Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405620 | XP_003599800.1 | 96.602 | 412 | 11 | 2 | 1 | 411 | 3 | 412 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405620 | sp|Q680C0|GDL62_ARATH | 27.778 | 360 | 226 | 9 | 39 | 382 | 9 | 350 | 8.11e-44 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405620 | G7IXG5 | 96.602 | 412 | 11 | 2 | 1 | 411 | 3 | 412 | 0.0 | 820 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0405620 | 0.801383 | 9.239839e-49 | -8.615850e-47 |
| Msa0016040 | Msa0405620 | 0.862589 | 4.552852e-64 | -8.615850e-47 |
| Msa0019930 | Msa0405620 | 0.812563 | 3.981473e-51 | -8.615850e-47 |
| Msa0020540 | Msa0405620 | 0.828034 | 1.125137e-54 | -8.615850e-47 |
| Msa0025160 | Msa0405620 | 0.806317 | 8.721389e-50 | -8.615850e-47 |
| Msa0032980 | Msa0405620 | 0.838633 | 2.561522e-57 | -8.615850e-47 |
| Msa0048510 | Msa0405620 | 0.805771 | 1.136506e-49 | -8.615850e-47 |
| Msa0053070 | Msa0405620 | 0.801461 | 8.907856e-49 | -8.615850e-47 |
| Msa0056180 | Msa0405620 | 0.800915 | 1.151833e-48 | -8.615850e-47 |
| Msa0062340 | Msa0405620 | 0.839496 | 1.530746e-57 | -8.615850e-47 |
| Msa0067060 | Msa0405620 | 0.824262 | 8.878889e-54 | -8.615850e-47 |
| Msa0067380 | Msa0405620 | 0.821402 | 4.115301e-53 | -8.615850e-47 |
| Msa0068150 | Msa0405620 | 0.817530 | 3.143503e-52 | -8.615850e-47 |
| Msa0074360 | Msa0405620 | 0.815480 | 9.047722e-52 | -8.615850e-47 |
| Msa0075530 | Msa0405620 | 0.810813 | 9.564758e-51 | -8.615850e-47 |
| Msa0077560 | Msa0405620 | 0.840489 | 8.433807e-58 | -8.615850e-47 |
| Msa0078130 | Msa0405620 | 0.808561 | 2.915202e-50 | -8.615850e-47 |
| Msa0091350 | Msa0405620 | 0.827070 | 1.916600e-54 | -8.615850e-47 |
| Msa0091360 | Msa0405620 | 0.822785 | 1.967139e-53 | -8.615850e-47 |
| Msa0110200 | Msa0405620 | 0.810194 | 1.301182e-50 | -8.615850e-47 |
| Msa0121330 | Msa0405620 | 0.809781 | 1.597037e-50 | -8.615850e-47 |
| Msa0122330 | Msa0405620 | 0.839277 | 1.745036e-57 | -8.615850e-47 |
| Msa0123070 | Msa0405620 | 0.810179 | 1.311236e-50 | -8.615850e-47 |
| Msa0140200 | Msa0405620 | 0.805393 | 1.364195e-49 | -8.615850e-47 |
| Msa0140380 | Msa0405620 | 0.848379 | 6.365220e-60 | -8.615850e-47 |
| Msa0141640 | Msa0405620 | 0.815579 | 8.601105e-52 | -8.615850e-47 |
| Msa0143670 | Msa0405620 | 0.819085 | 1.397337e-52 | -8.615850e-47 |
| Msa0159590 | Msa0405620 | 0.840170 | 1.021537e-57 | -8.615850e-47 |
| Msa0159620 | Msa0405620 | 0.834875 | 2.326774e-56 | -8.615850e-47 |
| Msa0165830 | Msa0405620 | 0.804762 | 1.848398e-49 | -8.615850e-47 |
| Msa0170070 | Msa0405620 | 0.802072 | 6.673975e-49 | -8.615850e-47 |
| Msa0190570 | Msa0405620 | 0.801989 | 6.939145e-49 | -8.615850e-47 |
| Msa0190730 | Msa0405620 | 0.812732 | 3.656901e-51 | -8.615850e-47 |
| Msa0194630 | Msa0405620 | 0.802226 | 6.203274e-49 | -8.615850e-47 |
| Msa0200050 | Msa0405620 | 0.818672 | 1.734456e-52 | -8.615850e-47 |
| Msa0213030 | Msa0405620 | 0.801347 | 9.399329e-49 | -8.615850e-47 |
| Msa0232760 | Msa0405620 | 0.839797 | 1.278116e-57 | -8.615850e-47 |
| Msa0233020 | Msa0405620 | 0.801926 | 7.150790e-49 | -8.615850e-47 |
| Msa0367150 | Msa0405620 | 0.823702 | 1.201330e-53 | -8.615850e-47 |
| Msa0373500 | Msa0405620 | 0.842349 | 2.731016e-58 | -8.615850e-47 |
| Msa0383000 | Msa0405620 | 0.860337 | 2.216068e-63 | -8.615850e-47 |
| Msa0405620 | Msa0416160 | 0.815877 | 7.379371e-52 | -8.615850e-47 |
| Msa0405620 | Msa0421130 | 0.801950 | 7.069499e-49 | -8.615850e-47 |
| Msa0405620 | Msa0422050 | 0.812756 | 3.612254e-51 | -8.615850e-47 |
| Msa0405620 | Msa0432010 | 0.821074 | 4.899284e-53 | -8.615850e-47 |
| Msa0405620 | Msa0433150 | 0.851772 | 7.136993e-61 | -8.615850e-47 |
| Msa0405620 | Msa0433760 | 0.819119 | 1.372887e-52 | -8.615850e-47 |
| Msa0405620 | Msa0436330 | 0.803536 | 3.326851e-49 | -8.615850e-47 |
| Msa0405620 | Msa0447750 | 0.806390 | 8.421575e-50 | -8.615850e-47 |
| Msa0405620 | Msa0459740 | 0.803733 | 3.028504e-49 | -8.615850e-47 |
| Msa0405620 | Msa0462780 | 0.801391 | 9.204092e-49 | -8.615850e-47 |
| Msa0405620 | Msa0466520 | 0.820307 | 7.351243e-53 | -8.615850e-47 |
| Msa0405620 | Msa0466880 | 0.810211 | 1.290548e-50 | -8.615850e-47 |
| Msa0405620 | Msa0468620 | 0.822700 | 2.058491e-53 | -8.615850e-47 |
| Msa0405620 | Msa0468700 | 0.821843 | 3.255190e-53 | -8.615850e-47 |
| Msa0405620 | Msa0477630 | 0.816170 | 6.348390e-52 | -8.615850e-47 |
| Msa0405620 | Msa0481890 | 0.835751 | 1.397901e-56 | -8.615850e-47 |
| Msa0405620 | Msa0498550 | 0.809853 | 1.541131e-50 | -8.615850e-47 |
| Msa0405620 | Msa0513080 | 0.826458 | 2.682832e-54 | -8.615850e-47 |
| Msa0405620 | Msa0514500 | 0.824122 | 9.578481e-54 | -8.615850e-47 |
| Msa0405620 | Msa0514580 | 0.813862 | 2.065095e-51 | -8.615850e-47 |
| Msa0405620 | Msa0520870 | 0.813471 | 2.517179e-51 | -8.615850e-47 |
| Msa0405620 | Msa0521680 | 0.846958 | 1.565925e-59 | -8.615850e-47 |
| Msa0405620 | Msa0524520 | 0.830232 | 3.298393e-55 | -8.615850e-47 |
| Msa0405620 | Msa0531960 | 0.856946 | 2.281215e-62 | -8.615850e-47 |
| Msa0405620 | Msa0534100 | 0.804699 | 1.905656e-49 | -8.615850e-47 |
| Msa0405620 | Msa0554300 | 0.808645 | 2.797369e-50 | -8.615850e-47 |
| Msa0405620 | Msa0561560 | 0.811149 | 8.088030e-51 | -8.615850e-47 |
| Msa0405620 | Msa0563900 | 0.817901 | 2.593331e-52 | -8.615850e-47 |
| Msa0405620 | Msa0567170 | 0.803881 | 2.820871e-49 | -8.615850e-47 |
