AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1359980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1359980 MtrunA17_Chr4g0062291 97.863 702 9 3 1 702 1 696 0.0 1409
Msa1359980 MtrunA17_Chr2g0307481 69.209 708 141 15 1 701 1 638 0.0 897
Msa1359980 MtrunA17_Chr6g0485471 39.650 343 179 8 128 460 114 438 1.36e-58 210
Msa1359980 MtrunA17_Chr2g0327581 36.592 358 196 7 127 463 47 394 6.79e-58 212
Msa1359980 MtrunA17_Chr5g0411971 34.560 489 271 12 122 594 392 847 2.78e-57 210
Msa1359980 MtrunA17_Chr1g0182151 36.313 358 196 7 128 463 53 400 5.90e-57 209
Msa1359980 MtrunA17_Chr4g0045381 35.000 440 246 12 44 461 110 531 5.96e-57 210
Msa1359980 MtrunA17_Chr1g0193221 36.283 339 188 8 129 457 3 323 8.13e-57 209
Msa1359980 MtrunA17_Chr4g0069141 37.466 363 188 11 130 470 154 499 8.75e-56 207
Msa1359980 MtrunA17_Chr5g0421521 34.221 488 274 14 122 594 367 822 1.04e-55 205
Msa1359980 MtrunA17_Chr1g0178411 36.957 368 186 9 127 463 11 363 1.56e-55 205
Msa1359980 MtrunA17_Chr5g0421591 34.021 485 279 12 122 594 367 822 1.97e-55 204
Msa1359980 MtrunA17_Chr7g0266631 36.388 371 184 9 127 463 7 359 2.04e-55 204
Msa1359980 MtrunA17_Chr1g0152231 36.311 347 190 7 129 460 3 333 9.16e-55 201
Msa1359980 MtrunA17_Chr1g0191851 34.862 436 234 11 122 522 140 560 1.45e-54 200
Msa1359980 MtrunA17_Chr7g0271961 34.228 447 253 12 130 564 402 819 1.50e-54 202
Msa1359980 MtrunA17_Chr2g0312631 37.255 357 201 5 116 462 368 711 2.10e-54 202
Msa1359980 MtrunA17_Chr2g0331761 38.279 337 192 8 128 460 184 508 3.12e-54 198
Msa1359980 MtrunA17_Chr4g0035661 35.503 338 200 6 130 465 90 411 4.46e-54 201
Msa1359980 MtrunA17_Chr1g0192481 38.068 352 193 8 130 470 59 396 5.63e-54 195
Msa1359980 MtrunA17_Chr4g0067421 37.326 359 205 8 128 475 204 553 2.62e-53 197
Msa1359980 MtrunA17_Chr2g0295881 37.568 370 203 10 128 480 196 554 3.40e-53 197
Msa1359980 MtrunA17_Chr3g0145071 33.858 381 225 8 130 508 100 455 3.77e-53 198
Msa1359980 MtrunA17_Chr8g0369881 36.499 337 194 7 129 460 875 1196 1.50e-52 197
Msa1359980 MtrunA17_Chr1g0153061 35.925 373 185 10 130 463 9 366 1.52e-52 196
Msa1359980 MtrunA17_Chr5g0407791 36.499 337 194 6 129 460 889 1210 1.68e-52 196
Msa1359980 MtrunA17_Chr1g0195111 37.685 337 184 7 180 506 438 758 1.96e-52 196
Msa1359980 MtrunA17_Chr4g0053211 39.091 330 154 11 179 463 47 374 2.80e-52 195
Msa1359980 MtrunA17_Chr3g0134191 36.193 373 184 9 130 463 9 366 3.09e-52 195
Msa1359980 MtrunA17_Chr7g0258991 33.584 399 228 9 125 515 69 438 8.07e-52 194
Msa1359980 MtrunA17_Chr7g0272871 36.676 349 194 7 122 460 120 451 3.65e-51 190
Msa1359980 MtrunA17_Chr3g0122121 37.430 358 187 9 128 463 97 439 4.08e-51 192
Msa1359980 MtrunA17_Chr3g0102921 35.211 426 219 12 130 528 439 834 5.15e-51 192
Msa1359980 MtrunA17_Chr8g0377731 41.290 310 157 8 177 463 86 393 1.20e-50 191
Msa1359980 MtrunA17_Chr1g0191181 35.787 394 209 12 130 506 89 455 4.93e-50 185
Msa1359980 MtrunA17_Chr3g0142261 35.641 390 209 10 129 509 19 375 1.27e-49 188
Msa1359980 MtrunA17_Chr5g0398521 33.971 418 229 14 129 518 57 455 2.65e-49 186
Msa1359980 MtrunA17_Chr3g0132921 30.856 444 228 12 130 517 10 430 2.74e-48 178
Msa1359980 MtrunA17_Chr5g0447041 34.400 375 180 8 182 506 480 838 6.27e-48 182
Msa1359980 MtrunA17_Chr6g0483701 34.127 378 217 10 129 499 30 382 1.73e-47 181
Msa1359980 MtrunA17_Chr2g0322291 38.796 299 162 7 182 461 130 426 2.21e-47 181
Msa1359980 MtrunA17_Chr5g0405181 34.555 382 212 10 129 499 20 374 4.51e-47 179
Msa1359980 MtrunA17_Chr4g0036001 35.043 351 201 8 123 464 18 350 7.28e-47 178
Msa1359980 MtrunA17_Chr5g0427481 35.443 316 168 8 179 464 52 361 5.37e-46 177
Msa1359980 MtrunA17_Chr4g0070001 33.170 407 234 13 106 498 126 508 8.01e-46 176
Msa1359980 MtrunA17_Chr7g0245931 32.683 410 232 11 129 512 52 443 9.26e-46 175
Msa1359980 MtrunA17_Chr8g0372171 35.652 345 189 8 129 460 19 343 2.62e-45 174
Msa1359980 MtrunA17_Chr7g0257301 31.265 419 207 9 130 503 393 775 4.95e-45 174
Msa1359980 MtrunA17_Chr4g0042061 35.530 349 192 10 130 457 433 769 9.10e-45 172
Msa1359980 MtrunA17_Chr2g0319271 35.127 353 189 11 130 457 400 737 1.06e-44 171
Msa1359980 MtrunA17_Chr4g0049011 35.754 358 192 10 130 464 280 622 1.36e-44 169
Msa1359980 MtrunA17_Chr7g0238581 35.174 344 195 11 128 461 24 349 2.10e-44 169
Msa1359980 MtrunA17_Chr2g0280421 37.884 293 167 7 182 464 483 770 5.97e-43 166
Msa1359980 MtrunA17_Chr8g0367581 29.412 374 236 10 130 498 147 497 2.22e-31 131
Msa1359980 MtrunA17_Chr3g0101021 31.068 309 191 7 177 463 103 411 6.73e-31 130
Msa1359980 MtrunA17_Chr5g0445211 32.219 329 188 12 177 472 104 430 9.83e-31 129
Msa1359980 MtrunA17_Chr7g0269681 39.698 199 105 3 305 503 42 225 5.25e-30 124
Msa1359980 MtrunA17_Chr8g0386891 35.885 209 119 3 302 510 2 195 1.89e-27 115
Msa1359980 MtrunA17_Chr1g0187411 24.165 389 235 10 180 526 169 539 5.16e-24 107
Msa1359980 MtrunA17_Chr6g0470541 28.077 260 178 3 182 440 51 302 5.68e-23 104
Msa1359980 MtrunA17_Chr8g0390991 37.500 192 116 2 306 497 6 193 2.32e-22 101
Msa1359980 MtrunA17_Chr6g0484501 34.404 218 123 4 293 494 23 236 5.55e-22 95.5
Msa1359980 MtrunA17_Chr3g0142841 27.652 264 152 6 184 427 145 389 7.78e-22 101
Msa1359980 MtrunA17_Chr8g0390981 35.366 164 89 5 122 279 508 660 1.21e-16 84.0
Msa1359980 MtrunA17_Chr7g0269691 41.905 105 56 2 180 280 442 545 4.30e-15 79.0
Msa1359980 MtrunA17_Chr6g0484511 32.934 167 89 5 122 279 282 434 4.92e-15 78.6
Msa1359980 MtrunA17_Chr8g0386901 39.252 107 60 2 182 284 529 634 1.08e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1359980 AT1G18550.1 60.533 750 213 21 1 697 1 720 0.0 799
Msa1359980 AT3G49650.1 43.478 391 190 13 130 506 15 388 2.09e-79 270
Msa1359980 AT3G16060.1 39.306 346 192 6 120 460 160 492 1.44e-58 210
Msa1359980 AT2G28620.3 38.611 360 186 8 127 463 48 395 2.16e-58 214
Msa1359980 AT2G28620.2 38.611 360 186 8 127 463 48 395 2.16e-58 214
Msa1359980 AT2G28620.1 38.611 360 186 8 127 463 48 395 2.37e-58 214
Msa1359980 AT2G36200.1 36.685 368 187 9 127 463 10 362 8.52e-57 209
Msa1359980 AT2G36200.2 36.685 368 187 9 127 463 10 362 1.99e-56 208
Msa1359980 AT3G10180.1 40.972 288 155 7 182 457 40 324 2.11e-56 209
Msa1359980 AT3G10180.2 40.972 288 155 7 182 457 40 324 2.31e-56 208
Msa1359980 AT4G39050.1 35.696 381 218 8 130 508 99 454 7.78e-56 206
Msa1359980 AT2G37420.1 39.159 309 165 5 175 463 88 393 1.05e-55 206
Msa1359980 AT2G37420.2 39.159 309 165 5 175 463 88 393 1.05e-55 206
Msa1359980 AT1G59540.1 37.353 340 195 9 184 517 46 373 1.11e-55 204
Msa1359980 AT3G45850.2 35.475 358 200 7 127 463 53 400 1.29e-55 206
Msa1359980 AT3G45850.1 35.475 358 200 7 127 463 53 400 1.29e-55 206
Msa1359980 AT2G21380.2 34.737 380 221 7 130 507 105 459 2.32e-55 205
Msa1359980 AT2G21380.1 34.737 380 221 7 130 507 105 459 2.32e-55 205
Msa1359980 AT3G16630.2 37.741 363 189 8 128 471 192 536 2.33e-55 203
Msa1359980 AT3G16630.1 37.741 363 189 8 128 471 192 536 2.33e-55 203
Msa1359980 AT2G22610.1 39.429 350 191 7 130 471 418 754 4.23e-55 204
Msa1359980 AT2G22610.2 39.429 350 191 7 130 471 418 754 5.24e-55 204
Msa1359980 AT2G22610.3 39.429 350 191 7 130 471 419 755 6.04e-55 204
Msa1359980 AT5G47820.2 36.074 377 183 9 130 463 12 373 2.02e-53 199
Msa1359980 AT5G47820.1 36.074 377 183 9 130 463 12 373 2.02e-53 199
