AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0860630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0860630 MtrunA17_Chr5g0439941 87.770 139 14 2 1 139 1 136 6.18e-77 226
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0860630 AT3G44020.1 66.265 83 20 2 62 139 58 137 7.39e-31 109

Find 32 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGCCATTAAACAGCAAAA+TGG 0.276035 5_4:+59474638 None:intergenic
TTCTCTCTTCCTTGGCTTCA+AGG 0.279546 5_4:-59474544 Msa0860630:intron
TCTTGCTACTGTTAGTGTTT+TGG 0.296738 5_4:-59474580 Msa0860630:CDS
TGCAAGAAATGTGCAGGTTC+TGG 0.343838 5_4:-59472159 Msa0860630:CDS
ATTGCTCTTTCTCTCTTCCT+TGG 0.362846 5_4:-59474552 Msa0860630:CDS
AAGCCATTAAACAGCAAAAT+GGG 0.370822 5_4:+59474639 None:intergenic
GTCCATGATCATCAAGAATC+TGG 0.395675 5_4:+59474662 None:intergenic
GTTCAAAGCTCATAATCTTC+GGG 0.420318 5_4:+59472131 None:intergenic
AGTTCAAAGCTCATAATCTT+CGG 0.422121 5_4:+59472130 None:intergenic
TTCGTCTGCATTTGGAGGAT+TGG 0.450992 5_4:+59474697 None:intergenic
GGAGGATTGGAAGTAGAACT+TGG 0.460291 5_4:+59474710 None:intergenic
ATCCAGATTCTTGATGATCA+TGG 0.464032 5_4:-59474664 Msa0860630:CDS
CTTGAAGAAGAAGAAGATAG+AGG 0.483415 5_4:+59474804 None:intergenic
TTGTATGTGGAGCTAAGTTA+AGG 0.484548 5_4:+59474900 None:intergenic
AGGAGAAGAAGAAAGATGAA+TGG 0.496278 5_4:+59474779 None:intergenic
TTGGATGAAGAAGAAGGTTG+TGG 0.522130 5_4:+59474729 None:intergenic
TAGAACTTGGATGAAGAAGA+AGG 0.541383 5_4:+59474723 None:intergenic
GTACTCTGCAAGAAATGTGC+AGG 0.545148 5_4:-59472165 Msa0860630:CDS
TATGCATATAGCAATTATCA+AGG 0.550003 5_4:+59471983 None:intergenic
AATTATCAAGGACACATCAA+AGG 0.556019 5_4:+59471995 None:intergenic
AGAGAAGATGTAGAAGAACA+AGG 0.567040 5_4:+59474759 None:intergenic
ATTATCAAGGACACATCAAA+GGG 0.571504 5_4:+59471996 None:intergenic
TTGTAGTTACCTTGAAGCCA+AGG 0.574832 5_4:+59474535 None:intergenic
TGTGAGCGATGTGGTGGCAA+CGG 0.597613 5_4:-59473540 Msa0860630:intron
CAAGATCTTGCAGATGTCAG+AGG 0.611544 5_4:+59472083 None:intergenic
GTTGCCACCACATCGCTCAC+AGG 0.615446 5_4:+59473542 None:intergenic
CCACATCGCTCACAGGACAC+CGG 0.618890 5_4:+59473549 None:intergenic
GTGTCCTGTGAGCGATGTGG+TGG 0.626347 5_4:-59473546 Msa0860630:CDS
AAGGAAGAGAGAAAGAGCAA+TGG 0.658609 5_4:+59474554 None:intergenic
ATGAATGATGCATCAAAGAA+CGG 0.664424 5_4:+59471891 None:intergenic
AGCCATTAAACAGCAAAATG+GGG 0.675128 5_4:+59474640 None:intergenic
