Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391370 | XP_013470516.1 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 7.84e-146 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391370 | sp|Q9ASS6|PNSL5_ARATH | 78.977 | 176 | 37 | 0 | 51 | 226 | 82 | 257 | 4.45e-106 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391370 | I3S7Z5 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 3.74e-146 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1391370 | 0.822225 | 2.654845e-53 | -8.615850e-47 |
| Msa0005710 | Msa1391370 | 0.807753 | 4.332728e-50 | -8.615850e-47 |
| Msa0007450 | Msa1391370 | 0.808499 | 3.006110e-50 | -8.615850e-47 |
| Msa0017120 | Msa1391370 | 0.816203 | 6.240990e-52 | -8.615850e-47 |
| Msa0017940 | Msa1391370 | 0.815500 | 8.955787e-52 | -8.615850e-47 |
| Msa0018220 | Msa1391370 | 0.818188 | 2.233344e-52 | -8.615850e-47 |
| Msa0024680 | Msa1391370 | 0.849945 | 2.334198e-60 | -8.615850e-47 |
| Msa0027540 | Msa1391370 | 0.809139 | 2.192741e-50 | -8.615850e-47 |
| Msa0030310 | Msa1391370 | 0.821226 | 4.519497e-53 | -8.615850e-47 |
| Msa0032400 | Msa1391370 | 0.809069 | 2.270443e-50 | -8.615850e-47 |
| Msa0032840 | Msa1391370 | -0.804910 | 1.722103e-49 | -8.615850e-47 |
| Msa0044220 | Msa1391370 | 0.811995 | 5.296311e-51 | -8.615850e-47 |
| Msa0048020 | Msa1391370 | 0.838839 | 2.265857e-57 | -8.615850e-47 |
| Msa0050430 | Msa1391370 | 0.802363 | 5.813563e-49 | -8.615850e-47 |
| Msa0050580 | Msa1391370 | 0.818901 | 1.538558e-52 | -8.615850e-47 |
| Msa0052460 | Msa1391370 | 0.831294 | 1.811606e-55 | -8.615850e-47 |
| Msa0059960 | Msa1391370 | -0.802580 | 5.245217e-49 | -8.615850e-47 |
| Msa0060350 | Msa1391370 | 0.801474 | 8.852311e-49 | -8.615850e-47 |
| Msa0073820 | Msa1391370 | 0.811061 | 8.452505e-51 | -8.615850e-47 |
| Msa0075310 | Msa1391370 | 0.800290 | 1.544659e-48 | -8.615850e-47 |
| Msa0079040 | Msa1391370 | 0.804220 | 2.398321e-49 | -8.615850e-47 |
| Msa0089210 | Msa1391370 | 0.812920 | 3.325035e-51 | -8.615850e-47 |
| Msa0092730 | Msa1391370 | 0.801938 | 7.109790e-49 | -8.615850e-47 |
| Msa0094420 | Msa1391370 | 0.811696 | 6.154014e-51 | -8.615850e-47 |
| Msa0097050 | Msa1391370 | 0.817132 | 3.863194e-52 | -8.615850e-47 |
| Msa0103780 | Msa1391370 | 0.806809 | 6.868630e-50 | -8.615850e-47 |
| Msa0105210 | Msa1391370 | 0.801454 | 8.936965e-49 | -8.615850e-47 |
| Msa0120330 | Msa1391370 | 0.826231 | 3.038350e-54 | -8.615850e-47 |
| Msa1350670 | Msa1391370 | 0.850973 | 1.200508e-60 | -8.615850e-47 |
| Msa1352290 | Msa1391370 | 0.805291 | 1.433033e-49 | -8.615850e-47 |
| Msa1354040 | Msa1391370 | 0.821410 | 4.097638e-53 | -8.615850e-47 |
| Msa1355400 | Msa1391370 | 0.818821 | 1.604463e-52 | -8.615850e-47 |
| Msa1367940 | Msa1391370 | 0.807552 | 4.781608e-50 | -8.615850e-47 |
| Msa1376640 | Msa1391370 | 0.807963 | 3.909583e-50 | -8.615850e-47 |
| Msa1379980 | Msa1391370 | 0.838346 | 3.037897e-57 | -8.615850e-47 |
| Msa1381130 | Msa1391370 | 0.806163 | 9.399349e-50 | -8.615850e-47 |
| Msa1382310 | Msa1391370 | 0.815915 | 7.238837e-52 | -8.615850e-47 |
| Msa1382720 | Msa1391370 | 0.835598 | 1.528998e-56 | -8.615850e-47 |
| Msa1385620 | Msa1391370 | 0.810156 | 1.325954e-50 | -8.615850e-47 |
| Msa1385900 | Msa1391370 | 0.821742 | 3.433894e-53 | -8.615850e-47 |
| Msa1389470 | Msa1391370 | 0.993456 | 7.291162e-200 | -8.615850e-47 |
| Msa1390310 | Msa1391370 | 0.834859 | 2.349062e-56 | -8.615850e-47 |
| Msa1391370 | Msa1405770 | 0.803074 | 4.147257e-49 | -8.615850e-47 |
| Msa1391370 | Msa1406550 | 0.814010 | 1.915501e-51 | -8.615850e-47 |
| Msa1391370 | Msa1407710 | 0.812217 | 4.738489e-51 | -8.615850e-47 |
| Msa1391370 | Msa1410170 | 0.802551 | 5.317932e-49 | -8.615850e-47 |
| Msa1391370 | Msa1420060 | 0.803146 | 4.007083e-49 | -8.615850e-47 |
| Msa1391370 | Msa1421810 | 0.803370 | 3.600293e-49 | -8.615850e-47 |
| Msa1391370 | Msa1431000 | 0.800773 | 1.231441e-48 | -8.615850e-47 |
| Msa1391370 | Msa1435040 | 0.800825 | 1.201657e-48 | -8.615850e-47 |
| Msa1391370 | Msa1435050 | 0.836427 | 9.420784e-57 | -8.615850e-47 |
| Msa1391370 | Msa1439670 | 0.822814 | 1.936829e-53 | -8.615850e-47 |
| Msa1391370 | Msa1439680 | 0.811269 | 7.619232e-51 | -8.615850e-47 |
| Msa1391370 | Msa1442300 | 0.831736 | 1.409630e-55 | -8.615850e-47 |
| Msa1391370 | Msa1444450 | 0.804765 | 1.846503e-49 | -8.615850e-47 |
| Msa1391370 | Msa1447230 | 0.837435 | 5.208278e-57 | -8.615850e-47 |
| Msa1391370 | Msa1462500 | 0.812579 | 3.950030e-51 | -8.615850e-47 |
| Msa1391370 | Msa1462510 | 0.981471 | 1.138171e-152 | -8.615850e-47 |
| Msa0607480 | Msa1391370 | 0.831644 | 1.485240e-55 | -8.615850e-47 |
| Msa0614230 | Msa1391370 | 0.803012 | 4.270226e-49 | -8.615850e-47 |
| Msa0619330 | Msa1391370 | 0.824184 | 9.261645e-54 | -8.615850e-47 |
| Msa0629290 | Msa1391370 | 0.825101 | 5.632976e-54 | -8.615850e-47 |
| Msa0634270 | Msa1391370 | 0.808939 | 2.420251e-50 | -8.615850e-47 |
| Msa0640880 | Msa1391370 | 0.824839 | 6.494515e-54 | -8.615850e-47 |
| Msa0642650 | Msa1391370 | 0.857615 | 1.446692e-62 | -8.615850e-47 |
| Msa0642910 | Msa1391370 | 0.809205 | 2.123018e-50 | -8.615850e-47 |
| Msa0647750 | Msa1391370 | 0.804386 | 2.214371e-49 | -8.615850e-47 |
| Msa0659040 | Msa1391370 | 0.804659 | 1.942918e-49 | -8.615850e-47 |
| Msa0678890 | Msa1391370 | 0.824378 | 8.337068e-54 | -8.615850e-47 |
| Msa0681890 | Msa1391370 | 0.839382 | 1.638698e-57 | -8.615850e-47 |
| Msa0682400 | Msa1391370 | 0.823432 | 1.389568e-53 | -8.615850e-47 |
| Msa0690170 | Msa1391370 | 0.817471 | 3.242037e-52 | -8.615850e-47 |
| Msa0691160 | Msa1391370 | 0.804155 | 2.473835e-49 | -8.615850e-47 |
| Msa0703720 | Msa1391370 | 0.841617 | 4.262752e-58 | -8.615850e-47 |
| Msa0703760 | Msa1391370 | 0.840755 | 7.182363e-58 | -8.615850e-47 |
| Msa0707780 | Msa1391370 | 0.812682 | 3.748916e-51 | -8.615850e-47 |
| Msa0709480 | Msa1391370 | 0.835337 | 1.779868e-56 | -8.615850e-47 |
| Msa0717090 | Msa1391370 | 0.810931 | 9.018098e-51 | -8.615850e-47 |
| Msa0722940 | Msa1391370 | 0.816388 | 5.673667e-52 | -8.615850e-47 |
| Msa0723150 | Msa1391370 | 0.815757 | 7.847875e-52 | -8.615850e-47 |
| Msa0730180 | Msa1391370 | 0.824718 | 6.933696e-54 | -8.615850e-47 |