| Msa0405620 | Msa0577280 | 0.804087 | 2.556226e-49 | -8.615850e-47 |
| Msa0405620 | Msa0577330 | 0.803078 | 4.138086e-49 | -8.615850e-47 |
| Msa0405620 | Msa0580810 | 0.838043 | 3.634373e-57 | -8.615850e-47 |
| Msa0405620 | Msa0588920 | 0.812598 | 3.912189e-51 | -8.615850e-47 |
| Msa0405620 | Msa0590200 | 0.825623 | 4.237057e-54 | -8.615850e-47 |
| Msa0405620 | Msa0606100 | 0.801286 | 9.673943e-49 | -8.615850e-47 |
| Msa0405620 | Msa0607800 | 0.832351 | 9.932179e-56 | -8.615850e-47 |
| Msa0405620 | Msa0613630 | 0.809104 | 2.231861e-50 | -8.615850e-47 |
| Msa0405620 | Msa0620500 | 0.811766 | 5.940291e-51 | -8.615850e-47 |
| Msa0405620 | Msa0621710 | 0.855862 | 4.743867e-62 | -8.615850e-47 |
| Msa0405620 | Msa0622920 | 0.800493 | 1.404410e-48 | -8.615850e-47 |
| Msa0405620 | Msa0625620 | 0.807044 | 6.124755e-50 | -8.615850e-47 |
| Msa0405620 | Msa0647050 | 0.804340 | 2.264643e-49 | -8.615850e-47 |
| Msa0405620 | Msa0648040 | 0.821536 | 3.833443e-53 | -8.615850e-47 |
| Msa0405620 | Msa0648760 | 0.810909 | 9.115430e-51 | -8.615850e-47 |
| Msa0405620 | Msa0657700 | 0.813033 | 3.140904e-51 | -8.615850e-47 |
| Msa0405620 | Msa0666700 | 0.835298 | 1.820761e-56 | -8.615850e-47 |
| Msa0405620 | Msa0668900 | 0.832473 | 9.265350e-56 | -8.615850e-47 |
| Msa0405620 | Msa0687090 | 0.808682 | 2.746983e-50 | -8.615850e-47 |
| Msa0405620 | Msa0690740 | 0.820780 | 5.724399e-53 | -8.615850e-47 |
| Msa0405620 | Msa0698730 | 0.813615 | 2.339893e-51 | -8.615850e-47 |
| Msa0405620 | Msa0702810 | 0.810092 | 1.368878e-50 | -8.615850e-47 |
| Msa0405620 | Msa0703600 | 0.807335 | 5.315638e-50 | -8.615850e-47 |
| Msa0405620 | Msa0709200 | 0.809330 | 1.996080e-50 | -8.615850e-47 |
| Msa0405620 | Msa0709440 | 0.836923 | 7.037499e-57 | -8.615850e-47 |
| Msa0405620 | Msa0709630 | 0.809420 | 1.909059e-50 | -8.615850e-47 |
| Msa0405620 | Msa0714520 | 0.816408 | 5.617283e-52 | -8.615850e-47 |
| Msa0405620 | Msa0714790 | 0.805489 | 1.302638e-49 | -8.615850e-47 |
| Msa0405620 | Msa0716480 | 0.823449 | 1.377162e-53 | -8.615850e-47 |
| Msa0405620 | Msa0717900 | 0.828226 | 1.011549e-54 | -8.615850e-47 |
| Msa0405620 | Msa0722220 | 0.818190 | 2.230611e-52 | -8.615850e-47 |
| Msa0405620 | Msa0735780 | 0.810937 | 8.989136e-51 | -8.615850e-47 |
| Msa0405620 | Msa0740710 | 0.832370 | 9.826625e-56 | -8.615850e-47 |
| Msa0405620 | Msa0743440 | 0.808523 | 2.970567e-50 | -8.615850e-47 |
| Msa0405620 | Msa0745720 | 0.814455 | 1.527656e-51 | -8.615850e-47 |
| Msa0405620 | Msa0747740 | 0.806142 | 9.496978e-50 | -8.615850e-47 |
| Msa0405620 | Msa0756820 | 0.806842 | 6.759510e-50 | -8.615850e-47 |
| Msa0405620 | Msa0773630 | 0.833679 | 4.642076e-56 | -8.615850e-47 |
| Msa0405620 | Msa0778600 | 0.810901 | 9.153155e-51 | -8.615850e-47 |
| Msa0405620 | Msa0780910 | 0.860867 | 1.530832e-63 | -8.615850e-47 |
| Msa0405620 | Msa0805680 | 0.804666 | 1.935831e-49 | -8.615850e-47 |
| Msa0405620 | Msa0811020 | 0.833851 | 4.204940e-56 | -8.615850e-47 |
| Msa0405620 | Msa0816080 | 0.817942 | 2.538337e-52 | -8.615850e-47 |
| Msa0405620 | Msa0821160 | 0.844361 | 7.931371e-59 | -8.615850e-47 |
| Msa0405620 | Msa0828970 | 0.814158 | 1.776548e-51 | -8.615850e-47 |
| Msa0405620 | Msa0837460 | 0.826591 | 2.494650e-54 | -8.615850e-47 |
| Msa0405620 | Msa0855230 | 0.800036 | 1.739682e-48 | -8.615850e-47 |
| Msa0405620 | Msa0863620 | 0.827737 | 1.325801e-54 | -8.615850e-47 |
| Msa0405620 | Msa0867110 | 0.810799 | 9.633400e-51 | -8.615850e-47 |
| Msa0405620 | Msa0879920 | 0.818649 | 1.755500e-52 | -8.615850e-47 |
| Msa0405620 | Msa0888790 | 0.806300 | 8.794297e-50 | -8.615850e-47 |
| Msa0405620 | Msa0900760 | 0.800886 | 1.167996e-48 | -8.615850e-47 |
| Msa0405620 | Msa0909760 | 0.809634 | 1.717217e-50 | -8.615850e-47 |
| Msa0405620 | Msa0915520 | 0.812422 | 4.273726e-51 | -8.615850e-47 |
| Msa0405620 | Msa0931590 | 0.852040 | 5.993132e-61 | -8.615850e-47 |
| Msa0405620 | Msa0989370 | 0.815650 | 8.290456e-52 | -8.615850e-47 |
| Msa0405620 | Msa1002640 | 0.811995 | 5.295672e-51 | -8.615850e-47 |
| Msa0405620 | Msa1008670 | 0.800093 | 1.694365e-48 | -8.615850e-47 |
| Msa0405620 | Msa1033920 | 0.802555 | 5.307738e-49 | -8.615850e-47 |
| Msa0405620 | Msa1035570 | 0.830710 | 2.519428e-55 | -8.615850e-47 |
| Msa0405620 | Msa1035610 | 0.814036 | 1.889724e-51 | -8.615850e-47 |
| Msa0405620 | Msa1035650 | 0.813632 | 2.320024e-51 | -8.615850e-47 |
| Msa0405620 | Msa1082200 | 0.800949 | 1.133384e-48 | -8.615850e-47 |
| Msa0405620 | Msa1082380 | 0.812168 | 4.855225e-51 | -8.615850e-47 |
| Msa0405620 | Msa1084530 | 0.839512 | 1.516358e-57 | -8.615850e-47 |
| Msa0405620 | Msa1116190 | 0.824728 | 6.896779e-54 | -8.615850e-47 |
| Msa0405620 | Msa1116660 | 0.805599 | 1.234827e-49 | -8.615850e-47 |
| Msa0405620 | Msa1116740 | 0.802512 | 5.415890e-49 | -8.615850e-47 |
| Msa0405620 | Msa1125820 | 0.838898 | 2.187000e-57 | -8.615850e-47 |
| Msa0405620 | Msa1125990 | 0.837875 | 4.014580e-57 | -8.615850e-47 |
| Msa0405620 | Msa1127280 | 0.811231 | 7.763949e-51 | -8.615850e-47 |
| Msa0405620 | Msa1127470 | 0.809243 | 2.082988e-50 | -8.615850e-47 |
| Msa0405620 | Msa1132530 | 0.807898 | 4.036112e-50 | -8.615850e-47 |
| Msa0405620 | Msa1148630 | 0.813340 | 2.690213e-51 | -8.615850e-47 |
| Msa0405620 | Msa1154100 | 0.806726 | 7.149813e-50 | -8.615850e-47 |
| Msa0405620 | Msa1159590 | 0.820223 | 7.684233e-53 | -8.615850e-47 |
| Msa0405620 | Msa1162880 | 0.815594 | 8.533292e-52 | -8.615850e-47 |