CCGGTGTCCTGTGAGCGATG+TGG 0.724930 5_4:-59473549 Msa0860630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTGTATTGTATG+TGG + chr5_4:59471870-59471889 None:intergenic 15.0%
!!! TTTCTTTTTCTTTTTATCAA+TGG - chr5_4:59471901-59471920 Msa0860630:three_prime_UTR 15.0%
!! AAACAACAAATACATTATTA+TGG + chr5_4:59472291-59472310 None:intergenic 15.0%
!!! TGTTTTTGTTAATATAGTTA+TGG - chr5_4:59472306-59472325 Msa0860630:intron 15.0%
!! GAAATGTTTGATAAAATTAA+CGG + chr5_4:59472649-59472668 None:intergenic 15.0%
!! ATTATTAATGCTTTATACTT+TGG - chr5_4:59473299-59473318 Msa0860630:intron 15.0%
!!! TTATAATTTTGGTTCAAAAT+TGG + chr5_4:59473471-59473490 None:intergenic 15.0%
!! TACATACAAAAAATTGTTAT+TGG - chr5_4:59474209-59474228 Msa0860630:intron 15.0%
!!! TCTTTTGCAAAATTTTTACA+CGG - chr5_4:59472851-59472870 Msa0860630:intron 20.0%
!! ACAAACTTATTATCAATAAC+TGG + chr5_4:59472949-59472968 None:intergenic 20.0%
!!! ATTTTTAATATTAGCAGTGA+GGG - chr5_4:59473340-59473359 Msa0860630:intron 20.0%
!!! CCAAAAATAGCTTATAATTT+TGG + chr5_4:59473482-59473501 None:intergenic 20.0%
!!! CCAAAATTATAAGCTATTTT+TGG - chr5_4:59473479-59473498 Msa0860630:intron 20.0%
!! AATAAAAACATAGTAACTAG+TGG + chr5_4:59473626-59473645 None:intergenic 20.0%
!! AAAAAACATTCTACTAAAGA+TGG + chr5_4:59474306-59474325 None:intergenic 20.0%
!!! ATCTTTAGTAGAATGTTTTT+TGG - chr5_4:59474305-59474324 Msa0860630:intron 20.0%
!! AAAACCAACAATATATTTCA+CGG - chr5_4:59474521-59474540 Msa0860630:intron 20.0%
!!! AGAAATGTGTTCATTTTAGT+GGG - chr5_4:59472777-59472796 Msa0860630:intron 25.0%
! AAATCAAACTCATGAATTGA+TGG + chr5_4:59472819-59472838 None:intergenic 25.0%
!! CAATGTTATTCATGATTTTG+TGG - chr5_4:59472885-59472904 Msa0860630:intron 25.0%
!!! TGATTTTGTGGTTTTTAAGA+TGG - chr5_4:59472897-59472916 Msa0860630:intron 25.0%
! TTGATTGGAAAAACCTTTAT+TGG - chr5_4:59472994-59473013 Msa0860630:intron 25.0%
! TGATTGGAAAAACCTTTATT+GGG - chr5_4:59472995-59473014 Msa0860630:intron 25.0%
!! TTTGGTAACAATAAACTTGT+GGG - chr5_4:59473122-59473141 Msa0860630:intron 25.0%
!!! TCAATGTTGATACTTTGTTT+TGG - chr5_4:59473145-59473164 Msa0860630:intron 25.0%
!!! GCTTTTTTGTTGTTTTTCTA+TGG - chr5_4:59473274-59473293 Msa0860630:intron 25.0%
!! CATTTTTAATATTAGCAGTG+AGG - chr5_4:59473339-59473358 Msa0860630:intron 25.0%
!!! TTAAAAACATTGACTTAGCT+AGG - chr5_4:59473380-59473399 Msa0860630:intron 25.0%
!!! TAAAAACATTGACTTAGCTA+GGG - chr5_4:59473381-59473400 Msa0860630:intron 25.0%
! ACTAGAACAGTTAAAACATT+GGG + chr5_4:59473958-59473977 None:intergenic 25.0%