| Msa0770430 | Msa1391370 | 0.811925 | 5.485428e-51 | -8.615850e-47 |
| Msa0790830 | Msa1391370 | 0.807393 | 5.166253e-50 | -8.615850e-47 |
| Msa0797220 | Msa1391370 | 0.809197 | 2.130885e-50 | -8.615850e-47 |
| Msa0799210 | Msa1391370 | 0.803468 | 3.436376e-49 | -8.615850e-47 |
| Msa0802500 | Msa1391370 | 0.800883 | 1.169526e-48 | -8.615850e-47 |
| Msa0803130 | Msa1391370 | 0.824377 | 8.340662e-54 | -8.615850e-47 |
| Msa0841490 | Msa1391370 | 0.822229 | 2.648235e-53 | -8.615850e-47 |
| Msa0139900 | Msa1391370 | 0.825182 | 5.389955e-54 | -8.615850e-47 |
| Msa0141430 | Msa1391370 | 0.838615 | 2.589056e-57 | -8.615850e-47 |
| Msa0141670 | Msa1391370 | 0.801779 | 7.663301e-49 | -8.615850e-47 |
| Msa0141830 | Msa1391370 | 0.824913 | 6.238692e-54 | -8.615850e-47 |
| Msa0143970 | Msa1391370 | 0.812209 | 4.755964e-51 | -8.615850e-47 |
| Msa0146470 | Msa1391370 | 0.815049 | 1.128223e-51 | -8.615850e-47 |
| Msa0148780 | Msa1391370 | 0.801209 | 1.002807e-48 | -8.615850e-47 |
| Msa0157020 | Msa1391370 | 0.826717 | 2.327722e-54 | -8.615850e-47 |
| Msa0162030 | Msa1391370 | 0.805064 | 1.598832e-49 | -8.615850e-47 |
| Msa0162050 | Msa1391370 | 0.806559 | 7.755479e-50 | -8.615850e-47 |
| Msa0163550 | Msa1391370 | 0.808898 | 2.470344e-50 | -8.615850e-47 |
| Msa0168100 | Msa1391370 | 0.807040 | 6.137012e-50 | -8.615850e-47 |
| Msa0171780 | Msa1391370 | 0.810921 | 9.063561e-51 | -8.615850e-47 |
| Msa0171930 | Msa1391370 | 0.801252 | 9.828741e-49 | -8.615850e-47 |
| Msa0172350 | Msa1391370 | 0.824374 | 8.354373e-54 | -8.615850e-47 |
| Msa0172960 | Msa1391370 | -0.820370 | 7.108940e-53 | -8.615850e-47 |
| Msa0183610 | Msa1391370 | 0.801446 | 8.968916e-49 | -8.615850e-47 |
| Msa0183620 | Msa1391370 | 0.805924 | 1.055133e-49 | -8.615850e-47 |
| Msa0185390 | Msa1391370 | 0.803011 | 4.273020e-49 | -8.615850e-47 |
| Msa0185700 | Msa1391370 | 0.806565 | 7.733943e-50 | -8.615850e-47 |
| Msa0199710 | Msa1391370 | 0.808523 | 2.970907e-50 | -8.615850e-47 |
| Msa0200970 | Msa1391370 | 0.801729 | 7.848494e-49 | -8.615850e-47 |
| Msa0207000 | Msa1391370 | 0.820297 | 7.388746e-53 | -8.615850e-47 |
| Msa0207180 | Msa1391370 | 0.801135 | 1.038666e-48 | -8.615850e-47 |
| Msa0227500 | Msa1391370 | 0.803277 | 3.763609e-49 | -8.615850e-47 |
| Msa0230550 | Msa1391370 | -0.807621 | 4.621177e-50 | -8.615850e-47 |
| Msa1224670 | Msa1391370 | 0.846760 | 1.773605e-59 | -8.615850e-47 |
| Msa1234960 | Msa1391370 | 0.808615 | 2.839098e-50 | -8.615850e-47 |
| Msa1235890 | Msa1391370 | 0.811426 | 7.043386e-51 | -8.615850e-47 |
| Msa1237030 | Msa1391370 | 0.816155 | 6.399162e-52 | -8.615850e-47 |
| Msa1250670 | Msa1391370 | 0.817355 | 3.441927e-52 | -8.615850e-47 |
| Msa1263030 | Msa1391370 | 0.842876 | 1.978787e-58 | -8.615850e-47 |
| Msa1265960 | Msa1391370 | 0.801607 | 8.312130e-49 | -8.615850e-47 |
| Msa1271510 | Msa1391370 | 0.830302 | 3.169630e-55 | -8.615850e-47 |
| Msa1271600 | Msa1391370 | 0.822650 | 2.115028e-53 | -8.615850e-47 |
| Msa1280120 | Msa1391370 | 0.804142 | 2.489868e-49 | -8.615850e-47 |
| Msa1302150 | Msa1391370 | 0.807648 | 4.561361e-50 | -8.615850e-47 |
| Msa1306770 | Msa1391370 | 0.803694 | 3.084177e-49 | -8.615850e-47 |
| Msa1307370 | Msa1391370 | 0.829979 | 3.801689e-55 | -8.615850e-47 |
| Msa1309100 | Msa1391370 | 0.806426 | 8.273845e-50 | -8.615850e-47 |
| Msa1309360 | Msa1391370 | 0.808264 | 3.373489e-50 | -8.615850e-47 |
| Msa1315980 | Msa1391370 | 0.810747 | 9.882143e-51 | -8.615850e-47 |
| Msa1323060 | Msa1391370 | 0.805420 | 1.346722e-49 | -8.615850e-47 |
| Msa1325980 | Msa1391370 | 0.806021 | 1.006718e-49 | -8.615850e-47 |
| Msa0370600 | Msa1391370 | 0.820017 | 8.566852e-53 | -8.615850e-47 |
| Msa0374070 | Msa1391370 | 0.808354 | 3.227588e-50 | -8.615850e-47 |
| Msa0378340 | Msa1391370 | 0.832989 | 6.898438e-56 | -8.615850e-47 |
| Msa0382290 | Msa1391370 | 0.808199 | 3.482839e-50 | -8.615850e-47 |
| Msa0382560 | Msa1391370 | 0.804926 | 1.708155e-49 | -8.615850e-47 |
| Msa0417630 | Msa1391370 | 0.838927 | 2.149976e-57 | -8.615850e-47 |
| Msa0418200 | Msa1391370 | 0.820741 | 5.843517e-53 | -8.615850e-47 |
| Msa0423250 | Msa1391370 | 0.809526 | 1.811207e-50 | -8.615850e-47 |
| Msa0423360 | Msa1391370 | -0.806335 | 8.645527e-50 | -8.615850e-47 |
| Msa0427520 | Msa1391370 | -0.804236 | 2.379576e-49 | -8.615850e-47 |
| Msa0427690 | Msa1391370 | 0.836751 | 7.786822e-57 | -8.615850e-47 |
| Msa0429520 | Msa1391370 | -0.812144 | 4.915190e-51 | -8.615850e-47 |
| Msa0429530 | Msa1391370 | -0.807947 | 3.941100e-50 | -8.615850e-47 |
| Msa0436450 | Msa1391370 | 0.844130 | 9.148134e-59 | -8.615850e-47 |
| Msa0440480 | Msa1391370 | 0.868163 | 8.007606e-66 | -8.615850e-47 |
| Msa0442880 | Msa1391370 | 0.802750 | 4.837386e-49 | -8.615850e-47 |
| Msa0461640 | Msa1391370 | 0.803501 | 3.382240e-49 | -8.615850e-47 |
| Msa0464540 | Msa1391370 | 0.801421 | 9.074371e-49 | -8.615850e-47 |
| Msa0465860 | Msa1391370 | 0.814386 | 1.581723e-51 | -8.615850e-47 |
| Msa0990520 | Msa1391370 | 0.828968 | 6.692984e-55 | -8.615850e-47 |
| Msa0996080 | Msa1391370 | 0.823707 | 1.197924e-53 | -8.615850e-47 |
| Msa0996090 | Msa1391370 | 0.806796 | 6.913201e-50 | -8.615850e-47 |
| Msa1002040 | Msa1391370 | 0.823193 | 1.580142e-53 | -8.615850e-47 |
| Msa1004500 | Msa1391370 | 0.800406 | 1.463235e-48 | -8.615850e-47 |
| Msa1014270 | Msa1391370 | 0.810058 | 1.391980e-50 | -8.615850e-47 |
| Msa1022310 | Msa1391370 | 0.820774 | 5.741601e-53 | -8.615850e-47 |
| Msa1027150 | Msa1391370 | 0.820868 | 5.463194e-53 | -8.615850e-47 |
| Msa1027790 | Msa1391370 | 0.814818 | 1.269224e-51 | -8.615850e-47 |
| Msa1044340 | Msa1391370 | 0.833574 | 4.930920e-56 | -8.615850e-47 |
| Msa1046870 | Msa1391370 | 0.814005 | 1.919803e-51 | -8.615850e-47 |
| Msa1054720 | Msa1391370 | 0.813499 | 2.482157e-51 | -8.615850e-47 |
| Msa1055260 | Msa1391370 | 0.809146 | 2.185906e-50 | -8.615850e-47 |
| Msa1055280 | Msa1391370 | 0.820546 | 6.478629e-53 | -8.615850e-47 |
| Msa1061180 | Msa1391370 | 0.835287 | 1.832261e-56 | -8.615850e-47 |
| Msa1072080 | Msa1391370 | 0.820025 | 8.529866e-53 | -8.615850e-47 |
| Msa1084490 | Msa1391370 | 0.807130 | 5.875018e-50 | -8.615850e-47 |
| Msa1103670 | Msa1391370 | 0.817877 | 2.625889e-52 | -8.615850e-47 |