Msa1359980 AT4G24170.1 35.533 394 219 7 129 518 6 368 2.26e-53 199
Msa1359980 AT4G24170.2 35.533 394 219 7 129 518 6 368 2.26e-53 199
Msa1359980 AT3G19050.1 34.458 415 218 12 91 474 156 547 9.89e-53 198
Msa1359980 AT5G27550.2 38.329 347 191 8 122 460 125 456 1.76e-52 194
Msa1359980 AT5G27550.1 38.329 347 191 8 122 460 125 456 1.76e-52 194
Msa1359980 AT3G44730.2 32.731 443 264 9 122 542 415 845 7.93e-52 195
Msa1359980 AT3G44730.3 32.731 443 264 9 122 542 415 845 7.93e-52 195
Msa1359980 AT3G44730.1 32.731 443 264 9 122 542 370 800 8.08e-52 194
Msa1359980 AT3G44730.4 32.731 443 264 9 122 542 370 800 8.08e-52 194
Msa1359980 AT3G17360.2 39.053 338 172 10 182 499 210 533 1.70e-51 194
Msa1359980 AT3G17360.1 39.053 338 172 10 182 499 210 533 1.76e-51 194
Msa1359980 AT3G17360.3 39.053 338 172 10 182 499 210 533 1.78e-51 194
Msa1359980 AT5G27000.1 40.741 297 163 6 182 470 440 731 2.42e-51 193
Msa1359980 AT3G12020.4 34.146 328 203 5 182 507 110 426 2.74e-51 192
Msa1359980 AT3G12020.1 34.146 328 203 5 182 507 110 426 2.74e-51 192
Msa1359980 AT5G65930.1 36.499 337 194 7 129 460 887 1208 5.58e-51 192
Msa1359980 AT5G65930.2 36.499 337 194 7 129 460 888 1209 5.90e-51 192
Msa1359980 AT5G65930.3 36.499 337 194 7 129 460 894 1215 7.59e-51 192
Msa1359980 AT3G12020.3 34.146 328 203 5 182 507 110 426 7.76e-51 191
Msa1359980 AT3G12020.2 34.146 328 203 5 182 507 110 426 7.76e-51 191
Msa1359980 AT5G06670.8 32.071 396 236 8 113 506 58 422 9.38e-51 189
Msa1359980 AT5G06670.4 32.071 396 236 8 113 506 58 422 9.38e-51 189
Msa1359980 AT5G06670.7 32.071 396 236 8 113 506 58 422 9.38e-51 189
Msa1359980 AT5G06670.5 32.071 396 236 8 113 506 58 422 1.04e-50 189
Msa1359980 AT3G54870.3 38.261 345 182 11 172 493 140 476 2.52e-50 189
Msa1359980 AT3G54870.1 38.261 345 182 11 172 493 140 476 2.63e-50 189
Msa1359980 AT2G47500.2 35.825 388 204 11 130 503 400 756 2.65e-50 189
Msa1359980 AT2G47500.1 35.825 388 204 11 130 503 400 756 2.71e-50 189
Msa1359980 AT1G09170.5 37.008 381 218 8 130 501 435 802 2.91e-50 190
Msa1359980 AT1G21730.1 35.159 347 201 8 125 465 71 399 3.30e-50 189
Msa1359980 AT4G14150.1 36.438 365 192 9 122 464 84 430 3.36e-50 190
Msa1359980 AT3G54870.2 38.261 345 182 11 172 493 140 476 3.47e-50 189
Msa1359980 AT5G06670.2 32.071 396 236 8 113 506 58 422 4.50e-50 189
Msa1359980 AT5G06670.3 32.071 396 236 8 113 506 58 422 4.50e-50 189
Msa1359980 AT1G09170.4 37.008 381 218 8 130 501 435 802 6.04e-50 188
Msa1359980 AT3G44050.1 38.244 353 182 12 130 461 94 431 7.11e-50 189
Msa1359980 AT1G09170.2 37.008 381 218 8 130 501 435 802 8.36e-50 187
Msa1359980 AT1G73860.1 32.678 407 229 8 122 512 502 879 9.03e-50 188
Msa1359980 AT1G72250.1 35.533 394 223 9 130 512 492 865 3.27e-49 187
Msa1359980 AT1G72250.4 35.533 394 223 9 130 512 512 885 3.51e-49 187
Msa1359980 AT1G73860.2 32.678 407 229 8 122 512 419 796 3.76e-49 186
Msa1359980 AT1G72250.3 35.533 394 223 9 130 512 513 886 3.85e-49 187
Msa1359980 AT1G72250.2 35.533 394 223 9 130 512 501 874 4.10e-49 186
Msa1359980 AT1G55550.1 34.565 379 210 10 130 495 92 445 6.19e-49 185
Msa1359980 AT3G50240.2 36.923 325 164 9 179 463 60 383 6.29e-49 185
Msa1359980 AT1G12430.2 37.640 356 185 12 129 460 70 412 6.60e-49 185
Msa1359980 AT1G12430.1 37.640 356 185 12 129 460 70 412 6.89e-49 185
Msa1359980 AT3G50240.1 36.923 325 164 9 179 463 60 383 9.64e-49 185
Msa1359980 AT3G50240.4 36.923 325 164 9 179 463 60 383 1.07e-48 185
Msa1359980 AT1G18370.1 32.063 446 258 13 129 543 31 462 1.51e-48 184
Msa1359980 AT1G09170.3 37.536 349 197 7 130 470 435 770 1.94e-48 183
Msa1359980 AT1G09170.7 37.536 349 197 7 130 470 435 770 1.94e-48 183
Msa1359980 AT1G18410.5 33.799 358 208 8 122 470 472 809 3.26e-48 183
Msa1359980 AT5G60930.3 35.494 324 171 6 179 464 41 364 3.42e-48 184
Msa1359980 AT5G60930.1 35.494 324 171 6 179 464 41 364 3.66e-48 184
Msa1359980 AT5G60930.2 35.494 324 171 6 179 464 41 364 4.54e-48 184
Msa1359980 AT1G18410.1 33.520 358 209 7 122 470 625 962 6.04e-48 183
Msa1359980 AT3G23670.1 35.440 364 195 9 123 464 90 435 8.63e-48 182
Msa1359980 AT3G23670.2 35.440 364 195 9 123 464 90 435 1.08e-47 182
Msa1359980 AT5G06670.6 31.358 405 236 9 113 506 58 431 1.73e-47 181
Msa1359980 AT5G06670.1 31.358 405 236 9 113 506 58 431 1.73e-47 181
Msa1359980 AT1G18410.3 33.333 363 211 8 122 470 482 827 1.80e-47 181
Msa1359980 AT1G18410.2 33.333 363 211 8 122 470 482 827 1.80e-47 181
Msa1359980 AT1G18410.4 33.058 363 212 7 122 470 625 970 2.48e-47 181
Msa1359980 AT1G01950.2 35.878 393 204 15 97 460 29 402 3.22e-47 180
Msa1359980 AT1G01950.1 35.878 393 204 15 97 460 29 402 4.18e-47 180
Msa1359980 AT1G01950.3 35.878 393 204 15 97 460 29 402 5.56e-47 179
Msa1359980 AT1G63640.2 35.920 348 199 9 122 462 465 795 1.78e-46 178
Msa1359980 AT1G63640.5 35.977 353 199 10 122 462 455 792 1.81e-46 178
Msa1359980 AT1G63640.3 35.977 353 199 10 122 462 465 802 1.83e-46 178
Msa1359980 AT3G10310.2 34.072 361 208 7 182 532 407 747 1.87e-46 178
Msa1359980 AT1G63640.1 35.977 353 199 10 122 462 465 802 1.93e-46 178
Msa1359980 AT1G63640.4 35.977 353 199 10 122 462 465 802 1.93e-46 178
Msa1359980 AT3G10310.1 34.072 361 208 7 182 532 407 747 2.23e-46 178
Msa1359980 AT5G41310.1 35.211 355 181 9 122 462 415 734 3.44e-46 177
Msa1359980 AT5G66310.2 35.920 348 198 10 123 460 10 342 3.52e-46 177
Msa1359980 AT5G66310.3 35.920 348 198 10 123 460 10 342 3.52e-46 177
Msa1359980 AT5G66310.1 35.920 348 198 10 123 460 10 342 3.52e-46 177
Msa1359980 AT5G27950.1 37.391 345 182 10 130 460 80 404 5.27e-46 174
Msa1359980 AT3G43210.3 32.995 394 222 11 113 499 20 378 1.41e-45 175
Msa1359980 AT3G43210.5 32.995 394 222 11 113 499 20 378 1.41e-45 175
Msa1359980 AT3G43210.2 32.995 394 222 11 113 499 20 378 1.41e-45 175
Msa1359980 AT3G43210.4 32.995 394 222 11 113 499 20 378 1.41e-45 175
Msa1359980 AT3G43210.1 32.995 394 222 11 113 499 20 378 1.41e-45 175
Msa1359980 AT3G63480.2 33.073 384 222 10 128 491 2 370 1.84e-45 169
Msa1359980 AT3G51150.1 33.248 391 235 10 129 514 17 386 2.83e-45 175
Msa1359980 AT2G21300.2 34.383 381 212 10 129 499 24 376 3.17e-45 174
Msa1359980 AT2G21300.4 34.383 381 212 10 129 499 24 376 3.17e-45 174
Msa1359980 AT2G21300.3 34.383 381 212 10 129 499 24 376 3.17e-45 174
Msa1359980 AT2G21300.1 34.383 381 212 10 129 499 24 376 3.17e-45 174
Msa1359980 AT2G21300.5 34.383 381 212 10 129 499 24 376 3.17e-45 174
Msa1359980 AT3G51150.2 33.248 391 235 10 129 514 17 386 3.28e-45 174
Msa1359980 AT3G51150.4 33.248 391 235 10 129 514 17 386 3.28e-45 174
Msa1359980 AT3G51150.3 33.248 391 235 10 129 514 17 386 3.28e-45 174
Msa1359980 AT5G54670.3 39.116 294 155 8 182 457 383 670 1.28e-44 171
Msa1359980 AT5G54670.1 36.705 346 187 10 130 456 397 729 1.50e-44 171
Msa1359980 AT5G54670.2 36.705 346 187 10 130 456 397 729 1.50e-44 171
Msa1359980 AT4G21270.1 34.670 349 194 9 130 456 432 768 8.67e-44 169
Msa1359980 AT3G63480.1 32.732 388 222 11 128 491 2 374 1.55e-43 164
Msa1359980 AT4G38950.3 35.362 345 194 8 129 463 13 338 1.62e-43 169
Msa1359980 AT4G38950.5 35.362 345 194 8 129 463 13 338 1.62e-43 169
Msa1359980 AT4G38950.4 35.362 345 194 8 129 463 13 338 1.62e-43 169
Msa1359980 AT4G38950.1 35.362 345 194 8 129 463 13 338 1.62e-43 169