! TGCTTTGTATATGAAGTAAA+TGG - chr5_4:59474010-59474029 Msa0860630:intron 25.0%
! GCTTTGTATATGAAGTAAAT+GGG - chr5_4:59474011-59474030 Msa0860630:intron 25.0%
!!! AAATGTGTTTTTTGCAACAA+CGG - chr5_4:59474109-59474128 Msa0860630:intron 25.0%
!!! TTAGTAGAATGTTTTTTGGT+AGG - chr5_4:59474309-59474328 Msa0860630:intron 25.0%
! GATTTATTCAAATTCCAGTA+TGG + chr5_4:59474370-59474389 None:intergenic 25.0%
!! GATATAGTGTTGTTAAATAG+TGG - chr5_4:59474422-59474441 Msa0860630:intron 25.0%
! TATACCGTGAAATATATTGT+TGG + chr5_4:59474528-59474547 None:intergenic 25.0%
!! TAATTCACATTTTGTAGGAT+TGG - chr5_4:59474567-59474586 Msa0860630:CDS 25.0%
! TATGCATATAGCAATTATCA+AGG + chr5_4:59474774-59474793 None:intergenic 25.0%
! ATCAAGAATCTGGATTTTGT+TGG + chr5_4:59472085-59472104 None:intergenic 30.0%
AAGCCATTAAACAGCAAAAT+GGG + chr5_4:59472118-59472137 None:intergenic 30.0%
TAAGCCATTAAACAGCAAAA+TGG + chr5_4:59472119-59472138 None:intergenic 30.0%
!!! ATTTTGCTGTTTAATGGCTT+AGG - chr5_4:59472118-59472137 Msa0860630:exon 30.0%
TTTGGTAAAAACGTATCAGA+TGG + chr5_4:59472715-59472734 None:intergenic 30.0%
! TTTTTACCAAACAGAACCTT+AGG - chr5_4:59472724-59472743 Msa0860630:intron 30.0%
TAGTAACCAAAAAGAACCTT+AGG - chr5_4:59472753-59472772 Msa0860630:intron 30.0%
! CAGAAATGTGTTCATTTTAG+TGG - chr5_4:59472776-59472795 Msa0860630:intron 30.0%
!!! TTGTGGTTTTTAAGATGGTA+TGG - chr5_4:59472902-59472921 Msa0860630:intron 30.0%
ATTCAATTATGAGTTTCTGC+TGG - chr5_4:59472969-59472988 Msa0860630:intron 30.0%
GATTGGAAAAACCTTTATTG+GGG - chr5_4:59472996-59473015 Msa0860630:intron 30.0%
GAACTTCAGATATCTATTGT+AGG - chr5_4:59473040-59473059 Msa0860630:intron 30.0%
! GTTTGGTAACAATAAACTTG+TGG - chr5_4:59473121-59473140 Msa0860630:intron 30.0%
!!! GATACTTTGTTTTGGACTTT+TGG - chr5_4:59473153-59473172 Msa0860630:intron 30.0%
GGTAATTATCTTTCTGCATT+TGG - chr5_4:59473235-59473254 Msa0860630:intron 30.0%
CAGAGTGATACTTTATTGAA+AGG + chr5_4:59473678-59473697 None:intergenic 30.0%
! ATAAAGTATCACTCTGTAGA+TGG - chr5_4:59473682-59473701 Msa0860630:intron 30.0%
CACTAGAACAGTTAAAACAT+TGG + chr5_4:59473959-59473978 None:intergenic 30.0%
ATGTTTGTTCCTTAATCAAG+AGG - chr5_4:59473982-59474001 Msa0860630:intron 30.0%
AAATGCCATTATTGATAAGC+AGG - chr5_4:59474079-59474098 Msa0860630:intron 30.0%
ATTCTACTAAAGATGGTACA+GGG + chr5_4:59474299-59474318 None:intergenic 30.0%
AAACCAGTGTTGTAAAATAG+CGG - chr5_4:59474332-59474351 Msa0860630:intron 30.0%
! GTGTCTAATTCACATTTTGT+AGG - chr5_4:59474562-59474581 Msa0860630:CDS 30.0%