| Msa0405620 | Msa1165480 | 0.809543 | 1.796833e-50 | -8.615850e-47 |
| Msa0405620 | Msa1171290 | 0.833308 | 5.747029e-56 | -8.615850e-47 |
| Msa0405620 | Msa1188790 | 0.820637 | 6.175287e-53 | -8.615850e-47 |
| Msa0405620 | Msa1190390 | 0.806947 | 6.421938e-50 | -8.615850e-47 |
| Msa0405620 | Msa1201780 | 0.810801 | 9.620791e-51 | -8.615850e-47 |
| Msa0405620 | Msa1211640 | 0.800085 | 1.700789e-48 | -8.615850e-47 |
| Msa0405620 | Msa1213830 | 0.814306 | 1.647397e-51 | -8.615850e-47 |
| Msa0405620 | Msa1214350 | 0.819393 | 1.189130e-52 | -8.615850e-47 |
| Msa0405620 | Msa1215980 | 0.811915 | 5.513405e-51 | -8.615850e-47 |
| Msa0405620 | Msa1218820 | 0.835634 | 1.497127e-56 | -8.615850e-47 |
| Msa0405620 | Msa1254420 | 0.812873 | 3.405059e-51 | -8.615850e-47 |
| Msa0405620 | Msa1254540 | 0.854212 | 1.430937e-61 | -8.615850e-47 |
| Msa0405620 | Msa1263740 | 0.840432 | 8.726569e-58 | -8.615850e-47 |
| Msa0405620 | Msa1263780 | 0.844115 | 9.234514e-59 | -8.615850e-47 |
| Msa0405620 | Msa1263900 | 0.800223 | 1.594030e-48 | -8.615850e-47 |
| Msa0405620 | Msa1294460 | 0.832912 | 7.208902e-56 | -8.615850e-47 |
| Msa0405620 | Msa1294790 | 0.825679 | 4.110390e-54 | -8.615850e-47 |
| Msa0405620 | Msa1300460 | 0.805182 | 1.510416e-49 | -8.615850e-47 |
| Msa0405620 | Msa1306790 | 0.805559 | 1.259159e-49 | -8.615850e-47 |
| Msa0405620 | Msa1332950 | 0.822585 | 2.189486e-53 | -8.615850e-47 |
| Msa0405620 | Msa1338210 | 0.817040 | 4.052123e-52 | -8.615850e-47 |
| Msa0405620 | Msa1343180 | 0.818287 | 2.120546e-52 | -8.615850e-47 |
| Msa0405620 | Msa1359980 | 0.806028 | 1.003300e-49 | -8.615850e-47 |
| Msa0405620 | Msa1362130 | 0.809577 | 1.766905e-50 | -8.615850e-47 |
| Msa0405620 | Msa1364040 | 0.812885 | 3.384034e-51 | -8.615850e-47 |
| Msa0405620 | Msa1364410 | 0.830801 | 2.392635e-55 | -8.615850e-47 |
| Msa0405620 | Msa1366150 | 0.828823 | 7.256931e-55 | -8.615850e-47 |
| Msa0405620 | Msa1368750 | 0.820520 | 6.568211e-53 | -8.615850e-47 |
| Msa0405620 | Msa1374790 | 0.820966 | 5.187327e-53 | -8.615850e-47 |
| Msa0405620 | Msa1381470 | 0.840324 | 9.313054e-58 | -8.615850e-47 |
| Msa0405620 | Msa1384150 | 0.832480 | 9.231061e-56 | -8.615850e-47 |
| Msa0405620 | Msa1387440 | 0.851983 | 6.218111e-61 | -8.615850e-47 |
| Msa0405620 | Msa1387500 | 0.825800 | 3.847179e-54 | -8.615850e-47 |
| Msa0405620 | Msa1406720 | 0.832848 | 7.479410e-56 | -8.615850e-47 |
| Msa0405620 | Msa1409410 | 0.823109 | 1.653401e-53 | -8.615850e-47 |
| Msa0405620 | Msa1429070 | 0.816752 | 4.703857e-52 | -8.615850e-47 |
| Msa0405620 | Msa1445120 | 0.821209 | 4.558726e-53 | -8.615850e-47 |
| Msa0405620 | Msa1450190 | 0.863359 | 2.634623e-64 | -8.615850e-47 |
| Msa0405620 | Msa1451820 | 0.822301 | 2.548444e-53 | -8.615850e-47 |
| Msa0405620 | Msa1454010 | 0.810130 | 1.343139e-50 | -8.615850e-47 |
| Msa0405620 | Msa1465360 | 0.819285 | 1.258574e-52 | -8.615850e-47 |
| Msa0269210 | Msa0405620 | 0.830504 | 2.829132e-55 | -8.615850e-47 |
| Msa0272260 | Msa0405620 | 0.814982 | 1.167385e-51 | -8.615850e-47 |
| Msa0343010 | Msa0405620 | 0.811413 | 7.090591e-51 | -8.615850e-47 |
| Msa0358680 | Msa0405620 | 0.898005 | 8.100767e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405620 | MtrunA17_Chr3g0096121 | 96.602 | 412 | 11 | 2 | 1 | 411 | 3 | 412 | 0.0 | 820 |
| Msa0405620 | MtrunA17_Chr5g0442991 | 72.011 | 368 | 82 | 6 | 35 | 393 | 13 | 368 | 0.0 | 536 |
| Msa0405620 | MtrunA17_Chr5g0443021 | 58.242 | 364 | 133 | 6 | 42 | 394 | 16 | 371 | 1.11e-136 | 400 |
| Msa0405620 | MtrunA17_Chr5g0443011 | 55.137 | 292 | 112 | 7 | 102 | 383 | 7 | 289 | 2.32e-99 | 298 |
| Msa0405620 | MtrunA17_Chr8g0388281 | 33.241 | 361 | 202 | 8 | 38 | 382 | 7 | 344 | 6.46e-58 | 192 |
| Msa0405620 | MtrunA17_Chr5g0396551 | 33.611 | 360 | 194 | 9 | 39 | 379 | 8 | 341 | 3.35e-51 | 175 |
| Msa0405620 | MtrunA17_Chr5g0410331 | 30.220 | 364 | 203 | 7 | 38 | 379 | 7 | 341 | 3.16e-47 | 165 |
| Msa0405620 | MtrunA17_Chr5g0443031 | 44.516 | 155 | 61 | 6 | 245 | 393 | 3 | 138 | 2.77e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405620 | AT5G50890.1 | 68.984 | 374 | 104 | 5 | 29 | 393 | 36 | 406 | 0.0 | 529 |
| Msa0405620 | AT2G05260.1 | 29.700 | 367 | 219 | 10 | 39 | 382 | 8 | 358 | 2.64e-47 | 166 |
| Msa0405620 | AT5G24230.1 | 30.239 | 377 | 216 | 9 | 16 | 368 | 1 | 354 | 5.19e-47 | 165 |
| Msa0405620 | AT5G24230.3 | 30.239 | 377 | 216 | 9 | 16 | 368 | 1 | 354 | 5.19e-47 | 165 |
| Msa0405620 | AT5G24230.2 | 30.239 | 377 | 216 | 9 | 16 | 368 | 1 | 354 | 5.19e-47 | 165 |
| Msa0405620 | AT4G10955.2 | 27.778 | 360 | 226 | 9 | 39 | 382 | 9 | 350 | 8.24e-45 | 159 |
| Msa0405620 | AT4G10955.1 | 27.778 | 360 | 226 | 9 | 39 | 382 | 9 | 350 | 8.24e-45 | 159 |
| Msa0405620 | AT2G05260.2 | 31.522 | 276 | 173 | 5 | 39 | 314 | 8 | 267 | 1.22e-43 | 154 |
| Msa0405620 | AT5G24220.1 | 27.577 | 359 | 213 | 8 | 38 | 376 | 24 | 355 | 1.29e-41 | 151 |
| Msa0405620 | AT5G24180.1 | 28.150 | 373 | 214 | 10 | 28 | 376 | 12 | 354 | 2.89e-39 | 145 |
| Msa0405620 | AT5G24200.2 | 28.571 | 357 | 195 | 9 | 39 | 368 | 8 | 331 | 8.35e-33 | 126 |
| Msa0405620 | AT5G24200.3 | 28.571 | 357 | 195 | 9 | 39 | 368 | 8 | 331 | 8.35e-33 | 126 |
| Msa0405620 | AT5G24200.1 | 28.571 | 357 | 195 | 9 | 39 | 368 | 8 | 331 | 8.35e-33 | 126 |
| Msa0405620 | AT5G24210.2 | 28.451 | 355 | 197 | 13 | 42 | 370 | 16 | 339 | 4.64e-26 | 108 |
