AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0375030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0375030 MtrunA17_Chr3g0124991 97.368 532 10 2 1 529 1 531 0.0 1048
Msa0375030 MtrunA17_Chr3g0124971 82.490 514 85 2 20 529 26 538 0.0 827
Msa0375030 MtrunA17_Chr2g0333811 58.869 513 202 4 20 529 31 537 0.0 618
Msa0375030 MtrunA17_Chr3g0134491 42.325 456 238 9 31 478 66 504 1.02e-105 326
Msa0375030 MtrunA17_Chr5g0401611 42.198 455 240 9 31 478 52 490 1.82e-105 325
Msa0375030 MtrunA17_Chr4g0053701 42.017 476 244 10 24 484 39 497 4.26e-104 322
Msa0375030 MtrunA17_Chr8g0347551 38.046 481 268 9 11 478 58 521 1.17e-94 298
Msa0375030 MtrunA17_Chr7g0264231 26.540 422 261 12 33 439 31 418 5.05e-32 131
Msa0375030 MtrunA17_Chr2g0309271 27.100 369 242 11 79 439 6 355 1.39e-28 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0375030 AT1G15960.1 59.649 513 187 6 22 529 21 518 0.0 615
Msa0375030 AT1G80830.1 59.600 500 196 2 26 525 38 531 0.0 608
Msa0375030 AT1G80830.2 59.600 500 196 2 26 525 38 531 0.0 608
Msa0375030 AT1G47240.1 40.725 469 253 9 18 478 52 503 2.26e-105 326
Msa0375030 AT5G67330.1 41.845 466 248 10 26 484 44 493 8.50e-105 324
Msa0375030 AT2G23150.1 43.230 421 222 7 31 443 53 464 8.26e-102 316
Msa0375030 AT4G18790.1 39.130 483 265 10 8 478 40 505 3.05e-99 310
Msa0375030 AT5G03280.1 27.273 418 274 9 32 439 16 413 3.83e-34 138

Find 124 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATCATTGGTGGTTCTTC+TGG 0.206134 3_1:+74616502 Msa0375030:CDS
AGCCGATGCTATTGCCCTTT+TGG 0.215573 3_1:+74615479 Msa0375030:CDS
TTGCTGTGGTTGGTACTTAT+TGG 0.217432 3_1:+74613674 Msa0375030:CDS
TACTATTCAACATCCCATTA+TGG 0.239108 3_1:+74614320 Msa0375030:CDS
AAGCAATACTTCACAAATAA+TGG 0.285217 3_1:-74614087 None:intergenic
TAGCAGCAGCACAACCAAAA+TGG 0.288834 3_1:+74616699 Msa0375030:CDS
AAGGAAAGAAGCGGAGTTAA+GGG 0.309653 3_1:-74616065 None:intergenic
CGCGCTTATAATTCAGTCAT+TGG 0.312613 3_1:+74613706 Msa0375030:CDS
AAGCAGTGCTATGGCATAAA+TGG 0.318535 3_1:-74616260 None:intergenic
ATTCTTGTGAGGTCCCATTT+TGG 0.321502 3_1:-74616713 None:intergenic
TATTTGTGAAGTATTGCTTA+TGG 0.321986 3_1:+74614091 Msa0375030:CDS
TTGATGCCTCTCACAGAATT+AGG 0.325074 3_1:-74615721 None:intergenic
CCCAGCTTCTGGTGTACTTA+AGG 0.325720 3_1:+74615419 Msa0375030:CDS
GGCTCCTTCACCAGCCAGTT+TGG 0.327974 3_1:-74615454 None:intergenic
AAACTTAAGGAGTGGAATTA+AGG 0.328480 3_1:-74616677 None:intergenic
GAGAGTTACTTACTGTTTCC+AGG 0.331655 3_1:-74613165 None:intergenic
CAGTCATTGGCTGCAAATCT+TGG 0.336265 3_1:+74613719 Msa0375030:CDS
ATGCAAAACCAAGTGGAAAA+AGG 0.336749 3_1:+74617073 Msa0375030:CDS
TCAGCTAAATCTTCTCTATA+AGG 0.339264 3_1:-74617133 None:intergenic
AGTCTTGCTGTTGCCATCAT+TGG 0.340050 3_1:+74616490 Msa0375030:CDS
TAGCCTTGGATCCTTTATTC+TGG 0.340489 3_1:-74617166 None:intergenic
GAAGGAAAGAAGCGGAGTTA+AGG 0.344893 3_1:-74616066 None:intergenic
AACAGAACTCCTGCCCATAA+TGG 0.347335 3_1:-74614334 None:intergenic
TGCTCTGCCAATGACCTATC+TGG 0.350602 3_1:+74616013 Msa0375030:CDS
AGAAAACCAGGGCCTATATA+TGG 0.355996 3_1:-74613120 None:intergenic
ATCTCATGGATACTAGGTTT+TGG 0.367043 3_1:+74616851 Msa0375030:CDS
CCAGCTTCTGGTGTACTTAA+GGG 0.377926 3_1:+74615420 Msa0375030:CDS
GCAATATAAACTGCCATTAG+AGG 0.379665 3_1:-74616980 None:intergenic
GCTCCTTCACCAGCCAGTTT+GGG 0.383361 3_1:-74615453 None:intergenic
AAATATAAGTCACCACCTTC+AGG 0.385701 3_1:-74614150 None:intergenic
ATGAACACATTTGCCACCTT+TGG 0.395316 3_1:-74616941 None:intergenic
ACAGAACTCCTGCCCATAAT+GGG 0.402615 3_1:-74614333 None:intergenic
GATTATAGTGTTTCCTCTAA+TGG 0.404806 3_1:+74616967 Msa0375030:CDS
TCCTTGGCTTACCTTGATCC+TGG 0.418033 3_1:+74613147 Msa0375030:CDS
ATATCCCGCTACCAGAATAA+AGG 0.421458 3_1:+74617155 Msa0375030:CDS
AAGGTGGCAAATGTGTTCAT+TGG 0.426629 3_1:+74616944 Msa0375030:CDS
AGAAAGTATACGGCATGATA+AGG 0.426875 3_1:-74615506 None:intergenic
ATTACAATCTCATGGATACT+AGG 0.429574 3_1:+74616845 Msa0375030:CDS
ACTATTCAACATCCCATTAT+GGG 0.435828 3_1:+74614321 Msa0375030:CDS
AAACCGATGCGATGATGATA+AGG 0.436840 3_1:-74616534 None:intergenic
ACTTACTGTTTCCAGGATCA+AGG 0.437998 3_1:-74613158 None:intergenic
TTGTGCTGCTGCTAAACTTA+AGG 0.438674 3_1:-74616690 None:intergenic
AGGTGGCAAATGTGTTCATT+GGG 0.438921 3_1:+74616945 Msa0375030:CDS
TATAGGGTTTCTTAGACATA+AGG 0.440552 3_1:+74616416 Msa0375030:intron
CTCCGCTTCTTTCCTTCTCA+AGG 0.452971 3_1:+74616072 Msa0375030:CDS
ATGCGTTTGATTCATAGCCT+TGG 0.453713 3_1:-74617180 None:intergenic
AGCAGCAGCACAACCAAAAT+GGG 0.460120 3_1:+74616700 Msa0375030:CDS
TGGGCAGGAGTTCTGTTGAC+TGG 0.463210 3_1:+74614340 Msa0375030:CDS
CCCTTAAGTACACCAGAAGC+TGG 0.474697 3_1:-74615420 None:intergenic
GAAAGTATACGGCATGATAA+GGG 0.476396 3_1:-74615505 None:intergenic