Msa1359980 AT4G38950.2 35.362 345 194 8 129 463 13 338 1.62e-43 169
Msa1359980 AT1G09170.1 34.828 379 193 9 130 501 435 766 6.54e-43 167
Msa1359980 AT4G05190.1 37.374 297 160 7 182 457 475 766 8.46e-43 166
Msa1359980 AT4G05190.2 37.374 297 160 7 182 457 462 753 1.14e-42 166
Msa1359980 AT4G27180.1 37.755 294 159 8 182 457 434 721 2.39e-41 161
Msa1359980 AT4G27180.2 37.755 294 159 8 182 457 434 721 2.39e-41 161
Msa1359980 AT3G50240.3 37.993 279 134 7 223 463 4 281 4.09e-41 162
Msa1359980 AT1G59540.2 36.860 293 167 9 231 517 1 281 4.73e-40 157
Msa1359980 AT1G09170.6 38.689 305 166 8 130 426 435 726 8.86e-40 157
Msa1359980 AT1G09170.8 38.689 305 166 8 130 426 435 726 8.86e-40 157
Msa1359980 AT5G02370.1 32.162 370 213 12 128 487 19 360 1.98e-39 154
Msa1359980 AT5G65460.2 29.820 389 231 11 130 506 139 497 2.69e-36 147
Msa1359980 AT5G65460.4 29.820 389 231 11 130 506 139 497 2.85e-36 147
Msa1359980 AT5G65460.1 29.820 389 231 11 130 506 139 497 2.92e-36 147
Msa1359980 AT5G65460.6 29.820 389 231 11 130 506 139 497 3.13e-36 147
Msa1359980 AT5G42490.2 35.816 282 166 4 124 403 4 272 2.26e-35 144
Msa1359980 AT5G42490.1 35.816 282 166 4 124 403 4 272 2.39e-35 144
Msa1359980 AT5G65460.3 29.293 396 231 12 130 506 139 504 2.61e-34 141
Msa1359980 AT5G10470.1 29.793 386 235 11 130 506 143 501 4.36e-34 140
Msa1359980 AT5G10470.2 29.793 386 235 11 130 506 143 501 4.52e-34 140
Msa1359980 AT1G01950.4 37.970 266 137 10 218 460 1 261 8.28e-34 139
Msa1359980 AT5G27950.2 39.344 244 128 6 231 460 1 238 4.69e-33 133
Msa1359980 AT4G14330.1 27.660 376 233 8 177 528 84 444 4.87e-31 130
Msa1359980 AT3G20150.1 32.468 308 178 11 177 458 131 434 2.85e-30 128
Msa1359980 AT3G20150.2 32.468 308 178 11 177 458 131 434 4.09e-30 127
Msa1359980 AT3G51150.5 34.513 226 137 4 291 514 17 233 1.70e-22 103
Msa1359980 AT5G65460.5 31.727 249 148 7 265 506 18 251 6.63e-22 102
Msa1359980 AT5G23910.2 27.957 279 168 9 161 434 48 298 6.37e-19 92.0
Msa1359980 AT5G23910.1 27.957 279 168 9 161 434 44 294 8.43e-19 91.7
Msa1359980 AT1G20060.9 25.356 351 225 11 139 469 122 455 2.09e-17 87.4
Msa1359980 AT1G20060.3 25.356 351 225 11 139 469 122 455 2.43e-17 87.0
Msa1359980 AT1G20060.7 25.356 351 225 11 139 469 122 455 2.55e-17 87.0
Msa1359980 AT1G20060.10 25.356 351 225 11 139 469 122 455 2.69e-17 87.0
Msa1359980 AT1G20060.5 25.356 351 225 11 139 469 122 455 2.89e-17 87.0
Msa1359980 AT1G20060.4 25.356 351 225 11 139 469 122 455 3.01e-17 87.0
Msa1359980 AT1G20060.6 25.356 351 225 11 139 469 122 455 3.09e-17 86.7
Msa1359980 AT1G20060.2 25.356 351 225 11 139 469 122 455 3.12e-17 86.7
Msa1359980 AT1G20060.8 25.356 351 225 11 139 469 122 455 3.22e-17 86.7
Msa1359980 AT1G20060.1 24.932 365 221 15 139 469 122 467 3.10e-11 67.4

Find 189 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTTTCTTCTTGATTTC+TGG 0.025781 tig0016871:-21612 None:intergenic
CCATCAGTTACTACATTAAA+TGG 0.172467 tig0016871:+21933 Msa1359980:CDS
CAGCCCAGTGAACGGTGTTC+TGG 0.215387 tig0016871:-21172 None:intergenic
GTGTCTACATCTCAAATAAA+TGG 0.253252 tig0016871:-22443 None:intergenic
CTCTTCAATTCACCATTGTT+TGG 0.266566 tig0016871:-21840 None:intergenic
CTCTCATTAATTGATCTTGC+AGG 0.290848 tig0016871:+20915 Msa1359980:CDS
GAATCCAGGGGTGATGGTTT+TGG 0.304479 tig0016871:+20116 Msa1359980:CDS
TTCTGAAAGTACATGACTTC+TGG 0.308645 tig0016871:-21964 None:intergenic
AACCTTCAGCCGAATCTCTT+TGG 0.308911 tig0016871:-21201 None:intergenic
CACAGAGCTTCCCTGTATTC+TGG 0.318216 tig0016871:-22184 None:intergenic
AAGGACTAGACCCTCTTTCT+TGG 0.331410 tig0016871:+21572 Msa1359980:CDS
TCCTCCATCCATGCTTCTTC+AGG 0.333263 tig0016871:+22004 Msa1359980:CDS
CTTAGACTCAATAGAGTTAA+GGG 0.334344 tig0016871:+19335 Msa1359980:CDS
CGTTTCTTTGCAGTTGGAGC+TGG 0.343353 tig0016871:-21879 None:intergenic
GAACCTGTTTATCTTCTCTA+AGG 0.348287 tig0016871:-20266 None:intergenic
CGGTGAAGTTGGAAAGAAAA+TGG 0.348332 tig0016871:+21785 Msa1359980:CDS
TCATAAAACACTCTAACTAT+TGG 0.350307 tig0016871:-22141 None:intergenic
TCCTCCTCTAAAGTCATGTT+TGG 0.350397 tig0016871:+18775 Msa1359980:five_prime_UTR
CTGCAAAGAAACGAAGCTTT+TGG 0.353223 tig0016871:+21889 Msa1359980:CDS
GCGTTCCCATGCAATCTTGC+AGG 0.362108 tig0016871:+20720 Msa1359980:CDS
TCAACGTGATGTTTATTTAA+CGG 0.367109 tig0016871:+19289 Msa1359980:CDS
CACGAGTTGGTTCTGTGGTT+CGG 0.372259 tig0016871:-20681 None:intergenic
TTAACCAAACATGACTTTAG+AGG 0.372299 tig0016871:-18779 None:intergenic
TTCTCAAAAGTGTGGAAAAC+AGG 0.385249 tig0016871:+21752 Msa1359980:CDS
TGTTATGGTGCAACGGGAGC+TGG 0.385807 tig0016871:+20063 Msa1359980:CDS
TCTTAGACTCAATAGAGTTA+AGG 0.385949 tig0016871:+19334 Msa1359980:CDS
TGCATCAATGCTCTTGTAGA+AGG 0.386953 tig0016871:+21026 Msa1359980:CDS
CTAAGGACTAAAGGTCTTCC+AGG 0.387138 tig0016871:-20249 None:intergenic
TTTGTAACGGTTGTTGTGGT+AGG 0.388511 tig0016871:-18981 None:intergenic
TCACCAAATGAGAGGCTACT+TGG 0.390582 tig0016871:-21146 None:intergenic
AAGAGAGGTGTAAGATTTGA+AGG 0.393635 tig0016871:-18731 None:intergenic
CTAGTTGCGTTCTTAATTCA+CGG 0.400944 tig0016871:-21425 None:intergenic
GAAATGTGGGAGCAGGATAA+TGG 0.402234 tig0016871:+19193 Msa1359980:CDS
AAGAAGAGACCGGTTTATAT+TGG 0.405625 tig0016871:-20991 None:intergenic
GTCTGGTCAGTTTCTGTCTC+GGG 0.410116 tig0016871:-21372 None:intergenic
AAAACTCACTCAACTTCTAA+AGG 0.424642 tig0016871:+21076 Msa1359980:CDS
CACAGTACCAAGCATTGTAT+AGG 0.425708 tig0016871:-20091 None:intergenic
CATTGCTTCAACAAGGAAAT+CGG 0.428042 tig0016871:+20656 Msa1359980:CDS
TCCTTCTCCTTCTTATTCAT+CGG 0.428230 tig0016871:-19233 None:intergenic
AGCCCAGTGAACGGTGTTCT+GGG 0.432249 tig0016871:-21171 None:intergenic
AGAGGAAGTTGCCAGAATAC+AGG 0.433741 tig0016871:+22173 Msa1359980:three_prime_UTR
AGGAAGAGATAGGGAAATGT+GGG 0.437555 tig0016871:+19180 Msa1359980:CDS
CTTGGTACTGTGGAGAATCC+AGG 0.440331 tig0016871:+20102 Msa1359980:CDS
GGTCTGGTCAGTTTCTGTCT+CGG 0.441567 tig0016871:-21373 None:intergenic
GCATTAACAAACGGTGAAGT+TGG 0.442999 tig0016871:+21774 Msa1359980:CDS
AGTCCTTAGAGAAGATAAAC+AGG 0.443932 tig0016871:+20263 Msa1359980:CDS
AAACCCAGAACACCGTTCAC+TGG 0.445244 tig0016871:+21168 Msa1359980:CDS
ATTTACATACTCATGGCATC+TGG 0.445338 tig0016871:-22563 None:intergenic
TTGTAACGGTTGTTGTGGTA+GGG 0.445928 tig0016871:-18980 None:intergenic
GTTATAGGGGATTGTGGCGG+CGG 0.449333 tig0016871:+20476 Msa1359980:intron
GAATCTTGGTTAGGTGGTTG+AGG 0.451959 tig0016871:-19017 None:intergenic
GGTTTATATTGGCACCTTCA+AGG 0.453783 tig0016871:-20980 None:intergenic
AACCTCGGAGCTTGTGGAAG+CGG 0.455147 tig0016871:+20011 Msa1359980:CDS
CTTCTAAAGGATTCACTTGG+AGG 0.455166 tig0016871:+21089 Msa1359980:CDS
GATGTTTCATTTACACGAGT+TGG 0.457577 tig0016871:-20694 None:intergenic
AGATAGGGAAATGTGGGAGC+AGG 0.460176 tig0016871:+19186 Msa1359980:CDS
TTATCTTCTCTAAGGACTAA+AGG 0.462908 tig0016871:-20258 None:intergenic
CTGATAGAGCCAAAGAGATT+CGG 0.462956 tig0016871:+21192 Msa1359980:CDS
AGCCCAAGTAGCCTCTCATT+TGG 0.465056 tig0016871:+21143 Msa1359980:CDS
GAGGAAGAGATAGGGAAATG+TGG 0.465347 tig0016871:+19179 Msa1359980:CDS
TCACTAGGTTGGGAAGAAGT+TGG 0.466928 tig0016871:-21543 None:intergenic
TCTTTCACCTTCGCCGGCGC+CGG 0.467394 tig0016871:-19158 None:intergenic
GGTGTAAGATTTGAAGGATG+AGG 0.470766 tig0016871:-18725 None:intergenic
AAGCTTCGTTTCTTTGCAGT+TGG 0.472631 tig0016871:-21885 None:intergenic