| Msa0405620 | AT5G24210.3 | 28.451 | 355 | 197 | 13 | 42 | 370 | 16 | 339 | 4.64e-26 | 108 |
| Msa0405620 | AT5G24210.1 | 28.451 | 355 | 197 | 13 | 42 | 370 | 16 | 339 | 4.64e-26 | 108 |
| Msa0405620 | AT5G24190.1 | 23.967 | 242 | 143 | 5 | 162 | 376 | 3 | 230 | 9.77e-16 | 77.0 |
Find 80 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTTGGTTAATCTTAAT+TGG | 0.166949 | 3_2:+40706143 | Msa0405620:CDS |
| ACATGACAACCATTATTATT+TGG | 0.185396 | 3_2:-40708912 | None:intergenic |
| AGCTTGAAGAATCATAATTT+TGG | 0.238345 | 3_2:+40708762 | Msa0405620:CDS |
| TCTTTCTCATTTGATCTATC+AGG | 0.253369 | 3_2:-40708855 | None:intergenic |
| CTTAGTGCTAAAACGGCTTT+TGG | 0.287219 | 3_2:-40708330 | None:intergenic |
| CGTGTCTGGTCCAAGGAATT+TGG | 0.289105 | 3_2:+40706129 | Msa0405620:CDS |
| ATGACAGTTCTCTTGTAGTT+TGG | 0.302940 | 3_2:-40708090 | None:intergenic |
| AAAGGTGTTTGTTGTGAATA+AGG | 0.307684 | 3_2:+40708941 | Msa0405620:CDS |
| CTCGCTTGGGAAAGCCTAAA+AGG | 0.308656 | 3_2:+40708411 | Msa0405620:CDS |
| TTGAAGGGAATCCACCAATT+TGG | 0.321746 | 3_2:-40708189 | None:intergenic |
| TGTTGTTGTTGTTAAGGTTT+CGG | 0.329270 | 3_2:-40705988 | None:intergenic |
| TGTGTAGCAGGAAATTCATT+AGG | 0.360995 | 3_2:+40708504 | Msa0405620:CDS |
| TGTTCATGTTGTTGTTGTTA+AGG | 0.374936 | 3_2:-40705994 | None:intergenic |
| TAATTCTTCTCAAGTATTGC+AGG | 0.375963 | 3_2:+40709100 | Msa0405620:CDS |
| AGGTATCAACACAAGCAAAT+AGG | 0.380464 | 3_2:-40709183 | None:intergenic |
| AAAATGCTCTAGCTCCAAAT+TGG | 0.383483 | 3_2:+40708175 | Msa0405620:CDS |
| CAGCTTAAATCTTTGTATAC+AGG | 0.386722 | 3_2:+40709062 | Msa0405620:CDS |
| TAATAAGGTCTTGCTCTCAT+TGG | 0.387838 | 3_2:+40709137 | Msa0405620:exon |
| ATGACCTTCGGTTCCTCGCT+TGG | 0.396243 | 3_2:+40708397 | Msa0405620:CDS |
| GGAAGAAGAAGTAAAAGAAC+TGG | 0.403485 | 3_2:+40706036 | Msa0405620:CDS |
| CCTTATGCATTTCACGTGTC+TGG | 0.403890 | 3_2:+40706115 | Msa0405620:CDS |
| AAAAGAACTGGAAGAGGAAA+AGG | 0.409815 | 3_2:+40706048 | Msa0405620:CDS |
| TCAACTCCTTCGCTGCTTGA+AGG | 0.414457 | 3_2:-40708684 | None:intergenic |
| TGACCTTCGGTTCCTCGCTT+GGG | 0.418160 | 3_2:+40708398 | Msa0405620:CDS |
| AGTAGCAATGTTTGTGTAGC+AGG | 0.421432 | 3_2:+40708492 | Msa0405620:CDS |
| GGAAAGGCTAGTAAATAATA+AGG | 0.423775 | 3_2:+40709122 | Msa0405620:exon |
| TTAAGATTAACCAAATTCCT+TGG | 0.425756 | 3_2:-40706139 | None:intergenic |
| TGTTCCTCTTAGTGCTAAAA+CGG | 0.439379 | 3_2:-40708337 | None:intergenic |
| AAATCAGTGTCTGATGCATA+TGG | 0.439991 | 3_2:+40708468 | Msa0405620:CDS |
| TGGTCTGATCAGTACTAAAT+CGG | 0.441069 | 3_2:-40708298 | None:intergenic |
| AGAAGTAAAAGAACTGGAAG+AGG | 0.451551 | 3_2:+40706042 | Msa0405620:CDS |
| GTTGAAAAGCAAGGAGAAGA+AGG | 0.452574 | 3_2:+40706079 | Msa0405620:CDS |
| CGAGGAACCGAAGGTCATCT+TGG | 0.457144 | 3_2:-40708392 | None:intergenic |
| CAGAAGTTTCATGAAGCTCA+TGG | 0.477562 | 3_2:+40708969 | Msa0405620:CDS |
| AATGTCGGTCCAAATAATAA+TGG | 0.479362 | 3_2:+40708903 | Msa0405620:CDS |
| TTTCGGTGCAATACTCGAAT+GGG | 0.486400 | 3_2:+40708257 | Msa0405620:CDS |
| TTTGTTAGCTTGTACTTGAA+GGG | 0.500967 | 3_2:-40708204 | None:intergenic |
| GCAGGAAATTCATTAGGAGC+TGG | 0.501836 | 3_2:+40708510 | Msa0405620:CDS |
| TATACAGGTGGTAGTGGTAG+TGG | 0.501866 | 3_2:+40709077 | Msa0405620:CDS |
| GAAACAACAACAAGAAGAGT+TGG | 0.503495 | 3_2:+40708724 | Msa0405620:CDS |
| ATGCTCTAGCTCCAAATTGG+TGG | 0.515850 | 3_2:+40708178 | Msa0405620:CDS |
| ATTGTGTTTGAAATCTGAAG+AGG | 0.516069 | 3_2:-40705936 | None:intergenic |
| GAGATCTCATTAGTTCTAGC+TGG | 0.517088 | 3_2:+40706167 | Msa0405620:CDS |
| GGAAAATCGTTAGCAAAAGA+AGG | 0.524713 | 3_2:+40708549 | Msa0405620:CDS |
| CCAGACACGTGAAATGCATA+AGG | 0.536683 | 3_2:-40706115 | None:intergenic |
| TTCTCAAGTATTGCAGGGAA+AGG | 0.542324 | 3_2:+40709106 | Msa0405620:CDS |
| TCTTTGTATACAGGTGGTAG+TGG | 0.544485 | 3_2:+40709071 | Msa0405620:CDS |
| AAAGCCTAAAAGGTTCTGTA+AGG | 0.545305 | 3_2:+40708421 | Msa0405620:CDS |
| GAGACATCCAAGATGACCTT+CGG | 0.546318 | 3_2:+40708385 | Msa0405620:CDS |
| AGAGGAAAGAGCGGAAGTGA+AGG | 0.546716 | 3_2:-40705918 | None:intergenic |
| GGATGTCTCTTCGCATTGTG+TGG | 0.558898 | 3_2:-40708371 | None:intergenic |
| GTTGTTGTGGTTGAAAAGCA+AGG | 0.564724 | 3_2:+40706070 | Msa0405620:CDS |
| GATTCTCTTCCAAGCTAACT+CGG | 0.565024 | 3_2:-40708649 | None:intergenic |
| AATTCTTCTCAAGTATTGCA+GGG | 0.565859 | 3_2:+40709101 | Msa0405620:CDS |
| GCTATGAGTCTAAGAAACAT+TGG | 0.572525 | 3_2:+40708618 | Msa0405620:CDS |
| CATTTCACGTGTCTGGTCCA+AGG | 0.574642 | 3_2:+40706122 | Msa0405620:CDS |
| ACAAGAAGAGTTGGATGCCA+TGG | 0.575559 | 3_2:+40708733 | Msa0405620:CDS |
| GATAATAACAAGGAGAATGT+CGG | 0.586582 | 3_2:+40708888 | Msa0405620:CDS |
| CTCATAGCAATTGAAACAGA+AGG | 0.596681 | 3_2:-40708603 | None:intergenic |
| ATGCTTCCTTCAAGCAGCGA+AGG | 0.596900 | 3_2:+40708678 | Msa0405620:CDS |
| TTTCCCAAGCGAGGAACCGA+AGG | 0.599086 | 3_2:-40708401 | None:intergenic |
| CTTAAATCTTTGTATACAGG+TGG | 0.607222 | 3_2:+40709065 | Msa0405620:CDS |
| TGGTTGTCATGTTGCTGCAA+AGG | 0.611656 | 3_2:+40708923 | Msa0405620:CDS |
| AGATCAAATGAGAAAGATGA+TGG | 0.614254 | 3_2:+40708861 | Msa0405620:CDS |
| TAACAACAACAACATGAACA+TGG | 0.616480 | 3_2:+40705997 | Msa0405620:exon |
| CATGGAAATCACAACAACAA+AGG | 0.617239 | 3_2:+40706015 | Msa0405620:CDS |
| GTTGATAATATCAACAACGA+TGG | 0.618756 | 3_2:+40708702 | Msa0405620:CDS |
| TAGCAATTGAAACAGAAGGC+GGG | 0.620328 | 3_2:-40708599 | None:intergenic |
| CTCATGGAATTGAACAATGG+TGG | 0.620564 | 3_2:+40708985 | Msa0405620:CDS |