GCCATAGCACTGCTTGCCTC+AGG 0.483626 3_1:+74616268 Msa0375030:CDS
CTTGCTGTTGCCATCATTGG+TGG 0.486524 3_1:+74616493 Msa0375030:CDS
GCCAGAAGAACCACCAATGA+TGG 0.490481 3_1:-74616503 None:intergenic
AAGTACCTCATCATGATTTG+AGG 0.494315 3_1:-74612914 None:intergenic
TAGACATAAGGATGAAAAGA+TGG 0.495109 3_1:+74616428 Msa0375030:CDS
GAGTGGATTCGCTTTGTTTG+TGG 0.496012 3_1:+74615946 Msa0375030:CDS
GGGAATGTTTGTGCCCAAAC+TGG 0.496192 3_1:+74615440 Msa0375030:CDS
TAAGGATGAAAAGATGGAAA+AGG 0.497031 3_1:+74616434 Msa0375030:CDS
CCCCAAAAGGGCAATAGCAT+CGG 0.499242 3_1:-74615481 None:intergenic
TTGTATTCAGTTGCTGTGGT+TGG 0.501745 3_1:+74613664 Msa0375030:intron
TGGATCCTTTATTCTGGTAG+CGG 0.502929 3_1:-74617160 None:intergenic
ACAACAACAACATCAAGTTA+TGG 0.503391 3_1:+74612885 Msa0375030:CDS
AACAATCCTAGTATTTGTAA+TGG 0.508316 3_1:+74615359 Msa0375030:CDS
GTGGAAACTGATTTGCAAGC+TGG 0.509805 3_1:+74613478 Msa0375030:intron
GGATCCTTTATTCTGGTAGC+GGG 0.510528 3_1:-74617159 None:intergenic
TGCAGATCATTACAATCTCA+TGG 0.512529 3_1:+74616837 Msa0375030:intron
GCAAATCTTGGCGTAACCAC+TGG 0.523154 3_1:+74613731 Msa0375030:CDS
TCCTGAGGCAAGCAGTGCTA+TGG 0.526104 3_1:-74616269 None:intergenic
CCTTAAGTACACCAGAAGCT+GGG 0.527484 3_1:-74615419 None:intergenic
TGTTGCAATGATTTCTGTGT+CGG 0.531965 3_1:+74615982 Msa0375030:CDS
ACTTGATTGTGACAGTGATT+GGG 0.532187 3_1:+74614278 Msa0375030:intron
GTTGCAATGATTTCTGTGTC+GGG 0.533159 3_1:+74615983 Msa0375030:CDS
GCCAAGGAAACAAGAAAACC+AGG 0.535144 3_1:-74613132 None:intergenic
ATTGTCTCCAGATAGGTCAT+TGG 0.535156 3_1:-74616020 None:intergenic
TCAGTACTGCCTTTGTGAAG+TGG 0.535986 3_1:+74616900 Msa0375030:CDS
ACTTGTATGTAGAATGTGTT+GGG 0.538453 3_1:+74616223 Msa0375030:intron
CAACTTTACATACTTCTGAA+AGG 0.539753 3_1:-74614059 None:intergenic
TTCAACATCCCATTATGGGC+AGG 0.543459 3_1:+74614325 Msa0375030:CDS
ACCATCACAGGAACTTATGC+AGG 0.551377 3_1:+74616301 Msa0375030:CDS
GTTCAACATTGTCTCCAGAT+AGG 0.551581 3_1:-74616027 None:intergenic
TTAAATTAGGAACCTTGAGA+AGG 0.552918 3_1:-74616084 None:intergenic
ATGTTTGTGCCCAAACTGGC+TGG 0.553195 3_1:+74615444 Msa0375030:CDS
TTGCTTATGGTTATTAGCAG+AGG 0.558459 3_1:+74614104 Msa0375030:CDS
AACAGCAAGACTAGGTGCTA+TGG 0.561217 3_1:-74616479 None:intergenic
AAGCGAATCCACTCTCATAG+AGG 0.564674 3_1:-74615937 None:intergenic
ATGCAGCCATTACAAATACT+AGG 0.564740 3_1:-74615365 None:intergenic
TTTGAGTCTGCAGAGGTTTG+GGG 0.565267 3_1:+74614381 Msa0375030:CDS
AAGGGCAATAGCATCGGCTA+CGG 0.568499 3_1:-74615475 None:intergenic
AGGAGTGGAATTAAGGCGAA+TGG 0.571377 3_1:-74616670 None:intergenic
GGACAAAGTTCTACCATCAC+AGG 0.573167 3_1:+74616289 Msa0375030:CDS
CTTAAGTACACCAGAAGCTG+GGG 0.583089 3_1:-74615418 None:intergenic
TGCAGGACAGTACATCATGC+AGG 0.588205 3_1:+74616318 Msa0375030:CDS
GTGCCCAAACTGGCTGGTGA+AGG 0.595265 3_1:+74615450 Msa0375030:CDS
AACTTGTATGTAGAATGTGT+TGG 0.595481 3_1:+74616222 Msa0375030:intron
GTAGATCACAGAAAGAGTAA+TGG 0.598363 3_1:+74612837 Msa0375030:exon
AGATATTTCCTCTATGAGAG+TGG 0.600417 3_1:+74615929 Msa0375030:CDS
AAAGTACCTAATTCTGTGAG+AGG 0.602100 3_1:+74615715 Msa0375030:CDS
TCCAGGATCAAGGTAAGCCA+AGG 0.603314 3_1:-74613148 None:intergenic
CTACCAGAATAAAGGATCCA+AGG 0.603554 3_1:+74617163 Msa0375030:exon
TCGCCTTATCATCATCGCAT+CGG 0.604941 3_1:+74616531 Msa0375030:CDS
ATGATGGCAACAGCAAGACT+AGG 0.605747 3_1:-74616487 None:intergenic
GTTGTTGTATTCAGTTGCTG+TGG 0.606399 3_1:+74613660 Msa0375030:intron
ACATAGTAGTCTACCAAAGG+TGG 0.621719 3_1:+74616928 Msa0375030:CDS
TCCTGCATAAGTTCCTGTGA+TGG 0.622524 3_1:-74616302 None:intergenic
TACAGTAATGCAAAACCAAG+TGG 0.623131 3_1:+74617066 Msa0375030:CDS
AATCTTCTCTATAAGGAACA+TGG 0.634971 3_1:-74617126 None:intergenic
AACATCCTCAAATCATGATG+AGG 0.639290 3_1:+74612909 Msa0375030:CDS
AATACATAGTAGTCTACCAA+AGG 0.639513 3_1:+74616925 Msa0375030:CDS
AACCTTGAGAAGGAAAGAAG+CGG 0.643227 3_1:-74616074 None:intergenic
ATAGCACAAGAGCAGAGTGG+AGG 0.661177 3_1:-74615687 None:intergenic
ATAGCAGCTGACATACCTGA+AGG 0.665156 3_1:+74614135 Msa0375030:CDS
TGGAGCTAACCACGGATACG+AGG 0.667237 3_1:+74613498 Msa0375030:CDS
CCAAGGAAACAAGAAAACCA+GGG 0.671441 3_1:-74613131 None:intergenic
CTGCTGCTAAACTTAAGGAG+TGG 0.674326 3_1:-74616685 None:intergenic
TAGATAGCACAAGAGCAGAG+TGG 0.681480 3_1:-74615690 None:intergenic
GAATAGTATGTTGAGAGCAA+AGG 0.682866 3_1:-74614305 None:intergenic
TTGCAAGCTGGAGCTAACCA+CGG 0.687380 3_1:+74613490 Msa0375030:CDS
GCAGCTGACATACCTGAAGG+TGG 0.689194 3_1:+74614138 Msa0375030:CDS
ACAATAATAGAATTCTTGTG+AGG 0.689916 3_1:-74616724 None:intergenic
TTAAGTACACCAGAAGCTGG+GGG 0.708850 3_1:-74615417 None:intergenic
GAAGGTTAGGTAGATAACTG+AGG 0.709296 3_1:-74617002 None:intergenic
ATGTATTATCCACTTCACAA+AGG 0.714900 3_1:-74616909 None:intergenic