AGTTCAAAGCTCATAATCTT+CGG + chr5_4:59474627-59474646 None:intergenic 30.0%
ATTATCAAGGACACATCAAA+GGG + chr5_4:59474761-59474780 None:intergenic 30.0%
AATTATCAAGGACACATCAA+AGG + chr5_4:59474762-59474781 None:intergenic 30.0%
ATGAATGATGCATCAAAGAA+CGG + chr5_4:59474866-59474885 None:intergenic 30.0%
CTTGAAGAAGAAGAAGATAG+AGG + chr5_4:59471953-59471972 None:intergenic 35.0%
AGGAGAAGAAGAAAGATGAA+TGG + chr5_4:59471978-59471997 None:intergenic 35.0%
AGAGAAGATGTAGAAGAACA+AGG + chr5_4:59471998-59472017 None:intergenic 35.0%
TAGAACTTGGATGAAGAAGA+AGG + chr5_4:59472034-59472053 None:intergenic 35.0%
! ATCCAGATTCTTGATGATCA+TGG - chr5_4:59472090-59472109 Msa0860630:three_prime_UTR 35.0%
AGCCATTAAACAGCAAAATG+GGG + chr5_4:59472117-59472136 None:intergenic 35.0%
! TCTTGCTACTGTTAGTGTTT+TGG - chr5_4:59472174-59472193 Msa0860630:intron 35.0%
! GTAGTGATTCTTGTTTCATG+AGG - chr5_4:59472453-59472472 Msa0860630:intron 35.0%
AGAAGTAGCGTCTCAAAAAA+TGG + chr5_4:59472505-59472524 None:intergenic 35.0%
! TTTCTGCCTAAGGTTCTTTT+TGG + chr5_4:59472762-59472781 None:intergenic 35.0%
AATGAACACATTTCTGCCTA+AGG + chr5_4:59472772-59472791 None:intergenic 35.0%
!! TTCATTTTAGTGGGTCCAAA+TGG - chr5_4:59472786-59472805 Msa0860630:intron 35.0%
ATTGATGGAGTTAGTCCATT+TGG + chr5_4:59472804-59472823 None:intergenic 35.0%
CCAAACGAAATAACTTCTTC+TGG + chr5_4:59473107-59473126 None:intergenic 35.0%
! CCAGAAGAAGTTATTTCGTT+TGG - chr5_4:59473104-59473123 Msa0860630:intron 35.0%
CTAGGGTAACTGTTGTTAAA+AGG - chr5_4:59473398-59473417 Msa0860630:intron 35.0%
GACAAAGCAGATATAGAAAG+GGG + chr5_4:59473656-59473675 None:intergenic 35.0%
GGACAAAGCAGATATAGAAA+GGG + chr5_4:59473657-59473676 None:intergenic 35.0%
AGGACAAAGCAGATATAGAA+AGG + chr5_4:59473658-59473677 None:intergenic 35.0%
GTAGATGGAGATACATTGTA+TGG - chr5_4:59473697-59473716 Msa0860630:intron 35.0%
! TTAAAACATTGGGAGTGCAA+TGG + chr5_4:59473948-59473967 None:intergenic 35.0%
TTCCACCTGCTTATCAATAA+TGG + chr5_4:59474087-59474106 None:intergenic 35.0%
CATTCTACTAAAGATGGTAC+AGG + chr5_4:59474300-59474319 None:intergenic 35.0%
GTTCAAAGCTCATAATCTTC+GGG + chr5_4:59474626-59474645 None:intergenic 35.0%
TTGGATGAAGAAGAAGGTTG+TGG + chr5_4:59472028-59472047 None:intergenic 40.0%
!!! TGTTGGTTTTCGTCTGCATT+TGG + chr5_4:59472068-59472087 None:intergenic 40.0%
GTCCATGATCATCAAGAATC+TGG + chr5_4:59472095-59472114 None:intergenic 40.0%
!!! GACCCCATTTTGCTGTTTAA+TGG - chr5_4:59472112-59472131 Msa0860630:three_prime_UTR 40.0%