GGCTGCTAGCGTACAGGAAA+AGG 0.472765 tig0016871:+21815 Msa1359980:CDS
ATGAACGAGTGTGGAGTGTT+TGG 0.474259 tig0016871:-18693 None:intergenic
GGTTCATCTTTCATATCTTG+AGG 0.480302 tig0016871:+20194 Msa1359980:CDS
ATGCAATTCCGGTGGTTGCT+CGG 0.483500 tig0016871:+19123 Msa1359980:CDS
GATTCACCTGCAAGATTGCA+TGG 0.491831 tig0016871:-20726 None:intergenic
CATCGGCAATTGATCCTCAT+TGG 0.492552 tig0016871:-21349 None:intergenic
GTTTATATTGGCACCTTCAA+GGG 0.493253 tig0016871:-20979 None:intergenic
TTGAGCAGTTGCATAAAAGA+TGG 0.493476 tig0016871:-22229 None:intergenic
AGGTGAAAGAGGAAGAGATA+GGG 0.495803 tig0016871:+19171 Msa1359980:CDS
TTGCAGCTCAAGTACCAGCT+TGG 0.496030 tig0016871:-21394 None:intergenic
ACTAGACCCTCTTTCTTGGC+TGG 0.496094 tig0016871:+21576 Msa1359980:CDS
CCATTTAATGTAGTAACTGA+TGG 0.496299 tig0016871:-21933 None:intergenic
AGTGTGGAGTGTTTGGACTT+TGG 0.499316 tig0016871:-18686 None:intergenic
GTCAGAGATTTGTTGTGCCC+TGG 0.499716 tig0016871:+20231 Msa1359980:CDS
GCTCAAGTACCAGCTTGGTC+TGG 0.500290 tig0016871:-21389 None:intergenic
GAGATTGTCAATGCCGGCGC+CGG 0.502664 tig0016871:+19145 Msa1359980:CDS
GTCAATGCCGGCGCCGGCGA+AGG 0.506294 tig0016871:+19151 Msa1359980:CDS
TTATAGGGGATTGTGGCGGC+GGG 0.507703 tig0016871:+20477 Msa1359980:intron
TTGGAGCTGGTGATCGAAGC+CGG 0.509580 tig0016871:-21866 None:intergenic
AAGGTGAAAGAGGAAGAGAT+AGG 0.511029 tig0016871:+19170 Msa1359980:CDS
CATCAGTTACTACATTAAAT+GGG 0.511094 tig0016871:+21934 Msa1359980:CDS
TTGAAGGTGCCAATATAAAC+CGG 0.512339 tig0016871:+20982 Msa1359980:CDS
GCTGGTACTTGAGCTGCAAA+AGG 0.514295 tig0016871:+21398 Msa1359980:CDS
TCTTTGGAATCTTGGTTAGG+TGG 0.514965 tig0016871:-19023 None:intergenic
TGCTCGGAGATTGTCAATGC+CGG 0.520352 tig0016871:+19139 Msa1359980:CDS
TTGGAAAGAAAATGGCAACT+AGG 0.522469 tig0016871:+21793 Msa1359980:CDS
AATCATAATAATCTCACCGT+TGG 0.523707 tig0016871:+19047 Msa1359980:CDS
ACTCCAGAAATCAAGAAGAA+AGG 0.524128 tig0016871:+21609 Msa1359980:CDS
GGAGGAGGTGCTGTAGCTGT+AGG 0.524604 tig0016871:-21987 None:intergenic
CACCAAATGAGAGGCTACTT+GGG 0.525043 tig0016871:-21145 None:intergenic
TGAAGAGGATTGTGAAGCTA+AGG 0.525463 tig0016871:-21487 None:intergenic
AACTAGGGCTGCTAGCGTAC+AGG 0.525992 tig0016871:+21809 Msa1359980:CDS
AGAGGATATATGAAAGTGGT+GGG 0.526750 tig0016871:-22308 None:intergenic
TTCGTGAATTTACATACTCA+TGG 0.527047 tig0016871:-22570 None:intergenic
TTAATGAGAGTTTGCCCACT+CGG 0.528200 tig0016871:-20902 None:intergenic
TGTGGAGAATCCAGGGGTGA+TGG 0.528795 tig0016871:+20110 Msa1359980:CDS
AGAAGCATGCAAAGGACACT+CGG 0.529688 tig0016871:-22279 None:intergenic
AGAAGGTTGCGGAGTTGAAG+AGG 0.534165 tig0016871:-21502 None:intergenic
TCAGTTTCTGTCTCGGGCAT+CGG 0.534367 tig0016871:-21366 None:intergenic
TCCTTTCTCAAAAGAAATGG+AGG 0.534736 tig0016871:+22417 Msa1359980:intron
AATCTGAGTGAGCTTTGAAA+CGG 0.536931 tig0016871:-18651 None:intergenic
AAGGAGAGGATATATGAAAG+TGG 0.537402 tig0016871:-22312 None:intergenic
GGCTCTATCAGCCCAGTGAA+CGG 0.537977 tig0016871:-21180 None:intergenic
TGGAAAGAAAATGGCAACTA+GGG 0.538257 tig0016871:+21794 Msa1359980:CDS
CAACTTCTAAAGGATTCACT+TGG 0.538719 tig0016871:+21086 Msa1359980:CDS
AGGAGAAGGAATTGAATTCA+CGG 0.540509 tig0016871:+19246 Msa1359980:CDS
ACAACAGACGGTGAAAGCAC+TGG 0.541103 tig0016871:+21656 Msa1359980:CDS
AGCCAAAGAGATTCGGCTGA+AGG 0.541265 tig0016871:+21199 Msa1359980:CDS
AACCCAGAACACCGTTCACT+GGG 0.543004 tig0016871:+21169 Msa1359980:CDS
ATCAGGCAGAGAAGCTGTGA+TGG 0.543916 tig0016871:+20162 Msa1359980:CDS
GAGGAAGTTGCCAGAATACA+GGG 0.545615 tig0016871:+22174 Msa1359980:three_prime_UTR
GTTGTTCGTATAAGAGAGTG+AGG 0.546724 tig0016871:-18902 None:intergenic
TTTGCAGGGGAGGAATGGGT+CGG 0.548849 tig0016871:+20035 Msa1359980:CDS
GACAATCTCCGAGCAACCAC+CGG 0.549147 tig0016871:-19131 None:intergenic
TTTCAGAACCTCGGAGCTTG+TGG 0.550208 tig0016871:+20005 Msa1359980:intron
AAACATGACTTTAGAGGAGG+AGG 0.551096 tig0016871:-18773 None:intergenic
GCTTGTTGCCGAGCAAAACC+AGG 0.552007 tig0016871:-22119 None:intergenic
AGAACACTTAGATCCCTTGA+AGG 0.554006 tig0016871:+20966 Msa1359980:CDS
TCTCATTAATTGATCTTGCA+GGG 0.556486 tig0016871:+20916 Msa1359980:CDS
TGTTTGGACTTTGGATGCAA+CGG 0.558881 tig0016871:-18677 None:intergenic
TGCTGAGTGCAAGAAGAGAC+CGG 0.564164 tig0016871:-21001 None:intergenic
AGTTAGACCGATGAATAAGA+AGG 0.564199 tig0016871:+19226 Msa1359980:CDS
TAGAGCTTCGTCTGCAGATG+AGG 0.565794 tig0016871:+20512 Msa1359980:CDS
ATAGCCAAAACCATCACCCC+TGG 0.566689 tig0016871:-20120 None:intergenic
AGAGTTGCAGCAGAAGGTTG+CGG 0.567442 tig0016871:-21513 None:intergenic
TCTTCCTCTTTCACCTTCGC+CGG 0.568047 tig0016871:-19164 None:intergenic
GGCGCCGGCGAAGGTGAAAG+AGG 0.569093 tig0016871:+19160 Msa1359980:CDS
TCAATTTACCTGAAGAAGCA+TGG 0.570122 tig0016871:-22012 None:intergenic
GTGGAAAGAGTTGCAGCAGA+AGG 0.570800 tig0016871:-21519 None:intergenic
CTATACAATGCTTGGTACTG+TGG 0.571279 tig0016871:+20092 Msa1359980:CDS
TTTACCTGAAGAAGCATGGA+TGG 0.571402 tig0016871:-22008 None:intergenic
ACAAGTTCCAGCCAAGAAAG+AGG 0.572893 tig0016871:-21583 None:intergenic
GATGTAGACACAAATGAGAT+TGG 0.573737 tig0016871:+22455 Msa1359980:three_prime_UTR
CGCGAGGTTTCTCAAAAGTG+TGG 0.574211 tig0016871:+21744 Msa1359980:CDS
GAGAGGATATATGAAAGTGG+TGG 0.578449 tig0016871:-22309 None:intergenic
AGTAACTGATGGACTATGAT+TGG 0.579664 tig0016871:-21922 None:intergenic
GGAAAACAGGCATTAACAAA+CGG 0.585826 tig0016871:+21765 Msa1359980:CDS
TGAAGAGTTTCTATCACGCA+TGG 0.587284 tig0016871:-18955 None:intergenic
ACCGATGAATAAGAAGGAGA+AGG 0.589726 tig0016871:+19232 Msa1359980:CDS
TTGTTGTAGCATCTCTAACT+CGG 0.597605 tig0016871:-20866 None:intergenic
AATCAAGAAGAAAGGAGCTG+AGG 0.597998 tig0016871:+21617 Msa1359980:CDS
ATGAGCATTGTTAACCGAGT+GGG 0.601052 tig0016871:+20888 Msa1359980:CDS
TCTGGAAATACATAACATGT+AGG 0.603352 tig0016871:+18589 None:intergenic
ATTTACACGAGTTGGTTCTG+TGG 0.607906 tig0016871:-20686 None:intergenic
ATGGTGAATTGAAGAGCCAC+CGG 0.608497 tig0016871:+21847 Msa1359980:CDS
CAAGTTCCAGCCAAGAAAGA+GGG 0.610760 tig0016871:-21582 None:intergenic
TGAAGAAGCATGGATGGAGG+AGG 0.610887 tig0016871:-22002 None:intergenic
TTGGTACTGTGGAGAATCCA+GGG 0.613311 tig0016871:+20103 Msa1359980:CDS
TCTAAGTGTTCTTTGATCAG+TGG 0.616194 tig0016871:-20955 None:intergenic
ATAAAAGATGGCCACAGAGG+AGG 0.618002 tig0016871:-22217 None:intergenic
ACCAAACATGACTTTAGAGG+AGG 0.619728 tig0016871:-18776 None:intergenic
CCTTTCTCAAAAGAAATGGA+GGG 0.620003 tig0016871:+22418 Msa1359980:intron
GCTATACTGACTGTGTAGTG+TGG 0.624149 tig0016871:-18613 None:intergenic
AGAAACTGACCAGACCAAGC+TGG 0.626181 tig0016871:+21380 Msa1359980:CDS
GAAGCATGCAAAGGACACTC+GGG 0.631397 tig0016871:-22278 None:intergenic
AGGTGGTTGAGGTAAGACGA+AGG 0.634547 tig0016871:-19006 None:intergenic
TGTGAGGACACTACAACAGA+CGG 0.636603 tig0016871:+21644 Msa1359980:CDS
ATTCACCTGCAAGATTGCAT+GGG 0.637271 tig0016871:-20725 None:intergenic
CAGGAAAAGGAGCCAAACAA+TGG 0.637313 tig0016871:+21828 Msa1359980:CDS
GAAAGATGATCTCATTCGCG+AGG 0.638540 tig0016871:+21728 Msa1359980:CDS
TACAATGCGATCAGATCCAA+CGG 0.639771 tig0016871:-19063 None:intergenic
AACTGATGGACTATGATTGG+TGG 0.640269 tig0016871:-21919 None:intergenic
TCTGGGTTTCACCAAATGAG+AGG 0.641432 tig0016871:-21154 None:intergenic
TTGTTCGTATAAGAGAGTGA+GGG 0.646593 tig0016871:-18901 None:intergenic
AGGTTGGGAAGAAGTTGGAG+TGG 0.647306 tig0016871:-21538 None:intergenic
