039140-mRNA-1
chr1_1 exon 68674401 68674588 68674401 ID=Msa0039140-mRNA-1:exon:22410;Parent=Msa0039140-mRNA-1
chr1_1 exon 68674678 68674852 68674678 ID=Msa0039140-mRNA-1:exon:22411;Parent=Msa0039140-mRNA-1
chr1_1 exon 68674949 68675070 68674949 ID=Msa0039140-mRNA-1:exon:22412;Parent=Msa0039140-mRNA-1
chr1_1 exon 68675166 68675245 68675166 ID=Msa0039140-mRNA-1:exon:22413;Parent=Msa0039140-mRNA-1
chr1_1 exon 68675432 68675490 68675432 ID=Msa0039140-mRNA-1:exon:22414;Parent=Msa0039140-mRNA-1
chr1_1 exon 68676051 68676205 68676051 ID=Msa0039140-mRNA-1:exon:22415;Parent=Msa0039140-mRNA-1
chr1_1 exon 68677288 68677343 68677288 ID=Msa0039140-mRNA-1:exon:22416;Parent=Msa0039140-mRNA-1
chr1_1 exon 68677847 68677959 68677847 ID=Msa0039140-mRNA-1:exon:22417;Parent=Msa0039140-mRNA-1
chr1_1 exon 68678030 68678200 68678030 ID=Msa0039140-mRNA-1:exon:22418;Parent=Msa0039140-mRNA-1
chr1_1 exon 68678370 68678498 68678370 ID=Msa0039140-mRNA-1:exon:22419;Parent=Msa0039140-mRNA-1
chr1_1 exon 68678594 68678694 68678594 ID=Msa0039140-mRNA-1:exon:22420;Parent=Msa0039140-mRNA-1
chr1_1 exon 68678776 68678893 68678776 ID=Msa0039140-mRNA-1:exon:22421;Parent=Msa0039140-mRNA-1
chr1_1 exon 68679025 68679104 68679025 ID=Msa0039140-mRNA-1:exon:22422;Parent=Msa0039140-mRNA-1
chr1_1 exon 68679378 68679450 68679378 ID=Msa0039140-mRNA-1:exon:22423;Parent=Msa0039140-mRNA-1
chr1_1 exon 68679909 68679994 68679909 ID=Msa0039140-mRNA-1:exon:22424;Parent=Msa0039140-mRNA-1
chr1_1 exon 68680086 68680137 68680086 ID=Msa0039140-mRNA-1:exon:22425;Parent=Msa0039140-mRNA-1
chr1_1 exon 68680219 68680353 68680219 ID=Msa0039140-mRNA-1:exon:22426;Parent=Msa0039140-mRNA-1
chr1_1 exon 68680540 68680608 68680540 ID=Msa0039140-mRNA-1:exon:22427;Parent=Msa0039140-mRNA-1
chr1_1 exon 68681361 68681453 68681361 ID=Msa0039140-mRNA-1:exon:22428;Parent=Msa0039140-mRNA-1
chr1_1 exon 68681649 68681744 68681649 ID=Msa0039140-mRNA-1:exon:22429;Parent=Msa0039140-mRNA-1
chr1_1 exon 68682347 68682445 68682347 ID=Msa0039140-mRNA-1:exon:22430;Parent=Msa0039140-mRNA-1
chr1_1 exon 68683026 68683118 68683026 ID=Msa0039140-mRNA-1:exon:22431;Parent=Msa0039140-mRNA-1
chr1_1 exon 68683482 68683682 68683482 ID=Msa0039140-mRNA-1:exon:22432;Parent=Msa0039140-mRNA-1
chr1_1 exon 68683865 68684168 68683865 ID=Msa0039140-mRNA-1:exon:22433;Parent=Msa0039140-mRNA-1
chr1_1 five_prime_UTR 68668554 68668618 68668554 ID=Msa0039140-mRNA-1:five_prime_utr;Parent=Msa0039140-mRNA-1