AAGGAAGAGAGAAAGAGCAA+TGG + chr5_4:59472203-59472222 None:intergenic 40.0%
ATTGCTCTTTCTCTCTTCCT+TGG - chr5_4:59472202-59472221 Msa0860630:intron 40.0%
TTGTAGTTACCTTGAAGCCA+AGG + chr5_4:59472222-59472241 None:intergenic 40.0%
!! GTTTTTCGAAACCACTAGCT+CGG - chr5_4:59472407-59472426 Msa0860630:intron 40.0%
!! ATTTTGATCATCCGAGCTAG+TGG + chr5_4:59472421-59472440 None:intergenic 40.0%
!!! TTTTGAGACGCTACTTCTAG+TGG - chr5_4:59472507-59472526 Msa0860630:intron 40.0%
TTGGTTACTATACACGCCTA+AGG + chr5_4:59472743-59472762 None:intergenic 40.0%
!!! GAGTTTCTGCTGGTTTTGAT+TGG - chr5_4:59472979-59472998 Msa0860630:intron 40.0%
TGGAAAAACCTTTATTGGGG+TGG - chr5_4:59472999-59473018 Msa0860630:intron 40.0%
GGAAAAACCTTTATTGGGGT+GGG - chr5_4:59473000-59473019 Msa0860630:intron 40.0%
GAAAAACCTTTATTGGGGTG+GGG - chr5_4:59473001-59473020 Msa0860630:intron 40.0%
AAAAACCTTTATTGGGGTGG+GGG - chr5_4:59473002-59473021 Msa0860630:intron 40.0%
!!! GACTTTTGGTAACGAGTGAT+GGG - chr5_4:59473167-59473186 Msa0860630:intron 40.0%
!!! ACTTTTGGTAACGAGTGATG+GGG - chr5_4:59473168-59473187 Msa0860630:intron 40.0%
GGGTAACTGTTGTTAAAAGG+AGG - chr5_4:59473401-59473420 Msa0860630:intron 40.0%
AGCAGATATAGAAAGGGGTA+AGG + chr5_4:59473651-59473670 None:intergenic 40.0%
ATTGTATGGCTATGTGTCGT+CGG - chr5_4:59473711-59473730 Msa0860630:intron 40.0%
! GTCAGTGTCACTGTTGTATT+AGG + chr5_4:59473765-59473784 None:intergenic 40.0%
CTATGTAGACATGTCCAACT+CGG + chr5_4:59473851-59473870 None:intergenic 40.0%
GACATGTCTACATAGGTCAT+TGG - chr5_4:59473856-59473875 Msa0860630:intron 40.0%
CTACATAGGTCATTGGAATG+AGG - chr5_4:59473863-59473882 Msa0860630:intron 40.0%
GTCATTGGAATGAGGAAAGA+AGG - chr5_4:59473871-59473890 Msa0860630:intron 40.0%
AGCAAGACTCCTCTTGATTA+AGG + chr5_4:59473994-59474013 None:intergenic 40.0%
TGCCATTATTGATAAGCAGG+TGG - chr5_4:59474082-59474101 Msa0860630:intron 40.0%
CGGCAAGATGAAAAAAGAGA+CGG - chr5_4:59474129-59474148 Msa0860630:intron 40.0%
GGCAAGATGAAAAAAGAGAC+GGG - chr5_4:59474130-59474149 Msa0860630:intron 40.0%
GCAAGATGAAAAAAGAGACG+GGG - chr5_4:59474131-59474150 Msa0860630:intron 40.0%
GTTGACTGCAAAGTATGCAA+GGG - chr5_4:59474157-59474176 Msa0860630:intron 40.0%
!! TAGCCGCTATTTTACAACAC+TGG + chr5_4:59474338-59474357 None:intergenic 40.0%
GCTAAGCTACAATGCTATAG+TGG + chr5_4:59474456-59474475 None:intergenic 40.0%
! AAGAGTGCAGTGAAAAAGCG+TGG + chr5_4:59471927-59471946 None:intergenic 45.0%
GGAGGATTGGAAGTAGAACT+TGG + chr5_4:59472047-59472066 None:intergenic 45.0%