GTATAAAAGCTCCTCCTCTG+TGG 0.648475 tig0016871:+22206 Msa1359980:three_prime_UTR
ACCTGAAGAAGCATGGATGG+AGG 0.649792 tig0016871:-22005 None:intergenic
ATACACTGAATGAACGAGTG+TGG 0.653520 tig0016871:-18702 None:intergenic
TAAGGACTAAAGGTCTTCCA+GGG 0.654227 tig0016871:-20248 None:intergenic
GAGGATATATGAAAGTGGTG+GGG 0.665512 tig0016871:-22307 None:intergenic
GGGAATGAAGAAGCATGCAA+AGG 0.668350 tig0016871:-22287 None:intergenic
TGCATAAAAGATGGCCACAG+AGG 0.672078 tig0016871:-22220 None:intergenic
GTGATGACATTGCTTCAACA+AGG 0.673502 tig0016871:+20649 Msa1359980:CDS
AACGACTTAAATCCACACCA+TGG 0.674392 tig0016871:+18858 Msa1359980:CDS
GAGCTGGTGATCGAAGCCGG+TGG 0.674759 tig0016871:-21863 None:intergenic
TTTGTTATAGGGGATTGTGG+CGG 0.687919 tig0016871:+20473 Msa1359980:intron
AACCGCTTCCACAAGCTCCG+AGG 0.692675 tig0016871:-20013 None:intergenic
AATGAGCATTGTTAACCGAG+TGG 0.703321 tig0016871:+20887 Msa1359980:CDS
ACAGGTAAGCGACACCAATG+AGG 0.703375 tig0016871:+21335 Msa1359980:intron
ACAGACGGTGAAAGCACTGG+AGG 0.711749 tig0016871:+21659 Msa1359980:CDS
AGAGTTTCTATCACGCATGG+CGG 0.718360 tig0016871:-18952 None:intergenic
TGGTACTGTGGAGAATCCAG+GGG 0.751177 tig0016871:+20104 Msa1359980:CDS
AAGCTGTGATGGAAGCCATG+TGG 0.779143 tig0016871:+20173 Msa1359980:CDS
AAGGAGCTGAGGTAACTGTG+AGG 0.779636 tig0016871:+21628 Msa1359980:CDS
GATATGAAAGATGAACCACA+TGG 0.786269 tig0016871:-20188 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTAAGTTGTAATTT+TGG + tig0016871:20424-20443 Msa1359980:intron 10.0%
!!! ACAATGATTTTTTTTTTTTT+TGG - tig0016871:22490-22509 None:intergenic 10.0%
!! AAAAAAGACATACTAAATTA+AGG - tig0016871:20599-20618 None:intergenic 15.0%
!!! GAGATTATTATGATTTTCTT+TGG - tig0016871:19042-19061 None:intergenic 20.0%
!!! AATTTTTTTTGGATAGGAAA+AGG - tig0016871:19090-19109 None:intergenic 20.0%
!!! TGATGTAATTTTTTTTGGAT+AGG - tig0016871:19096-19115 None:intergenic 20.0%
!!! TTCGTTGATGTAATTTTTTT+TGG - tig0016871:19101-19120 None:intergenic 20.0%
!!! TTCATTTTAATAACGAAAGA+AGG - tig0016871:20293-20312 None:intergenic 20.0%
!! GATATATTTAATGAATAGCT+CGG + tig0016871:20449-20468 Msa1359980:intron 20.0%
!!! TTTTTTTCTTTTTCTTTCTC+TGG + tig0016871:20617-20636 Msa1359980:intron 20.0%
!!! AAATAAATATTAGCTTGACA+TGG - tig0016871:21238-21257 None:intergenic 20.0%
!!! AGCTAATATTTATTTTGTCA+AGG + tig0016871:21243-21262 Msa1359980:intron 20.0%
!!! GCTAATATTTATTTTGTCAA+GGG + tig0016871:21244-21263 Msa1359980:intron 20.0%
!! AACAACGAAAAAGAAAAATA+TGG - tig0016871:22096-22115 None:intergenic 20.0%
!!! TTCATTGATTTTTATGACAT+AGG + tig0016871:22519-22538 Msa1359980:three_prime_UTR 20.0%
!!! TATGATTTTCTTTGGAATCT+TGG - tig0016871:19034-19053 None:intergenic 25.0%
! TCAACGTGATGTTTATTTAA+CGG + tig0016871:19289-19308 Msa1359980:CDS 25.0%
!! TACTCTTAACCTCAATTTTA+AGG - tig0016871:19610-19629 None:intergenic 25.0%
!! TCACATTTTCAAACTATTAC+CGG - tig0016871:19744-19763 None:intergenic 25.0%
! TATATGATCAGTATCATAGA+TGG - tig0016871:19890-19909 None:intergenic 25.0%
! TACTGATCATATAGTTGATT+AGG + tig0016871:19897-19916 Msa1359980:intron 25.0%
! ACTGATCATATAGTTGATTA+GGG + tig0016871:19898-19917 Msa1359980:intron 25.0%
! TGAATACAAAACCAACATAT+AGG - tig0016871:19927-19946 None:intergenic 25.0%
!! TTAGAAGAGTATAACTTTAG+AGG + tig0016871:20556-20575 Msa1359980:intron 25.0%
!! TAGAAGAGTATAACTTTAGA+GGG + tig0016871:20557-20576 Msa1359980:intron 25.0%
!!! GATGTAATTTGTTTTTTGTC+TGG + tig0016871:21310-21329 Msa1359980:intron 25.0%
! CATCAGTTACTACATTAAAT+GGG + tig0016871:21934-21953 Msa1359980:CDS 25.0%
! TCATAAAACACTCTAACTAT+TGG - tig0016871:22144-22163 None:intergenic 25.0%
!!! ATAGTTAGAGTGTTTTATGA+AGG + tig0016871:22144-22163 Msa1359980:exon 25.0%
TTAACCAAACATGACTTTAG+AGG - tig0016871:18782-18801 None:intergenic 30.0%
!!! ATTTTAGATCGAGTTGAAAC+AGG - tig0016871:18828-18847 None:intergenic 30.0%
! TAAGACGAAGGTTTTTGTAA+CGG - tig0016871:18997-19016 None:intergenic 30.0%
!!! TTTTCTTTGGAATCTTGGTT+AGG - tig0016871:19029-19048 None:intergenic 30.0%
AATCATAATAATCTCACCGT+TGG + tig0016871:19047-19066 Msa1359980:CDS 30.0%
ATCAACGAAAAATGCAATTC+CGG + tig0016871:19112-19131 Msa1359980:CDS 30.0%
TCTTAGACTCAATAGAGTTA+AGG + tig0016871:19334-19353 Msa1359980:CDS 30.0%
CTTAGACTCAATAGAGTTAA+GGG + tig0016871:19335-19354 Msa1359980:CDS 30.0%
!!! CGTATTTGCATTTGTTGTTT+TGG + tig0016871:19497-19516 Msa1359980:intron 30.0%
ATGATGTGTCCTTAAAATTG+AGG + tig0016871:19598-19617 Msa1359980:intron 30.0%
GTTAGACACTAAACATTTGT+TGG + tig0016871:19803-19822 Msa1359980:intron 30.0%
! TTTAGAGGTGTGTTGTATAT+AGG + tig0016871:19966-19985 Msa1359980:intron 30.0%
! TTGGCTATTAAGGATCTTTT+TGG + tig0016871:20135-20154 Msa1359980:CDS 30.0%
!! AGGATCTTTTTGGTAAAATC+AGG + tig0016871:20145-20164 Msa1359980:CDS 30.0%
! TTATCTTCTCTAAGGACTAA+AGG - tig0016871:20261-20280 None:intergenic 30.0%
!!! AATAGCTCGGTTTTGTTATA+GGG + tig0016871:20462-20481 Msa1359980:intron 30.0%
! TGAATCATTTCGGATTTTGA+GGG + tig0016871:20743-20762 Msa1359980:intron 30.0%
CTCACAATCACAACATTAAA+TGG - tig0016871:20779-20798 None:intergenic 30.0%
GTAACAAAACAATGTGCATT+TGG - tig0016871:20826-20845 None:intergenic 30.0%
!! CACATTGTTTTGTTACATCT+AGG + tig0016871:20830-20849 Msa1359980:intron 30.0%
TCTCATTAATTGATCTTGCA+GGG + tig0016871:20916-20935 Msa1359980:CDS 30.0%
!!! GTGAGTTTTGAATTTCGATA+CGG - tig0016871:21065-21084 None:intergenic 30.0%
AAAACTCACTCAACTTCTAA+AGG + tig0016871:21076-21095 Msa1359980:CDS 30.0%
! AATATTAGCTTGACATGGTA+CGG - tig0016871:21233-21252 None:intergenic 30.0%
!!! TTTGTTTTTTGTCTGGATAC+AGG + tig0016871:21317-21336 Msa1359980:intron 30.0%
CCATTTAATGTAGTAACTGA+TGG - tig0016871:21936-21955 None:intergenic 30.0%
CCATCAGTTACTACATTAAA+TGG + tig0016871:21933-21952 Msa1359980:CDS 30.0%
ATATGGTCAACTAGATGTTT+CGG - tig0016871:22079-22098 None:intergenic 30.0%
GTGTCTACATCTCAAATAAA+TGG - tig0016871:22359-22378 None:intergenic 30.0%
AGATGATATATGAAAGTGGT+GGG - tig0016871:22398-22417 None:intergenic 30.0%
AAGGAGATGATATATGAAAG+TGG - tig0016871:22402-22421 None:intergenic 30.0%
ATCTCCTTTCTCAAAAGAAA+TGG + tig0016871:22414-22433 Msa1359980:intron 30.0%
GTGTCTACATCTCAAATAAA+TGG - tig0016871:22359-22378 None:intergenic 30.0%
TTCGTGAATTTACATACTCA+TGG - tig0016871:22573-22592 None:intergenic 30.0%
!! AATCTGAGTGAGCTTTGAAA+CGG - tig0016871:18654-18673 None:intergenic 35.0%
! AAGAGAGGTGTAAGATTTGA+AGG - tig0016871:18734-18753 None:intergenic 35.0%
AGAAGAAGAAGAAGAAAGAG+AGG - tig0016871:18749-18768 None:intergenic 35.0%
!! GTGTGGATTTAAGTCGTTTT+CGG - tig0016871:18856-18875 None:intergenic 35.0%
! TGAGTTTTTCTTTGAGTCCA+TGG - tig0016871:18878-18897 None:intergenic 35.0%
TTGTTCGTATAAGAGAGTGA+GGG - tig0016871:18904-18923 None:intergenic 35.0%
AGTTAGACCGATGAATAAGA+AGG + tig0016871:19226-19245 Msa1359980:CDS 35.0%
TCCTTCTCCTTCTTATTCAT+CGG - tig0016871:19236-19255 None:intergenic 35.0%
AGGAGAAGGAATTGAATTCA+CGG + tig0016871:19246-19265 Msa1359980:CDS 35.0%
AGTTATGAGAGTGATCAATG+TGG + tig0016871:19533-19552 Msa1359980:intron 35.0%
TGTGTATGTGTCTCTATCAA+TGG - tig0016871:19690-19709 None:intergenic 35.0%
! GATTAGGGTATCCTATATGT+TGG + tig0016871:19913-19932 Msa1359980:intron 35.0%
!!! TCAGCTTTTTTTCAGAACCT+CGG + tig0016871:19996-20015 Msa1359980:intron 35.0%
GGAAAAACCTATACAATGCT+TGG + tig0016871:20084-20103 Msa1359980:CDS 35.0%