| TGATGGTGGTGATAATAACA+AGG | 0.621372 | 3_2:+40708878 | Msa0405620:CDS |
| AACGAAGCTACTTCCCACAA+AGG | 0.631032 | 3_2:+40705879 | None:intergenic |
| GAAATCTGAAGAGGAAAGAG+CGG | 0.643468 | 3_2:-40705927 | None:intergenic |
| TTCTTCAAGCTAGTTAACCA+TGG | 0.647087 | 3_2:-40708750 | None:intergenic |
| GGAAGAGGAAAAGGTTGTTG+TGG | 0.677635 | 3_2:+40706057 | Msa0405620:CDS |
| CTATTGTTCACATAGAGATG+AGG | 0.677824 | 3_2:-40708801 | None:intergenic |
| ATAGCAATTGAAACAGAAGG+CGG | 0.679402 | 3_2:-40708600 | None:intergenic |
| TTAGTACTGATCAGACCAAG+TGG | 0.693039 | 3_2:+40708303 | Msa0405620:CDS |
| ACACTTATAGACGAAAGAGA+CGG | 0.699729 | 3_2:+40708228 | Msa0405620:CDS |
| TCAAATGAGAAAGATGATGG+TGG | 0.706323 | 3_2:+40708864 | Msa0405620:CDS |
| AAGCTCATGGAATTGAACAA+TGG | 0.723699 | 3_2:+40708982 | Msa0405620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAATTTTGAATTTAAATTT+AGG | + | chr3_2:40706435-40706454 | Msa0405620:intron | 10.0% |
| !!! | GAATTTTGAATTTAAATTTA+GGG | + | chr3_2:40706436-40706455 | Msa0405620:intron | 10.0% |
| !! | ATTAAGGAAATAAATAAATT+GGG | - | chr3_2:40706844-40706863 | None:intergenic | 10.0% |
| !! | AATTAAGGAAATAAATAAAT+TGG | - | chr3_2:40706845-40706864 | None:intergenic | 10.0% |
| !! | ATAATTTAAGAAAATTGAAA+TGG | + | chr3_2:40707105-40707124 | Msa0405620:intron | 10.0% |
| !! | TAATTTAAGAAAATTGAAAT+GGG | + | chr3_2:40707106-40707125 | Msa0405620:intron | 10.0% |
| !! | TTTATACATTTGTAATTTAT+TGG | + | chr3_2:40707313-40707332 | Msa0405620:intron | 10.0% |
| !! | TTTATACATTTGTAATTTAT+TGG | + | chr3_2:40707313-40707332 | Msa0405620:intron | 10.0% |
| !!! | CTTTCTTATTTTTATTTTTT+TGG | + | chr3_2:40709213-40709232 | Msa0405620:three_prime_UTR | 10.0% |
| !!! | ATTTGATTTGATGAAAATTT+TGG | + | chr3_2:40706222-40706241 | Msa0405620:intron | 15.0% |
| !!! | TTTTGAGTGAATTTAAAATT+TGG | + | chr3_2:40706280-40706299 | Msa0405620:intron | 15.0% |
| !!! | AAATTTGGTTTTATTTGAAA+TGG | + | chr3_2:40706295-40706314 | Msa0405620:intron | 15.0% |
| !!! | AATTTAAGTTAGTTTCTAAA+TGG | + | chr3_2:40706404-40706423 | Msa0405620:intron | 15.0% |
| !!! | ATTTAAGTTAGTTTCTAAAT+GGG | + | chr3_2:40706405-40706424 | Msa0405620:intron | 15.0% |
| !! | TTATTTACTCAAATTATTAG+CGG | - | chr3_2:40706639-40706658 | None:intergenic | 15.0% |
| !! | AATAAGTTACAATTGTATAA+AGG | - | chr3_2:40707849-40707868 | None:intergenic | 15.0% |
| !! | TTTATACAATTGTAACTTAT+TGG | + | chr3_2:40707848-40707867 | Msa0405620:intron | 15.0% |
| !! | AAAAATAAGAAAGTTAAACA+AGG | - | chr3_2:40709206-40709225 | None:intergenic | 15.0% |
| !!! | TTTTAGATTATTTCCTTTGT+GGG | - | chr3_2:40705895-40705914 | None:intergenic | 20.0% |
| !! | ACAAAAGCTACAAATAAAAA+GGG | - | chr3_2:40706199-40706218 | None:intergenic | 20.0% |
| !! | AACAAAAGCTACAAATAAAA+AGG | - | chr3_2:40706200-40706219 | None:intergenic | 20.0% |
| !!! | AAATTTTGGTTTTTGTTATG+TGG | + | chr3_2:40706236-40706255 | Msa0405620:intron | 20.0% |
| !!! | AATTTTGGTTTTTGTTATGT+GGG | + | chr3_2:40706237-40706256 | Msa0405620:intron | 20.0% |
| !!! | ATAATTTTTTGATGAGTTTC+TGG | + | chr3_2:40706740-40706759 | Msa0405620:intron | 20.0% |
| !!! | TTCCTTAATTGTTTTGTAAT+TGG | + | chr3_2:40706855-40706874 | Msa0405620:intron | 20.0% |
| !!! | TCCTTAATTGTTTTGTAATT+GGG | + | chr3_2:40706856-40706875 | Msa0405620:intron | 20.0% |
| !! | ATTCATATCAAAACTAAACA+GGG | - | chr3_2:40706943-40706962 | None:intergenic | 20.0% |
| !! | AATTCATATCAAAACTAAAC+AGG | - | chr3_2:40706944-40706963 | None:intergenic | 20.0% |
| !! | AAACTTAAATAATTGAATGC+TGG | - | chr3_2:40707284-40707303 | None:intergenic | 20.0% |
| !! | AAACATAAATAATTGAAAGC+TGG | - | chr3_2:40707532-40707551 | None:intergenic | 20.0% |
| !! | TTTATAATATTGTTTGAGAG+AGG | + | chr3_2:40707930-40707949 | Msa0405620:intron | 20.0% |
| !!! | ATTATATGAAGTTCTAGTAA+AGG | - | chr3_2:40708036-40708055 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTTTGGACAAGT+TGG | + | chr3_2:40709222-40709241 | Msa0405620:three_prime_UTR | 20.0% |
| !!! | GTTTTAGATTATTTCCTTTG+TGG | - | chr3_2:40705896-40705915 | None:intergenic | 25.0% |
| ! | TTAAGATTAACCAAATTCCT+TGG | - | chr3_2:40706142-40706161 | None:intergenic | 25.0% |
| ! | GGAATTTGGTTAATCTTAAT+TGG | + | chr3_2:40706143-40706162 | Msa0405620:CDS | 25.0% |
| ! | TTGGTGAAAATTTGAGAAAA+TGG | + | chr3_2:40706373-40706392 | Msa0405620:intron | 25.0% |
| ! | TGGTGAAAATTTGAGAAAAT+GGG | + | chr3_2:40706374-40706393 | Msa0405620:intron | 25.0% |
| !! | ATCCGTTTTCAGAAAATATT+GGG | + | chr3_2:40706488-40706507 | Msa0405620:intron | 25.0% |
| !!! | AACCCAATATTTTCTGAAAA+CGG | - | chr3_2:40706493-40706512 | None:intergenic | 25.0% |
| ! | AGCTTCATTAATTTAACTAC+AGG | + | chr3_2:40706796-40706815 | Msa0405620:intron | 25.0% |
| ! | ATTAATTTAACTACAGGCTT+TGG | + | chr3_2:40706802-40706821 | Msa0405620:intron | 25.0% |
| ! | TCCCAATTACAAAACAATTA+AGG | - | chr3_2:40706860-40706879 | None:intergenic | 25.0% |
| ! | GAGAAAATCCATGATATTAA+TGG | - | chr3_2:40706916-40706935 | None:intergenic | 25.0% |
| !!! | TAGCATAATTGAGTTGATTA+TGG | + | chr3_2:40707368-40707387 | Msa0405620:intron | 25.0% |
| !!! | TAGCATAATTGAGTTGATTA+TGG | + | chr3_2:40707368-40707387 | Msa0405620:intron | 25.0% |
| ! | ATATGAAAAATAGAAGACTC+TGG | - | chr3_2:40707690-40707709 | None:intergenic | 25.0% |
| ! | ACTGATAATACAGTCAAATA+AGG | - | chr3_2:40707904-40707923 | None:intergenic | 25.0% |
