Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57249.t1 | XP_003588994.1 | 94.5 | 217 | 11 | 1 | 10 | 225 | 89 | 305 | 8.10E-71 | 276.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57249.t1 | Q9SZI6 | 72.5 | 51 | 12 | 1 | 96 | 144 | 186 | 236 | 2.3e-13 | 77.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57249.t1 | G7I9Y4 | 94.5 | 217 | 11 | 1 | 10 | 225 | 89 | 305 | 5.8e-71 | 276.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene57249.t1 | TF | C2C2-GATA |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene57249 | 0.850065 | 2.16E-60 | -1.69E-46 |
MS.gene049171 | MS.gene57249 | 0.917809 | 3.38E-86 | -1.69E-46 |
MS.gene049173 | MS.gene57249 | 0.837637 | 4.62E-57 | -1.69E-46 |
MS.gene049217 | MS.gene57249 | 0.849543 | 3.02E-60 | -1.69E-46 |
MS.gene049222 | MS.gene57249 | 0.88857 | 5.25E-73 | -1.69E-46 |
MS.gene049232 | MS.gene57249 | 0.851358 | 9.35E-61 | -1.69E-46 |
MS.gene049257 | MS.gene57249 | 0.830636 | 2.63E-55 | -1.69E-46 |
MS.gene049285 | MS.gene57249 | 0.888594 | 5.14E-73 | -1.69E-46 |
MS.gene049320 | MS.gene57249 | 0.858808 | 6.39E-63 | -1.69E-46 |
MS.gene04939 | MS.gene57249 | 0.818774 | 1.64E-52 | -1.69E-46 |
MS.gene049609 | MS.gene57249 | 0.889705 | 1.91E-73 | -1.69E-46 |
MS.gene049627 | MS.gene57249 | 0.805608 | 1.23E-49 | -1.69E-46 |
MS.gene049633 | MS.gene57249 | 0.862318 | 5.52E-64 | -1.69E-46 |
MS.gene049805 | MS.gene57249 | 0.867531 | 1.28E-65 | -1.69E-46 |
MS.gene049865 | MS.gene57249 | 0.801366 | 9.31E-49 | -1.69E-46 |
MS.gene05010 | MS.gene57249 | 0.845087 | 5.05E-59 | -1.69E-46 |
MS.gene050163 | MS.gene57249 | 0.84652 | 2.06E-59 | -1.69E-46 |
MS.gene050165 | MS.gene57249 | 0.837416 | 5.27E-57 | -1.69E-46 |
MS.gene050170 | MS.gene57249 | 0.878411 | 2.87E-69 | -1.69E-46 |
MS.gene050323 | MS.gene57249 | 0.894534 | 2.25E-75 | -1.69E-46 |
MS.gene050333 | MS.gene57249 | 0.835049 | 2.10E-56 | -1.69E-46 |
MS.gene050338 | MS.gene57249 | -0.801408 | 9.13E-49 | -1.69E-46 |
MS.gene050381 | MS.gene57249 | -0.800372 | 1.49E-48 | -1.69E-46 |
MS.gene050444 | MS.gene57249 | 0.826609 | 2.47E-54 | -1.69E-46 |
MS.gene050496 | MS.gene57249 | 0.852011 | 6.10E-61 | -1.69E-46 |
MS.gene050502 | MS.gene57249 | 0.816157 | 6.39E-52 | -1.69E-46 |
MS.gene050504 | MS.gene57249 | 0.875431 | 3.10E-68 | -1.69E-46 |
MS.gene050518 | MS.gene57249 | 0.846487 | 2.11E-59 | -1.69E-46 |
MS.gene050538 | MS.gene57249 | 0.83786 | 4.05E-57 | -1.69E-46 |
MS.gene050577 | MS.gene57249 | 0.876748 | 1.09E-68 | -1.69E-46 |
MS.gene050593 | MS.gene57249 | 0.863524 | 2.34E-64 | -1.69E-46 |
MS.gene050612 | MS.gene57249 | 0.862927 | 3.58E-64 | -1.69E-46 |
MS.gene050647 | MS.gene57249 | -0.819526 | 1.11E-52 | -1.69E-46 |
MS.gene050675 | MS.gene57249 | 0.848108 | 7.56E-60 | -1.69E-46 |
MS.gene050690 | MS.gene57249 | 0.800551 | 1.37E-48 | -1.69E-46 |
MS.gene050699 | MS.gene57249 | 0.863777 | 1.95E-64 | -1.69E-46 |
MS.gene050747 | MS.gene57249 | 0.877401 | 6.47E-69 | -1.69E-46 |
MS.gene050772 | MS.gene57249 | 0.876955 | 9.25E-69 | -1.69E-46 |
MS.gene05080 | MS.gene57249 | 0.855506 | 6.03E-62 | -1.69E-46 |
MS.gene05081 | MS.gene57249 | 0.867895 | 9.77E-66 | -1.69E-46 |
MS.gene050868 | MS.gene57249 | 0.875892 | 2.15E-68 | -1.69E-46 |
MS.gene050871 | MS.gene57249 | 0.874752 | 5.28E-68 | -1.69E-46 |
MS.gene050904 | MS.gene57249 | 0.837659 | 4.56E-57 | -1.69E-46 |
MS.gene050950 | MS.gene57249 | 0.872 | 4.45E-67 | -1.69E-46 |
MS.gene050986 | MS.gene57249 | 0.851561 | 8.19E-61 | -1.69E-46 |
MS.gene05100 | MS.gene57249 | 0.828123 | 1.07E-54 | -1.69E-46 |
MS.gene05105 | MS.gene57249 | 0.802708 | 4.93E-49 | -1.69E-46 |
MS.gene051268 | MS.gene57249 | 0.830365 | 3.06E-55 | -1.69E-46 |