GATGGTAGAACTTTGTCCTG+AGG 0.715483 3_1:-74616284 None:intergenic
ACTTCACAAAGGCAGTACTG+AGG 0.732634 3_1:-74616898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATTTATATAGTTTAG+GGG - chr3_1:74613266-74613285 None:intergenic 10.0%
!! CATTATATTTATATAGTTTA+GGG - chr3_1:74613267-74613286 None:intergenic 10.0%
!! TCATTATATTTATATAGTTT+AGG - chr3_1:74613268-74613287 None:intergenic 10.0%
!! TATTATATTTACATAGTTTA+TGG + chr3_1:74613363-74613382 Msa0375030:intron 10.0%
!! AACTTAAATTTCTTATTATA+AGG - chr3_1:74613954-74613973 None:intergenic 10.0%
!!! AAATTTAAGTTATAAATGAA+AGG + chr3_1:74613963-74613982 Msa0375030:intron 10.0%
!! TTGAAATTCAAAATATAATT+TGG - chr3_1:74615049-74615068 None:intergenic 10.0%
!!! CATTTTTATAACAAAATGTT+AGG - chr3_1:74613615-74613634 None:intergenic 15.0%
!!! TTTTATTATTTATATTTGGC+AGG + chr3_1:74614030-74614049 Msa0375030:intron 15.0%
!! AATTCAAAATATAATTTGGT+AGG - chr3_1:74615045-74615064 None:intergenic 15.0%
!! TCAAAATTACATAAATTGTA+GGG - chr3_1:74615139-74615158 None:intergenic 15.0%
!! TTCAAAATTACATAAATTGT+AGG - chr3_1:74615140-74615159 None:intergenic 15.0%
!! GAAATTAATAAATTTAGCTA+TGG + chr3_1:74615758-74615777 Msa0375030:intron 15.0%
!! GAAAACTTGAATAAATTAGA+AGG - chr3_1:74612960-74612979 None:intergenic 20.0%
!!! TCTTGTATATATACATGTTT+TGG + chr3_1:74612983-74613002 Msa0375030:intron 20.0%
!! TACTATTGTTAAAAGAAACT+AGG - chr3_1:74613028-74613047 None:intergenic 20.0%
!!! TTGAATTAGTTTGATTGAAA+AGG - chr3_1:74614204-74614223 None:intergenic 20.0%
!!! CTTTTAGATTTCATTTTTCA+TGG + chr3_1:74614509-74614528 Msa0375030:intron 20.0%
!! TACATAAAGATAGTAATAGT+GGG - chr3_1:74614715-74614734 None:intergenic 20.0%
!! TTACATAAAGATAGTAATAG+TGG - chr3_1:74614716-74614735 None:intergenic 20.0%
!!! ATCCTTGATTTTTATTTGAA+TGG + chr3_1:74614807-74614826 Msa0375030:intron 20.0%
!! CAAAATTACATAAATTGTAG+GGG - chr3_1:74615138-74615157 None:intergenic 20.0%
!! TGTAACATATGTAATCTTAA+GGG - chr3_1:74615298-74615317 None:intergenic 20.0%
!! ATGTAACATATGTAATCTTA+AGG - chr3_1:74615299-74615318 None:intergenic 20.0%
!!! ATATAGGAAAAGAAAGTATA+CGG - chr3_1:74615519-74615538 None:intergenic 20.0%
!!! TACTGTATGATATAAACTTT+TGG - chr3_1:74615606-74615625 None:intergenic 20.0%
!! AAATTTATTAATTTCCTGAG+TGG - chr3_1:74615753-74615772 None:intergenic 20.0%
!! TACTAGTAGTGAATTAAATT+AGG - chr3_1:74616100-74616119 None:intergenic 20.0%
!! TAGTATATAATAAGTTGCTA+TGG + chr3_1:74616115-74616134 Msa0375030:intron 20.0%
!! TTTACTGAATTTAGATTGTT+TGG + chr3_1:74616386-74616405 Msa0375030:intron 20.0%
!! AGAAAGTTTTTGCCATATAT+AGG + chr3_1:74613108-74613127 Msa0375030:CDS 25.0%
! TGATGAATGCTATATGATTT+AGG + chr3_1:74613333-74613352 Msa0375030:intron 25.0%
! GATGAATGCTATATGATTTA+GGG + chr3_1:74613334-74613353 Msa0375030:intron 25.0%
! TGATATTTCACAATTCATAG+TGG + chr3_1:74613459-74613478 Msa0375030:intron 25.0%
! TATAACAAAATGTTAGGAGA+AGG - chr3_1:74613609-74613628 None:intergenic 25.0%
! AAGCAATACTTCACAAATAA+TGG - chr3_1:74614090-74614109 None:intergenic 25.0%
!!! TATTTGTGAAGTATTGCTTA+TGG + chr3_1:74614091-74614110 Msa0375030:CDS 25.0%
! AAAAGGACAAAAATACAAGA+CGG - chr3_1:74614187-74614206 None:intergenic 25.0%
!!! TTTTTTTAATCTTAACCCTC+CGG - chr3_1:74614660-74614679 None:intergenic 25.0%
! TGCCATTCAAATAAAAATCA+AGG - chr3_1:74614812-74614831 None:intergenic 25.0%
! TTAAAGTAGTAAAAAGTCCA+GGG - chr3_1:74614869-74614888 None:intergenic 25.0%
! ATTAAAGTAGTAAAAAGTCC+AGG - chr3_1:74614870-74614889 None:intergenic 25.0%
! TCAAAATATAATTTGGTAGG+AGG - chr3_1:74615042-74615061 None:intergenic 25.0%
!!! TACATGTACTTTTTTTGTAC+AGG + chr3_1:74615314-74615333 Msa0375030:intron 25.0%
! AACAATCCTAGTATTTGTAA+TGG + chr3_1:74615359-74615378 Msa0375030:CDS 25.0%
!!! TAATGATGGACAAGTTATAT+AGG - chr3_1:74615535-74615554 None:intergenic 25.0%
! TAGAAGTTAAATGTGCAATT+AGG - chr3_1:74615823-74615842 None:intergenic 25.0%
!! TTTAACTTCTATGTAGACAT+TGG + chr3_1:74615832-74615851 Msa0375030:intron 25.0%
!! CTATTTAACGATTTTGTTGA+AGG + chr3_1:74616362-74616381 Msa0375030:intron 25.0%
! ACAATAATAGAATTCTTGTG+AGG - chr3_1:74616727-74616746 None:intergenic 25.0%
ACAACAACAACATCAAGTTA+TGG + chr3_1:74612885-74612904 Msa0375030:CDS 30.0%
CATTGATAGACACAAAAATC+TGG + chr3_1:74613081-74613100 Msa0375030:intron 30.0%
AGAAAAACGTGAAACCAAAA+GGG - chr3_1:74613190-74613209 None:intergenic 30.0%
TATAGTTTAGGGGTTACATT+GGG - chr3_1:74613256-74613275 None:intergenic 30.0%
ATATAGTTTAGGGGTTACAT+TGG - chr3_1:74613257-74613276 None:intergenic 30.0%
AATATTGGGGACAAAATTGA+CGG - chr3_1:74613294-74613313 None:intergenic 30.0%
!!! TCCCCAATATTTTAATAGCA+GGG + chr3_1:74613303-74613322 Msa0375030:intron 30.0%
TCCCTGCTATTAAAATATTG+GGG - chr3_1:74613307-74613326 None:intergenic 30.0%