chr1_1 five_prime_UTR 68668680 68668714 68668680 ID=Msa0039140-mRNA-1:five_prime_utr;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68668715 68669066 68668715 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68670187 68670265 68670187 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68670358 68670431 68670358 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68671092 68671201 68671092 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68671302 68671382 68671302 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68671749 68671835 68671749 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68672568 68672710 68672568 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68673721 68673871 68673721 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68673948 68674070 68673948 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68674218 68674301 68674218 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68674401 68674588 68674401 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68674678 68674852 68674678 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68674949 68675070 68674949 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68675166 68675245 68675166 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68675432 68675490 68675432 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68676051 68676205 68676051 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68677288 68677343 68677288 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68677847 68677959 68677847 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68678030 68678200 68678030 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68678370 68678498 68678370 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68678594 68678694 68678594 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68678776 68678893 68678776 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68679025 68679104 68679025 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68679378 68679450 68679378 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68679909 68679994 68679909 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68680086 68680137 68680086 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68680219 68680353 68680219 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68680540 68680608 68680540 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68681361 68681453 68681361 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68681649 68681744 68681649 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68682347 68682445 68682347 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68683026 68683118 68683026 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68683482 68683682 68683482 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 CDS 68683865 68683984 68683865 ID=Msa0039140-mRNA-1:cds;Parent=Msa0039140-mRNA-1
chr1_1 three_prime_UTR 68683985 68684168 68683985 ID=Msa0039140-mRNA-1:three_prime_utr;Parent=Msa0039140-mRNA-1