MS.gene051317 | MS.gene57249 | 0.85038 | 1.76E-60 | -1.69E-46 |
MS.gene051364 | MS.gene57249 | -0.809808 | 1.58E-50 | -1.69E-46 |
MS.gene051387 | MS.gene57249 | 0.834974 | 2.20E-56 | -1.69E-46 |
MS.gene051551 | MS.gene57249 | 0.849089 | 4.04E-60 | -1.69E-46 |
MS.gene051651 | MS.gene57249 | -0.805204 | 1.49E-49 | -1.69E-46 |
MS.gene051666 | MS.gene57249 | 0.863776 | 1.96E-64 | -1.69E-46 |
MS.gene051692 | MS.gene57249 | 0.800695 | 1.28E-48 | -1.69E-46 |
MS.gene051694 | MS.gene57249 | 0.820682 | 6.03E-53 | -1.69E-46 |
MS.gene051734 | MS.gene57249 | 0.858012 | 1.10E-62 | -1.69E-46 |
MS.gene051810 | MS.gene57249 | 0.808281 | 3.34E-50 | -1.69E-46 |
MS.gene051838 | MS.gene57249 | 0.872212 | 3.78E-67 | -1.69E-46 |
MS.gene051858 | MS.gene57249 | 0.838521 | 2.74E-57 | -1.69E-46 |
MS.gene051874 | MS.gene57249 | 0.817982 | 2.49E-52 | -1.69E-46 |
MS.gene051941 | MS.gene57249 | 0.82249 | 2.30E-53 | -1.69E-46 |
MS.gene051949 | MS.gene57249 | 0.800385 | 1.48E-48 | -1.69E-46 |
MS.gene052129 | MS.gene57249 | -0.800831 | 1.20E-48 | -1.69E-46 |
MS.gene052164 | MS.gene57249 | 0.860321 | 2.24E-63 | -1.69E-46 |
MS.gene052271 | MS.gene57249 | 0.801635 | 8.21E-49 | -1.69E-46 |
MS.gene052346 | MS.gene57249 | 0.800257 | 1.57E-48 | -1.69E-46 |
MS.gene052379 | MS.gene57249 | 0.806854 | 6.72E-50 | -1.69E-46 |
MS.gene05240 | MS.gene57249 | -0.80918 | 2.15E-50 | -1.69E-46 |
MS.gene052414 | MS.gene57249 | 0.81387 | 2.06E-51 | -1.69E-46 |
MS.gene052421 | MS.gene57249 | 0.816811 | 4.56E-52 | -1.69E-46 |
MS.gene052481 | MS.gene57249 | 0.810709 | 1.01E-50 | -1.69E-46 |
MS.gene052482 | MS.gene57249 | 0.864415 | 1.24E-64 | -1.69E-46 |
MS.gene052484 | MS.gene57249 | 0.812913 | 3.34E-51 | -1.69E-46 |
MS.gene052486 | MS.gene57249 | 0.866505 | 2.71E-65 | -1.69E-46 |
MS.gene052501 | MS.gene57249 | 0.866858 | 2.10E-65 | -1.69E-46 |
MS.gene052503 | MS.gene57249 | 0.902118 | 1.34E-78 | -1.69E-46 |
MS.gene052504 | MS.gene57249 | 0.80179 | 7.62E-49 | -1.69E-46 |
MS.gene052505 | MS.gene57249 | 0.850114 | 2.09E-60 | -1.69E-46 |
MS.gene052506 | MS.gene57249 | 0.852348 | 4.90E-61 | -1.69E-46 |
MS.gene052606 | MS.gene57249 | -0.802209 | 6.25E-49 | -1.69E-46 |
MS.gene052615 | MS.gene57249 | 0.846195 | 2.53E-59 | -1.69E-46 |
MS.gene052820 | MS.gene57249 | 0.804769 | 1.84E-49 | -1.69E-46 |
MS.gene052822 | MS.gene57249 | 0.854014 | 1.63E-61 | -1.69E-46 |
MS.gene052823 | MS.gene57249 | 0.901068 | 3.89E-78 | -1.69E-46 |
MS.gene052825 | MS.gene57249 | 0.89928 | 2.32E-77 | -1.69E-46 |
MS.gene052870 | MS.gene57249 | 0.849705 | 2.72E-60 | -1.69E-46 |
MS.gene052872 | MS.gene57249 | 0.859509 | 3.94E-63 | -1.69E-46 |
MS.gene052966 | MS.gene57249 | 0.873967 | 9.75E-68 | -1.69E-46 |
MS.gene052982 | MS.gene57249 | 0.818618 | 1.78E-52 | -1.69E-46 |
MS.gene053103 | MS.gene57249 | 0.804207 | 2.41E-49 | -1.69E-46 |
MS.gene053104 | MS.gene57249 | 0.837157 | 6.13E-57 | -1.69E-46 |
MS.gene053203 | MS.gene57249 | 0.88414 | 2.47E-71 | -1.69E-46 |
MS.gene053207 | MS.gene57249 | 0.83118 | 1.93E-55 | -1.69E-46 |
MS.gene053213 | MS.gene57249 | 0.86895 | 4.46E-66 | -1.69E-46 |
MS.gene053286 | MS.gene57249 | 0.865527 | 5.54E-65 | -1.69E-46 |
MS.gene053420 | MS.gene57249 | -0.807554 | 4.78E-50 | -1.69E-46 |
MS.gene053421 | MS.gene57249 | -0.804853 | 1.77E-49 | -1.69E-46 |
MS.gene053436 | MS.gene57249 | 0.845321 | 4.37E-59 | -1.69E-46 |
MS.gene053449 | MS.gene57249 | 0.812576 | 3.95E-51 | -1.69E-46 |
MS.gene053479 | MS.gene57249 | 0.86573 | 4.78E-65 | -1.69E-46 |
MS.gene053480 | MS.gene57249 | 0.861665 | 8.75E-64 | -1.69E-46 |
MS.gene053574 | MS.gene57249 | 0.873655 | 1.24E-67 | -1.69E-46 |
MS.gene053579 | MS.gene57249 | 0.817315 | 3.51E-52 | -1.69E-46 |