TTCGTCTGCATTTGGAGGAT+TGG + chr5_4:59472060-59472079 None:intergenic 45.0%
! TGGTTTTCGTCTGCATTTGG+AGG + chr5_4:59472065-59472084 None:intergenic 45.0%
TTCTCTCTTCCTTGGCTTCA+AGG - chr5_4:59472210-59472229 Msa0860630:intron 45.0%
TACACGCCTAAGGTTCTGTT+TGG + chr5_4:59472733-59472752 None:intergenic 45.0%
!!! GGACTTTTGGTAACGAGTGA+TGG - chr5_4:59473166-59473185 Msa0860630:intron 45.0%
! TACTTTGGTCTGAGAGTGTG+AGG - chr5_4:59473314-59473333 Msa0860630:intron 45.0%
! CGAGTTGGACATGTCTACAT+AGG - chr5_4:59473849-59473868 Msa0860630:intron 45.0%
GATGAAAAAAGAGACGGGGT+TGG - chr5_4:59474135-59474154 Msa0860630:intron 45.0%
GGTTGACTGCAAAGTATGCA+AGG - chr5_4:59474156-59474175 Msa0860630:intron 45.0%
TGCAAAGTATGCAAGGGTTC+AGG - chr5_4:59474163-59474182 Msa0860630:intron 45.0%
! TTTTCCACGATCTGCGATTC+TGG - chr5_4:59474496-59474515 Msa0860630:intron 45.0%
GTACTCTGCAAGAAATGTGC+AGG - chr5_4:59474589-59474608 Msa0860630:CDS 45.0%
TGCAAGAAATGTGCAGGTTC+TGG - chr5_4:59474595-59474614 Msa0860630:CDS 45.0%
CAAGATCTTGCAGATGTCAG+AGG + chr5_4:59474674-59474693 None:intergenic 45.0%
!! ATTATTTAATATGAATAATT+TGG - chr5_4:59474264-59474283 Msa0860630:intron 5.0%
!! TTATTTAATATGAATAATTT+GGG - chr5_4:59474265-59474284 Msa0860630:intron 5.0%
ACAAACCCCCACCCCAATAA+AGG + chr5_4:59473010-59473029 None:intergenic 50.0%
TTTATTGGGGTGGGGGTTTG+TGG - chr5_4:59473009-59473028 Msa0860630:intron 50.0%
GTGGGGGTTTGTGGTTTGAA+TGG - chr5_4:59473018-59473037 Msa0860630:intron 50.0%
!! AACGAGTGATGGGGTTTTGC+AGG - chr5_4:59473177-59473196 Msa0860630:intron 50.0%
!! ACGAGTGATGGGGTTTTGCA+GGG - chr5_4:59473178-59473197 Msa0860630:intron 50.0%
AAGGAGGATTGAGTGAGCGA+TGG - chr5_4:59473417-59473436 Msa0860630:intron 50.0%
TGAGCGATGGTGCAAAAGAG+AGG - chr5_4:59473430-59473449 Msa0860630:intron 50.0%
GAGCGATGGTGCAAAAGAGA+GGG - chr5_4:59473431-59473450 Msa0860630:intron 50.0%
CCATATGCCCTCGTGTAAGA+CGG - chr5_4:59473586-59473605 Msa0860630:intron 50.0%
!! TGAAGCACCGTCTTACACGA+GGG + chr5_4:59473596-59473615 None:intergenic 50.0%
!! ATGAAGCACCGTCTTACACG+AGG + chr5_4:59473597-59473616 None:intergenic 50.0%
CGAACTACACACGTGAGTGT+TGG - chr5_4:59473822-59473841 Msa0860630:intron 50.0%
GGCTATAGTGTACGCCATAC+TGG - chr5_4:59474353-59474372 Msa0860630:intron 50.0%
TTCACCAGAATCGCAGATCG+TGG + chr5_4:59474503-59474522 None:intergenic 50.0%
! TGGGGTTTTGCAGGGTGATC+CGG - chr5_4:59473186-59473205 Msa0860630:intron 55.0%