Gene Sequence

>Msa0039140

ATGCATAATCAATTCACATTCATGCGCACACTCCCTTCTCCATTTCTGATCAATCTTCACCGCACAACAAACCCAAACTTCTTCATCAGAAGATGCAATTGGTCATTTGTCTCCGTTTCCAAACCAATGCTTAATCTTTGCTCTTCTTCCTTCACTTCTTCTCAACCCGCTGGTGATGACAACGCCAAAGACGGGAACAATAACACCAATGCCACTGCTTCTCTCCGCAACTTCAAGCTCAATCAGTCTACTTTCTTGGCTTCTCTTATGCCTAAAACGGAAATTGGCGTCGATCGTTTCCTCCATTTGTATCCACACTATGATGGACGCGGTGTTCTCATCGCTATTTTTGATTCTGGCGTAGACCCAGCTGCTGCTGGATTACAAGTTACCTCTGATGGGAAACCAAAAATTCTTGATATCCTTGATTGCACTGGGAGTGGAGATATTGATACATCAAAAGTGGTGAAAGCTGATGCTGATGGTTGTATTTCTGGTGCATCAGGTGCTTCTTTGGCTATCAACACTTCATGGAAAAACCCTTCTGGTGATTGGCATGTGGGTTATAAATTGGTTTACGAGCTTTTTACAGAAACATTGACCTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCTAAGACTGTAAAACAACTTAGTGATTTTGATCAGCAACATCAGAAGGTGGAGGATGCTAAACTCAAAAAGGCTCGTGAAGATCTCCAGAATAAACTTGATCTTCTTAGAAAGCATTCCGAGAGCTATGATGATAAAGGGCCTGCCATAGATGCTGTTGTTTGGTATGATGGAGAGGTTTGGAGGGTCGCTCTCGACACACAGAGTCTTGAGGATGATTCAGATTGTGGGAGGCTTGCTAACTTTGTACCCTTGACTAATTATAGGACTGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTGCATTTGTAGTGAATGTCTATAACGATGGAAATGTCTTAAGTATTGTGACAGACAGCTCTCCTCATGGCACCCATGTTGCTGGTATTGCTACTGCGTTCCACCCAGAGGAGCCTTTGTTGAATGGAGTTGCACCCGGAGCACAATTAATCTCTTGTAAAATTGGAGACTCTCGGTTAGGTTCAATGGAAACTGGAACTGGTTTGACTCGGGCACTGATAGCTGCTGTGGAGCATAAATGCGATCTTATAAACATGAGTTATGGGGAGCCAACATTGTTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGATGTGGTAAACAAGCACCGTCTGATATTTGTAAGCAGTGCTGGTAATAGTGGGCCAGCGCTAAGCACTGTTGGTGCACCTGGTGGTACGTCTTCAAGTATCATAGGTGTCGGCGCTTATGTTTCTCCTGCTATGGCGGCTGGTGCTCACTGTGCTGTTGAACCTCCATCTGAGGGGCTTGAATACACATGGTCTAGTCGAGGACCAACGACTGATGGGGATCTCGGTGTCTGCGTAAGTGCTCCTGGTGGTGCTATTGCTCCTGTTCCAACATGGACTCTTCAACGGCGTATGCTCATGAACGGGACATCAATGTCATCTCCATCAGCCTGCGGGGGAATTGCATTGCTCATAAGCGCTATGAAGGAAGAGGGAATTCCCGTTAGTCCATATAGCGTGAGGAAGGCCCTGGAGAACACTTCTGTTCCAATTGGTGATTCACCAGAGGATAAATTATCCGCTGGGCAAGGGCTTATGCAAGTTGACAAGTGTTATGAATATATACAGCAGTCTCGAAATATTCCATGTGTTTGGTATCAAATAAACATCAATCAATCTGGAAAATCAAATCCATCATCACGGGGCATCTACCTGAGAGAGGCTAATGCTTGCCAACAATCTACTGAGTGGACTGTGAAAGTTGATCCTAAATTTCATGAAGACGCCAACAAGCTTGAAGATTTGGTTGTATTTGAAGAGTGCATTGAGTTGCACTCTTCAGATAGCACAGTTGTGAAAGCTCCCGAATATCTACTGCTCACTCATAACGGTCGCACATTCAACATATTAGTGGATCCTACCAATTTATGTGATGGTCTGCATTATTACGAAGTCTACGGCCATATAGAAAGGAAATATATAGAAGTGCCTCATGGTGCATCTTGGGTTGAAGCAACCATGAACTTATCAAGTTTTGATACCCCCAGAAGATTTTTTGTGGATACAGTTCAGATATGTCCATTGCAAAGACCTTTGAAATGGCGGAGTGTTATAACTTTTTCCTCCCCTGCTGCCAAAAACTTCACCTTTAAGGTAGTAGGTGGTCAGACATTGGAGCTAGTCATAGCTCAGTTTTGGTCAAGTGGAATAGGGAGTCATGAGACTACGAATGTGGATCTTAAGATTGTGTTTCATGGTATAAAAGCTAGTCAAGAGGTAATTGTACTTGATGGGAGTGAAGCACCTGTCAGAGTTGATGCAGAAGCACTACTGGCATCCGAGAAACTTACACCTGTAGCAAATCTAAATAAGATAAGAGTCCCATATCGACCTGTAGATTCTAAGATCAGCGCACTTTCAAATGATCGTGACAAACTCCCCTCTGGAAAGCAGATGCTAGCACTGACATTAACATACAAGGTCAAATTGGATGATGGAGCTGAAATAAAACCTCAAATACCATTTCTAAATGGTCGGATATATGACACTAAGTTTGAGTCTCAGTTTTATATGATTTCCGATTCAAATAAGCGAGTATATTCAAGTGGAGATGCCTATCCAAACTCTACAAAACTCCCCAAAGGAGAATACAGTTTACAACTATATGTAAGGCATGAAGACTTGCAGATTTTGGAAAAGATGAAGCATCTGGTGTTATTCATTGAGAGAAATTTAGAAGATAAGGACATCATTCGGTTAAGCTTTTTCTCTAAGCCAGATGGCCCATTGATGGGAAATGGTTCCTTTAAGTCCTCAACATTAATTCCAGGCATAAAAGAAGGATTTTATCTTGGTCCACCACCAAAAGACAAGCTTCCCAAGAACTCTCTGCAAGGATCTGTATTGGTCGGATCAATATCATATGGAAAACTATCATTTGCCGGACAGGGGGAGCATAAAAACCCAGAGAAGCACCCTGCATCATATCGAATTTCTTATATAGTTCCTCCAAATAAGATTGACGAGGACAAAGGAAAAACTTCTTTATCTTCCAAGAAGACTGTTTCTGAACGTTTAGAAGAAGAGGTGCGAGATGCAAAAATGAAAGTGCTAGGAGGGATAAAACAAGAAAGTGATGAAGATCTCTTAGAATGGAACAAGTTGTCTGTCTTGCTCAAGTCGGAATATCCAAAGTACACTCCGTTGCTTGCAAAGATTTTGGAAGGCTTGGTTTCTAGGAGTAATATCAAAGACAAATCCCATCATCATGAAGAGATAATTAATGCAGCAAATGAGGTGATCGACAGTATTGATAGAGAAGAGCTGGCAAAAAATTTTGCACTGAAAAGTGATCTGGATGATGAGGAAGCACAGAAAACCAAGAAAAAGATAGAATCAACCCGGGACCAGTTAGCAGAGGCACTTTACCAGAAGGGGCTTGCACTAGCAGAAATCGAGTCTTTAAAGGAGGTAGATAACTCCCCGGCTGCAGCTACAACAGAAGGTGCAAATCCCGTCGAGCAATCAAAGGATGACGGCATTCATCCAGATTTGTTTGATGAAAACTTTAAGGAACTGAAGAAATGGGTTGACGTTAAGTGCACAAAATATGGGATCCTGTTGGTGACACACGAGAAGCGTAGTCAAAGGATTGGGACAGCATTGAAGGTACTAACTGACATAATTCAAGACGATACTGAGCCTGCAAAGAAGAAACTATATGAACTAAAGCTCTATAAGAGACAGTGGATGCTTGTACGTTTTCCCCCTAGCTTACCCCTTTTCTAG
Protein sequence

>Msa0039140

MHNQFTFMRTLPSPFLINLHRTTNPNFFIRRCNWSFVSVSKPMLNLCSSSFTSSQPAGDDNAKDGNNNTNATASLRNFKLNQSTFLASLMPKTEIGVDRFLHLYPHYDGRGVLIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKVVKADADGCISGASGASLAINTSWKNPSGDWHVGYKLVYELFTETLTSRLKKERKKKWDEKNQEEIAKTVKQLSDFDQQHQKVEDAKLKKAREDLQNKLDLLRKHSESYDDKGPAIDAVVWYDGEVWRVALDTQSLEDDSDCGRLANFVPLTNYRTERKYGVFSKLDACAFVVNVYNDGNVLSIVTDSSPHGTHVAGIATAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNDVVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCAVEPPSEGLEYTWSSRGPTTDGDLGVCVSAPGGAIAPVPTWTLQRRMLMNGTSMSSPSACGGIALLISAMKEEGIPVSPYSVRKALENTSVPIGDSPEDKLSAGQGLMQVDKCYEYIQQSRNIPCVWYQININQSGKSNPSSRGIYLREANACQQSTEWTVKVDPKFHEDANKLEDLVVFEECIELHSSDSTVVKAPEYLLLTHNGRTFNILVDPTNLCDGLHYYEVYGHIERKYIEVPHGASWVEATMNLSSFDTPRRFFVDTVQICPLQRPLKWRSVITFSSPAAKNFTFKVVGGQTLELVIAQFWSSGIGSHETTNVDLKIVFHGIKASQEVIVLDGSEAPVRVDAEALLASEKLTPVANLNKIRVPYRPVDSKISALSNDRDKLPSGKQMLALTLTYKVKLDDGAEIKPQIPFLNGRIYDTKFESQFYMISDSNKRVYSSGDAYPNSTKLPKGEYSLQLYVRHEDLQILEKMKHLVLFIERNLEDKDIIRLSFFSKPDGPLMGNGSFKSSTLIPGIKEGFYLGPPPKDKLPKNSLQGSVLVGSISYGKLSFAGQGEHKNPEKHPASYRISYIVPPNKIDEDKGKTSLSSKKTVSERLEEEVRDAKMKVLGGIKQESDEDLLEWNKLSVLLKSEYPKYTPLLAKILEGLVSRSNIKDKSHHHEEIINAANEVIDSIDREELAKNFALKSDLDDEEAQKTKKKIESTRDQLAEALYQKGLALAEIESLKEVDNSPAAATTEGANPVEQSKDDGIHPDLFDENFKELKKWVDVKCTKYGILLVTHEKRSQRIGTALKVLTDIIQDDTEPAKKKLYELKLYKRQWMLVRFPPSLPLF*