GTCCCTGCTATTAAAATATT+GGG - chr3_1:74613308-74613327 None:intergenic 30.0%
AGTCCCTGCTATTAAAATAT+TGG - chr3_1:74613309-74613328 None:intergenic 30.0%
! TTTTTCTAAATACTCACCAG+TGG - chr3_1:74613750-74613769 None:intergenic 30.0%
!! AGTAAGTTGATGATTGACTT+GGG - chr3_1:74613822-74613841 None:intergenic 30.0%
!! TAGTAAGTTGATGATTGACT+TGG - chr3_1:74613823-74613842 None:intergenic 30.0%
TTAGATCAAACTGATTACAC+AGG - chr3_1:74613861-74613880 None:intergenic 30.0%
GTTTGATCTAATAGTTGCTA+TGG + chr3_1:74613870-74613889 Msa0375030:intron 30.0%
CAACTTTACATACTTCTGAA+AGG - chr3_1:74614062-74614081 None:intergenic 30.0%
TACTATTCAACATCCCATTA+TGG + chr3_1:74614320-74614339 Msa0375030:CDS 30.0%
ACTATTCAACATCCCATTAT+GGG + chr3_1:74614321-74614340 Msa0375030:CDS 30.0%
AGAAGAAAATGTGGATTTCA+TGG + chr3_1:74615165-74615184 Msa0375030:intron 30.0%
CATATGTAATCTTAAGGGTA+AGG - chr3_1:74615293-74615312 None:intergenic 30.0%
TTAAATTAGGAACCTTGAGA+AGG - chr3_1:74616087-74616106 None:intergenic 30.0%
AGTGCATGTGAGATATAATT+TGG - chr3_1:74616185-74616204 None:intergenic 30.0%
AACTTGTATGTAGAATGTGT+TGG + chr3_1:74616222-74616241 Msa0375030:intron 30.0%
ACTTGTATGTAGAATGTGTT+GGG + chr3_1:74616223-74616242 Msa0375030:intron 30.0%
CTGAATTTAGATTGTTTGGT+TGG + chr3_1:74616390-74616409 Msa0375030:intron 30.0%
!! ATTGTTTGGTTGGTGATATA+GGG + chr3_1:74616400-74616419 Msa0375030:intron 30.0%
TATAGGGTTTCTTAGACATA+AGG + chr3_1:74616416-74616435 Msa0375030:intron 30.0%
TAGACATAAGGATGAAAAGA+TGG + chr3_1:74616428-74616447 Msa0375030:CDS 30.0%
TAAGGATGAAAAGATGGAAA+AGG + chr3_1:74616434-74616453 Msa0375030:CDS 30.0%
AAACTTAAGGAGTGGAATTA+AGG - chr3_1:74616680-74616699 None:intergenic 30.0%
ATTACAATCTCATGGATACT+AGG + chr3_1:74616845-74616864 Msa0375030:CDS 30.0%
ATGTATTATCCACTTCACAA+AGG - chr3_1:74616912-74616931 None:intergenic 30.0%
AATACATAGTAGTCTACCAA+AGG + chr3_1:74616925-74616944 Msa0375030:CDS 30.0%
GATTATAGTGTTTCCTCTAA+TGG + chr3_1:74616967-74616986 Msa0375030:CDS 30.0%
GAAAAAGGAATTGTGGATAA+TGG + chr3_1:74617088-74617107 Msa0375030:CDS 30.0%
AATCTTCTCTATAAGGAACA+TGG - chr3_1:74617129-74617148 None:intergenic 30.0%
TCAGCTAAATCTTCTCTATA+AGG - chr3_1:74617136-74617155 None:intergenic 30.0%
GTAGATCACAGAAAGAGTAA+TGG + chr3_1:74612837-74612856 Msa0375030:exon 35.0%
AACATCCTCAAATCATGATG+AGG + chr3_1:74612909-74612928 Msa0375030:CDS 35.0%
AAGTACCTCATCATGATTTG+AGG - chr3_1:74612917-74612936 None:intergenic 35.0%
GATAGACACAAAAATCTGGA+TGG + chr3_1:74613085-74613104 Msa0375030:intron 35.0%
GAGAAAAACGTGAAACCAAA+AGG - chr3_1:74613191-74613210 None:intergenic 35.0%
ATAGTTTAGGGGTTACATTG+GGG - chr3_1:74613255-74613274 None:intergenic 35.0%
!!! GTCCCCAATATTTTAATAGC+AGG + chr3_1:74613302-74613321 Msa0375030:intron 35.0%
!! TTACTCCTTCAGACTTGTTA+AGG - chr3_1:74613541-74613560 None:intergenic 35.0%
AGTCTGAAGGAGTAATAAGA+AGG + chr3_1:74613546-74613565 Msa0375030:intron 35.0%
AGTAATAAGAAGGAAGTCCA+GGG + chr3_1:74613556-74613575 Msa0375030:intron 35.0%
!!! GGAGGAATTTTTTAGAAGCA+GGG - chr3_1:74613588-74613607 None:intergenic 35.0%
!!! AGGAGGAATTTTTTAGAAGC+AGG - chr3_1:74613589-74613608 None:intergenic 35.0%
AACAAAATGTTAGGAGAAGG+AGG - chr3_1:74613606-74613625 None:intergenic 35.0%
TTAGAAAAATTCAAGCCTCG+TGG + chr3_1:74613761-74613780 Msa0375030:intron 35.0%
CGACCTAAGTAGAATTCATA+AGG + chr3_1:74613796-74613815 Msa0375030:intron 35.0%
TTACACAGGCATAATGCATA+GGG - chr3_1:74613847-74613866 None:intergenic 35.0%
ATTACACAGGCATAATGCAT+AGG - chr3_1:74613848-74613867 None:intergenic 35.0%
TTGCTTATGGTTATTAGCAG+AGG + chr3_1:74614104-74614123 Msa0375030:CDS 35.0%
AAATATAAGTCACCACCTTC+AGG - chr3_1:74614153-74614172 None:intergenic 35.0%
AACTTGATTGTGACAGTGAT+TGG + chr3_1:74614277-74614296 Msa0375030:intron 35.0%
ACTTGATTGTGACAGTGATT+GGG + chr3_1:74614278-74614297 Msa0375030:intron 35.0%
GAATAGTATGTTGAGAGCAA+AGG - chr3_1:74614308-74614327 None:intergenic 35.0%
CGAGAGTCAAATCTAATTTG+AGG - chr3_1:74614569-74614588 None:intergenic 35.0%
ACCAGACTTTACTTACCTAT+CGG + chr3_1:74614589-74614608 Msa0375030:intron 35.0%
! AAAGATAGTAATAGTGGGAG+TGG - chr3_1:74614710-74614729 None:intergenic 35.0%
CTTGATATTGAGGTCAAATG+CGG + chr3_1:74614933-74614952 Msa0375030:intron 35.0%
TTGATATTGAGGTCAAATGC+GGG + chr3_1:74614934-74614953 Msa0375030:intron 35.0%
AGTCCATGATCTACTGAAAA+TGG + chr3_1:74615094-74615113 Msa0375030:intron 35.0%
TGAACGATGAGAAGAAAATG+TGG + chr3_1:74615156-74615175 Msa0375030:intron 35.0%
!!! GTACTTTTTTTGTACAGGTG+AGG + chr3_1:74615319-74615338 Msa0375030:intron 35.0%
ATGCAGCCATTACAAATACT+AGG - chr3_1:74615368-74615387 None:intergenic 35.0%
! GAAAGTATACGGCATGATAA+GGG - chr3_1:74615508-74615527 None:intergenic 35.0%