TGTGAGCGATGTGGTGGCAA+CGG - chr5_4:59473214-59473233 Msa0860630:intron 55.0%
! CCGTCTTACACGAGGGCATA+TGG + chr5_4:59473589-59473608 None:intergenic 55.0%
!! GTGAGTGTTGGACACCGAGT+TGG - chr5_4:59473834-59473853 Msa0860630:intron 55.0%
CCACATCGCTCACAGGACAC+CGG + chr5_4:59473208-59473227 None:intergenic 60.0%
GTGTCCTGTGAGCGATGTGG+TGG - chr5_4:59473208-59473227 Msa0860630:intron 60.0%
GTTGCCACCACATCGCTCAC+AGG + chr5_4:59473215-59473234 None:intergenic 60.0%
CCGGTGTCCTGTGAGCGATG+TGG - chr5_4:59473205-59473224 Msa0860630:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 59471855 59474921 59471855 ID=Msa0860630;Name=Msa0860630
chr5_4 mRNA 59471855 59474921 59471855 ID=Msa0860630-mRNA-1;Parent=Msa0860630;Name=Msa0860630-mRNA-1;_AED=0.02;_eAED=0.02;_QI=65|0.66|0.75|1|1|1|4|278|158
chr5_4 exon 59471855 59472192 59471855 ID=Msa0860630-mRNA-1:exon:18245;Parent=Msa0860630-mRNA-1
chr5_4 exon 59472608 59472675 59472608 ID=Msa0860630-mRNA-1:exon:18244;Parent=Msa0860630-mRNA-1
chr5_4 exon 59473541 59473577 59473541 ID=Msa0860630-mRNA-1:exon:18243;Parent=Msa0860630-mRNA-1
chr5_4 exon 59474545 59474921 59474545 ID=Msa0860630-mRNA-1:exon:18242;Parent=Msa0860630-mRNA-1
chr5_4 five_prime_UTR 59474857 59474921 59474857 ID=Msa0860630-mRNA-1:five_prime_utr;Parent=Msa0860630-mRNA-1
chr5_4 CDS 59474545 59474856 59474545 ID=Msa0860630-mRNA-1:cds;Parent=Msa0860630-mRNA-1
chr5_4 CDS 59473541 59473577 59473541 ID=Msa0860630-mRNA-1:cds;Parent=Msa0860630-mRNA-1
chr5_4 CDS 59472608 59472675 59472608 ID=Msa0860630-mRNA-1:cds;Parent=Msa0860630-mRNA-1
chr5_4 CDS 59472133 59472192 59472133 ID=Msa0860630-mRNA-1:cds;Parent=Msa0860630-mRNA-1
chr5_4 three_prime_UTR 59471855 59472132 59471855 ID=Msa0860630-mRNA-1:three_prime_utr;Parent=Msa0860630-mRNA-1
Gene Sequence

>Msa0860630

ATGGCCACGCTTTTTCACTGCACTCTTCATCCTCTATCTTCTTCTTCTTCAAGCTCCATTCATCTTTCTTCTTCTCCTTGTTCTTCTACATCTTCTCTTACACTTCCACAACCTTCTTCTTCATCCAAGTTCTACTTCCAATCCTCCAAATGCAGACGAAAACCAACAAAATCCAGATTCTTGATGATCATGGACCCCATTTTGCTGTTTAATGGCTTAGGTAGTAGTGCTTTCTATATTGATACACAAACACTTCTTGCTACTGTTAGTGTTTTGGCTGCCATTGCTCTTTCTCTCTTCCTTGGCTTCAAGGGTGATCCGGTGTCCTGTGAGCGATGTGGTGGCAACGGTGGAACAAAATGTGTTTTTTGCAACAACGGCAAGATGAAAAAAGAGACGGGGTTGGTTGACTGCAAAGATTGGTACTCTGCAAGAAATGTGCAGGTTCTGGCTATTCCCGAAGATTATGAGCTTTGA

Protein sequence

>Msa0860630

MATLFHCTLHPLSSSSSSSIHLSSSPCSSTSSLTLPQPSSSSKFYFQSSKCRRKPTKSRFLMIMDPILLFNGLGSSAFYIDTQTLLATVSVLAAIALSLFLGFKGDPVSCERCGGNGGTKCVFCNNGKMKKETGLVDCKDWYSARNVQVLAIPEDYEL*