GATATGAAAGATGAACCACA+TGG - tig0016871:20191-20210 None:intergenic 35.0%
GGTTCATCTTTCATATCTTG+AGG + tig0016871:20194-20213 Msa1359980:CDS 35.0%
AGTCCTTAGAGAAGATAAAC+AGG + tig0016871:20263-20282 Msa1359980:CDS 35.0%
GAACCTGTTTATCTTCTCTA+AGG - tig0016871:20269-20288 None:intergenic 35.0%
!!! GAATAGCTCGGTTTTGTTAT+AGG + tig0016871:20461-20480 Msa1359980:intron 35.0%
!!! ATAGCTCGGTTTTGTTATAG+GGG + tig0016871:20463-20482 Msa1359980:intron 35.0%
CATTGCTTCAACAAGGAAAT+CGG + tig0016871:20656-20675 Msa1359980:CDS 35.0%
GATGTTTCATTTACACGAGT+TGG - tig0016871:20697-20716 None:intergenic 35.0%
ATCTTGCAGGTGAATCATTT+CGG + tig0016871:20733-20752 Msa1359980:intron 35.0%
! GTGAATCATTTCGGATTTTG+AGG + tig0016871:20742-20761 Msa1359980:intron 35.0%
! GAATCATTTCGGATTTTGAG+GGG + tig0016871:20744-20763 Msa1359980:intron 35.0%
!! GTTTTGTTACATCTAGGTTG+TGG + tig0016871:20836-20855 Msa1359980:intron 35.0%
TTGTTGTAGCATCTCTAACT+CGG - tig0016871:20869-20888 None:intergenic 35.0%
CTCTCATTAATTGATCTTGC+AGG + tig0016871:20915-20934 Msa1359980:CDS 35.0%
TCTAAGTGTTCTTTGATCAG+TGG - tig0016871:20958-20977 None:intergenic 35.0%
GTTTATATTGGCACCTTCAA+GGG - tig0016871:20982-21001 None:intergenic 35.0%
!! TTGAAGGTGCCAATATAAAC+CGG + tig0016871:20982-21001 Msa1359980:CDS 35.0%
! AAGAAGAGACCGGTTTATAT+TGG - tig0016871:20994-21013 None:intergenic 35.0%
! CAACTTCTAAAGGATTCACT+TGG + tig0016871:21086-21105 Msa1359980:CDS 35.0%
! ATATTAGCTTGACATGGTAC+GGG - tig0016871:21232-21251 None:intergenic 35.0%
!! TTATTTTGTCAAGGGCCTTA+TGG + tig0016871:21252-21271 Msa1359980:intron 35.0%
CTAGTTGCGTTCTTAATTCA+CGG - tig0016871:21428-21447 None:intergenic 35.0%
ACTCCAGAAATCAAGAAGAA+AGG + tig0016871:21609-21628 Msa1359980:CDS 35.0%
! TTCTCAAAAGTGTGGAAAAC+AGG + tig0016871:21752-21771 Msa1359980:CDS 35.0%
GGAAAACAGGCATTAACAAA+CGG + tig0016871:21765-21784 Msa1359980:CDS 35.0%
TTGGAAAGAAAATGGCAACT+AGG + tig0016871:21793-21812 Msa1359980:CDS 35.0%
TGGAAAGAAAATGGCAACTA+GGG + tig0016871:21794-21813 Msa1359980:CDS 35.0%
CTCTTCAATTCACCATTGTT+TGG - tig0016871:21843-21862 None:intergenic 35.0%
! TGCAAAGAAACGAAGCTTTT+GGG + tig0016871:21890-21909 Msa1359980:CDS 35.0%
!! AGTAACTGATGGACTATGAT+TGG - tig0016871:21925-21944 None:intergenic 35.0%
! TTCTGAAAGTACATGACTTC+TGG - tig0016871:21967-21986 None:intergenic 35.0%
TCAATTTACCTGAAGAAGCA+TGG - tig0016871:22015-22034 None:intergenic 35.0%
!! TAGAGTGTTTTATGAAGGAG+TGG + tig0016871:22149-22168 Msa1359980:exon 35.0%
TTGAGCAGTTGCATAAAAGA+TGG - tig0016871:22232-22251 None:intergenic 35.0%
! TCTTTTATGCAACTGCTCAA+AGG + tig0016871:22232-22251 Msa1359980:three_prime_UTR 35.0%
AGAGGATATATGAAAGTGGT+GGG - tig0016871:22311-22330 None:intergenic 35.0%
AAGGAGAGGATATATGAAAG+TGG - tig0016871:22315-22334 None:intergenic 35.0%
!! CATTTCTTTTGAGAAAGGAG+AGG - tig0016871:22329-22348 None:intergenic 35.0%
CTCTCCTTTCTCAAAAGAAA+TGG + tig0016871:22327-22346 Msa1359980:intron 35.0%
TCCTTTCTCAAAAGAAATGG+AGG + tig0016871:22330-22349 Msa1359980:intron 35.0%
CCTTTCTCAAAAGAAATGGA+GGG + tig0016871:22331-22350 Msa1359980:intron 35.0%
GATGATATATGAAAGTGGTG+GGG - tig0016871:22397-22416 None:intergenic 35.0%
GAGATGATATATGAAAGTGG+TGG - tig0016871:22399-22418 None:intergenic 35.0%
TCCTTTCTCAAAAGAAATGG+AGG + tig0016871:22330-22349 Msa1359980:intron 35.0%
CCTTTCTCAAAAGAAATGGA+GGG + tig0016871:22331-22350 Msa1359980:intron 35.0%
GATGTAGACACAAATGAGAT+TGG + tig0016871:22455-22474 Msa1359980:three_prime_UTR 35.0%
ATTTACATACTCATGGCATC+TGG - tig0016871:22566-22585 None:intergenic 35.0%
TGTTTGGACTTTGGATGCAA+CGG - tig0016871:18680-18699 None:intergenic 40.0%
ATACACTGAATGAACGAGTG+TGG - tig0016871:18705-18724 None:intergenic 40.0%
GGTGTAAGATTTGAAGGATG+AGG - tig0016871:18728-18747 None:intergenic 40.0%
! AAACATGACTTTAGAGGAGG+AGG - tig0016871:18776-18795 None:intergenic 40.0%
!! TCCTCCTCTAAAGTCATGTT+TGG + tig0016871:18775-18794 Msa1359980:five_prime_UTR 40.0%
! ACCAAACATGACTTTAGAGG+AGG - tig0016871:18779-18798 None:intergenic 40.0%
!! TGGATTTAAGTCGTTTTCGG+AGG - tig0016871:18853-18872 None:intergenic 40.0%
AACGACTTAAATCCACACCA+TGG + tig0016871:18858-18877 Msa1359980:CDS 40.0%
! TTTTCTTTGAGTCCATGGTG+TGG - tig0016871:18873-18892 None:intergenic 40.0%
GTTGTTCGTATAAGAGAGTG+AGG - tig0016871:18905-18924 None:intergenic 40.0%
TGAAGAGTTTCTATCACGCA+TGG - tig0016871:18958-18977 None:intergenic 40.0%
TTGTAACGGTTGTTGTGGTA+GGG - tig0016871:18983-19002 None:intergenic 40.0%
TTTGTAACGGTTGTTGTGGT+AGG - tig0016871:18984-19003 None:intergenic 40.0%
! GGTTTTTGTAACGGTTGTTG+TGG - tig0016871:18988-19007 None:intergenic 40.0%
!! TCTTTGGAATCTTGGTTAGG+TGG - tig0016871:19026-19045 None:intergenic 40.0%
TACAATGCGATCAGATCCAA+CGG - tig0016871:19066-19085 None:intergenic 40.0%
AACGAAAAATGCAATTCCGG+TGG + tig0016871:19115-19134 Msa1359980:CDS 40.0%
AAGGTGAAAGAGGAAGAGAT+AGG + tig0016871:19170-19189 Msa1359980:CDS 40.0%
AGGTGAAAGAGGAAGAGATA+GGG + tig0016871:19171-19190 Msa1359980:CDS 40.0%
AGGAAGAGATAGGGAAATGT+GGG + tig0016871:19180-19199 Msa1359980:CDS 40.0%
ACCGATGAATAAGAAGGAGA+AGG + tig0016871:19232-19251 Msa1359980:CDS 40.0%
AGACACAAACAAATCGACAC+CGG + tig0016871:19722-19741 Msa1359980:intron 40.0%
ATAGATGGCAACCATGTGAT+CGG - tig0016871:19875-19894 None:intergenic 40.0%
! TGATGATGCTGTGTCTTTAG+AGG + tig0016871:19951-19970 Msa1359980:intron 40.0%
!! AATGGGTCGGTTTTCTGTTA+TGG + tig0016871:20048-20067 Msa1359980:CDS 40.0%
! GGTTTTCTGTTATGGTGCAA+CGG + tig0016871:20056-20075 Msa1359980:CDS 40.0%
! GTTTTCTGTTATGGTGCAAC+GGG + tig0016871:20057-20076 Msa1359980:CDS 40.0%
! CACAGTACCAAGCATTGTAT+AGG - tig0016871:20094-20113 None:intergenic 40.0%
CTATACAATGCTTGGTACTG+TGG + tig0016871:20092-20111 Msa1359980:CDS 40.0%
!!! GGTGATGGTTTTGGCTATTA+AGG + tig0016871:20125-20144 Msa1359980:CDS 40.0%
TAAGGACTAAAGGTCTTCCA+GGG - tig0016871:20251-20270 None:intergenic 40.0%
!!! GGTTTTGTTATAGGGGATTG+TGG + tig0016871:20470-20489 Msa1359980:intron 40.0%
! TTTGTTATAGGGGATTGTGG+CGG + tig0016871:20473-20492 Msa1359980:intron 40.0%
TTTCTTTCTCTGGTTGCTTC+AGG + tig0016871:20627-20646 Msa1359980:intron 40.0%
GTGATGACATTGCTTCAACA+AGG + tig0016871:20649-20668 Msa1359980:CDS 40.0%
!! ATTTACACGAGTTGGTTCTG+TGG - tig0016871:20689-20708 None:intergenic 40.0%
ATTCACCTGCAAGATTGCAT+GGG - tig0016871:20728-20747 None:intergenic 40.0%
! AATGAGCATTGTTAACCGAG+TGG + tig0016871:20887-20906 Msa1359980:CDS 40.0%
! ATGAGCATTGTTAACCGAGT+GGG + tig0016871:20888-20907 Msa1359980:CDS 40.0%
TTAATGAGAGTTTGCCCACT+CGG - tig0016871:20905-20924 None:intergenic 40.0%
AGAACACTTAGATCCCTTGA+AGG + tig0016871:20966-20985 Msa1359980:CDS 40.0%
GGTTTATATTGGCACCTTCA+AGG - tig0016871:20983-21002 None:intergenic 40.0%
TGCATCAATGCTCTTGTAGA+AGG + tig0016871:21026-21045 Msa1359980:CDS 40.0%
! CTTCTAAAGGATTCACTTGG+AGG + tig0016871:21089-21108 Msa1359980:CDS 40.0%
CTGATAGAGCCAAAGAGATT+CGG + tig0016871:21192-21211 Msa1359980:CDS 40.0%
! TATTAGCTTGACATGGTACG+GGG - tig0016871:21231-21250 None:intergenic 40.0%
CATGTCAAGCTTATGCCATA+AGG - tig0016871:21270-21289 None:intergenic 40.0%
TGAAGAGGATTGTGAAGCTA+AGG - tig0016871:21490-21509 None:intergenic 40.0%
!! CCTTCGTTTTTCACTAGGTT+GGG - tig0016871:21556-21575 None:intergenic 40.0%
!! TCCTTCGTTTTTCACTAGGT+TGG - tig0016871:21557-21576 None:intergenic 40.0%