| ! | ATTTGACTGTATTATCAGTA+TGG | + | chr3_2:40707905-40707924 | Msa0405620:intron | 25.0% |
| ! | TTTGACTGTATTATCAGTAT+GGG | + | chr3_2:40707906-40707925 | Msa0405620:intron | 25.0% |
| ! | AGAACGAAAATGAAAAACTA+GGG | - | chr3_2:40707986-40708005 | None:intergenic | 25.0% |
| ! | AAGAACGAAAATGAAAAACT+AGG | - | chr3_2:40707987-40708006 | None:intergenic | 25.0% |
| !! | AGCTTGAAGAATCATAATTT+TGG | + | chr3_2:40708762-40708781 | Msa0405620:CDS | 25.0% |
| !!! | AAGAATCATAATTTTGGTGT+TGG | + | chr3_2:40708768-40708787 | Msa0405620:CDS | 25.0% |
| !!! | ATAATTTTGGTGTTGGAAAA+TGG | + | chr3_2:40708775-40708794 | Msa0405620:CDS | 25.0% |
| !!! | TAATTTTGGTGTTGGAAAAT+GGG | + | chr3_2:40708776-40708795 | Msa0405620:CDS | 25.0% |
| ! | ACATGACAACCATTATTATT+TGG | - | chr3_2:40708915-40708934 | None:intergenic | 25.0% |
| ! | ATTGTGTTTGAAATCTGAAG+AGG | - | chr3_2:40705939-40705958 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGTTAAGGTTT+CGG | - | chr3_2:40705991-40706010 | None:intergenic | 30.0% |
| ! | TGTTCATGTTGTTGTTGTTA+AGG | - | chr3_2:40705997-40706016 | None:intergenic | 30.0% |
| TAACAACAACAACATGAACA+TGG | + | chr3_2:40705997-40706016 | Msa0405620:exon | 30.0% | |
| !!! | TTGGTTTGGTACTTTTTTGA+AGG | + | chr3_2:40706341-40706360 | Msa0405620:intron | 30.0% |
| !!! | TGGTTTGGTACTTTTTTGAA+GGG | + | chr3_2:40706342-40706361 | Msa0405620:intron | 30.0% |
| !!! | GTACTTTTTTGAAGGGTTTA+GGG | + | chr3_2:40706349-40706368 | Msa0405620:intron | 30.0% |
| ! | GATCCGTTTTCAGAAAATAT+TGG | + | chr3_2:40706487-40706506 | Msa0405620:intron | 30.0% |
| ! | ATATTGGGTTTTCAGATTTG+AGG | + | chr3_2:40706503-40706522 | Msa0405620:intron | 30.0% |
| !! | GATTTGAGGTTTTTGATTGA+CGG | + | chr3_2:40706517-40706536 | Msa0405620:intron | 30.0% |
| !!! | ACTATGGATTTTTAGGTTTG+AGG | + | chr3_2:40706541-40706560 | Msa0405620:intron | 30.0% |
| TTGTAATTGGGATCGAAATT+TGG | + | chr3_2:40706868-40706887 | Msa0405620:intron | 30.0% | |
| TGTAATTGGGATCGAAATTT+GGG | + | chr3_2:40706869-40706888 | Msa0405620:intron | 30.0% | |
| TTATAAAAACCTGCTTCAAC+TGG | + | chr3_2:40707021-40707040 | Msa0405620:intron | 30.0% | |
| TTAGTCGTTAGACCAAAAAT+CGG | + | chr3_2:40707172-40707191 | Msa0405620:intron | 30.0% | |
| AAAATCAAACTCATTTCCAC+AGG | - | chr3_2:40707233-40707252 | None:intergenic | 30.0% | |
| !! | CTAGTTTCATTGATTTAACC+AGG | - | chr3_2:40707256-40707275 | None:intergenic | 30.0% |
| TGAGTTTAACATTGTCTGAT+AGG | + | chr3_2:40707394-40707413 | Msa0405620:intron | 30.0% | |
| GTTACTACTAACTCCAAAAT+CGG | + | chr3_2:40707422-40707441 | Msa0405620:intron | 30.0% | |
| TGAGTTTAACATTGTCTGAT+AGG | + | chr3_2:40707394-40707413 | Msa0405620:intron | 30.0% | |
| TGCTGAAAATATTAGAGACA+TGG | - | chr3_2:40707957-40707976 | None:intergenic | 30.0% | |
| ! | TCTCTAATATTTTCAGCAAG+AGG | + | chr3_2:40707959-40707978 | Msa0405620:intron | 30.0% |
| ! | TATGAAGTTCTAGTAAAGGT+TGG | - | chr3_2:40708032-40708051 | None:intergenic | 30.0% |
| !!! | TGTCATTGCTTGTTTTATAC+AGG | + | chr3_2:40708107-40708126 | Msa0405620:CDS | 30.0% |
| !! | TTTGTTAGCTTGTACTTGAA+GGG | - | chr3_2:40708207-40708226 | None:intergenic | 30.0% |
| !!! | TTTTGTTAGCTTGTACTTGA+AGG | - | chr3_2:40708208-40708227 | None:intergenic | 30.0% |
| !! | GTTGATAATATCAACAACGA+TGG | + | chr3_2:40708702-40708721 | Msa0405620:CDS | 30.0% |
| TCTTTCTCATTTGATCTATC+AGG | - | chr3_2:40708858-40708877 | None:intergenic | 30.0% | |
| AGATCAAATGAGAAAGATGA+TGG | + | chr3_2:40708861-40708880 | Msa0405620:CDS | 30.0% | |
| GATAATAACAAGGAGAATGT+CGG | + | chr3_2:40708888-40708907 | Msa0405620:CDS | 30.0% | |
| AATGTCGGTCCAAATAATAA+TGG | + | chr3_2:40708903-40708922 | Msa0405620:CDS | 30.0% | |
| !! | AAAGGTGTTTGTTGTGAATA+AGG | + | chr3_2:40708941-40708960 | Msa0405620:CDS | 30.0% |
| CAGCTTAAATCTTTGTATAC+AGG | + | chr3_2:40709062-40709081 | Msa0405620:CDS | 30.0% | |
| CTTAAATCTTTGTATACAGG+TGG | + | chr3_2:40709065-40709084 | Msa0405620:CDS | 30.0% | |
| ! | TAATTCTTCTCAAGTATTGC+AGG | + | chr3_2:40709100-40709119 | Msa0405620:CDS | 30.0% |
| ! | AATTCTTCTCAAGTATTGCA+GGG | + | chr3_2:40709101-40709120 | Msa0405620:CDS | 30.0% |
| GGAAAGGCTAGTAAATAATA+AGG | + | chr3_2:40709122-40709141 | Msa0405620:exon | 30.0% | |
| CATGGAAATCACAACAACAA+AGG | + | chr3_2:40706015-40706034 | Msa0405620:CDS | 35.0% | |
| GGAAGAAGAAGTAAAAGAAC+TGG | + | chr3_2:40706036-40706055 | Msa0405620:CDS | 35.0% | |
| AGAAGTAAAAGAACTGGAAG+AGG | + | chr3_2:40706042-40706061 | Msa0405620:CDS | 35.0% | |
| AAAAGAACTGGAAGAGGAAA+AGG | + | chr3_2:40706048-40706067 | Msa0405620:CDS | 35.0% | |
| ! | ACAGAGTGTGAACTATCTTT+TGG | + | chr3_2:40706322-40706341 | Msa0405620:intron | 35.0% |
| !! | GTGTGAACTATCTTTTGGTT+TGG | + | chr3_2:40706327-40706346 | Msa0405620:intron | 35.0% |
| !!! | GGTACTTTTTTGAAGGGTTT+AGG | + | chr3_2:40706348-40706367 | Msa0405620:intron | 35.0% |
| !! | TTTTTGAAGGGTTTAGGGTT+TGG | + | chr3_2:40706354-40706373 | Msa0405620:intron | 35.0% |
| !! | GTTTTTGATTGACGGAACTA+TGG | + | chr3_2:40706525-40706544 | Msa0405620:intron | 35.0% |
| ! | TGACGGAACTATGGATTTTT+AGG | + | chr3_2:40706534-40706553 | Msa0405620:intron | 35.0% |
| AGTTTATGACCTATGAAGCA+CGG | + | chr3_2:40706576-40706595 | Msa0405620:intron | 35.0% | |
| GTAATTGGGATCGAAATTTG+GGG | + | chr3_2:40706870-40706889 | Msa0405620:intron | 35.0% | |
| !! | AGCATTGGCCATTAATATCA+TGG | + | chr3_2:40706905-40706924 | Msa0405620:intron | 35.0% |
| ACGATACTAACACTTAGACA+TGG | + | chr3_2:40707079-40707098 | Msa0405620:intron | 35.0% | |