MS.gene053626 | MS.gene57249 | 0.830252 | 3.26E-55 | -1.69E-46 |
MS.gene053632 | MS.gene57249 | 0.843039 | 1.79E-58 | -1.69E-46 |
MS.gene053633 | MS.gene57249 | 0.808269 | 3.37E-50 | -1.69E-46 |
MS.gene053824 | MS.gene57249 | 0.9058 | 2.93E-80 | -1.69E-46 |
MS.gene053916 | MS.gene57249 | 0.819828 | 9.46E-53 | -1.69E-46 |
MS.gene054003 | MS.gene57249 | 0.81593 | 7.18E-52 | -1.69E-46 |
MS.gene054344 | MS.gene57249 | 0.810742 | 9.91E-51 | -1.69E-46 |
MS.gene054408 | MS.gene57249 | 0.852389 | 4.77E-61 | -1.69E-46 |
MS.gene054595 | MS.gene57249 | 0.878703 | 2.27E-69 | -1.69E-46 |
MS.gene054600 | MS.gene57249 | 0.864824 | 9.21E-65 | -1.69E-46 |
MS.gene054642 | MS.gene57249 | 0.856956 | 2.26E-62 | -1.69E-46 |
MS.gene054706 | MS.gene57249 | -0.844444 | 7.53E-59 | -1.69E-46 |
MS.gene05470 | MS.gene57249 | 0.883635 | 3.80E-71 | -1.69E-46 |
MS.gene054884 | MS.gene57249 | -0.831433 | 1.67E-55 | -1.69E-46 |
MS.gene054927 | MS.gene57249 | 0.847166 | 1.37E-59 | -1.69E-46 |
MS.gene05494 | MS.gene57249 | 0.808256 | 3.39E-50 | -1.69E-46 |
MS.gene054954 | MS.gene57249 | 0.880908 | 3.73E-70 | -1.69E-46 |
MS.gene05505 | MS.gene57249 | 0.824757 | 6.79E-54 | -1.69E-46 |
MS.gene055154 | MS.gene57249 | -0.800225 | 1.59E-48 | -1.69E-46 |
MS.gene055206 | MS.gene57249 | 0.866443 | 2.84E-65 | -1.69E-46 |
MS.gene055212 | MS.gene57249 | 0.812376 | 4.37E-51 | -1.69E-46 |
MS.gene055224 | MS.gene57249 | 0.849078 | 4.07E-60 | -1.69E-46 |
MS.gene055289 | MS.gene57249 | 0.835516 | 1.60E-56 | -1.69E-46 |
MS.gene055362 | MS.gene57249 | 0.873798 | 1.11E-67 | -1.69E-46 |
MS.gene055502 | MS.gene57249 | 0.898549 | 4.76E-77 | -1.69E-46 |
MS.gene055577 | MS.gene57249 | 0.890581 | 8.66E-74 | -1.69E-46 |
MS.gene055722 | MS.gene57249 | 0.847151 | 1.39E-59 | -1.69E-46 |
MS.gene055741 | MS.gene57249 | 0.810382 | 1.18E-50 | -1.69E-46 |
MS.gene055744 | MS.gene57249 | 0.803555 | 3.30E-49 | -1.69E-46 |
MS.gene055748 | MS.gene57249 | 0.869232 | 3.61E-66 | -1.69E-46 |
MS.gene055750 | MS.gene57249 | 0.863795 | 1.93E-64 | -1.69E-46 |
MS.gene055751 | MS.gene57249 | 0.863816 | 1.90E-64 | -1.69E-46 |
MS.gene05589 | MS.gene57249 | 0.899072 | 2.85E-77 | -1.69E-46 |
MS.gene055941 | MS.gene57249 | 0.884107 | 2.54E-71 | -1.69E-46 |
MS.gene056040 | MS.gene57249 | 0.820236 | 7.63E-53 | -1.69E-46 |
MS.gene056046 | MS.gene57249 | 0.808208 | 3.47E-50 | -1.69E-46 |
MS.gene056166 | MS.gene57249 | 0.856415 | 3.27E-62 | -1.69E-46 |
MS.gene056374 | MS.gene57249 | 0.833669 | 4.67E-56 | -1.69E-46 |
MS.gene056387 | MS.gene57249 | 0.848726 | 5.10E-60 | -1.69E-46 |
MS.gene056409 | MS.gene57249 | 0.803261 | 3.79E-49 | -1.69E-46 |
MS.gene056446 | MS.gene57249 | 0.808073 | 3.70E-50 | -1.69E-46 |
MS.gene056504 | MS.gene57249 | 0.904672 | 9.61E-80 | -1.69E-46 |
MS.gene056510 | MS.gene57249 | 0.866635 | 2.47E-65 | -1.69E-46 |
MS.gene056549 | MS.gene57249 | 0.836298 | 1.02E-56 | -1.69E-46 |
MS.gene056550 | MS.gene57249 | -0.800555 | 1.36E-48 | -1.69E-46 |
MS.gene056590 | MS.gene57249 | -0.8216 | 3.70E-53 | -1.69E-46 |
MS.gene056591 | MS.gene57249 | -0.822772 | 1.98E-53 | -1.69E-46 |
MS.gene056610 | MS.gene57249 | 0.832742 | 7.95E-56 | -1.69E-46 |
MS.gene05664 | MS.gene57249 | 0.800832 | 1.20E-48 | -1.69E-46 |
MS.gene056657 | MS.gene57249 | 0.869119 | 3.93E-66 | -1.69E-46 |
MS.gene056692 | MS.gene57249 | 0.872377 | 3.33E-67 | -1.69E-46 |
MS.gene056694 | MS.gene57249 | -0.808018 | 3.81E-50 | -1.69E-46 |
MS.gene056697 | MS.gene57249 | -0.801153 | 1.03E-48 | -1.69E-46 |
MS.gene056856 | MS.gene57249 | -0.801798 | 7.60E-49 | -1.69E-46 |
MS.gene056877 | MS.gene57249 | 0.841886 | 3.62E-58 | -1.69E-46 |
MS.gene056898 | MS.gene57249 | 0.817727 | 2.84E-52 | -1.69E-46 |