!! CTAGTCCTTCGTTTTTCACT+AGG - tig0016871:21561-21580 None:intergenic 40.0%
GCTCCTTTCTTCTTGATTTC+TGG - tig0016871:21615-21634 None:intergenic 40.0%
AATCAAGAAGAAAGGAGCTG+AGG + tig0016871:21617-21636 Msa1359980:CDS 40.0%
GCATTAACAAACGGTGAAGT+TGG + tig0016871:21774-21793 Msa1359980:CDS 40.0%
CGGTGAAGTTGGAAAGAAAA+TGG + tig0016871:21785-21804 Msa1359980:CDS 40.0%
AAGCTTCGTTTCTTTGCAGT+TGG - tig0016871:21888-21907 None:intergenic 40.0%
! CTGCAAAGAAACGAAGCTTT+TGG + tig0016871:21889-21908 Msa1359980:CDS 40.0%
!! AACTGATGGACTATGATTGG+TGG - tig0016871:21922-21941 None:intergenic 40.0%
! TTTACCTGAAGAAGCATGGA+TGG - tig0016871:22011-22030 None:intergenic 40.0%
GGTTACTTGCTTGGTAAGTA+AGG - tig0016871:22058-22077 None:intergenic 40.0%
AGATGTTTCGGTTACTTGCT+TGG - tig0016871:22067-22086 None:intergenic 40.0%
!! TTCTTTTTCGTTGTTCAGCC+TGG + tig0016871:22101-22120 Msa1359980:intron 40.0%
! GTTTTATGAAGGAGTGGAAG+AGG + tig0016871:22155-22174 Msa1359980:three_prime_UTR 40.0%
GAGGATATATGAAAGTGGTG+GGG - tig0016871:22310-22329 None:intergenic 40.0%
GAGAGGATATATGAAAGTGG+TGG - tig0016871:22312-22331 None:intergenic 40.0%
!! CCCTCCATTTCTTTTGAGAA+AGG - tig0016871:22334-22353 None:intergenic 40.0%
!! CCCTCCATTTCTTTTGAGAA+AGG - tig0016871:22334-22353 None:intergenic 40.0%
! GCTATACTGACTGTGTAGTG+TGG - tig0016871:18616-18635 None:intergenic 45.0%
! AGTGTGGAGTGTTTGGACTT+TGG - tig0016871:18689-18708 None:intergenic 45.0%
! ATGAACGAGTGTGGAGTGTT+TGG - tig0016871:18696-18715 None:intergenic 45.0%
AGAGTTTCTATCACGCATGG+CGG - tig0016871:18955-18974 None:intergenic 45.0%
GAATCTTGGTTAGGTGGTTG+AGG - tig0016871:19020-19039 None:intergenic 45.0%
GAGGAAGAGATAGGGAAATG+TGG + tig0016871:19179-19198 Msa1359980:CDS 45.0%
GAAATGTGGGAGCAGGATAA+TGG + tig0016871:19193-19212 Msa1359980:CDS 45.0%
! AAACATTTGTTGGACACCGC+CGG + tig0016871:19813-19832 Msa1359980:intron 45.0%
TGCTACATAAGCCGATCACA+TGG + tig0016871:19861-19880 Msa1359980:intron 45.0%
TTGGTACTGTGGAGAATCCA+GGG + tig0016871:20103-20122 Msa1359980:CDS 45.0%
CTAAGGACTAAAGGTCTTCC+AGG - tig0016871:20252-20271 None:intergenic 45.0%
GATTCACCTGCAAGATTGCA+TGG - tig0016871:20729-20748 None:intergenic 45.0%
CACCAAATGAGAGGCTACTT+GGG - tig0016871:21148-21167 None:intergenic 45.0%
TCACCAAATGAGAGGCTACT+TGG - tig0016871:21149-21168 None:intergenic 45.0%
TCTGGGTTTCACCAAATGAG+AGG - tig0016871:21157-21176 None:intergenic 45.0%
AACCTTCAGCCGAATCTCTT+TGG - tig0016871:21204-21223 None:intergenic 45.0%
CATCGGCAATTGATCCTCAT+TGG - tig0016871:21352-21371 None:intergenic 45.0%
! TCACTAGGTTGGGAAGAAGT+TGG - tig0016871:21546-21565 None:intergenic 45.0%
CCCAACCTAGTGAAAAACGA+AGG + tig0016871:21553-21572 Msa1359980:CDS 45.0%
AAGGACTAGACCCTCTTTCT+TGG + tig0016871:21572-21591 Msa1359980:CDS 45.0%
CAAGTTCCAGCCAAGAAAGA+GGG - tig0016871:21585-21604 None:intergenic 45.0%
ACAAGTTCCAGCCAAGAAAG+AGG - tig0016871:21586-21605 None:intergenic 45.0%
TGTGAGGACACTACAACAGA+CGG + tig0016871:21644-21663 Msa1359980:CDS 45.0%
GAAAGATGATCTCATTCGCG+AGG + tig0016871:21728-21747 Msa1359980:CDS 45.0%
CAGGAAAAGGAGCCAAACAA+TGG + tig0016871:21828-21847 Msa1359980:CDS 45.0%
ATGGTGAATTGAAGAGCCAC+CGG + tig0016871:21847-21866 Msa1359980:CDS 45.0%
TGGTAAGTAAGGAACGAGGA+AGG - tig0016871:22047-22066 None:intergenic 45.0%
TGCTTGGTAAGTAAGGAACG+AGG - tig0016871:22051-22070 None:intergenic 45.0%
!!! TTGTTCAGCCTGGTTTTGCT+CGG + tig0016871:22111-22130 Msa1359980:intron 45.0%
AGAGGAAGTTGCCAGAATAC+AGG + tig0016871:22173-22192 Msa1359980:three_prime_UTR 45.0%
GAGGAAGTTGCCAGAATACA+GGG + tig0016871:22174-22193 Msa1359980:three_prime_UTR 45.0%
GTATAAAAGCTCCTCCTCTG+TGG + tig0016871:22206-22225 Msa1359980:three_prime_UTR 45.0%
ATAAAAGATGGCCACAGAGG+AGG - tig0016871:22220-22239 None:intergenic 45.0%
TGCATAAAAGATGGCCACAG+AGG - tig0016871:22223-22242 None:intergenic 45.0%
! AGAAGCATGCAAAGGACACT+CGG - tig0016871:22282-22301 None:intergenic 45.0%
! GGGAATGAAGAAGCATGCAA+AGG - tig0016871:22290-22309 None:intergenic 45.0%
AGGTGGTTGAGGTAAGACGA+AGG - tig0016871:19009-19028 None:intergenic 50.0%
ATGCAATTCCGGTGGTTGCT+CGG + tig0016871:19123-19142 Msa1359980:CDS 50.0%
TGCTCGGAGATTGTCAATGC+CGG + tig0016871:19139-19158 Msa1359980:CDS 50.0%
TCTTCCTCTTTCACCTTCGC+CGG - tig0016871:19167-19186 None:intergenic 50.0%
AGATAGGGAAATGTGGGAGC+AGG + tig0016871:19186-19205 Msa1359980:CDS 50.0%
! CTTCGGATTGAAGGTGTGTC+CGG - tig0016871:19835-19854 None:intergenic 50.0%
ACACCTTCAATCCGAAGTGC+CGG + tig0016871:19838-19857 Msa1359980:intron 50.0%
!! CTTATGTAGCACCGGCACTT+CGG - tig0016871:19852-19871 None:intergenic 50.0%
! GTGATCGGCTTATGTAGCAC+CGG - tig0016871:19860-19879 None:intergenic 50.0%
TTTCAGAACCTCGGAGCTTG+TGG + tig0016871:20005-20024 Msa1359980:intron 50.0%
! CTTGTGGAAGCGGTTTTGCA+GGG + tig0016871:20021-20040 Msa1359980:CDS 50.0%
! TTGTGGAAGCGGTTTTGCAG+GGG + tig0016871:20022-20041 Msa1359980:CDS 50.0%
CTTGGTACTGTGGAGAATCC+AGG + tig0016871:20102-20121 Msa1359980:CDS 50.0%
TGGTACTGTGGAGAATCCAG+GGG + tig0016871:20104-20123 Msa1359980:CDS 50.0%
!! GAATCCAGGGGTGATGGTTT+TGG + tig0016871:20116-20135 Msa1359980:CDS 50.0%
ATAGCCAAAACCATCACCCC+TGG - tig0016871:20123-20142 None:intergenic 50.0%
ATCAGGCAGAGAAGCTGTGA+TGG + tig0016871:20162-20181 Msa1359980:CDS 50.0%
! AAGCTGTGATGGAAGCCATG+TGG + tig0016871:20173-20192 Msa1359980:CDS 50.0%
!! GTCAGAGATTTGTTGTGCCC+TGG + tig0016871:20231-20250 Msa1359980:CDS 50.0%
TAGAGCTTCGTCTGCAGATG+AGG + tig0016871:20512-20531 Msa1359980:CDS 50.0%
!! CACGAGTTGGTTCTGTGGTT+CGG - tig0016871:20684-20703 None:intergenic 50.0%
TGCTGAGTGCAAGAAGAGAC+CGG - tig0016871:21004-21023 None:intergenic 50.0%
AGCCCAAGTAGCCTCTCATT+TGG + tig0016871:21143-21162 Msa1359980:CDS 50.0%
AAACCCAGAACACCGTTCAC+TGG + tig0016871:21168-21187 Msa1359980:CDS 50.0%
AACCCAGAACACCGTTCACT+GGG + tig0016871:21169-21188 Msa1359980:CDS 50.0%
AGCCAAAGAGATTCGGCTGA+AGG + tig0016871:21199-21218 Msa1359980:CDS 50.0%
ACAGGTAAGCGACACCAATG+AGG + tig0016871:21335-21354 Msa1359980:intron 50.0%
TCAGTTTCTGTCTCGGGCAT+CGG - tig0016871:21369-21388 None:intergenic 50.0%
GTCTGGTCAGTTTCTGTCTC+GGG - tig0016871:21375-21394 None:intergenic 50.0%
GGTCTGGTCAGTTTCTGTCT+CGG - tig0016871:21376-21395 None:intergenic 50.0%
AGAAACTGACCAGACCAAGC+TGG + tig0016871:21380-21399 Msa1359980:CDS 50.0%
TTGCAGCTCAAGTACCAGCT+TGG - tig0016871:21397-21416 None:intergenic 50.0%
GCTGGTACTTGAGCTGCAAA+AGG + tig0016871:21398-21417 Msa1359980:CDS 50.0%
AGAAGGTTGCGGAGTTGAAG+AGG - tig0016871:21505-21524 None:intergenic 50.0%
AGAGTTGCAGCAGAAGGTTG+CGG - tig0016871:21516-21535 None:intergenic 50.0%
GTGGAAAGAGTTGCAGCAGA+AGG - tig0016871:21522-21541 None:intergenic 50.0%
AGGTTGGGAAGAAGTTGGAG+TGG - tig0016871:21541-21560 None:intergenic 50.0%
ACTAGACCCTCTTTCTTGGC+TGG + tig0016871:21576-21595 Msa1359980:CDS 50.0%
AAGGAGCTGAGGTAACTGTG+AGG + tig0016871:21628-21647 Msa1359980:CDS 50.0%
! ACAACAGACGGTGAAAGCAC+TGG + tig0016871:21656-21675 Msa1359980:CDS 50.0%
CGCGAGGTTTCTCAAAAGTG+TGG + tig0016871:21744-21763 Msa1359980:CDS 50.0%
CGTTTCTTTGCAGTTGGAGC+TGG - tig0016871:21882-21901 None:intergenic 50.0%
! TGAAGAAGCATGGATGGAGG+AGG - tig0016871:22005-22024 None:intergenic 50.0%
TCCTCCATCCATGCTTCTTC+AGG + tig0016871:22004-22023 Msa1359980:CDS 50.0%