| Msa1106560 | Msa1391370 | 0.836999 | 6.730479e-57 | -8.615850e-47 |
| Msa0239660 | Msa1391370 | 0.840172 | 1.020440e-57 | -8.615850e-47 |
| Msa0247310 | Msa1391370 | 0.819311 | 1.241674e-52 | -8.615850e-47 |
| Msa0255990 | Msa1391370 | 0.800444 | 1.437182e-48 | -8.615850e-47 |
| Msa0257130 | Msa1391370 | 0.827324 | 1.666398e-54 | -8.615850e-47 |
| Msa0259560 | Msa1391370 | 0.804163 | 2.464453e-49 | -8.615850e-47 |
| Msa0264350 | Msa1391370 | 0.815162 | 1.064702e-51 | -8.615850e-47 |
| Msa0267760 | Msa1391370 | 0.835625 | 1.504484e-56 | -8.615850e-47 |
| Msa0274780 | Msa1391370 | 0.805875 | 1.080952e-49 | -8.615850e-47 |
| Msa0277640 | Msa1391370 | 0.830035 | 3.683228e-55 | -8.615850e-47 |
| Msa0278620 | Msa1391370 | 0.800166 | 1.636959e-48 | -8.615850e-47 |
| Msa0288380 | Msa1391370 | 0.810507 | 1.113559e-50 | -8.615850e-47 |
| Msa0296760 | Msa1391370 | 0.800328 | 1.517409e-48 | -8.615850e-47 |
| Msa0298970 | Msa1391370 | 0.816161 | 6.379283e-52 | -8.615850e-47 |
| Msa0315480 | Msa1391370 | 0.820551 | 6.459729e-53 | -8.615850e-47 |
| Msa0317260 | Msa1391370 | 0.804250 | 2.363582e-49 | -8.615850e-47 |
| Msa0318000 | Msa1391370 | 0.815894 | 7.315054e-52 | -8.615850e-47 |
| Msa0339860 | Msa1391370 | 0.811543 | 6.642488e-51 | -8.615850e-47 |
| Msa0344580 | Msa1391370 | 0.800956 | 1.129724e-48 | -8.615850e-47 |
| Msa0358230 | Msa1391370 | 0.811236 | 7.744039e-51 | -8.615850e-47 |
| Msa1112610 | Msa1391370 | 0.822192 | 2.701729e-53 | -8.615850e-47 |
| Msa1125780 | Msa1391370 | 0.830079 | 3.593063e-55 | -8.615850e-47 |
| Msa1125950 | Msa1391370 | 0.835517 | 1.602578e-56 | -8.615850e-47 |
| Msa1129560 | Msa1391370 | 0.839679 | 1.371676e-57 | -8.615850e-47 |
| Msa1129720 | Msa1391370 | 0.834468 | 2.945166e-56 | -8.615850e-47 |
| Msa1147270 | Msa1391370 | 0.827738 | 1.325511e-54 | -8.615850e-47 |
| Msa1149760 | Msa1391370 | 0.845499 | 3.910345e-59 | -8.615850e-47 |
| Msa1154670 | Msa1391370 | 0.806910 | 6.539997e-50 | -8.615850e-47 |
| Msa1157160 | Msa1391370 | 0.826190 | 3.108271e-54 | -8.615850e-47 |
| Msa1159100 | Msa1391370 | 0.837016 | 6.666145e-57 | -8.615850e-47 |
| Msa1166180 | Msa1391370 | 0.824485 | 7.867071e-54 | -8.615850e-47 |
| Msa1166280 | Msa1391370 | 0.817270 | 3.597528e-52 | -8.615850e-47 |
| Msa1171340 | Msa1391370 | 0.829009 | 6.541723e-55 | -8.615850e-47 |
| Msa1175750 | Msa1391370 | 0.837854 | 4.064136e-57 | -8.615850e-47 |
| Msa1183390 | Msa1391370 | 0.820901 | 5.369983e-53 | -8.615850e-47 |
| Msa1190910 | Msa1391370 | 0.840254 | 9.711482e-58 | -8.615850e-47 |
| Msa1197110 | Msa1391370 | 0.846345 | 2.303132e-59 | -8.615850e-47 |
| Msa1200920 | Msa1391370 | 0.833251 | 5.937832e-56 | -8.615850e-47 |
| Msa1220450 | Msa1391370 | -0.816197 | 6.260380e-52 | -8.615850e-47 |
| Msa1220460 | Msa1391370 | -0.812632 | 3.845629e-51 | -8.615850e-47 |
| Msa1220480 | Msa1391370 | -0.811466 | 6.905259e-51 | -8.615850e-47 |
| Msa1221260 | Msa1391370 | 0.802633 | 5.113151e-49 | -8.615850e-47 |
| Msa1222360 | Msa1391370 | 0.808006 | 3.827772e-50 | -8.615850e-47 |
| Msa1222390 | Msa1391370 | 0.827166 | 1.818025e-54 | -8.615850e-47 |
| Msa1223840 | Msa1391370 | 0.846074 | 2.728385e-59 | -8.615850e-47 |
| Msa0490300 | Msa1391370 | 0.804631 | 1.968900e-49 | -8.615850e-47 |
| Msa0510230 | Msa1391370 | 0.810499 | 1.118143e-50 | -8.615850e-47 |
| Msa0518520 | Msa1391370 | 0.836681 | 8.116353e-57 | -8.615850e-47 |
| Msa0519200 | Msa1391370 | 0.813631 | 2.321546e-51 | -8.615850e-47 |
| Msa0524120 | Msa1391370 | 0.804146 | 2.485385e-49 | -8.615850e-47 |
| Msa0526700 | Msa1391370 | 0.839719 | 1.339131e-57 | -8.615850e-47 |
| Msa0526710 | Msa1391370 | 0.819410 | 1.178876e-52 | -8.615850e-47 |
| Msa0527590 | Msa1391370 | 0.811178 | 7.970731e-51 | -8.615850e-47 |
| Msa0527600 | Msa1391370 | 0.814036 | 1.889835e-51 | -8.615850e-47 |
| Msa0538570 | Msa1391370 | 0.835484 | 1.633629e-56 | -8.615850e-47 |
| Msa0546380 | Msa1391370 | 0.843233 | 1.588988e-58 | -8.615850e-47 |
| Msa0546740 | Msa1391370 | 0.823740 | 1.177032e-53 | -8.615850e-47 |
| Msa0547050 | Msa1391370 | 0.830549 | 2.758034e-55 | -8.615850e-47 |
| Msa0561510 | Msa1391370 | 0.812969 | 3.244063e-51 | -8.615850e-47 |
| Msa0563530 | Msa1391370 | 0.846961 | 1.563003e-59 | -8.615850e-47 |
| Msa0575250 | Msa1391370 | 0.802113 | 6.544382e-49 | -8.615850e-47 |
| Msa0576420 | Msa1391370 | 0.828528 | 8.553579e-55 | -8.615850e-47 |
| Msa0577440 | Msa1391370 | 0.815048 | 1.128873e-51 | -8.615850e-47 |
| Msa0581340 | Msa1391370 | 0.803798 | 2.935563e-49 | -8.615850e-47 |
| Msa0581460 | Msa1391370 | 0.815958 | 7.081136e-52 | -8.615850e-47 |
| Msa0594390 | Msa1391370 | 0.846916 | 1.607971e-59 | -8.615850e-47 |
| Msa0600390 | Msa1391370 | 0.833222 | 6.036357e-56 | -8.615850e-47 |
| Msa0843690 | Msa1391370 | 0.810940 | 8.978503e-51 | -8.615850e-47 |
| Msa0890250 | Msa1391370 | 0.830952 | 2.198252e-55 | -8.615850e-47 |
| Msa0907700 | Msa1391370 | 0.811484 | 6.842001e-51 | -8.615850e-47 |
| Msa0910400 | Msa1391370 | 0.812549 | 4.008544e-51 | -8.615850e-47 |
| Msa0922540 | Msa1391370 | 0.838212 | 3.287532e-57 | -8.615850e-47 |
| Msa0925160 | Msa1391370 | 0.855867 | 4.729825e-62 | -8.615850e-47 |
| Msa0925730 | Msa1391370 | 0.805194 | 1.501608e-49 | -8.615850e-47 |
| Msa0930330 | Msa1391370 | 0.809714 | 1.650564e-50 | -8.615850e-47 |
| Msa0931480 | Msa1391370 | 0.829363 | 5.366816e-55 | -8.615850e-47 |
| Msa0937550 | Msa1391370 | 0.814948 | 1.187584e-51 | -8.615850e-47 |
| Msa0937940 | Msa1391370 | 0.804388 | 2.212326e-49 | -8.615850e-47 |
| Msa0944510 | Msa1391370 | 0.819158 | 1.345084e-52 | -8.615850e-47 |
| Msa0951460 | Msa1391370 | 0.817168 | 3.792027e-52 | -8.615850e-47 |
| Msa0951960 | Msa1391370 | 0.811371 | 7.238575e-51 | -8.615850e-47 |
| Msa0955260 | Msa1391370 | 0.830108 | 3.535979e-55 | -8.615850e-47 |
| Msa0958020 | Msa1391370 | 0.824347 | 8.478629e-54 | -8.615850e-47 |
| Msa0972730 | Msa1391370 | 0.841950 | 3.482346e-58 | -8.615850e-47 |
| Msa0974750 | Msa1391370 | 0.808890 | 2.479302e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391370 | MtrunA17_Chr1g0213971 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 7.21e-150 | 416 |
| Msa1391370 | MtrunA17_Chr1g0193711 | 63.978 | 186 | 63 | 2 | 41 | 225 | 67 | 249 | 3.82e-83 | 248 |