MS.gene056946 | MS.gene57249 | 0.83903 | 2.02E-57 | -1.69E-46 |
MS.gene057048 | MS.gene57249 | 0.81446 | 1.52E-51 | -1.69E-46 |
MS.gene057076 | MS.gene57249 | 0.82722 | 1.76E-54 | -1.69E-46 |
MS.gene057086 | MS.gene57249 | 0.850163 | 2.03E-60 | -1.69E-46 |
MS.gene057196 | MS.gene57249 | 0.810502 | 1.12E-50 | -1.69E-46 |
MS.gene057331 | MS.gene57249 | 0.831237 | 1.87E-55 | -1.69E-46 |
MS.gene057332 | MS.gene57249 | 0.834982 | 2.19E-56 | -1.69E-46 |
MS.gene057416 | MS.gene57249 | 0.870646 | 1.25E-66 | -1.69E-46 |
MS.gene057658 | MS.gene57249 | 0.905941 | 2.52E-80 | -1.69E-46 |
MS.gene057734 | MS.gene57249 | 0.804944 | 1.69E-49 | -1.69E-46 |
MS.gene057831 | MS.gene57249 | 0.881563 | 2.16E-70 | -1.69E-46 |
MS.gene057856 | MS.gene57249 | 0.851466 | 8.71E-61 | -1.69E-46 |
MS.gene057857 | MS.gene57249 | 0.826617 | 2.46E-54 | -1.69E-46 |
MS.gene05787 | MS.gene57249 | 0.824691 | 7.04E-54 | -1.69E-46 |
MS.gene057926 | MS.gene57249 | 0.81896 | 1.49E-52 | -1.69E-46 |
MS.gene058019 | MS.gene57249 | 0.862746 | 4.07E-64 | -1.69E-46 |
MS.gene058157 | MS.gene57249 | 0.833828 | 4.26E-56 | -1.69E-46 |
MS.gene058334 | MS.gene57249 | -0.838252 | 3.21E-57 | -1.69E-46 |
MS.gene058338 | MS.gene57249 | 0.865511 | 5.60E-65 | -1.69E-46 |
MS.gene058376 | MS.gene57249 | 0.830114 | 3.52E-55 | -1.69E-46 |
MS.gene05837 | MS.gene57249 | 0.876664 | 1.17E-68 | -1.69E-46 |
MS.gene058418 | MS.gene57249 | -0.815234 | 1.03E-51 | -1.69E-46 |
MS.gene058419 | MS.gene57249 | 0.892991 | 9.52E-75 | -1.69E-46 |
MS.gene058444 | MS.gene57249 | 0.841233 | 5.38E-58 | -1.69E-46 |
MS.gene058544 | MS.gene57249 | 0.883792 | 3.33E-71 | -1.69E-46 |
MS.gene058700 | MS.gene57249 | 0.805897 | 1.07E-49 | -1.69E-46 |
MS.gene058773 | MS.gene57249 | 0.857229 | 1.88E-62 | -1.69E-46 |
MS.gene058838 | MS.gene57249 | 0.91547 | 5.67E-85 | -1.69E-46 |
MS.gene05883 | MS.gene57249 | 0.824255 | 8.91E-54 | -1.69E-46 |
MS.gene059022 | MS.gene57249 | 0.873976 | 9.68E-68 | -1.69E-46 |
MS.gene059023 | MS.gene57249 | 0.908282 | 2.03E-81 | -1.69E-46 |
MS.gene05912 | MS.gene57249 | 0.857878 | 1.21E-62 | -1.69E-46 |
MS.gene05913 | MS.gene57249 | 0.857357 | 1.72E-62 | -1.69E-46 |
MS.gene05914 | MS.gene57249 | 0.852349 | 4.89E-61 | -1.69E-46 |
MS.gene059303 | MS.gene57249 | 0.800481 | 1.41E-48 | -1.69E-46 |
MS.gene05934 | MS.gene57249 | 0.87626 | 1.61E-68 | -1.69E-46 |
MS.gene059367 | MS.gene57249 | 0.821156 | 4.69E-53 | -1.69E-46 |
MS.gene059455 | MS.gene57249 | 0.83275 | 7.91E-56 | -1.69E-46 |
MS.gene059526 | MS.gene57249 | -0.814903 | 1.22E-51 | -1.69E-46 |
MS.gene059536 | MS.gene57249 | 0.830415 | 2.97E-55 | -1.69E-46 |
MS.gene059667 | MS.gene57249 | 0.868212 | 7.72E-66 | -1.69E-46 |
MS.gene059677 | MS.gene57249 | 0.878064 | 3.80E-69 | -1.69E-46 |
MS.gene059718 | MS.gene57249 | 0.876402 | 1.44E-68 | -1.69E-46 |
MS.gene059756 | MS.gene57249 | 0.874044 | 9.18E-68 | -1.69E-46 |
MS.gene059801 | MS.gene57249 | 0.861491 | 9.88E-64 | -1.69E-46 |
MS.gene059837 | MS.gene57249 | 0.801876 | 7.32E-49 | -1.69E-46 |
MS.gene059865 | MS.gene57249 | 0.87161 | 5.99E-67 | -1.69E-46 |
MS.gene059902 | MS.gene57249 | 0.833562 | 4.97E-56 | -1.69E-46 |
MS.gene06000 | MS.gene57249 | 0.870023 | 2.00E-66 | -1.69E-46 |
MS.gene06027 | MS.gene57249 | 0.820569 | 6.40E-53 | -1.69E-46 |
MS.gene060482 | MS.gene57249 | 0.828833 | 7.22E-55 | -1.69E-46 |
MS.gene060485 | MS.gene57249 | 0.805999 | 1.02E-49 | -1.69E-46 |
MS.gene060595 | MS.gene57249 | -0.809687 | 1.67E-50 | -1.69E-46 |
MS.gene060703 | MS.gene57249 | 0.857073 | 2.09E-62 | -1.69E-46 |
MS.gene060762 | MS.gene57249 | 0.900299 | 8.42E-78 | -1.69E-46 |
MS.gene060778 | MS.gene57249 | 0.843482 | 1.36E-58 | -1.69E-46 |