| !! | GGAAATGAGTTTGATTTTCC+TGG | + | chr3_2:40707235-40707254 | Msa0405620:intron | 35.0% |
| !! | TTATTGACTCAATGAGTCAC+TGG | - | chr3_2:40707344-40707363 | None:intergenic | 35.0% |
| AAAATCAAACTCGTTTCCAC+AGG | - | chr3_2:40707481-40707500 | None:intergenic | 35.0% | |
| !! | TTATTGACTCAATGAGTCAC+TGG | - | chr3_2:40707344-40707363 | None:intergenic | 35.0% |
| AAAAATAGAAGACTCTGGCT+GGG | - | chr3_2:40707685-40707704 | None:intergenic | 35.0% | |
| CACTTGTGTTAGTATTGTGT+TGG | + | chr3_2:40707728-40707747 | Msa0405620:intron | 35.0% | |
| ! | TGTTAGTATTGTGTTGGTGT+CGG | + | chr3_2:40707734-40707753 | Msa0405620:intron | 35.0% |
| AAGTGTGAAGGAAACATAGA+AGG | + | chr3_2:40707789-40707808 | Msa0405620:intron | 35.0% | |
| ! | ATACCAATTTTGTTGCATGC+AGG | + | chr3_2:40708061-40708080 | Msa0405620:intron | 35.0% |
| ATGACAGTTCTCTTGTAGTT+TGG | - | chr3_2:40708093-40708112 | None:intergenic | 35.0% | |
| ! | AAAATGCTCTAGCTCCAAAT+TGG | + | chr3_2:40708175-40708194 | Msa0405620:CDS | 35.0% |
| ACACTTATAGACGAAAGAGA+CGG | + | chr3_2:40708228-40708247 | Msa0405620:CDS | 35.0% | |
| ! | GAAAGAGACGGTTCAATTTT+CGG | + | chr3_2:40708240-40708259 | Msa0405620:CDS | 35.0% |
| TGGTCTGATCAGTACTAAAT+CGG | - | chr3_2:40708301-40708320 | None:intergenic | 35.0% | |
| TGTTCCTCTTAGTGCTAAAA+CGG | - | chr3_2:40708340-40708359 | None:intergenic | 35.0% | |
| AAAGCCTAAAAGGTTCTGTA+AGG | + | chr3_2:40708421-40708440 | Msa0405620:CDS | 35.0% | |
| ! | TGAACCTTACAGAACCTTTT+AGG | - | chr3_2:40708428-40708447 | None:intergenic | 35.0% |
| AAATCAGTGTCTGATGCATA+TGG | + | chr3_2:40708468-40708487 | Msa0405620:CDS | 35.0% | |
| TGTGTAGCAGGAAATTCATT+AGG | + | chr3_2:40708504-40708523 | Msa0405620:CDS | 35.0% | |
| GGAAAATCGTTAGCAAAAGA+AGG | + | chr3_2:40708549-40708568 | Msa0405620:CDS | 35.0% | |
| ATAGCAATTGAAACAGAAGG+CGG | - | chr3_2:40708603-40708622 | None:intergenic | 35.0% | |
| CTCATAGCAATTGAAACAGA+AGG | - | chr3_2:40708606-40708625 | None:intergenic | 35.0% | |
| GCTATGAGTCTAAGAAACAT+TGG | + | chr3_2:40708618-40708637 | Msa0405620:CDS | 35.0% | |
| GAAACAACAACAAGAAGAGT+TGG | + | chr3_2:40708724-40708743 | Msa0405620:CDS | 35.0% | |
| TTCTTCAAGCTAGTTAACCA+TGG | - | chr3_2:40708753-40708772 | None:intergenic | 35.0% | |
| CTATTGTTCACATAGAGATG+AGG | - | chr3_2:40708804-40708823 | None:intergenic | 35.0% | |
| ! | TCAAATGAGAAAGATGATGG+TGG | + | chr3_2:40708864-40708883 | Msa0405620:CDS | 35.0% |
| !! | TGATGGTGGTGATAATAACA+AGG | + | chr3_2:40708878-40708897 | Msa0405620:CDS | 35.0% |
| AAGCTCATGGAATTGAACAA+TGG | + | chr3_2:40708982-40709001 | Msa0405620:CDS | 35.0% | |
| TAATAAGGTCTTGCTCTCAT+TGG | + | chr3_2:40709137-40709156 | Msa0405620:exon | 35.0% | |
| AGGTATCAACACAAGCAAAT+AGG | - | chr3_2:40709186-40709205 | None:intergenic | 35.0% | |
| GAAATCTGAAGAGGAAAGAG+CGG | - | chr3_2:40705930-40705949 | None:intergenic | 40.0% | |
| GTTGTTGTGGTTGAAAAGCA+AGG | + | chr3_2:40706070-40706089 | Msa0405620:CDS | 40.0% | |
| GTTGAAAAGCAAGGAGAAGA+AGG | + | chr3_2:40706079-40706098 | Msa0405620:CDS | 40.0% | |
| !! | GAGATCTCATTAGTTCTAGC+TGG | + | chr3_2:40706167-40706186 | Msa0405620:CDS | 40.0% |
| TCATGTGTCATGTTGATCTG+AGG | + | chr3_2:40706689-40706708 | Msa0405620:intron | 40.0% | |
| GAAATTTGGGGATCCTGATT+TGG | + | chr3_2:40706882-40706901 | Msa0405620:intron | 40.0% | |
| GCTGATTAGACCTATGAACA+CGG | + | chr3_2:40707043-40707062 | Msa0405620:intron | 40.0% | |
| CTAAGTGTTAGTATCGTGTC+TGG | - | chr3_2:40707076-40707095 | None:intergenic | 40.0% | |
| !! | AATCCTAGGTAGCATTGACT+CGG | - | chr3_2:40707154-40707173 | None:intergenic | 40.0% |
| TTGGTCTAACGACTAATCCT+AGG | - | chr3_2:40707168-40707187 | None:intergenic | 40.0% | |
| AGATGCATTTCCGATTGACA+TGG | - | chr3_2:40707207-40707226 | None:intergenic | 40.0% | |
| ATGTCAATCGGAAATGCATC+TGG | + | chr3_2:40707206-40707225 | Msa0405620:intron | 40.0% | |
| CTACTAACTCCAAAATCGGT+CGG | + | chr3_2:40707426-40707445 | Msa0405620:intron | 40.0% | |
| AGATGCATTTCCGATTGACA+TGG | - | chr3_2:40707207-40707226 | None:intergenic | 40.0% | |
| ATGTCAATCGGAAATGCATC+TGG | + | chr3_2:40707206-40707225 | Msa0405620:intron | 40.0% | |
| !! | GGAAACGAGTTTGATTTTGC+TGG | + | chr3_2:40707483-40707502 | Msa0405620:intron | 40.0% |
| AAAATAGAAGACTCTGGCTG+GGG | - | chr3_2:40707684-40707703 | None:intergenic | 40.0% | |
| GAAAAATAGAAGACTCTGGC+TGG | - | chr3_2:40707686-40707705 | None:intergenic | 40.0% | |
| ACACAAGTGCACAAAGTAGA+AGG | - | chr3_2:40707717-40707736 | None:intergenic | 40.0% | |
| ACTTCAGATTGAAGCGTGTT+TGG | - | chr3_2:40707773-40707792 | None:intergenic | 40.0% | |
| ! | GAAGTTCTAGTAAAGGTTGG+AGG | - | chr3_2:40708029-40708048 | None:intergenic | 40.0% |
| CTTCCTGCATGCAACAAAAT+TGG | - | chr3_2:40708067-40708086 | None:intergenic | 40.0% | |
| ! | CAATTTTGTTGCATGCAGGA+AGG | + | chr3_2:40708065-40708084 | Msa0405620:intron | 40.0% |
| !! | TTTGGAGCTAGAGCATTTTC+TGG | - | chr3_2:40708174-40708193 | None:intergenic | 40.0% |
| TTGAAGGGAATCCACCAATT+TGG | - | chr3_2:40708192-40708211 | None:intergenic | 40.0% | |
| !! | TTTTCGGTGCAATACTCGAA+TGG | + | chr3_2:40708256-40708275 | Msa0405620:CDS | 40.0% |
| ! | TTTCGGTGCAATACTCGAAT+GGG | + | chr3_2:40708257-40708276 | Msa0405620:CDS | 40.0% |
| !! | TTAGTACTGATCAGACCAAG+TGG | + | chr3_2:40708303-40708322 | Msa0405620:CDS | 40.0% |
| ! | CTTAGTGCTAAAACGGCTTT+TGG | - | chr3_2:40708333-40708352 | None:intergenic | 40.0% |