| Msa1391370 | MtrunA17_Chr7g0270991 | 63.492 | 189 | 64 | 2 | 37 | 225 | 76 | 259 | 5.58e-83 | 248 |
| Msa1391370 | MtrunA17_Chr3g0104751 | 60.989 | 182 | 60 | 3 | 51 | 225 | 26 | 203 | 5.13e-71 | 215 |
| Msa1391370 | MtrunA17_Chr3g0145501 | 59.649 | 171 | 58 | 3 | 60 | 223 | 13 | 179 | 6.32e-66 | 202 |
| Msa1391370 | MtrunA17_Chr3g0113441 | 60.345 | 174 | 58 | 3 | 57 | 223 | 62 | 231 | 7.18e-65 | 201 |
| Msa1391370 | MtrunA17_Chr7g0274841 | 57.895 | 171 | 61 | 3 | 60 | 223 | 5 | 171 | 1.79e-64 | 197 |
| Msa1391370 | MtrunA17_Chr4g0038431 | 59.195 | 174 | 60 | 3 | 57 | 223 | 2 | 171 | 2.36e-64 | 197 |
| Msa1391370 | MtrunA17_Chr8g0374621 | 55.814 | 172 | 65 | 2 | 60 | 223 | 5 | 173 | 5.23e-58 | 187 |
| Msa1391370 | MtrunA17_Chr8g0353571 | 54.438 | 169 | 68 | 3 | 61 | 223 | 20 | 185 | 2.67e-56 | 177 |
| Msa1391370 | MtrunA17_Chr4g0037281 | 50.829 | 181 | 80 | 2 | 51 | 224 | 38 | 216 | 2.89e-56 | 178 |
| Msa1391370 | MtrunA17_Chr4g0045321 | 53.757 | 173 | 69 | 2 | 60 | 224 | 5 | 174 | 4.04e-56 | 182 |
| Msa1391370 | MtrunA17_Chr7g0260441 | 55.172 | 174 | 66 | 3 | 61 | 226 | 9 | 178 | 1.27e-53 | 182 |
| Msa1391370 | MtrunA17_Chr2g0321111 | 52.778 | 144 | 63 | 3 | 75 | 217 | 470 | 609 | 1.52e-40 | 146 |
| Msa1391370 | MtrunA17_Chr7g0266721 | 47.917 | 144 | 70 | 4 | 75 | 217 | 18 | 157 | 8.19e-37 | 127 |
| Msa1391370 | MtrunA17_Chr3g0138061 | 44.444 | 171 | 83 | 3 | 61 | 223 | 12 | 178 | 4.11e-35 | 131 |
| Msa1391370 | MtrunA17_Chr8g0351571 | 47.945 | 146 | 69 | 4 | 75 | 218 | 9 | 149 | 4.98e-34 | 119 |
| Msa1391370 | MtrunA17_Chr1g0149061 | 46.000 | 150 | 67 | 4 | 61 | 201 | 9 | 153 | 2.23e-31 | 120 |
| Msa1391370 | MtrunA17_Chr3g0122871 | 53.333 | 120 | 28 | 3 | 119 | 211 | 1 | 119 | 6.47e-31 | 110 |
| Msa1391370 | MtrunA17_Chr5g0401141 | 46.528 | 144 | 72 | 4 | 76 | 218 | 354 | 493 | 7.53e-31 | 119 |
| Msa1391370 | MtrunA17_Chr6g0484281 | 39.474 | 152 | 79 | 5 | 75 | 217 | 9 | 156 | 7.17e-20 | 87.8 |
| Msa1391370 | MtrunA17_Chr2g0288371 | 42.143 | 140 | 74 | 6 | 76 | 212 | 22 | 157 | 1.14e-19 | 87.0 |
| Msa1391370 | MtrunA17_Chr8g0357591 | 38.816 | 152 | 80 | 5 | 75 | 217 | 9 | 156 | 1.40e-18 | 84.0 |
| Msa1391370 | MtrunA17_Chr2g0305071 | 29.293 | 198 | 95 | 8 | 74 | 226 | 90 | 287 | 3.59e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391370 | AT5G13120.2 | 78.977 | 176 | 37 | 0 | 51 | 226 | 78 | 253 | 3.10e-107 | 309 |
| Msa1391370 | AT5G13120.1 | 78.977 | 176 | 37 | 0 | 51 | 226 | 82 | 257 | 4.53e-107 | 309 |
| Msa1391370 | AT3G62030.1 | 66.129 | 186 | 60 | 1 | 40 | 225 | 76 | 258 | 7.70e-86 | 255 |
| Msa1391370 | AT3G62030.2 | 66.129 | 186 | 60 | 1 | 40 | 225 | 129 | 311 | 4.20e-85 | 255 |
| Msa1391370 | AT3G62030.3 | 68.391 | 174 | 52 | 1 | 52 | 225 | 87 | 257 | 8.88e-85 | 253 |
| Msa1391370 | AT5G58710.1 | 58.201 | 189 | 68 | 3 | 44 | 225 | 20 | 204 | 1.77e-70 | 214 |
| Msa1391370 | AT2G29960.1 | 58.201 | 189 | 68 | 3 | 44 | 225 | 17 | 201 | 2.71e-70 | 214 |
| Msa1391370 | AT2G29960.3 | 58.201 | 189 | 68 | 3 | 44 | 225 | 17 | 201 | 2.71e-70 | 214 |
| Msa1391370 | AT2G21130.1 | 60.819 | 171 | 56 | 3 | 60 | 223 | 6 | 172 | 6.12e-68 | 207 |
| Msa1391370 | AT2G16600.1 | 60.234 | 171 | 57 | 3 | 60 | 223 | 6 | 172 | 7.14e-67 | 204 |
| Msa1391370 | AT4G38740.1 | 59.064 | 171 | 59 | 3 | 60 | 223 | 5 | 171 | 1.29e-65 | 201 |
| Msa1391370 | AT3G56070.1 | 57.310 | 171 | 62 | 3 | 60 | 223 | 5 | 171 | 5.60e-64 | 197 |
| Msa1391370 | AT3G56070.2 | 57.310 | 171 | 62 | 3 | 60 | 223 | 5 | 171 | 5.60e-64 | 197 |
| Msa1391370 | AT3G55920.1 | 56.044 | 182 | 67 | 4 | 52 | 225 | 52 | 228 | 1.56e-62 | 195 |
| Msa1391370 | AT2G29960.2 | 55.026 | 189 | 64 | 4 | 44 | 225 | 17 | 191 | 2.28e-62 | 193 |
| Msa1391370 | AT4G34870.1 | 58.480 | 171 | 60 | 3 | 60 | 223 | 5 | 171 | 3.24e-62 | 192 |
| Msa1391370 | AT2G15790.1 | 56.069 | 173 | 65 | 2 | 60 | 224 | 5 | 174 | 1.60e-56 | 184 |
| Msa1391370 | AT2G38730.1 | 54.438 | 169 | 68 | 3 | 61 | 223 | 34 | 199 | 3.61e-56 | 177 |
| Msa1391370 | AT2G16600.2 | 55.488 | 164 | 54 | 3 | 60 | 223 | 6 | 150 | 8.11e-56 | 175 |
| Msa1391370 | AT4G34960.1 | 49.744 | 195 | 83 | 3 | 42 | 224 | 25 | 216 | 4.60e-55 | 176 |
| Msa1391370 | AT3G63400.2 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 7.91e-54 | 177 |
| Msa1391370 | AT3G63400.3 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1391370 | AT3G63400.4 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1391370 | AT3G63400.1 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1391370 | AT3G44600.1 | 52.778 | 144 | 63 | 3 | 75 | 217 | 484 | 623 | 1.15e-40 | 147 |
| Msa1391370 | AT4G34960.2 | 50.667 | 150 | 59 | 3 | 42 | 179 | 25 | 171 | 2.37e-40 | 136 |
| Msa1391370 | AT2G36130.1 | 46.528 | 144 | 72 | 4 | 75 | 217 | 18 | 157 | 1.32e-37 | 129 |
| Msa1391370 | AT1G01940.1 | 46.897 | 145 | 72 | 4 | 75 | 218 | 9 | 149 | 2.14e-35 | 123 |
| Msa1391370 | AT3G22920.1 | 44.828 | 174 | 75 | 7 | 60 | 223 | 5 | 167 | 5.51e-32 | 117 |
| Msa1391370 | AT5G67530.1 | 46.154 | 143 | 72 | 4 | 76 | 217 | 353 | 491 | 1.77e-31 | 121 |
| Msa1391370 | AT4G32420.1 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1391370 | AT4G32420.5 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1391370 | AT4G32420.3 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1391370 | AT4G32420.6 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1391370 | AT4G32420.4 | 41.935 | 155 | 77 | 3 | 56 | 201 | 4 | 154 | 3.59e-26 | 106 |
| Msa1391370 | AT1G53720.2 | 39.474 | 152 | 79 | 5 | 75 | 217 | 9 | 156 | 1.03e-22 | 94.7 |
| Msa1391370 | AT4G33060.1 | 43.262 | 141 | 71 | 7 | 76 | 212 | 22 | 157 | 3.48e-22 | 94.7 |
| Msa1391370 | AT1G53720.1 | 40.132 | 152 | 78 | 5 | 75 | 217 | 9 | 156 | 7.59e-22 | 93.6 |
| Msa1391370 | AT2G47320.1 | 32.653 | 147 | 82 | 6 | 76 | 217 | 87 | 221 | 7.87e-11 | 60.5 |
Find 82 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGATTGTCACCTTCTTT+AGG | 0.241303 | tig0021430:-55432 | None:intergenic |
| GATCAGAGGCATGTTGTATT+TGG | 0.249985 | tig0021430:+55340 | Msa1391370:CDS |
| ACTGATTGTCACCTTCTTTA+GGG | 0.273487 | tig0021430:-55431 | None:intergenic |
| TGGAAGGCATGGACATTGTT+AGG | 0.314434 | tig0021430:+55371 | Msa1391370:CDS |