MS.gene06077 | MS.gene57249 | 0.898731 | 3.98E-77 | -1.69E-46 |
MS.gene060804 | MS.gene57249 | 0.815026 | 1.14E-51 | -1.69E-46 |
MS.gene060823 | MS.gene57249 | -0.804667 | 1.93E-49 | -1.69E-46 |
MS.gene060835 | MS.gene57249 | 0.861648 | 8.85E-64 | -1.69E-46 |
MS.gene060837 | MS.gene57249 | 0.805357 | 1.39E-49 | -1.69E-46 |
MS.gene06092 | MS.gene57249 | 0.867411 | 1.40E-65 | -1.69E-46 |
MS.gene06097 | MS.gene57249 | 0.834398 | 3.07E-56 | -1.69E-46 |
MS.gene060982 | MS.gene57249 | 0.890302 | 1.11E-73 | -1.69E-46 |
MS.gene061041 | MS.gene57249 | 0.809744 | 1.63E-50 | -1.69E-46 |
MS.gene061044 | MS.gene57249 | -0.812657 | 3.80E-51 | -1.69E-46 |
MS.gene061150 | MS.gene57249 | 0.877199 | 7.61E-69 | -1.69E-46 |
MS.gene061231 | MS.gene57249 | 0.822049 | 2.92E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57249.t1 | MTR_1g016170 | 95.133 | 226 | 10 | 1 | 1 | 225 | 80 | 305 | 2.39e-135 | 382 |
MS.gene57249.t1 | MTR_3g050550 | 79.787 | 94 | 18 | 1 | 18 | 110 | 1 | 94 | 1.09e-44 | 145 |
MS.gene57249.t1 | MTR_3g050610 | 75.833 | 120 | 23 | 3 | 4 | 120 | 31 | 147 | 4.59e-42 | 140 |
MS.gene57249.t1 | MTR_2g038720 | 45.985 | 137 | 46 | 5 | 105 | 223 | 162 | 288 | 2.44e-16 | 76.6 |
MS.gene57249.t1 | MTR_4g121110 | 62.500 | 48 | 18 | 0 | 104 | 151 | 27 | 74 | 4.60e-16 | 72.8 |
MS.gene57249.t1 | MTR_4g126350 | 40.741 | 108 | 44 | 3 | 29 | 136 | 128 | 215 | 1.21e-15 | 74.7 |
MS.gene57249.t1 | MTR_7g112330 | 69.444 | 36 | 11 | 0 | 107 | 142 | 22 | 57 | 3.41e-13 | 64.7 |
MS.gene57249.t1 | MTR_5g020230 | 50.000 | 66 | 27 | 1 | 84 | 143 | 93 | 158 | 1.68e-12 | 65.1 |
MS.gene57249.t1 | MTR_1g094930 | 56.098 | 41 | 18 | 0 | 102 | 142 | 142 | 182 | 2.73e-11 | 61.6 |
MS.gene57249.t1 | MTR_1g094930 | 56.098 | 41 | 18 | 0 | 102 | 142 | 237 | 277 | 4.29e-11 | 62.0 |
MS.gene57249.t1 | MTR_8g077510 | 63.158 | 38 | 14 | 0 | 106 | 143 | 124 | 161 | 5.56e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57249.t1 | AT5G56860 | 41.538 | 130 | 50 | 6 | 29 | 140 | 142 | 263 | 8.68e-19 | 84.3 |
MS.gene57249.t1 | AT5G49300 | 66.667 | 45 | 15 | 0 | 103 | 147 | 32 | 76 | 2.14e-17 | 76.3 |
MS.gene57249.t1 | AT5G26930 | 66.667 | 42 | 14 | 0 | 103 | 144 | 22 | 63 | 3.74e-16 | 72.4 |
MS.gene57249.t1 | AT4G26150 | 40.179 | 112 | 37 | 3 | 29 | 138 | 147 | 230 | 7.21e-16 | 75.9 |
MS.gene57249.t1 | AT3G06740 | 66.667 | 42 | 14 | 0 | 104 | 145 | 38 | 79 | 9.62e-15 | 69.3 |
MS.gene57249.t1 | AT4G16141 | 68.293 | 41 | 13 | 0 | 104 | 144 | 34 | 74 | 1.56e-14 | 70.1 |
MS.gene57249.t1 | AT3G16870 | 57.143 | 56 | 20 | 1 | 104 | 159 | 39 | 90 | 2.97e-14 | 68.9 |
MS.gene57249.t1 | AT4G36620 | 58.333 | 48 | 20 | 0 | 103 | 150 | 71 | 118 | 1.43e-12 | 64.7 |
MS.gene57249.t1 | AT2G18380 | 68.293 | 41 | 12 | 1 | 107 | 146 | 92 | 132 | 3.28e-12 | 63.9 |
MS.gene57249.t1 | AT5G25830 | 55.556 | 45 | 20 | 0 | 98 | 142 | 210 | 254 | 1.53e-11 | 63.2 |
MS.gene57249.t1 | AT3G50870 | 33.058 | 121 | 68 | 4 | 106 | 223 | 151 | 261 | 2.16e-11 | 62.4 |
MS.gene57249.t1 | AT1G08010 | 56.000 | 50 | 21 | 1 | 93 | 142 | 207 | 255 | 3.63e-11 | 62.0 |
MS.gene57249.t1 | AT1G08010 | 56.000 | 50 | 21 | 1 | 93 | 142 | 207 | 255 | 3.63e-11 | 62.0 |
MS.gene57249.t1 | AT1G08010 | 56.000 | 50 | 21 | 1 | 93 | 142 | 207 | 255 | 3.63e-11 | 62.0 |
Find 52 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTGTTTGGTCTCATTAT+TGG | 0.223553 | 1.4:-6191684 | None:intergenic |
TGTTACTACTAGGGCTTGTT+TGG | 0.323214 | 1.4:-6191806 | None:intergenic |
ATGATGAGACCTAGTAATTA+TGG | 0.329839 | 1.4:+6191750 | MS.gene57249:CDS |
TTGTTACCGCTGTTACTACT+AGG | 0.336848 | 1.4:-6191816 | None:intergenic |
GTCCAAGAAGTCAAAATATA+AGG | 0.340331 | 1.4:+6191778 | MS.gene57249:CDS |