| !! | AAAGCCGTTTTAGCACTAAG+AGG | + | chr3_2:40708333-40708352 | Msa0405620:CDS | 40.0% |
| AGTAGCAATGTTTGTGTAGC+AGG | + | chr3_2:40708492-40708511 | Msa0405620:CDS | 40.0% | |
| TAGCAATTGAAACAGAAGGC+GGG | - | chr3_2:40708602-40708621 | None:intergenic | 40.0% | |
| GATTCTCTTCCAAGCTAACT+CGG | - | chr3_2:40708652-40708671 | None:intergenic | 40.0% | |
| CAGAAGTTTCATGAAGCTCA+TGG | + | chr3_2:40708969-40708988 | Msa0405620:CDS | 40.0% | |
| CTCATGGAATTGAACAATGG+TGG | + | chr3_2:40708985-40709004 | Msa0405620:CDS | 40.0% | |
| TCTTTGTATACAGGTGGTAG+TGG | + | chr3_2:40709071-40709090 | Msa0405620:CDS | 40.0% | |
| ! | TTCTCAAGTATTGCAGGGAA+AGG | + | chr3_2:40709106-40709125 | Msa0405620:CDS | 40.0% |
| GGAAGAGGAAAAGGTTGTTG+TGG | + | chr3_2:40706057-40706076 | Msa0405620:CDS | 45.0% | |
| CCAGACACGTGAAATGCATA+AGG | - | chr3_2:40706118-40706137 | None:intergenic | 45.0% | |
| CCTTATGCATTTCACGTGTC+TGG | + | chr3_2:40706115-40706134 | Msa0405620:CDS | 45.0% | |
| AATGGCCAATGCTCCAAATC+AGG | - | chr3_2:40706898-40706917 | None:intergenic | 45.0% | |
| TCTAATCAGCCAGTTGAAGC+AGG | - | chr3_2:40707033-40707052 | None:intergenic | 45.0% | |
| ! | TGGTTTGTGTCCGTGTTCAT+AGG | - | chr3_2:40707056-40707075 | None:intergenic | 45.0% |
| !! | TGGTGACTCTGACCGATTTT+TGG | - | chr3_2:40707187-40707206 | None:intergenic | 45.0% |
| GTCAGAGTCACCATGTCAAT+CGG | + | chr3_2:40707194-40707213 | Msa0405620:intron | 45.0% | |
| ! | CGCTTCAATCTGAAGTGTGA+AGG | + | chr3_2:40707777-40707796 | Msa0405620:intron | 45.0% |
| AGGTTGGAGGATTCTCAATC+AGG | - | chr3_2:40708016-40708035 | None:intergenic | 45.0% | |
| ! | ATGCTCTAGCTCCAAATTGG+TGG | + | chr3_2:40708178-40708197 | Msa0405620:CDS | 45.0% |
| GAGACATCCAAGATGACCTT+CGG | + | chr3_2:40708385-40708404 | Msa0405620:CDS | 45.0% | |
| GCAGGAAATTCATTAGGAGC+TGG | + | chr3_2:40708510-40708529 | Msa0405620:CDS | 45.0% | |
| !!! | GCTGGTTTTGCACTTCAAGT+TGG | + | chr3_2:40708528-40708547 | Msa0405620:CDS | 45.0% |
| GAGAAAAAGCCGAGTTAGCT+TGG | + | chr3_2:40708640-40708659 | Msa0405620:CDS | 45.0% | |
| ACAAGAAGAGTTGGATGCCA+TGG | + | chr3_2:40708733-40708752 | Msa0405620:CDS | 45.0% | |
| TGGTTGTCATGTTGCTGCAA+AGG | + | chr3_2:40708923-40708942 | Msa0405620:CDS | 45.0% | |
| !! | TATACAGGTGGTAGTGGTAG+TGG | + | chr3_2:40709077-40709096 | Msa0405620:CDS | 45.0% |
| AGAGGAAAGAGCGGAAGTGA+AGG | - | chr3_2:40705921-40705940 | None:intergenic | 50.0% | |
| CATTTCACGTGTCTGGTCCA+AGG | + | chr3_2:40706122-40706141 | Msa0405620:CDS | 50.0% | |
| CGTGTCTGGTCCAAGGAATT+TGG | + | chr3_2:40706129-40706148 | Msa0405620:CDS | 50.0% | |
| CCTATGAAGCACGGATACAC+CGG | + | chr3_2:40706585-40706604 | Msa0405620:intron | 50.0% | |
| !! | GGGATCCTGATTTGGAGCAT+TGG | + | chr3_2:40706890-40706909 | Msa0405620:intron | 50.0% |
| TTGCCGAGTCAATGCTACCT+AGG | + | chr3_2:40707148-40707167 | Msa0405620:intron | 50.0% | |
| !! | ACATGGTGACCGACCGATTT+TGG | - | chr3_2:40707438-40707457 | None:intergenic | 50.0% |
| GGATGTCTCTTCGCATTGTG+TGG | - | chr3_2:40708374-40708393 | None:intergenic | 50.0% | |
| ! | CTTTTAGGCTTTCCCAAGCG+AGG | - | chr3_2:40708413-40708432 | None:intergenic | 50.0% |
| CTCGCTTGGGAAAGCCTAAA+AGG | + | chr3_2:40708411-40708430 | Msa0405620:CDS | 50.0% | |
| ATGCTTCCTTCAAGCAGCGA+AGG | + | chr3_2:40708678-40708697 | Msa0405620:CDS | 50.0% | |
| TCAACTCCTTCGCTGCTTGA+AGG | - | chr3_2:40708687-40708706 | None:intergenic | 50.0% | |
| CCGGTGTATCCGTGCTTCAT+AGG | - | chr3_2:40706588-40706607 | None:intergenic | 55.0% | |
| CGGAAATGCATCTGGACCTG+TGG | + | chr3_2:40707214-40707233 | Msa0405620:intron | 55.0% | |
| CGGTCGGTCACCATGTCAAT+CGG | + | chr3_2:40707442-40707461 | Msa0405620:intron | 55.0% | |
| CGGAAATGCATCTGGACCTG+TGG | + | chr3_2:40707214-40707233 | Msa0405620:intron | 55.0% | |
| !! | ACGGCTTTTGGTGCACCACT+TGG | - | chr3_2:40708321-40708340 | None:intergenic | 55.0% |
| CGAGGAACCGAAGGTCATCT+TGG | - | chr3_2:40708395-40708414 | None:intergenic | 55.0% | |
| ATGACCTTCGGTTCCTCGCT+TGG | + | chr3_2:40708397-40708416 | Msa0405620:CDS | 55.0% | |
| TGACCTTCGGTTCCTCGCTT+GGG | + | chr3_2:40708398-40708417 | Msa0405620:CDS | 55.0% | |
| TTTCCCAAGCGAGGAACCGA+AGG | - | chr3_2:40708404-40708423 | None:intergenic | 55.0% | |
| CGGATACACCGGACACGACA+CGG | + | chr3_2:40706596-40706615 | Msa0405620:intron | 60.0% | |
| GTCTGTGTCCGTGTCGTGTC+CGG | - | chr3_2:40706607-40706626 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 40705891 | 40709312 | 40705891 | ID=Msa0405620;Name=Msa0405620 |
| chr3_2 | mRNA | 40705891 | 40709312 | 40705891 | ID=Msa0405620-mRNA-1;Parent=Msa0405620;Name=Msa0405620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=119|1|1|1|1|1|2|173|411 |
| chr3_2 | exon | 40705891 | 40706188 | 40705891 | ID=Msa0405620-mRNA-1:exon:7852;Parent=Msa0405620-mRNA-1 |
| chr3_2 | exon | 40708083 | 40709312 | 40708083 | ID=Msa0405620-mRNA-1:exon:7853;Parent=Msa0405620-mRNA-1 |
| chr3_2 | five_prime_UTR | 40705891 | 40706009 | 40705891 | ID=Msa0405620-mRNA-1:five_prime_utr;Parent=Msa0405620-mRNA-1 |
| chr3_2 | CDS | 40706010 | 40706188 | 40706010 | ID=Msa0405620-mRNA-1:cds;Parent=Msa0405620-mRNA-1 |
| chr3_2 | CDS | 40708083 | 40709139 | 40708083 | ID=Msa0405620-mRNA-1:cds;Parent=Msa0405620-mRNA-1 |
| chr3_2 | three_prime_UTR | 40709140 | 40709312 | 40709140 | ID=Msa0405620-mRNA-1:three_prime_utr;Parent=Msa0405620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