! ACCTGAAGAAGCATGGATGG+AGG - tig0016871:22008-22027 None:intergenic 50.0%
CACAGAGCTTCCCTGTATTC+TGG - tig0016871:22187-22206 None:intergenic 50.0%
GAAGCATGCAAAGGACACTC+GGG - tig0016871:22281-22300 None:intergenic 50.0%
GACAATCTCCGAGCAACCAC+CGG - tig0016871:19134-19153 None:intergenic 55.0%
AACCTCGGAGCTTGTGGAAG+CGG + tig0016871:20011-20030 Msa1359980:CDS 55.0%
! GCTTGTGGAAGCGGTTTTGC+AGG + tig0016871:20020-20039 Msa1359980:CDS 55.0%
! CGGTTTTGCAGGGGAGGAAT+GGG + tig0016871:20031-20050 Msa1359980:CDS 55.0%
TTTGCAGGGGAGGAATGGGT+CGG + tig0016871:20035-20054 Msa1359980:CDS 55.0%
TGTTATGGTGCAACGGGAGC+TGG + tig0016871:20063-20082 Msa1359980:CDS 55.0%
TGTGGAGAATCCAGGGGTGA+TGG + tig0016871:20110-20129 Msa1359980:CDS 55.0%
GTTATAGGGGATTGTGGCGG+CGG + tig0016871:20476-20495 Msa1359980:intron 55.0%
TTATAGGGGATTGTGGCGGC+GGG + tig0016871:20477-20496 Msa1359980:intron 55.0%
GCGTTCCCATGCAATCTTGC+AGG + tig0016871:20720-20739 Msa1359980:CDS 55.0%
AGCCCAGTGAACGGTGTTCT+GGG - tig0016871:21174-21193 None:intergenic 55.0%
GGCTCTATCAGCCCAGTGAA+CGG - tig0016871:21183-21202 None:intergenic 55.0%
GCTCAAGTACCAGCTTGGTC+TGG - tig0016871:21392-21411 None:intergenic 55.0%
!! ACAGACGGTGAAAGCACTGG+AGG + tig0016871:21659-21678 Msa1359980:CDS 55.0%
AACTAGGGCTGCTAGCGTAC+AGG + tig0016871:21809-21828 Msa1359980:CDS 55.0%
GGCTGCTAGCGTACAGGAAA+AGG + tig0016871:21815-21834 Msa1359980:CDS 55.0%
TTGGAGCTGGTGATCGAAGC+CGG - tig0016871:21869-21888 None:intergenic 55.0%
! GCTTGTTGCCGAGCAAAACC+AGG - tig0016871:22122-22141 None:intergenic 55.0%
GAGATTGTCAATGCCGGCGC+CGG + tig0016871:19145-19164 Msa1359980:CDS 60.0%
! CGGATTGAAGGTGTGTCCGG+CGG - tig0016871:19832-19851 None:intergenic 60.0%
! GCACCGGCACTTCGGATTGA+AGG - tig0016871:19844-19863 None:intergenic 60.0%
AACCGCTTCCACAAGCTCCG+AGG - tig0016871:20016-20035 None:intergenic 60.0%
! TGGAAGCGGTTTTGCAGGGG+AGG + tig0016871:20025-20044 Msa1359980:CDS 60.0%
! GCGGTTTTGCAGGGGAGGAA+TGG + tig0016871:20030-20049 Msa1359980:CDS 60.0%
CAGCCCAGTGAACGGTGTTC+TGG - tig0016871:21175-21194 None:intergenic 60.0%
!! GGAGGAGGTGCTGTAGCTGT+AGG - tig0016871:21990-22009 None:intergenic 60.0%
TCTTTCACCTTCGCCGGCGC+CGG - tig0016871:19161-19180 None:intergenic 65.0%
GAGCTGGTGATCGAAGCCGG+TGG - tig0016871:21866-21885 None:intergenic 65.0%
!! GGCGCCGGCGAAGGTGAAAG+AGG + tig0016871:19160-19179 Msa1359980:CDS 70.0%
!! GTCAATGCCGGCGCCGGCGA+AGG + tig0016871:19151-19170 Msa1359980:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0016871 gene 18592 22608 18592 ID=Msa1359980;Name=Msa1359980
tig0016871 mRNA 18592 22608 18592 ID=Msa1359980-mRNA-1;Parent=Msa1359980;Name=Msa1359980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=230|1|1|1|0.85|0.75|8|369|702
tig0016871 exon 18592 19423 18592 ID=Msa1359980-mRNA-1:exon:11638;Parent=Msa1359980-mRNA-1
tig0016871 exon 20011 20284 20011 ID=Msa1359980-mRNA-1:exon:11639;Parent=Msa1359980-mRNA-1
tig0016871 exon 20483 20533 20483 ID=Msa1359980-mRNA-1:exon:11640;Parent=Msa1359980-mRNA-1
tig0016871 exon 20649 20741 20649 ID=Msa1359980-mRNA-1:exon:11641;Parent=Msa1359980-mRNA-1
tig0016871 exon 20852 21220 20852 ID=Msa1359980-mRNA-1:exon:11642;Parent=Msa1359980-mRNA-1
tig0016871 exon 21339 22025 21339 ID=Msa1359980-mRNA-1:exon:11643;Parent=Msa1359980-mRNA-1
tig0016871 exon 22119 22342 22119 ID=Msa1359980-mRNA-1:exon:11644;Parent=Msa1359980-mRNA-1
tig0016871 exon 22431 22608 22431 ID=Msa1359980-mRNA-1:exon:11645;Parent=Msa1359980-mRNA-1
tig0016871 five_prime_UTR 18592 18821 18592 ID=Msa1359980-mRNA-1:five_prime_utr;Parent=Msa1359980-mRNA-1
tig0016871 CDS 18822 19423 18822 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 CDS 20011 20284 20011 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 CDS 20483 20533 20483 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 CDS 20649 20741 20649 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 CDS 20852 21220 20852 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 CDS 21339 22025 21339 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 CDS 22119 22151 22119 ID=Msa1359980-mRNA-1:cds;Parent=Msa1359980-mRNA-1
tig0016871 three_prime_UTR 22152 22342 22152 ID=Msa1359980-mRNA-1:three_prime_utr;Parent=Msa1359980-mRNA-1
tig0016871 three_prime_UTR 22431 22608 22431 ID=Msa1359980-mRNA-1:three_prime_utr;Parent=Msa1359980-mRNA-1
Gene Sequence

>Msa1359980

ATGCCTGTTTCAACTCGATCTAAAATCACCTCCGAAAACGACTTAAATCCACACCATGGACTCAAAGAAAAACTCAAAACCCTCACTCTCTTATACGAACAACAAAAACAACAATCTTCTAAATCTCTCACCGCCATGCGTGATAGAAACTCTTCAATCCCTACCACAACAACCGTTACAAAAACCTTCGTCTTACCTCAACCACCTAACCAAGATTCCAAAGAAAATCATAATAATCTCACCGTTGGATCTGATCGCATTGTAGCCTTTTCCTATCCAAAAAAAATTACATCAACGAAAAATGCAATTCCGGTGGTTGCTCGGAGATTGTCAATGCCGGCGCCGGCGAAGGTGAAAGAGGAAGAGATAGGGAAATGTGGGAGCAGGATAATGGTGTTTGTGAGAGTTAGACCGATGAATAAGAAGGAGAAGGAATTGAATTCACGGTGTTGTGTGAGAATTGTGAATCAACGTGATGTTTATTTAACGGAGTTTGCGAATGAAAATGATTATCTTAGACTCAATAGAGTTAAGGGAAGACATTTTACTTTTGATGCTTCTTTTACTGATTCAGCTTCTCAGCTACAAGTTTATGCTACTACAACCTCGGAGCTTGTGGAAGCGGTTTTGCAGGGGAGGAATGGGTCGGTTTTCTGTTATGGTGCAACGGGAGCTGGAAAAACCTATACAATGCTTGGTACTGTGGAGAATCCAGGGGTGATGGTTTTGGCTATTAAGGATCTTTTTGGTAAAATCAGGCAGAGAAGCTGTGATGGAAGCCATGTGGTTCATCTTTCATATCTTGAGGTTTACAATGAAACTGTCAGAGATTTGTTGTGCCCTGGAAGACCTTTAGTCCTTAGAGAAGATAAACAGGGGATTGTGGCGGCGGGTCTTACACAATATAGAGCTTCGTCTGCAGATGAGGTGATGACATTGCTTCAACAAGGAAATCGGAACCGAACCACAGAACCAACTCGTGTAAATGAAACATCTTCGCGTTCCCATGCAATCTTGCAGGTTGTGGTTGAATACCGAGTTAGAGATGCTACAACAATGAGCATTGTTAACCGAGTGGGCAAACTCTCATTAATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACTGATCAAAGAACACTTAGATCCCTTGAAGGTGCCAATATAAACCGGTCTCTTCTTGCACTCAGCAGCTGCATCAATGCTCTTGTAGAAGGCAAGAAACACATACCGTATCGAAATTCAAAACTCACTCAACTTCTAAAGGATTCACTTGGAGGAATTTGTAATACTGTCATGATTGCAAACATAAGCCCAAGTAGCCTCTCATTTGGTGAAACCCAGAACACCGTTCACTGGGCTGATAGAGCCAAAGAGATTCGGCTGAAGGTAAGCGACACCAATGAGGATCAATTGCCGATGCCCGAGACAGAAACTGACCAGACCAAGCTGGTACTTGAGCTGCAAAAGGAGAACCGTGAATTAAGAACGCAACTAGCACGACAACAACAAAAGCTCTTGACTCTAGAAGCACAGTCCTTAGCTTCACAATCCTCTTCAACTCCGCAACCTTCTGCTGCAACTCTTTCCACTCCAACTTCTTCCCAACCTAGTGAAAAACGAAGGACTAGACCCTCTTTCTTGGCTGGAACTTGTTTCACTCCAGAAATCAAGAAGAAAGGAGCTGAGGTAACTGTGAGGACACTACAACAGACGGTGAAAGCACTGGAGGCTGAGATAGAGAGAATGAAGAAAGATCATAGCTTACAACTAAAGCAGAAAGATGATCTCATTCGCGAGGTTTCTCAAAAGTGTGGAAAACAGGCATTAACAAACGGTGAAGTTGGAAAGAAAATGGCAACTAGGGCTGCTAGCGTACAGGAAAAGGAGCCAAACAATGGTGAATTGAAGAGCCACCGGCTTCGATCACCAGCTCCAACTGCAAAGAAACGAAGCTTTTGGGACATAACCACCAATCATAGTCCATCAGTTACTACATTAAATGGGAGAAAAACCAGAAGTCATGTACTTTCAGAACCTACAGCTACAGCACCTCCTCCATCCATGCTTCTTCAGCCTGGTTTTGCTCGGCAACAAGCCAATAGTTAG

Protein sequence

>Msa1359980

MPVSTRSKITSENDLNPHHGLKEKLKTLTLLYEQQKQQSSKSLTAMRDRNSSIPTTTTVTKTFVLPQPPNQDSKENHNNLTVGSDRIVAFSYPKKITSTKNAIPVVARRLSMPAPAKVKEEEIGKCGSRIMVFVRVRPMNKKEKELNSRCCVRIVNQRDVYLTEFANENDYLRLNRVKGRHFTFDASFTDSASQLQVYATTTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDLFGKIRQRSCDGSHVVHLSYLEVYNETVRDLLCPGRPLVLREDKQGIVAAGLTQYRASSADEVMTLLQQGNRNRTTEPTRVNETSSRSHAILQVVVEYRVRDATTMSIVNRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGICNTVMIANISPSSLSFGETQNTVHWADRAKEIRLKVSDTNEDQLPMPETETDQTKLVLELQKENRELRTQLARQQQKLLTLEAQSLASQSSSTPQPSAATLSTPTSSQPSEKRRTRPSFLAGTCFTPEIKKKGAEVTVRTLQQTVKALEAEIERMKKDHSLQLKQKDDLIREVSQKCGKQALTNGEVGKKMATRAASVQEKEPNNGELKSHRLRSPAPTAKKRSFWDITTNHSPSVTTLNGRKTRSHVLSEPTATAPPPSMLLQPGFARQQANS*