TTTGCAATGCTTGTGGAATC+AGG | 0.357272 | 1.4:+6192494 | MS.gene57249:CDS |
TCATCATAATCATAATCTAA+TGG | 0.373491 | 1.4:-6192706 | None:intergenic |
CACTCCTCCAAAGTGGGGTA+TGG | 0.383367 | 1.4:-6191872 | None:intergenic |
CACAAATTTATCATCATCCT+TGG | 0.395360 | 1.4:+6191554 | MS.gene57249:CDS |
AGCAACGGCGGCACGACTTC+TGG | 0.401059 | 1.4:+6192732 | MS.gene57249:CDS |
GTGGCTGCAATATTGTTGTT+TGG | 0.421269 | 1.4:-6191696 | None:intergenic |
GGCTGAAGCTGCCAATGGTT+TGG | 0.422143 | 1.4:+6192540 | MS.gene57249:CDS |
CTTTGGAGGAGTGGCCCTAT+GGG | 0.439971 | 1.4:+6191882 | MS.gene57249:CDS |
ACTTTGGAGGAGTGGCCCTA+TGG | 0.441269 | 1.4:+6191881 | MS.gene57249:CDS |
CGAATTACCTTTGGACCCAT+AGG | 0.444966 | 1.4:-6191897 | None:intergenic |
TGAGTCACGGGTCTGAGAAA+TGG | 0.451328 | 1.4:+6191601 | MS.gene57249:CDS |
CTTCTGGTGGATATATCTTC+TGG | 0.451597 | 1.4:+6192748 | MS.gene57249:CDS |
ACAGCGGTAACAACACCGTT+AGG | 0.456940 | 1.4:+6191826 | MS.gene57249:CDS |
TTTATCATCATCCTTGGAGC+TGG | 0.479939 | 1.4:+6191560 | MS.gene57249:CDS |
CTTGATAGCTTTGTCAGTAG+TGG | 0.482210 | 1.4:-6191715 | None:intergenic |
ACTCCTCCAAAGTGGGGTAT+GGG | 0.495268 | 1.4:-6191871 | None:intergenic |
TTCTTAGTCTTGAATTGTGT+AGG | 0.495944 | 1.4:-6192601 | None:intergenic |
TAATTACTAGGTCTCATCAT+TGG | 0.503467 | 1.4:-6191747 | None:intergenic |
GCTGCTATCTTCCAGCTCCA+AGG | 0.513483 | 1.4:-6191571 | None:intergenic |
TGGTCTCATTATTGGAGTTG+TGG | 0.515285 | 1.4:-6191676 | None:intergenic |
TCAGGCAGAGAAAGGCAAGA+AGG | 0.520139 | 1.4:+6192512 | MS.gene57249:CDS |
ACAACTTCAACTACTTCTGC+TGG | 0.524955 | 1.4:+6192646 | MS.gene57249:CDS |
CAGGCAGAGAAAGGCAAGAA+GGG | 0.526577 | 1.4:+6192513 | MS.gene57249:CDS |
GAATTACCTTTGGACCCATA+GGG | 0.528192 | 1.4:-6191896 | None:intergenic |
AGGGGATGTAGCCAAACCAT+TGG | 0.539225 | 1.4:-6192551 | None:intergenic |
CAGTCACTTTGCAATGCTTG+TGG | 0.543553 | 1.4:+6192487 | MS.gene57249:intron |
CAGCGGTAACAACACCGTTA+GGG | 0.546032 | 1.4:+6191827 | MS.gene57249:CDS |
ACCATTGGCAGCTTCAGCCA+TGG | 0.551217 | 1.4:-6192536 | None:intergenic |
TTGTGGAATCAGGCAGAGAA+AGG | 0.551715 | 1.4:+6192504 | MS.gene57249:CDS |
GTACATCCCATACCCCACTT+TGG | 0.556830 | 1.4:+6191865 | MS.gene57249:CDS |
TGTTACCGCTGTTACTACTA+GGG | 0.563428 | 1.4:-6191815 | None:intergenic |
TAGGGCCACTCCTCCAAAGT+GGG | 0.565226 | 1.4:-6191878 | None:intergenic |
GGACTAGTACCATAATTACT+AGG | 0.573336 | 1.4:-6191759 | None:intergenic |
AGAAGTAGTTGAAGTTGTAG+AGG | 0.579757 | 1.4:-6192641 | None:intergenic |
GAGAAAGGCAAGAAGGGCCA+TGG | 0.585866 | 1.4:+6192519 | MS.gene57249:CDS |
GAGTGGCCCTATGGGTCCAA+AGG | 0.590272 | 1.4:+6191890 | MS.gene57249:CDS |
CATCCCATACCCCACTTTGG+AGG | 0.595750 | 1.4:+6191868 | MS.gene57249:CDS |
TGATTATGATGAAGCAGCAA+CGG | 0.614524 | 1.4:+6192717 | MS.gene57249:CDS |
CATACCCCACTTTGGAGGAG+TGG | 0.615240 | 1.4:+6191873 | MS.gene57249:CDS |
GCCATGGCTGAAGCTGCCAA+TGG | 0.619219 | 1.4:+6192535 | MS.gene57249:CDS |
AACGGCGGCACGACTTCTGG+TGG | 0.640817 | 1.4:+6192735 | MS.gene57249:CDS |
ACAATCAGAACAAACCCTAA+CGG | 0.645452 | 1.4:-6191841 | None:intergenic |
ATAGGGCCACTCCTCCAAAG+TGG | 0.665162 | 1.4:-6191879 | None:intergenic |
ACAATTCAAGACTAAGAACA+AGG | 0.668290 | 1.4:+6192606 | MS.gene57249:CDS |
AGGGCCACTCCTCCAAAGTG+GGG | 0.692599 | 1.4:-6191877 | None:intergenic |
TTATGATGAAGCAGCAACGG+CGG | 0.694941 | 1.4:+6192720 | MS.gene57249:CDS |
ACAAGCCCTAGTAGTAACAG+CGG | 0.724459 | 1.4:+6191810 | MS.gene57249:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAAATTAAGTTTAATTA+TGG | - | chr1.4:6192415-6192434 | None:intergenic | 10.0% |
!! | TAATTAAAAAGATAAAATAG+AGG | - | chr1.4:6192249-6192268 | None:intergenic | 10.0% |