| TAGGTCCTAGTATGAAAATA+AGG | 0.319359 | tig0021430:-55590 | None:intergenic |
| CAAGGAGGAGACTTTGATAA+AGG | 0.345816 | tig0021430:+54817 | Msa1391370:CDS |
| TGTTGTATTTGGCCAAGTTT+TGG | 0.352436 | tig0021430:+55351 | Msa1391370:CDS |
| AATAGTTGGTAAAAGTTTGT+AGG | 0.370817 | tig0021430:-55609 | None:intergenic |
| TCCACCAGTGAGAAGGGCTT+TGG | 0.372862 | tig0021430:+54748 | Msa1391370:CDS |
| CCAACTATTTGTATTCTAGT+AGG | 0.384001 | tig0021430:+55623 | Msa1391370:three_prime_UTR |
| ATCTATCTATCGCAGGGAAC+TGG | 0.385423 | tig0021430:+54909 | Msa1391370:intron |
| AACAAAACATGTCAAGCAAT+TGG | 0.393584 | tig0021430:-55469 | None:intergenic |
| CTTCCAACCAGCTTCCCAAC+TGG | 0.403156 | tig0021430:-54664 | None:intergenic |
| AGTAGGAATTAGTATCGTAT+TGG | 0.409412 | tig0021430:+55640 | Msa1391370:three_prime_UTR |
| GCATCTCCGTCGGGGTGGTT+AGG | 0.409454 | tig0021430:+54494 | Msa1391370:CDS |
| GGAAGTTCTCAACAGTTTGC+GGG | 0.417261 | tig0021430:-54717 | None:intergenic |
| TTCTTTGTTTCTTGCTGCTG+AGG | 0.427286 | tig0021430:+55504 | Msa1391370:three_prime_UTR |
| AAAGTGAGGGCTGTGGAAAA+TGG | 0.427415 | tig0021430:+54565 | Msa1391370:CDS |
| GTATTCTTTGATGTTAGTAT+TGG | 0.430298 | tig0021430:+54637 | Msa1391370:CDS |
| AACTGACTCCCATTGGTGTT+GGG | 0.430322 | tig0021430:-55202 | None:intergenic |
| GGTGGTTAGGTCCCGAGGTG+TGG | 0.434983 | tig0021430:+54507 | Msa1391370:CDS |
| AGGATTGTGATAGGACTCTT+TGG | 0.436041 | tig0021430:+54685 | Msa1391370:CDS |
| GCCCTTCTCACTGGTGGAAA+GGG | 0.436297 | tig0021430:-54743 | None:intergenic |
| GTAGGAATTAGTATCGTATT+GGG | 0.442760 | tig0021430:+55641 | Msa1391370:three_prime_UTR |
| GTGGTTAGGTCCCGAGGTGT+GGG | 0.453738 | tig0021430:+54508 | Msa1391370:CDS |
| TGGAAATCCAGTTGGGAAGC+TGG | 0.456366 | tig0021430:+54657 | Msa1391370:CDS |
| TGCCCTTTCCACCAGTGAGA+AGG | 0.468665 | tig0021430:+54741 | Msa1391370:CDS |
| CTAAAAGAAGCATCTCCGTC+GGG | 0.471283 | tig0021430:+54485 | Msa1391370:CDS |
| TGTCCATGCCTTCCAAAACT+TGG | 0.486542 | tig0021430:-55363 | None:intergenic |
| ACTGGAGGCAAAAGTATCTC+TGG | 0.489609 | tig0021430:+54927 | Msa1391370:CDS |
| AGCCCTTCTCACTGGTGGAA+AGG | 0.493291 | tig0021430:-54744 | None:intergenic |
| ATCAAGGACTTCATGATTCA+AGG | 0.494593 | tig0021430:+54799 | Msa1391370:CDS |
| ACATTGGCAGACGCTGTGGC+TGG | 0.505086 | tig0021430:+55318 | Msa1391370:intron |
| GCCCTTTCCACCAGTGAGAA+GGG | 0.506529 | tig0021430:+54742 | Msa1391370:CDS |
| CATGCTAACAGCTCCTGGTC+CGG | 0.506814 | tig0021430:-55167 | None:intergenic |
| ATGCTGGTCCCAACACCAAT+GGG | 0.515041 | tig0021430:+55194 | Msa1391370:CDS |
| CACCTTCCATCGCGTCATCA+AGG | 0.515078 | tig0021430:+54783 | Msa1391370:CDS |
| GTTAGTATTGGAAATCCAGT+TGG | 0.515418 | tig0021430:+54649 | Msa1391370:CDS |
| CCAGTGTCTCATACCGGACC+AGG | 0.515423 | tig0021430:+55154 | Msa1391370:intron |
| TGTTAGGTCGATTGAATCAC+GGG | 0.517014 | tig0021430:+55387 | Msa1391370:CDS |
| AGGTCCTAGTATGAAAATAA+GGG | 0.519396 | tig0021430:-55589 | None:intergenic |
| CCTACTAGAATACAAATAGT+TGG | 0.525592 | tig0021430:-55623 | None:intergenic |
| CTGATTGTCACCTTCTTTAG+GGG | 0.526723 | tig0021430:-55430 | None:intergenic |
| CGGAAGTTCTCAACAGTTTG+CGG | 0.530427 | tig0021430:-54718 | None:intergenic |
| TTTGCCATGCTAACAGCTCC+TGG | 0.534982 | tig0021430:-55172 | None:intergenic |
| GCTGTTAGCATGGCAAATGC+TGG | 0.538859 | tig0021430:+55178 | Msa1391370:CDS |
| TAGTTTCACACCCACACCTC+GGG | 0.541866 | tig0021430:-54518 | None:intergenic |
| AATGCTGGTCCCAACACCAA+TGG | 0.549301 | tig0021430:+55193 | Msa1391370:CDS |
| GCCAAAGCCCTTCTCACTGG+TGG | 0.549951 | tig0021430:-54749 | None:intergenic |
| GTAGCCAAAGCCCTTCTCAC+TGG | 0.550204 | tig0021430:-54752 | None:intergenic |
| CAGTTGGGAAGCTGGTTGGA+AGG | 0.554098 | tig0021430:+54665 | Msa1391370:CDS |
| TTAGTATTGGAAATCCAGTT+GGG | 0.555401 | tig0021430:+54650 | Msa1391370:CDS |
| CTTGATGACGCGATGGAAGG+TGG | 0.555450 | tig0021430:-54782 | None:intergenic |
| CTGGTTGGAAGGATTGTGAT+AGG | 0.560590 | tig0021430:+54676 | Msa1391370:CDS |
| AAACTGACTCCCATTGGTGT+TGG | 0.561474 | tig0021430:-55203 | None:intergenic |
| TGGTGATCGTCCCCTAAAGA+AGG | 0.561937 | tig0021430:+55420 | Msa1391370:CDS |
| AATCCAGTTGGGAAGCTGGT+TGG | 0.562899 | tig0021430:+54661 | Msa1391370:CDS |
| AGACGCTGTGGCTGGATCAG+AGG | 0.565181 | tig0021430:+55326 | Msa1391370:intron |
| GTCGGGGTGGTTAGGTCCCG+AGG | 0.565995 | tig0021430:+54502 | Msa1391370:CDS |
| TTGTTAGGTCGATTGAATCA+CGG | 0.592054 | tig0021430:+55386 | Msa1391370:CDS |
| TCTCACTGGTGGAAAGGGCA+CGG | 0.601235 | tig0021430:-54738 | None:intergenic |
| CGGACCAGGAGCTGTTAGCA+TGG | 0.603520 | tig0021430:+55168 | Msa1391370:CDS |
| CCTAAAAGAAGCATCTCCGT+CGG | 0.606730 | tig0021430:+54484 | Msa1391370:CDS |
| ACAAGTGAAAGTGAGGGCTG+TGG | 0.614839 | tig0021430:+54558 | Msa1391370:CDS |
| CATGACATTGGCAGACGCTG+TGG | 0.616067 | tig0021430:+55314 | Msa1391370:intron |
| CTAGTTTCACACCCACACCT+CGG | 0.617486 | tig0021430:-54519 | None:intergenic |
| TACGACGACAAGTGAAAGTG+AGG | 0.618754 | tig0021430:+54551 | Msa1391370:CDS |
| GTCCTTGATGACGCGATGGA+AGG | 0.624852 | tig0021430:-54785 | None:intergenic |
| TGAAGTCCTTGATGACGCGA+TGG | 0.626809 | tig0021430:-54789 | None:intergenic |
| ATATCTCCAGTGTCTCATAC+CGG | 0.627003 | tig0021430:+55148 | Msa1391370:intron |
| GATGACGCGATGGAAGGTGG+AGG | 0.631465 | tig0021430:-54779 | None:intergenic |
| GTGGGTGTGAAACTAGCAGT+AGG | 0.631670 | tig0021430:+54526 | Msa1391370:CDS |
| TATCTATCGCAGGGAACTGG+AGG | 0.635120 | tig0021430:+54912 | Msa1391370:intron |
| GGAAAATGGTAGTAGTTCAG+AGG | 0.650163 | tig0021430:+54579 | Msa1391370:CDS |
| GAATCACGGGAGACTGATCG+TGG | 0.651487 | tig0021430:+55400 | Msa1391370:CDS |
| TCGGGACCTAACCACCCCGA+CGG | 0.658560 | tig0021430:-54500 | None:intergenic |
| AAGAAGCATCTCCGTCGGGG+TGG | 0.659605 | tig0021430:+54489 | Msa1391370:CDS |
| TCCTAGTATGAAAATAAGGG+AGG | 0.672935 | tig0021430:-55586 | None:intergenic |
| AAGGTGACAATCAGTGACTG+TGG | 0.689468 | tig0021430:+55439 | Msa1391370:CDS |
| TAAAAGAAGCATCTCCGTCG+GGG | 0.693386 | tig0021430:+54486 | Msa1391370:CDS |
| ACGACGACAAGTGAAAGTGA+GGG | 0.705755 | tig0021430:+54552 | Msa1391370:CDS |
| AAGGACTTCATGATTCAAGG+AGG | 0.745105 | tig0021430:+54802 | Msa1391370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCAATTAAATTTAAGTAA+TGG | - | tig0021430:54383-54402 | None:intergenic | 15.0% |