! AGAAAGTATACGGCATGATA+AGG - chr3_1:74615509-74615528 None:intergenic 35.0%
! ATGCGTCTAAGATTCTTCTT+TGG + chr3_1:74615641-74615660 Msa0375030:intron 35.0%
TTCTTCTTTGGACAAAATGC+AGG + chr3_1:74615653-74615672 Msa0375030:intron 35.0%
! AAAGTACCTAATTCTGTGAG+AGG + chr3_1:74615715-74615734 Msa0375030:CDS 35.0%
AGATATTTCCTCTATGAGAG+TGG + chr3_1:74615929-74615948 Msa0375030:CDS 35.0%
TGTTGCAATGATTTCTGTGT+CGG + chr3_1:74615982-74616001 Msa0375030:CDS 35.0%
GCATGTGAGATATAATTTGG+TGG - chr3_1:74616182-74616201 None:intergenic 35.0%
!! GATTGTTTGGTTGGTGATAT+AGG + chr3_1:74616399-74616418 Msa0375030:intron 35.0%
ATACATATCGAGGAGAGAAA+AGG - chr3_1:74616757-74616776 None:intergenic 35.0%
CTATCTTAGCATACATATCG+AGG - chr3_1:74616767-74616786 None:intergenic 35.0%
CTCGATATGTATGCTAAGAT+AGG + chr3_1:74616765-74616784 Msa0375030:intron 35.0%
TGCAGATCATTACAATCTCA+TGG + chr3_1:74616837-74616856 Msa0375030:intron 35.0%
! ATCTCATGGATACTAGGTTT+TGG + chr3_1:74616851-74616870 Msa0375030:CDS 35.0%
GCAATATAAACTGCCATTAG+AGG - chr3_1:74616983-74617002 None:intergenic 35.0%
TACAGTAATGCAAAACCAAG+TGG + chr3_1:74617066-74617085 Msa0375030:CDS 35.0%
ATGCAAAACCAAGTGGAAAA+AGG + chr3_1:74617073-74617092 Msa0375030:CDS 35.0%
! TTTTTGCCATATATAGGCCC+TGG + chr3_1:74613114-74613133 Msa0375030:CDS 40.0%
AGAAAACCAGGGCCTATATA+TGG - chr3_1:74613123-74613142 None:intergenic 40.0%
CCAAGGAAACAAGAAAACCA+GGG - chr3_1:74613134-74613153 None:intergenic 40.0%
ACTTACTGTTTCCAGGATCA+AGG - chr3_1:74613161-74613180 None:intergenic 40.0%
GAGAGTTACTTACTGTTTCC+AGG - chr3_1:74613168-74613187 None:intergenic 40.0%
! CAGTAAGTAACTCTCCCTTT+TGG + chr3_1:74613173-74613192 Msa0375030:intron 40.0%
!! ATTGTTTTACCTCGTATCCG+TGG - chr3_1:74613510-74613529 None:intergenic 40.0%
AACCACCTTAACAAGTCTGA+AGG + chr3_1:74613533-74613552 Msa0375030:intron 40.0%
GAGTAATAAGAAGGAAGTCC+AGG + chr3_1:74613555-74613574 Msa0375030:intron 40.0%
GTTGTTGTATTCAGTTGCTG+TGG + chr3_1:74613660-74613679 Msa0375030:intron 40.0%
TTGTATTCAGTTGCTGTGGT+TGG + chr3_1:74613664-74613683 Msa0375030:intron 40.0%
! TTGCTGTGGTTGGTACTTAT+TGG + chr3_1:74613674-74613693 Msa0375030:CDS 40.0%
CGCGCTTATAATTCAGTCAT+TGG + chr3_1:74613706-74613725 Msa0375030:CDS 40.0%
! GGGCCTTATGAATTCTACTT+AGG - chr3_1:74613802-74613821 None:intergenic 40.0%
!! TTTTGAGTCTGCAGAGGTTT+GGG + chr3_1:74614380-74614399 Msa0375030:CDS 40.0%
ACCGATAGGTAAGTAAAGTC+TGG - chr3_1:74614593-74614612 None:intergenic 40.0%
AGACTTTACTTACCTATCGG+TGG + chr3_1:74614592-74614611 Msa0375030:intron 40.0%
! AAATCGACTCCTCTAGTTCA+CGG + chr3_1:74614681-74614700 Msa0375030:intron 40.0%
TCCTGACAAGGGAGAAAATA+CGG - chr3_1:74614840-74614859 None:intergenic 40.0%
ACCTCAATATCAAGGATCGT+GGG - chr3_1:74614927-74614946 None:intergenic 40.0%
CGCATTTGACCTCAATATCA+AGG - chr3_1:74614935-74614954 None:intergenic 40.0%
TGTGACCTAAAACGTAGTCA+CGG + chr3_1:74614960-74614979 Msa0375030:intron 40.0%
AGGCCATGATATCTCATTGA+GGG - chr3_1:74615022-74615041 None:intergenic 40.0%
! CGTCCATTTTCAGTAGATCA+TGG - chr3_1:74615100-74615119 None:intergenic 40.0%
! TTTTGTACAGGTGAGGAAGT+TGG + chr3_1:74615326-74615345 Msa0375030:intron 40.0%
TTGATGCCTCTCACAGAATT+AGG - chr3_1:74615724-74615743 None:intergenic 40.0%
ATGTAGACATTGGTAGATCG+TGG + chr3_1:74615842-74615861 Msa0375030:intron 40.0%
TGTAGACATTGGTAGATCGT+GGG + chr3_1:74615843-74615862 Msa0375030:intron 40.0%
ACCTATCTGCTATATTGTGC+AGG + chr3_1:74615898-74615917 Msa0375030:intron 40.0%
TCCTGCACAATATAGCAGAT+AGG - chr3_1:74615902-74615921 None:intergenic 40.0%
GTTGCAATGATTTCTGTGTC+GGG + chr3_1:74615983-74616002 Msa0375030:CDS 40.0%
ATTGTCTCCAGATAGGTCAT+TGG - chr3_1:74616023-74616042 None:intergenic 40.0%
GTTCAACATTGTCTCCAGAT+AGG - chr3_1:74616030-74616049 None:intergenic 40.0%
AAGGAAAGAAGCGGAGTTAA+GGG - chr3_1:74616068-74616087 None:intergenic 40.0%
AACCTTGAGAAGGAAAGAAG+CGG - chr3_1:74616077-74616096 None:intergenic 40.0%
! TTGGTGGTTACTGCTTAGTT+AGG - chr3_1:74616166-74616185 None:intergenic 40.0%
AAGCAGTGCTATGGCATAAA+TGG - chr3_1:74616263-74616282 None:intergenic 40.0%
AAACCGATGCGATGATGATA+AGG - chr3_1:74616537-74616556 None:intergenic 40.0%
! TTGTGCTGCTGCTAAACTTA+AGG - chr3_1:74616693-74616712 None:intergenic 40.0%
! ATTCTTGTGAGGTCCCATTT+TGG - chr3_1:74616716-74616735 None:intergenic 40.0%
ACATAGTAGTCTACCAAAGG+TGG + chr3_1:74616928-74616947 Msa0375030:CDS 40.0%
ATGAACACATTTGCCACCTT+TGG - chr3_1:74616944-74616963 None:intergenic 40.0%
AAGGTGGCAAATGTGTTCAT+TGG + chr3_1:74616944-74616963 Msa0375030:CDS 40.0%
AGGTGGCAAATGTGTTCATT+GGG + chr3_1:74616945-74616964 Msa0375030:CDS 40.0%
GAAGGTTAGGTAGATAACTG+AGG - chr3_1:74617005-74617024 None:intergenic 40.0%
!! CAGTGTCTTTTCTGAAGGTT+AGG - chr3_1:74617018-74617037 None:intergenic 40.0%