!! | TGATAAAATATTTGTATTAA+AGG | - | chr1.4:6192152-6192171 | None:intergenic | 10.0% |
!!! | AATATCAATATATTTTTTTG+AGG | - | chr1.4:6192051-6192070 | None:intergenic | 10.0% |
!!! | ATATCAATATATTTTTTTGA+GGG | - | chr1.4:6192050-6192069 | None:intergenic | 10.0% |
!! | ATTGATATTTATTGTTCATA+AGG | + | chr1.4:6192062-6192081 | MS.gene57249:intron | 15.0% |
!! | TTGATATTTATTGTTCATAA+GGG | + | chr1.4:6192063-6192082 | MS.gene57249:intron | 15.0% |
!!! | GATATTAATAATTTTTGTGA+TGG | - | chr1.4:6192024-6192043 | None:intergenic | 15.0% |
!!! | TATCAATATATTTTTTTGAG+GGG | - | chr1.4:6192049-6192068 | None:intergenic | 15.0% |
!!! | TGTTTTTGTAAGAATTTTTA+TGG | - | chr1.4:6192118-6192137 | None:intergenic | 15.0% |
!! | ATTTGTATTAAAGGAAGTAA+AGG | - | chr1.4:6192143-6192162 | None:intergenic | 20.0% |
!! | TCATCATAATCATAATCTAA+TGG | - | chr1.4:6192709-6192728 | None:intergenic | 20.0% |
! | TAAAAAGATAAAATAGAGGC+AGG | - | chr1.4:6192245-6192264 | None:intergenic | 25.0% |
! | TAGTTAACATGAAAACATGT+TGG | + | chr1.4:6192462-6192481 | MS.gene57249:intron | 25.0% |
!! | CGATAAACGTTAAATTTTAG+TGG | - | chr1.4:6191990-6192009 | None:intergenic | 25.0% |
!!! | ATCTTAAGCACTTTAGTTTT+AGG | - | chr1.4:6192574-6192593 | None:intergenic | 25.0% |
!!! | TACCTTATATTTTGACTTCT+TGG | - | chr1.4:6191783-6191802 | None:intergenic | 25.0% |
!!! | TCTTAAGCACTTTAGTTTTA+GGG | - | chr1.4:6192573-6192592 | None:intergenic | 25.0% |
ACAATTCAAGACTAAGAACA+AGG | + | chr1.4:6192606-6192625 | MS.gene57249:CDS | 30.0% | |
ACTATTCGTCCATATTAAAG+TGG | + | chr1.4:6191941-6191960 | MS.gene57249:intron | 30.0% | |
AGAGTTTAACGAATTACCTT+TGG | - | chr1.4:6191909-6191928 | None:intergenic | 30.0% | |
ATATGGACGAATAGTGAATA+AGG | - | chr1.4:6191936-6191955 | None:intergenic | 30.0% | |
ATGATGAGACCTAGTAATTA+TGG | + | chr1.4:6191750-6191769 | MS.gene57249:CDS | 30.0% | |
CACAAATTTATCATCATCCT+TGG | + | chr1.4:6191554-6191573 | MS.gene57249:CDS | 30.0% | |
CTATTCGTCCATATTAAAGT+GGG | + | chr1.4:6191942-6191961 | MS.gene57249:intron | 30.0% | |
GTCCAAGAAGTCAAAATATA+AGG | + | chr1.4:6191778-6191797 | MS.gene57249:CDS | 30.0% | |
TAATTACTAGGTCTCATCAT+TGG | - | chr1.4:6191750-6191769 | None:intergenic | 30.0% | |
TATGGACGAATAGTGAATAA+GGG | - | chr1.4:6191935-6191954 | None:intergenic | 30.0% | |
!! | TTCTTAGTCTTGAATTGTGT+AGG | - | chr1.4:6192604-6192623 | None:intergenic | 30.0% |
!! | TTGTTGTTTGGTCTCATTAT+TGG | - | chr1.4:6191687-6191706 | None:intergenic | 30.0% |
!!! | CTTAAGCACTTTAGTTTTAG+GGG | - | chr1.4:6192572-6192591 | None:intergenic | 30.0% |
ACAATCAGAACAAACCCTAA+CGG | - | chr1.4:6191844-6191863 | None:intergenic | 35.0% | |
AGAAGTAGTTGAAGTTGTAG+AGG | - | chr1.4:6192644-6192663 | None:intergenic | 35.0% | |
TGATTATGATGAAGCAGCAA+CGG | + | chr1.4:6192717-6192736 | MS.gene57249:CDS | 35.0% | |
! | GGACTAGTACCATAATTACT+AGG | - | chr1.4:6191762-6191781 | None:intergenic | 35.0% |
ACAACTTCAACTACTTCTGC+TGG | + | chr1.4:6192646-6192665 | MS.gene57249:CDS | 40.0% | |
AGCAGCAAAAAGATGAGTCA+CGG | + | chr1.4:6191588-6191607 | MS.gene57249:CDS | 40.0% | |
GAATTACCTTTGGACCCATA+GGG | - | chr1.4:6191899-6191918 | None:intergenic | 40.0% | |
TCCATATTAAAGTGGGAGAG+TGG | + | chr1.4:6191949-6191968 | MS.gene57249:intron | 40.0% | |
TGGTCTCATTATTGGAGTTG+TGG | - | chr1.4:6191679-6191698 | None:intergenic | 40.0% | |
TGTTACCGCTGTTACTACTA+GGG | - | chr1.4:6191818-6191837 | None:intergenic | 40.0% | |
TTGTTACCGCTGTTACTACT+AGG | - | chr1.4:6191819-6191838 | None:intergenic | 40.0% | |
TTTATCATCATCCTTGGAGC+TGG | + | chr1.4:6191560-6191579 | MS.gene57249:CDS | 40.0% | |
TTTGCAATGCTTGTGGAATC+AGG | + | chr1.4:6192494-6192513 | MS.gene57249:CDS | 40.0% | |