| !!! | ATAAGTTGATGAATAAAAAA+AGG | - | tig0021430:54879-54898 | None:intergenic | 15.0% |
| !! | CATCAATTAAATTTAAGTAA+TGG | - | tig0021430:54383-54402 | None:intergenic | 15.0% |
| !!! | ATAAGTTGATGAATAAAAAA+AGG | - | tig0021430:54879-54898 | None:intergenic | 15.0% |
| !! | TATTAATTGATTGATTGTCT+TGG | + | tig0021430:54416-54435 | Msa1391370:intron | 20.0% |
| !! | AATAAAATAAACACAGTGAA+GGG | - | tig0021430:55050-55069 | None:intergenic | 20.0% |
| !! | AAATAAAATAAACACAGTGA+AGG | - | tig0021430:55051-55070 | None:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | + | tig0021430:55072-55091 | Msa1391370:intron | 20.0% |
| !! | TATTAATTGATTGATTGTCT+TGG | + | tig0021430:54416-54435 | Msa1391370:intron | 20.0% |
| !! | AATAAAATAAACACAGTGAA+GGG | - | tig0021430:55050-55069 | None:intergenic | 20.0% |
| !! | AAATAAAATAAACACAGTGA+AGG | - | tig0021430:55051-55070 | None:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | + | tig0021430:55072-55091 | Msa1391370:intron | 20.0% |
| !!! | TTGAGTTGAATAGATAGATT+AGG | + | tig0021430:54192-54211 | Msa1391370:intron | 25.0% |
| ! | TATATTATCAGTGAGAAAAG+TGG | - | tig0021430:54326-54345 | None:intergenic | 25.0% |
| ! | GTATTCTTTGATGTTAGTAT+TGG | + | tig0021430:54637-54656 | Msa1391370:CDS | 25.0% |
| !! | GTTGATGAATAAAAAAAGGA+AGG | - | tig0021430:54875-54894 | None:intergenic | 25.0% |
| ! | ATAAAATAAACACAGTGAAG+GGG | - | tig0021430:55049-55068 | None:intergenic | 25.0% |
| ! | ATTCTTCTATTCTCTCTTAT+CGG | + | tig0021430:55250-55269 | Msa1391370:intron | 25.0% |
| !!! | AATAGTTGGTAAAAGTTTGT+AGG | - | tig0021430:55612-55631 | None:intergenic | 25.0% |
| !!! | TTGAGTTGAATAGATAGATT+AGG | + | tig0021430:54192-54211 | Msa1391370:intron | 25.0% |
| ! | TATATTATCAGTGAGAAAAG+TGG | - | tig0021430:54326-54345 | None:intergenic | 25.0% |
| ! | GTATTCTTTGATGTTAGTAT+TGG | + | tig0021430:54637-54656 | Msa1391370:CDS | 25.0% |
| !! | GTTGATGAATAAAAAAAGGA+AGG | - | tig0021430:54875-54894 | None:intergenic | 25.0% |
| ! | ATAAAATAAACACAGTGAAG+GGG | - | tig0021430:55049-55068 | None:intergenic | 25.0% |
| ! | ATTCTTCTATTCTCTCTTAT+CGG | + | tig0021430:55250-55269 | Msa1391370:intron | 25.0% |
| !!! | AATAGTTGGTAAAAGTTTGT+AGG | - | tig0021430:55612-55631 | None:intergenic | 25.0% |
| AATTGATTGATTGTCTTGGT+TGG | + | tig0021430:54420-54439 | Msa1391370:intron | 30.0% | |
| ATTGATTGATTGTCTTGGTT+GGG | + | tig0021430:54421-54440 | Msa1391370:intron | 30.0% | |
| ! | TTAGTATTGGAAATCCAGTT+GGG | + | tig0021430:54650-54669 | Msa1391370:CDS | 30.0% |
| TAAAATAAACACAGTGAAGG+GGG | - | tig0021430:55048-55067 | None:intergenic | 30.0% | |
| ACTTAATTGTCTCATGACAT+TGG | + | tig0021430:55302-55321 | Msa1391370:intron | 30.0% | |
| AACAAAACATGTCAAGCAAT+TGG | - | tig0021430:55472-55491 | None:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | tig0021430:55478-55497 | Msa1391370:exon | 30.0% |
| CAAACAAAAAATTGAGAGAG+CGG | - | tig0021430:55544-55563 | None:intergenic | 30.0% | |
| AGGTCCTAGTATGAAAATAA+GGG | - | tig0021430:55592-55611 | None:intergenic | 30.0% | |
| TAGGTCCTAGTATGAAAATA+AGG | - | tig0021430:55593-55612 | None:intergenic | 30.0% | |
| CCTACTAGAATACAAATAGT+TGG | - | tig0021430:55626-55645 | None:intergenic | 30.0% | |
| CCAACTATTTGTATTCTAGT+AGG | + | tig0021430:55623-55642 | Msa1391370:three_prime_UTR | 30.0% | |
| AGTAGGAATTAGTATCGTAT+TGG | + | tig0021430:55640-55659 | Msa1391370:three_prime_UTR | 30.0% | |
| GTAGGAATTAGTATCGTATT+GGG | + | tig0021430:55641-55660 | Msa1391370:three_prime_UTR | 30.0% | |
| AATTGATTGATTGTCTTGGT+TGG | + | tig0021430:54420-54439 | Msa1391370:intron | 30.0% | |
| ATTGATTGATTGTCTTGGTT+GGG | + | tig0021430:54421-54440 | Msa1391370:intron | 30.0% | |
| ! | TTAGTATTGGAAATCCAGTT+GGG | + | tig0021430:54650-54669 | Msa1391370:CDS | 30.0% |
| TAAAATAAACACAGTGAAGG+GGG | - | tig0021430:55048-55067 | None:intergenic | 30.0% | |
| ACTTAATTGTCTCATGACAT+TGG | + | tig0021430:55302-55321 | Msa1391370:intron | 30.0% | |
| AACAAAACATGTCAAGCAAT+TGG | - | tig0021430:55472-55491 | None:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | tig0021430:55478-55497 | Msa1391370:exon | 30.0% |
| CAAACAAAAAATTGAGAGAG+CGG | - | tig0021430:55544-55563 | None:intergenic | 30.0% | |
| AGGTCCTAGTATGAAAATAA+GGG | - | tig0021430:55592-55611 | None:intergenic | 30.0% | |
| TAGGTCCTAGTATGAAAATA+AGG | - | tig0021430:55593-55612 | None:intergenic | 30.0% | |
| CCTACTAGAATACAAATAGT+TGG | - | tig0021430:55626-55645 | None:intergenic | 30.0% | |
| CCAACTATTTGTATTCTAGT+AGG | + | tig0021430:55623-55642 | Msa1391370:three_prime_UTR | 30.0% | |
| AGTAGGAATTAGTATCGTAT+TGG | + | tig0021430:55640-55659 | Msa1391370:three_prime_UTR | 30.0% | |
| TCTATTCAACTCAAACCCAA+AGG | - | tig0021430:54186-54205 | None:intergenic | 35.0% | |
| ATTATCAGTGAGAAAAGTGG+CGG | - | tig0021430:54323-54342 | None:intergenic | 35.0% | |
| !!! | CTTCTTTTAGGGTTAGGATT+AGG | - | tig0021430:54475-54494 | None:intergenic | 35.0% |
| ! | GTTAGTATTGGAAATCCAGT+TGG | + | tig0021430:54649-54668 | Msa1391370:CDS | 35.0% |
| ATCAAGGACTTCATGATTCA+AGG | + | tig0021430:54799-54818 | Msa1391370:CDS | 35.0% | |
| TCTATCTATCTATCTATCGC+AGG | + | tig0021430:54902-54921 | Msa1391370:intron | 35.0% | |
| CTATCTATCTATCTATCGCA+GGG | + | tig0021430:54903-54922 | Msa1391370:intron | 35.0% | |
| ! | TATGAAAAACTGACTCCCAT+TGG | - | tig0021430:55212-55231 | None:intergenic | 35.0% |
| ! | TGTTGTATTTGGCCAAGTTT+TGG | + | tig0021430:55351-55370 | Msa1391370:CDS | 35.0% |
| TTGTTAGGTCGATTGAATCA+CGG | + | tig0021430:55386-55405 | Msa1391370:CDS | 35.0% | |
| ACTGATTGTCACCTTCTTTA+GGG | - | tig0021430:55434-55453 | None:intergenic | 35.0% | |
| !!! | ACCTCCCTTATTTTCATACT+AGG | + | tig0021430:55585-55604 | Msa1391370:three_prime_UTR | 35.0% |
| TCCTAGTATGAAAATAAGGG+AGG | - | tig0021430:55589-55608 | None:intergenic | 35.0% | |
| TCTATTCAACTCAAACCCAA+AGG | - | tig0021430:54186-54205 | None:intergenic | 35.0% | |
| ATTATCAGTGAGAAAAGTGG+CGG | - | tig0021430:54323-54342 | None:intergenic | 35.0% | |
| !!! | CTTCTTTTAGGGTTAGGATT+AGG | - | tig0021430:54475-54494 | None:intergenic | 35.0% |
| ! | GTTAGTATTGGAAATCCAGT+TGG | + | tig0021430:54649-54668 | Msa1391370:CDS | 35.0% |