! CTCAACAGTGTCTTTTCTGA+AGG - chr3_1:74617023-74617042 None:intergenic 40.0%
! CCACAATTCCTTTTTCCACT+TGG - chr3_1:74617084-74617103 None:intergenic 40.0%
CCAAGTGGAAAAAGGAATTG+TGG + chr3_1:74617081-74617100 Msa0375030:CDS 40.0%
ATATCCCGCTACCAGAATAA+AGG + chr3_1:74617155-74617174 Msa0375030:CDS 40.0%
TGGATCCTTTATTCTGGTAG+CGG - chr3_1:74617163-74617182 None:intergenic 40.0%
CTACCAGAATAAAGGATCCA+AGG + chr3_1:74617163-74617182 Msa0375030:exon 40.0%
! TAGCCTTGGATCCTTTATTC+TGG - chr3_1:74617169-74617188 None:intergenic 40.0%
ATGCGTTTGATTCATAGCCT+TGG - chr3_1:74617183-74617202 None:intergenic 40.0%
!! CCCTGGTTTTCTTGTTTCCT+TGG + chr3_1:74613131-74613150 Msa0375030:CDS 45.0%
GCCAAGGAAACAAGAAAACC+AGG - chr3_1:74613135-74613154 None:intergenic 45.0%
!! GTGGAAACTGATTTGCAAGC+TGG + chr3_1:74613478-74613497 Msa0375030:intron 45.0%
!! CTCCTTCAGACTTGTTAAGG+TGG - chr3_1:74613538-74613557 None:intergenic 45.0%
! CAGTCATTGGCTGCAAATCT+TGG + chr3_1:74613719-74613738 Msa0375030:CDS 45.0%
ATAGCAGCTGACATACCTGA+AGG + chr3_1:74614135-74614154 Msa0375030:CDS 45.0%
TTCAACATCCCATTATGGGC+AGG + chr3_1:74614325-74614344 Msa0375030:CDS 45.0%
ACAGAACTCCTGCCCATAAT+GGG - chr3_1:74614336-74614355 None:intergenic 45.0%
AACAGAACTCCTGCCCATAA+TGG - chr3_1:74614337-74614356 None:intergenic 45.0%
!! TCTTGCTTTTGAGTCTGCAG+AGG + chr3_1:74614374-74614393 Msa0375030:CDS 45.0%
!! CTTTTGAGTCTGCAGAGGTT+TGG + chr3_1:74614379-74614398 Msa0375030:CDS 45.0%
TTTGAGTCTGCAGAGGTTTG+GGG + chr3_1:74614381-74614400 Msa0375030:CDS 45.0%
TCCTAGTAAGTTGTGATCCG+CGG - chr3_1:74614620-74614639 None:intergenic 45.0%
TCTTAACCCTCCGGTTCTTA+GGG - chr3_1:74614651-74614670 None:intergenic 45.0%
ATCTTAACCCTCCGGTTCTT+AGG - chr3_1:74614652-74614671 None:intergenic 45.0%
! TCCGTATTTTCTCCCTTGTC+AGG + chr3_1:74614836-74614855 Msa0375030:intron 45.0%
AGCTCACTTGGTTGAGCTAA+GGG - chr3_1:74614893-74614912 None:intergenic 45.0%
TAGCTCACTTGGTTGAGCTA+AGG - chr3_1:74614894-74614913 None:intergenic 45.0%
CTCAATATCAAGGATCGTGG+GGG - chr3_1:74614925-74614944 None:intergenic 45.0%
CCTCAATATCAAGGATCGTG+GGG - chr3_1:74614926-74614945 None:intergenic 45.0%
GACCTCAATATCAAGGATCG+TGG - chr3_1:74614928-74614947 None:intergenic 45.0%
GTGACCTAAAACGTAGTCAC+GGG + chr3_1:74614961-74614980 Msa0375030:intron 45.0%
TGCCCCTCAATGAGATATCA+TGG + chr3_1:74615016-74615035 Msa0375030:intron 45.0%
GGCCATGATATCTCATTGAG+GGG - chr3_1:74615021-74615040 None:intergenic 45.0%
GAGGCCATGATATCTCATTG+AGG - chr3_1:74615023-74615042 None:intergenic 45.0%
TATGTAAATCCCCCAGCTTC+TGG + chr3_1:74615408-74615427 Msa0375030:CDS 45.0%
TTAAGTACACCAGAAGCTGG+GGG - chr3_1:74615420-74615439 None:intergenic 45.0%
CTTAAGTACACCAGAAGCTG+GGG - chr3_1:74615421-74615440 None:intergenic 45.0%
CCTTAAGTACACCAGAAGCT+GGG - chr3_1:74615422-74615441 None:intergenic 45.0%
CCAGCTTCTGGTGTACTTAA+GGG + chr3_1:74615420-74615439 Msa0375030:CDS 45.0%
TAGATAGCACAAGAGCAGAG+TGG - chr3_1:74615693-74615712 None:intergenic 45.0%
GTAGACATTGGTAGATCGTG+GGG + chr3_1:74615844-74615863 Msa0375030:intron 45.0%
AAGCGAATCCACTCTCATAG+AGG - chr3_1:74615940-74615959 None:intergenic 45.0%
!! GAGTGGATTCGCTTTGTTTG+TGG + chr3_1:74615946-74615965 Msa0375030:CDS 45.0%
GAAGGAAAGAAGCGGAGTTA+AGG - chr3_1:74616069-74616088 None:intergenic 45.0%
GATGGTAGAACTTTGTCCTG+AGG - chr3_1:74616287-74616306 None:intergenic 45.0%
GGACAAAGTTCTACCATCAC+AGG + chr3_1:74616289-74616308 Msa0375030:CDS 45.0%
ACCATCACAGGAACTTATGC+AGG + chr3_1:74616301-74616320 Msa0375030:CDS 45.0%
TCCTGCATAAGTTCCTGTGA+TGG - chr3_1:74616305-74616324 None:intergenic 45.0%
AACAGCAAGACTAGGTGCTA+TGG - chr3_1:74616482-74616501 None:intergenic 45.0%
ATGATGGCAACAGCAAGACT+AGG - chr3_1:74616490-74616509 None:intergenic 45.0%
!! AGTCTTGCTGTTGCCATCAT+TGG + chr3_1:74616490-74616509 Msa0375030:CDS 45.0%
TCGCCTTATCATCATCGCAT+CGG + chr3_1:74616531-74616550 Msa0375030:CDS 45.0%
AGGAGTGGAATTAAGGCGAA+TGG - chr3_1:74616673-74616692 None:intergenic 45.0%
CTGCTGCTAAACTTAAGGAG+TGG - chr3_1:74616688-74616707 None:intergenic 45.0%
TAGCAGCAGCACAACCAAAA+TGG + chr3_1:74616699-74616718 Msa0375030:CDS 45.0%
AGCAGCAGCACAACCAAAAT+GGG + chr3_1:74616700-74616719 Msa0375030:CDS 45.0%
ACTTCACAAAGGCAGTACTG+AGG - chr3_1:74616901-74616920 None:intergenic 45.0%
TCAGTACTGCCTTTGTGAAG+TGG + chr3_1:74616900-74616919 Msa0375030:CDS 45.0%
GGATCCTTTATTCTGGTAGC+GGG - chr3_1:74617162-74617181 None:intergenic 45.0%
!!! TAACTTTTATTATTTATATT+TGG + chr3_1:74614026-74614045 Msa0375030:intron 5.0%
!!! TTTTATAAAAAAATTAATGA+TGG - chr3_1:74615549-74615568 None:intergenic 5.0%
TCCTTGGCTTACCTTGATCC+TGG + chr3_1:74613147-74613166 Msa0375030:CDS 50.0%
TCCAGGATCAAGGTAAGCCA+AGG - chr3_1:74613151-74613170 None:intergenic 50.0%