! | CTTCTGGTGGATATATCTTC+TGG | + | chr1.4:6192748-6192767 | MS.gene57249:CDS | 40.0% |
! | GTGGCTGCAATATTGTTGTT+TGG | - | chr1.4:6191699-6191718 | None:intergenic | 40.0% |
! | TGTTACTACTAGGGCTTGTT+TGG | - | chr1.4:6191809-6191828 | None:intergenic | 40.0% |
!! | CTTGATAGCTTTGTCAGTAG+TGG | - | chr1.4:6191718-6191737 | None:intergenic | 40.0% |
ACAAGCCCTAGTAGTAACAG+CGG | + | chr1.4:6191810-6191829 | MS.gene57249:CDS | 45.0% | |
CGAATTACCTTTGGACCCAT+AGG | - | chr1.4:6191900-6191919 | None:intergenic | 45.0% | |
GCAGCAAAAAGATGAGTCAC+GGG | + | chr1.4:6191589-6191608 | MS.gene57249:CDS | 45.0% | |
GCCACTCTCCCACTTTAATA+TGG | - | chr1.4:6191953-6191972 | None:intergenic | 45.0% | |
TTATGATGAAGCAGCAACGG+CGG | + | chr1.4:6192720-6192739 | MS.gene57249:CDS | 45.0% | |
TTGTGGAATCAGGCAGAGAA+AGG | + | chr1.4:6192504-6192523 | MS.gene57249:CDS | 45.0% | |
! | CAGTCACTTTGCAATGCTTG+TGG | + | chr1.4:6192487-6192506 | MS.gene57249:intron | 45.0% |
!!! | TAATTTTTATTATTATATCA+CGG | + | chr1.4:6192335-6192354 | MS.gene57249:intron | 5.0% |
ACAGCGGTAACAACACCGTT+AGG | + | chr1.4:6191826-6191845 | MS.gene57249:CDS | 50.0% | |
ACTCCTCCAAAGTGGGGTAT+GGG | - | chr1.4:6191874-6191893 | None:intergenic | 50.0% | |
AGGGGATGTAGCCAAACCAT+TGG | - | chr1.4:6192554-6192573 | None:intergenic | 50.0% | |
CAGCGGTAACAACACCGTTA+GGG | + | chr1.4:6191827-6191846 | MS.gene57249:CDS | 50.0% | |
CAGGCAGAGAAAGGCAAGAA+GGG | + | chr1.4:6192513-6192532 | MS.gene57249:CDS | 50.0% | |
GTACATCCCATACCCCACTT+TGG | + | chr1.4:6191865-6191884 | MS.gene57249:CDS | 50.0% | |
TCAGGCAGAGAAAGGCAAGA+AGG | + | chr1.4:6192512-6192531 | MS.gene57249:CDS | 50.0% | |
TGAGTCACGGGTCTGAGAAA+TGG | + | chr1.4:6191601-6191620 | MS.gene57249:CDS | 50.0% | |
ACCATTGGCAGCTTCAGCCA+TGG | - | chr1.4:6192539-6192558 | None:intergenic | 55.0% | |
ATAGGGCCACTCCTCCAAAG+TGG | - | chr1.4:6191882-6191901 | None:intergenic | 55.0% | |
CACTCCTCCAAAGTGGGGTA+TGG | - | chr1.4:6191875-6191894 | None:intergenic | 55.0% | |
CATCCCATACCCCACTTTGG+AGG | + | chr1.4:6191868-6191887 | MS.gene57249:CDS | 55.0% | |
GAGAAAGGCAAGAAGGGCCA+TGG | + | chr1.4:6192519-6192538 | MS.gene57249:CDS | 55.0% | |
GCTGCTATCTTCCAGCTCCA+AGG | - | chr1.4:6191574-6191593 | None:intergenic | 55.0% | |
GGCTGAAGCTGCCAATGGTT+TGG | + | chr1.4:6192540-6192559 | MS.gene57249:CDS | 55.0% | |
TAGGGCCACTCCTCCAAAGT+GGG | - | chr1.4:6191881-6191900 | None:intergenic | 55.0% | |
! | ACTTTGGAGGAGTGGCCCTA+TGG | + | chr1.4:6191881-6191900 | MS.gene57249:CDS | 55.0% |
! | CATACCCCACTTTGGAGGAG+TGG | + | chr1.4:6191873-6191892 | MS.gene57249:CDS | 55.0% |
! | CTTTGGAGGAGTGGCCCTAT+GGG | + | chr1.4:6191882-6191901 | MS.gene57249:CDS | 55.0% |
AGGGCCACTCCTCCAAAGTG+GGG | - | chr1.4:6191880-6191899 | None:intergenic | 60.0% | |
GAGTGGCCCTATGGGTCCAA+AGG | + | chr1.4:6191890-6191909 | MS.gene57249:CDS | 60.0% | |
GCCATGGCTGAAGCTGCCAA+TGG | + | chr1.4:6192535-6192554 | MS.gene57249:CDS | 60.0% | |
AACGGCGGCACGACTTCTGG+TGG | + | chr1.4:6192735-6192754 | MS.gene57249:CDS | 65.0% | |
AGCAACGGCGGCACGACTTC+TGG | + | chr1.4:6192732-6192751 | MS.gene57249:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 6191528 | 6192783 | 6191528 | ID=MS.gene57249 |
chr1.4 | mRNA | 6191528 | 6192783 | 6191528 | ID=MS.gene57249.t1;Parent=MS.gene57249 |
chr1.4 | exon | 6191528 | 6191911 | 6191528 | ID=MS.gene57249.t1.exon1;Parent=MS.gene57249.t1 |
chr1.4 | CDS | 6191528 | 6191911 | 6191528 | ID=cds.MS.gene57249.t1;Parent=MS.gene57249.t1 |
chr1.4 | exon | 6192490 | 6192783 | 6192490 | ID=MS.gene57249.t1.exon2;Parent=MS.gene57249.t1 |
chr1.4 | CDS | 6192490 | 6192783 | 6192490 | ID=cds.MS.gene57249.t1;Parent=MS.gene57249.t1 |
Gene Sequence |
Protein sequence |