| ATCAAGGACTTCATGATTCA+AGG | + | tig0021430:54799-54818 | Msa1391370:CDS | 35.0% | |
| TCTATCTATCTATCTATCGC+AGG | + | tig0021430:54902-54921 | Msa1391370:intron | 35.0% | |
| CTATCTATCTATCTATCGCA+GGG | + | tig0021430:54903-54922 | Msa1391370:intron | 35.0% | |
| ! | TATGAAAAACTGACTCCCAT+TGG | - | tig0021430:55212-55231 | None:intergenic | 35.0% |
| ! | TGTTGTATTTGGCCAAGTTT+TGG | + | tig0021430:55351-55370 | Msa1391370:CDS | 35.0% |
| TTGTTAGGTCGATTGAATCA+CGG | + | tig0021430:55386-55405 | Msa1391370:CDS | 35.0% | |
| ACTGATTGTCACCTTCTTTA+GGG | - | tig0021430:55434-55453 | None:intergenic | 35.0% | |
| !!! | ACCTCCCTTATTTTCATACT+AGG | + | tig0021430:55585-55604 | Msa1391370:three_prime_UTR | 35.0% |
| TCCTAGTATGAAAATAAGGG+AGG | - | tig0021430:55589-55608 | None:intergenic | 35.0% | |
| TTCAACTCAAACCCAAAGGA+TGG | - | tig0021430:54182-54201 | None:intergenic | 40.0% | |
| ATCCTTCCTTCCTTCTTCTT+CGG | + | tig0021430:54250-54269 | Msa1391370:intron | 40.0% | |
| !!! | GAGATGCTTCTTTTAGGGTT+AGG | - | tig0021430:54481-54500 | None:intergenic | 40.0% |
| GGAAAATGGTAGTAGTTCAG+AGG | + | tig0021430:54579-54598 | Msa1391370:CDS | 40.0% | |
| AGGATTGTGATAGGACTCTT+TGG | + | tig0021430:54685-54704 | Msa1391370:CDS | 40.0% | |
| AAGGACTTCATGATTCAAGG+AGG | + | tig0021430:54802-54821 | Msa1391370:CDS | 40.0% | |
| CAAGGAGGAGACTTTGATAA+AGG | + | tig0021430:54817-54836 | Msa1391370:CDS | 40.0% | |
| ATATCTCCAGTGTCTCATAC+CGG | + | tig0021430:55148-55167 | Msa1391370:intron | 40.0% | |
| ! | GTTTTTCATATGCGCTGTCA+AGG | + | tig0021430:55222-55241 | Msa1391370:CDS | 40.0% |
| ! | GATCAGAGGCATGTTGTATT+TGG | + | tig0021430:55340-55359 | Msa1391370:CDS | 40.0% |
| !!! | GTATTTGGCCAAGTTTTGGA+AGG | + | tig0021430:55355-55374 | Msa1391370:CDS | 40.0% |
| TGTTAGGTCGATTGAATCAC+GGG | + | tig0021430:55387-55406 | Msa1391370:CDS | 40.0% | |
| CTGATTGTCACCTTCTTTAG+GGG | - | tig0021430:55433-55452 | None:intergenic | 40.0% | |
| ! | CACTGATTGTCACCTTCTTT+AGG | - | tig0021430:55435-55454 | None:intergenic | 40.0% |
| ! | TTCTTTGTTTCTTGCTGCTG+AGG | + | tig0021430:55504-55523 | Msa1391370:three_prime_UTR | 40.0% |
| TTCAACTCAAACCCAAAGGA+TGG | - | tig0021430:54182-54201 | None:intergenic | 40.0% | |
| ATCCTTCCTTCCTTCTTCTT+CGG | + | tig0021430:54250-54269 | Msa1391370:intron | 40.0% | |
| !!! | GAGATGCTTCTTTTAGGGTT+AGG | - | tig0021430:54481-54500 | None:intergenic | 40.0% |
| GGAAAATGGTAGTAGTTCAG+AGG | + | tig0021430:54579-54598 | Msa1391370:CDS | 40.0% | |
| AGGATTGTGATAGGACTCTT+TGG | + | tig0021430:54685-54704 | Msa1391370:CDS | 40.0% | |
| AAGGACTTCATGATTCAAGG+AGG | + | tig0021430:54802-54821 | Msa1391370:CDS | 40.0% | |
| CAAGGAGGAGACTTTGATAA+AGG | + | tig0021430:54817-54836 | Msa1391370:CDS | 40.0% | |
| ATATCTCCAGTGTCTCATAC+CGG | + | tig0021430:55148-55167 | Msa1391370:intron | 40.0% | |
| ! | GTTTTTCATATGCGCTGTCA+AGG | + | tig0021430:55222-55241 | Msa1391370:CDS | 40.0% |
| ! | GATCAGAGGCATGTTGTATT+TGG | + | tig0021430:55340-55359 | Msa1391370:CDS | 40.0% |
| !!! | GTATTTGGCCAAGTTTTGGA+AGG | + | tig0021430:55355-55374 | Msa1391370:CDS | 40.0% |
| TGTTAGGTCGATTGAATCAC+GGG | + | tig0021430:55387-55406 | Msa1391370:CDS | 40.0% | |
| CTGATTGTCACCTTCTTTAG+GGG | - | tig0021430:55433-55452 | None:intergenic | 40.0% | |
| ! | CACTGATTGTCACCTTCTTT+AGG | - | tig0021430:55435-55454 | None:intergenic | 40.0% |
| ! | TTCTTTGTTTCTTGCTGCTG+AGG | + | tig0021430:55504-55523 | Msa1391370:three_prime_UTR | 40.0% |
| ! | ATGGTGGTGAATCCATCCTT+TGG | + | tig0021430:54167-54186 | Msa1391370:intron | 45.0% |
| ! | TGGTGGTGAATCCATCCTTT+GGG | + | tig0021430:54168-54187 | Msa1391370:intron | 45.0% |
| TCAACACCGAAGAAGAAGGA+AGG | - | tig0021430:54259-54278 | None:intergenic | 45.0% | |
| TGGTTCAACACCGAAGAAGA+AGG | - | tig0021430:54263-54282 | None:intergenic | 45.0% | |
| TTGAATGCAGCAACAGCCAT+CGG | - | tig0021430:54287-54306 | None:intergenic | 45.0% | |
| GATTGATTGTCTTGGTTGGG+TGG | + | tig0021430:54424-54443 | Msa1391370:intron | 45.0% | |
| ! | CGACGGAGATGCTTCTTTTA+GGG | - | tig0021430:54486-54505 | None:intergenic | 45.0% |
| !! | CCTAAAAGAAGCATCTCCGT+CGG | + | tig0021430:54484-54503 | Msa1391370:CDS | 45.0% |
| !! | CTAAAAGAAGCATCTCCGTC+GGG | + | tig0021430:54485-54504 | Msa1391370:CDS | 45.0% |
| !! | TAAAAGAAGCATCTCCGTCG+GGG | + | tig0021430:54486-54505 | Msa1391370:CDS | 45.0% |
| TACGACGACAAGTGAAAGTG+AGG | + | tig0021430:54551-54570 | Msa1391370:CDS | 45.0% | |
| ACGACGACAAGTGAAAGTGA+GGG | + | tig0021430:54552-54571 | Msa1391370:CDS | 45.0% | |
| AAAGTGAGGGCTGTGGAAAA+TGG | + | tig0021430:54565-54584 | Msa1391370:CDS | 45.0% | |
| CTGGTTGGAAGGATTGTGAT+AGG | + | tig0021430:54676-54695 | Msa1391370:CDS | 45.0% | |
| GGAAGTTCTCAACAGTTTGC+GGG | - | tig0021430:54720-54739 | None:intergenic | 45.0% | |
| CGGAAGTTCTCAACAGTTTG+CGG | - | tig0021430:54721-54740 | None:intergenic | 45.0% | |
| ATCTATCTATCGCAGGGAAC+TGG | + | tig0021430:54909-54928 | Msa1391370:intron | 45.0% | |
| !! | ACTGGAGGCAAAAGTATCTC+TGG | + | tig0021430:54927-54946 | Msa1391370:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+GGG | - | tig0021430:55205-55224 | None:intergenic | 45.0% |
| ! | AAACTGACTCCCATTGGTGT+TGG | - | tig0021430:55206-55225 | None:intergenic | 45.0% |
| TGTCCATGCCTTCCAAAACT+TGG | - | tig0021430:55366-55385 | None:intergenic | 45.0% | |
| ! | TGGAAGGCATGGACATTGTT+AGG | + | tig0021430:55371-55390 | Msa1391370:CDS | 45.0% |
| AAGGTGACAATCAGTGACTG+TGG | + | tig0021430:55439-55458 | Msa1391370:CDS | 45.0% | |
| ! | ATGGTGGTGAATCCATCCTT+TGG | + | tig0021430:54167-54186 | Msa1391370:intron | 45.0% |
| ! | TGGTGGTGAATCCATCCTTT+GGG | + | tig0021430:54168-54187 | Msa1391370:intron | 45.0% |
| TCAACACCGAAGAAGAAGGA+AGG | - | tig0021430:54259-54278 | None:intergenic | 45.0% | |
| TGGTTCAACACCGAAGAAGA+AGG | - | tig0021430:54263-54282 | None:intergenic | 45.0% | |
| TTGAATGCAGCAACAGCCAT+CGG | - | tig0021430:54287-54306 | None:intergenic | 45.0% | |
| GATTGATTGTCTTGGTTGGG+TGG | + | tig0021430:54424-54443 | Msa1391370:intron | 45.0% | |
| ! | CGACGGAGATGCTTCTTTTA+GGG | - | tig0021430:54486-54505 | None:intergenic | 45.0% |
| !! | CCTAAAAGAAGCATCTCCGT+CGG | + | tig0021430:54484-54503 | Msa1391370:CDS | 45.0% |