GGGGAGAGAGTGATACTCTA+TGG - chr3_1:74613236-74613255 None:intergenic 50.0%
TTGCAAGCTGGAGCTAACCA+CGG + chr3_1:74613490-74613509 Msa0375030:CDS 50.0%
GCAAATCTTGGCGTAACCAC+TGG + chr3_1:74613731-74613750 Msa0375030:CDS 50.0%
TCGTATCTCGTACAACCACG+AGG - chr3_1:74613779-74613798 None:intergenic 50.0%
ACCGCGGATCACAACTTACT+AGG + chr3_1:74614616-74614635 Msa0375030:intron 50.0%
! GACCCTTTTCCCCTAAGAAC+CGG + chr3_1:74614638-74614657 Msa0375030:intron 50.0%
CTCCGGTTCTTAGGGGAAAA+GGG - chr3_1:74614643-74614662 None:intergenic 50.0%
! CTTTTCCCCTAAGAACCGGA+GGG + chr3_1:74614642-74614661 Msa0375030:intron 50.0%
CTTAACCCTCCGGTTCTTAG+GGG - chr3_1:74614650-74614669 None:intergenic 50.0%
!!! GCGTGCTGAGTTTTGAACAG+TGG + chr3_1:74614761-74614780 Msa0375030:intron 50.0%
CAGGGTTCGAATCCTGACAA+GGG - chr3_1:74614851-74614870 None:intergenic 50.0%
TATCAAGGATCGTGGGGGTT+GGG - chr3_1:74614920-74614939 None:intergenic 50.0%
ATATCAAGGATCGTGGGGGT+TGG - chr3_1:74614921-74614940 None:intergenic 50.0%
CCCCACGATCCTTGATATTG+AGG + chr3_1:74614923-74614942 Msa0375030:intron 50.0%
! ATCGCCCGTGACTACGTTTT+AGG - chr3_1:74614968-74614987 None:intergenic 50.0%
! CATTGAGGGGCATACAAGCA+AGG - chr3_1:74615008-74615027 None:intergenic 50.0%
CCCAGCTTCTGGTGTACTTA+AGG + chr3_1:74615419-74615438 Msa0375030:CDS 50.0%
CCCTTAAGTACACCAGAAGC+TGG - chr3_1:74615423-74615442 None:intergenic 50.0%
GGGAATGTTTGTGCCCAAAC+TGG + chr3_1:74615440-74615459 Msa0375030:CDS 50.0%
ATGTTTGTGCCCAAACTGGC+TGG + chr3_1:74615444-74615463 Msa0375030:CDS 50.0%
!! AAGGGCAATAGCATCGGCTA+CGG - chr3_1:74615478-74615497 None:intergenic 50.0%
! AGCCGATGCTATTGCCCTTT+TGG + chr3_1:74615479-74615498 Msa0375030:CDS 50.0%
! GCCGATGCTATTGCCCTTTT+GGG + chr3_1:74615480-74615499 Msa0375030:CDS 50.0%
CCCCAAAAGGGCAATAGCAT+CGG - chr3_1:74615484-74615503 None:intergenic 50.0%
! CCGATGCTATTGCCCTTTTG+GGG + chr3_1:74615481-74615500 Msa0375030:CDS 50.0%
! CGATGCTATTGCCCTTTTGG+GGG + chr3_1:74615482-74615501 Msa0375030:CDS 50.0%
CATGATAAGGGCCCCCAAAA+GGG - chr3_1:74615496-74615515 None:intergenic 50.0%
ATAGCACAAGAGCAGAGTGG+AGG - chr3_1:74615690-74615709 None:intergenic 50.0%
GGCATCAATGTAAGCCACTC+AGG + chr3_1:74615736-74615755 Msa0375030:intron 50.0%
TGCTCTGCCAATGACCTATC+TGG + chr3_1:74616013-74616032 Msa0375030:CDS 50.0%
CTCCGCTTCTTTCCTTCTCA+AGG + chr3_1:74616072-74616091 Msa0375030:CDS 50.0%
TGCAGGACAGTACATCATGC+AGG + chr3_1:74616318-74616337 Msa0375030:CDS 50.0%
!! CTTGCTGTTGCCATCATTGG+TGG + chr3_1:74616493-74616512 Msa0375030:CDS 50.0%
! GCCATCATTGGTGGTTCTTC+TGG + chr3_1:74616502-74616521 Msa0375030:CDS 50.0%
GCCAGAAGAACCACCAATGA+TGG - chr3_1:74616506-74616525 None:intergenic 50.0%
TGGAGCTAACCACGGATACG+AGG + chr3_1:74613498-74613517 Msa0375030:CDS 55.0%
TAGAAGCAGGGCTAGAACCC+TGG - chr3_1:74613576-74613595 None:intergenic 55.0%
GCAGCTGACATACCTGAAGG+TGG + chr3_1:74614138-74614157 Msa0375030:CDS 55.0%
TGGGCAGGAGTTCTGTTGAC+TGG + chr3_1:74614340-74614359 Msa0375030:CDS 55.0%
CTTACCTATCGGTGGAACCG+CGG + chr3_1:74614600-74614619 Msa0375030:intron 55.0%
CCTCCGGTTCTTAGGGGAAA+AGG - chr3_1:74614644-74614663 None:intergenic 55.0%
! CCTTTTCCCCTAAGAACCGG+AGG + chr3_1:74614641-74614660 Msa0375030:intron 55.0%
GAGTGGTAGCCGTGAACTAG+AGG - chr3_1:74614693-74614712 None:intergenic 55.0%
CCAGGGTTCGAATCCTGACA+AGG - chr3_1:74614852-74614871 None:intergenic 55.0%
CCTTGTCAGGATTCGAACCC+TGG + chr3_1:74614849-74614868 Msa0375030:intron 55.0%
ATCAAGGATCGTGGGGGTTG+GGG - chr3_1:74614919-74614938 None:intergenic 55.0%
GCTCCTTCACCAGCCAGTTT+GGG - chr3_1:74615456-74615475 None:intergenic 55.0%
GCATGATAAGGGCCCCCAAA+AGG - chr3_1:74615497-74615516 None:intergenic 55.0%
TCCTGAGGCAAGCAGTGCTA+TGG - chr3_1:74616272-74616291 None:intergenic 55.0%
TGATCCGCGGTTCCACCGAT+AGG - chr3_1:74614607-74614626 None:intergenic 60.0%
TCAAGGATCGTGGGGGTTGG+GGG - chr3_1:74614918-74614937 None:intergenic 60.0%
GTGCCCAAACTGGCTGGTGA+AGG + chr3_1:74615450-74615469 Msa0375030:CDS 60.0%
GGCTCCTTCACCAGCCAGTT+TGG - chr3_1:74615457-74615476 None:intergenic 60.0%
GCCATAGCACTGCTTGCCTC+AGG + chr3_1:74616268-74616287 Msa0375030:CDS 60.0%
GGGTTGGGGGGTAGCTCACT+TGG - chr3_1:74614905-74614924 None:intergenic 65.0%
CAAGGATCGTGGGGGTTGGG+GGG - chr3_1:74614917-74614936 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 74612821 74617205 74612821 ID=Msa0375030;Name=Msa0375030
chr3_1 mRNA 74612821 74617205 74612821 ID=Msa0375030-mRNA-1;Parent=Msa0375030;Name=Msa0375030-mRNA-1;_AED=0.10;_eAED=0.10;_QI=35|0.91|0.92|1|1|1|13|31|529
chr3_1 exon 74612821 74612930 74612821 ID=Msa0375030-mRNA-1:exon:17332;Parent=Msa0375030-mRNA-1
chr3_1 exon 74613090 74613174 74613090 ID=Msa0375030-mRNA-1:exon:17333;Parent=Msa0375030-mRNA-1
chr3_1 exon 74613479 74613519 74613479 ID=Msa0375030-mRNA-1:exon:17334;Parent=Msa0375030-mRNA-1
chr3_1 exon 74613674 74613752 74613674 ID=Msa0375030-mRNA-1:exon:17335;Parent=Msa0375030-mRNA-1
chr3_1 exon 74614052 74614159 74614052 ID=Msa0375030-mRNA-1:exon:17336;Parent=Msa0375030-mRNA-1
chr3_1 exon 74614293 74614402 74614293 ID=Msa0375030-mRNA-1:exon:17337;Parent=Msa0375030-mRNA-1
chr3_1 exon 74615336 74615517 74615336 ID=Msa0375030-mRNA-1:exon:17338;Parent=Msa0375030-mRNA-1
chr3_1 exon 74615675 74615744 74615675 ID=Msa0375030-mRNA-1:exon:17339;Parent=Msa0375030-mRNA-1
chr3_1 exon 74615920 74616093 74615920 ID=Msa0375030-mRNA-1:exon:17340;Parent=Msa0375030-mRNA-1
chr3_1 exon 74616235 74616339 74616235 ID=Msa0375030-mRNA-1:exon:17341;Parent=Msa0375030-mRNA-1
chr3_1 exon 74616421 74616552 74616421 ID=Msa0375030-mRNA-1:exon:17342;Parent=Msa0375030-mRNA-1
chr3_1 exon 74616649 74616744 74616649 ID=Msa0375030-mRNA-1:exon:17343;Parent=Msa0375030-mRNA-1
chr3_1 exon 74616842 74617205 74616842 ID=Msa0375030-mRNA-1:exon:17344;Parent=Msa0375030-mRNA-1
chr3_1 five_prime_UTR 74612821 74612855 74612821 ID=Msa0375030-mRNA-1:five_prime_utr;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74612856 74612930 74612856 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74613090 74613174 74613090 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74613479 74613519 74613479 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74613674 74613752 74613674 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74614052 74614159 74614052 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74614293 74614402 74614293 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74615336 74615517 74615336 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74615675 74615744 74615675 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74615920 74616093 74615920 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74616235 74616339 74616235 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74616421 74616552 74616421 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74616649 74616744 74616649 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 CDS 74616842 74617174 74616842 ID=Msa0375030-mRNA-1:cds;Parent=Msa0375030-mRNA-1
chr3_1 three_prime_UTR 74617175 74617205 74617175 ID=Msa0375030-mRNA-1:three_prime_utr;Parent=Msa0375030-mRNA-1
Gene Sequence

>Msa0375030

ATGGCAGACTTGTTACAGCAGCAGCAGCAACAACAACAACATCAAGTTATGGAAACATCCTCAAATCATGATGAGACACAAAAATCTGGATGGAGAAAGTTTTTGCCATATATAGGCCCTGGTTTTCTTGTTTCCTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATTTGCAAGCTGGAGCTAACCACGGATACGAGTTGCTGTGGTTGGTACTTATTGGACTCATATTCGCGCTTATAATTCAGTCATTGGCTGCAAATCTTGGCGTAACCACTGGCAAACACCTTTCAGAAGTATGTAAAGTTGAATATCCATTATTTGTGAAGTATTGCTTATGGTTATTAGCAGAGGTTGCTGTCATAGCAGCTGACATACCTGAAGGTGTGATTGGGACAGCCTTTGCTCTCAACATACTATTCAACATCCCATTATGGGCAGGAGTTCTGTTGACTGGCTTCAGCACTCTCTTGCTTTTGAGTCTGCAGAGGTTTGGGGTGAGGAAGTTGGAACTACTGATAACAATCCTAGTATTTGTAATGGCTGCATGTTTCTTTGCTGAAATGAGCTATGTAAATCCCCCAGCTTCTGGTGTACTTAAGGGAATGTTTGTGCCCAAACTGGCTGGTGAAGGAGCCGTAGCCGATGCTATTGCCCTTTTGGGGGCCCTTATCATGCCGCACAATCTTTTCCTCCACTCTGCTCTTGTGCTATCTAGAAAAGTACCTAATTCTGTGAGAGGCATCAATGAAGCATGTAGATATTTCCTCTATGAGAGTGGATTCGCTTTGTTTGTGGCGTTTTTAATCAATGTTGCAATGATTTCTGTGTCGGGCACTGTCTGCTCTGCCAATGACCTATCTGGAGACAATGTTGAACGCTGCAATGATCTCACCCTTAACTCCGCTTCTTTCCTTCTCAAGAATGTGTTGGGACGATCGAGCTCAACCATTTATGCCATAGCACTGCTTGCCTCAGGACAAAGTTCTACCATCACAGGAACTTATGCAGGACAGTACATCATGCAGGGTTTCTTAGACATAAGGATGAAAAGATGGAAAAGGAACTTGATGACTAGATGCATTGCCATAGCACCTAGTCTTGCTGTTGCCATCATTGGTGGTTCTTCTGGCTCTAGTCGCCTTATCATCATCGCATCGATGATACTTTCTTTTGAGCTTCCATTCGCCTTAATTCCACTCCTTAAGTTTAGCAGCAGCACAACCAAAATGGGACCTCACAAGAATTCTATTATTATCATTACAATCTCATGGATACTAGGTTTTGGAATCATTAGTATCAATGTGTACTACCTCAGTACTGCCTTTGTGAAGTGGATAATACATAGTAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATTATAGTGTTTCCTCTAATGGCAGTTTATATTGCCTCAGTTATCTACCTAACCTTCAGAAAAGACACTGTTGAGACGTTCATCGAGACGAAAAATGATACAGTAATGCAAAACCAAGTGGAAAAAGGAATTGTGGATAATGGTCAGTTAGAGTTGAGCCATGTTCCTTATAGAGAAGATTTAGCTGATATCCCGCTACCAGAATAA

Protein sequence

>Msa0375030

MADLLQQQQQQQQHQVMETSSNHDETQKSGWRKFLPYIGPGFLVSLAYLDPGNMETDLQAGANHGYELLWLVLIGLIFALIIQSLAANLGVTTGKHLSEVCKVEYPLFVKYCLWLLAEVAVIAADIPEGVIGTAFALNILFNIPLWAGVLLTGFSTLLLLSLQRFGVRKLELLITILVFVMAACFFAEMSYVNPPASGVLKGMFVPKLAGEGAVADAIALLGALIMPHNLFLHSALVLSRKVPNSVRGINEACRYFLYESGFALFVAFLINVAMISVSGTVCSANDLSGDNVERCNDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDIRMKRWKRNLMTRCIAIAPSLAVAIIGGSSGSSRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIIIITISWILGFGIISINVYYLSTAFVKWIIHSSLPKVANVFIGIIVFPLMAVYIASVIYLTFRKDTVETFIETKNDTVMQNQVEKGIVDNGQLELSHVPYREDLADIPLPE*