| !! | CTAAAAGAAGCATCTCCGTC+GGG | + | tig0021430:54485-54504 | Msa1391370:CDS | 45.0% |
| !! | TAAAAGAAGCATCTCCGTCG+GGG | + | tig0021430:54486-54505 | Msa1391370:CDS | 45.0% |
| TACGACGACAAGTGAAAGTG+AGG | + | tig0021430:54551-54570 | Msa1391370:CDS | 45.0% | |
| ACGACGACAAGTGAAAGTGA+GGG | + | tig0021430:54552-54571 | Msa1391370:CDS | 45.0% | |
| AAAGTGAGGGCTGTGGAAAA+TGG | + | tig0021430:54565-54584 | Msa1391370:CDS | 45.0% | |
| CTGGTTGGAAGGATTGTGAT+AGG | + | tig0021430:54676-54695 | Msa1391370:CDS | 45.0% | |
| GGAAGTTCTCAACAGTTTGC+GGG | - | tig0021430:54720-54739 | None:intergenic | 45.0% | |
| CGGAAGTTCTCAACAGTTTG+CGG | - | tig0021430:54721-54740 | None:intergenic | 45.0% | |
| ATCTATCTATCGCAGGGAAC+TGG | + | tig0021430:54909-54928 | Msa1391370:intron | 45.0% | |
| !! | ACTGGAGGCAAAAGTATCTC+TGG | + | tig0021430:54927-54946 | Msa1391370:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+GGG | - | tig0021430:55205-55224 | None:intergenic | 45.0% |
| ! | AAACTGACTCCCATTGGTGT+TGG | - | tig0021430:55206-55225 | None:intergenic | 45.0% |
| TGTCCATGCCTTCCAAAACT+TGG | - | tig0021430:55366-55385 | None:intergenic | 45.0% | |
| ! | TGGAAGGCATGGACATTGTT+AGG | + | tig0021430:55371-55390 | Msa1391370:CDS | 45.0% |
| AAGGTGACAATCAGTGACTG+TGG | + | tig0021430:55439-55458 | Msa1391370:CDS | 45.0% | |
| TCGCGCGTGCGTTAAAATTG+AGG | - | tig0021430:54229-54248 | None:intergenic | 50.0% | |
| CACCGAAGAAGAAGGAAGGA+AGG | - | tig0021430:54255-54274 | None:intergenic | 50.0% | |
| !! | TTCGGTGTTGAACCAACCGA+TGG | + | tig0021430:54268-54287 | Msa1391370:intron | 50.0% |
| ! | CCGACGGAGATGCTTCTTTT+AGG | - | tig0021430:54487-54506 | None:intergenic | 50.0% |
| TAGTTTCACACCCACACCTC+GGG | - | tig0021430:54521-54540 | None:intergenic | 50.0% | |
| CTAGTTTCACACCCACACCT+CGG | - | tig0021430:54522-54541 | None:intergenic | 50.0% | |
| GTGGGTGTGAAACTAGCAGT+AGG | + | tig0021430:54526-54545 | Msa1391370:CDS | 50.0% | |
| ACAAGTGAAAGTGAGGGCTG+TGG | + | tig0021430:54558-54577 | Msa1391370:CDS | 50.0% | |
| TGGAAATCCAGTTGGGAAGC+TGG | + | tig0021430:54657-54676 | Msa1391370:CDS | 50.0% | |
| AATCCAGTTGGGAAGCTGGT+TGG | + | tig0021430:54661-54680 | Msa1391370:CDS | 50.0% | |
| !! | TGAAGTCCTTGATGACGCGA+TGG | - | tig0021430:54792-54811 | None:intergenic | 50.0% |
| TATCTATCGCAGGGAACTGG+AGG | + | tig0021430:54912-54931 | Msa1391370:intron | 50.0% | |
| TTTGCCATGCTAACAGCTCC+TGG | - | tig0021430:55175-55194 | None:intergenic | 50.0% | |
| GCTGTTAGCATGGCAAATGC+TGG | + | tig0021430:55178-55197 | Msa1391370:CDS | 50.0% | |
| AATGCTGGTCCCAACACCAA+TGG | + | tig0021430:55193-55212 | Msa1391370:CDS | 50.0% | |
| ATGCTGGTCCCAACACCAAT+GGG | + | tig0021430:55194-55213 | Msa1391370:CDS | 50.0% | |
| !!! | TGGCCAAGTTTTGGAAGGCA+TGG | + | tig0021430:55360-55379 | Msa1391370:CDS | 50.0% |
| TGGTGATCGTCCCCTAAAGA+AGG | + | tig0021430:55420-55439 | Msa1391370:CDS | 50.0% | |
| TCGCGCGTGCGTTAAAATTG+AGG | - | tig0021430:54229-54248 | None:intergenic | 50.0% | |
| CACCGAAGAAGAAGGAAGGA+AGG | - | tig0021430:54255-54274 | None:intergenic | 50.0% | |
| !! | TTCGGTGTTGAACCAACCGA+TGG | + | tig0021430:54268-54287 | Msa1391370:intron | 50.0% |
| ! | CCGACGGAGATGCTTCTTTT+AGG | - | tig0021430:54487-54506 | None:intergenic | 50.0% |
| TAGTTTCACACCCACACCTC+GGG | - | tig0021430:54521-54540 | None:intergenic | 50.0% | |
| CTAGTTTCACACCCACACCT+CGG | - | tig0021430:54522-54541 | None:intergenic | 50.0% | |
| GTGGGTGTGAAACTAGCAGT+AGG | + | tig0021430:54526-54545 | Msa1391370:CDS | 50.0% | |
| ACAAGTGAAAGTGAGGGCTG+TGG | + | tig0021430:54558-54577 | Msa1391370:CDS | 50.0% | |
| TGGAAATCCAGTTGGGAAGC+TGG | + | tig0021430:54657-54676 | Msa1391370:CDS | 50.0% | |
| AATCCAGTTGGGAAGCTGGT+TGG | + | tig0021430:54661-54680 | Msa1391370:CDS | 50.0% | |
| !! | TGAAGTCCTTGATGACGCGA+TGG | - | tig0021430:54792-54811 | None:intergenic | 50.0% |
| TATCTATCGCAGGGAACTGG+AGG | + | tig0021430:54912-54931 | Msa1391370:intron | 50.0% | |
| TTTGCCATGCTAACAGCTCC+TGG | - | tig0021430:55175-55194 | None:intergenic | 50.0% | |
| GCTGTTAGCATGGCAAATGC+TGG | + | tig0021430:55178-55197 | Msa1391370:CDS | 50.0% | |
| AATGCTGGTCCCAACACCAA+TGG | + | tig0021430:55193-55212 | Msa1391370:CDS | 50.0% | |
| ATGCTGGTCCCAACACCAAT+GGG | + | tig0021430:55194-55213 | Msa1391370:CDS | 50.0% | |
| !!! | TGGCCAAGTTTTGGAAGGCA+TGG | + | tig0021430:55360-55379 | Msa1391370:CDS | 50.0% |
| TGGTGATCGTCCCCTAAAGA+AGG | + | tig0021430:55420-55439 | Msa1391370:CDS | 50.0% | |
| ATGCAGCAACAGCCATCGGT+TGG | - | tig0021430:54283-54302 | None:intergenic | 55.0% | |
| CTTCCAACCAGCTTCCCAAC+TGG | - | tig0021430:54667-54686 | None:intergenic | 55.0% | |
| CAGTTGGGAAGCTGGTTGGA+AGG | + | tig0021430:54665-54684 | Msa1391370:CDS | 55.0% | |
| TCTCACTGGTGGAAAGGGCA+CGG | - | tig0021430:54741-54760 | None:intergenic | 55.0% | |
| TGCCCTTTCCACCAGTGAGA+AGG | + | tig0021430:54741-54760 | Msa1391370:CDS | 55.0% | |
| GCCCTTTCCACCAGTGAGAA+GGG | + | tig0021430:54742-54761 | Msa1391370:CDS | 55.0% | |
| GCCCTTCTCACTGGTGGAAA+GGG | - | tig0021430:54746-54765 | None:intergenic | 55.0% | |
| AGCCCTTCTCACTGGTGGAA+AGG | - | tig0021430:54747-54766 | None:intergenic | 55.0% | |
| TCCACCAGTGAGAAGGGCTT+TGG | + | tig0021430:54748-54767 | Msa1391370:CDS | 55.0% | |
| GTAGCCAAAGCCCTTCTCAC+TGG | - | tig0021430:54755-54774 | None:intergenic | 55.0% | |
| !! | CTTGATGACGCGATGGAAGG+TGG | - | tig0021430:54785-54804 | None:intergenic | 55.0% |
| CACCTTCCATCGCGTCATCA+AGG | + | tig0021430:54783-54802 | Msa1391370:CDS | 55.0% | |
| !! | GTCCTTGATGACGCGATGGA+AGG | - | tig0021430:54788-54807 | None:intergenic | 55.0% |
| CATGCTAACAGCTCCTGGTC+CGG | - | tig0021430:55170-55189 | None:intergenic | 55.0% | |
| CATGACATTGGCAGACGCTG+TGG | + | tig0021430:55314-55333 | Msa1391370:intron | 55.0% | |
| GAATCACGGGAGACTGATCG+TGG | + | tig0021430:55400-55419 | Msa1391370:CDS | 55.0% | |
| ATGCAGCAACAGCCATCGGT+TGG | - | tig0021430:54283-54302 | None:intergenic | 55.0% | |
| CTTCCAACCAGCTTCCCAAC+TGG | - | tig0021430:54667-54686 | None:intergenic | 55.0% | |
| CAGTTGGGAAGCTGGTTGGA+AGG | + | tig0021430:54665-54684 | Msa1391370:CDS | 55.0% | |
| TCTCACTGGTGGAAAGGGCA+CGG | - | tig0021430:54741-54760 | None:intergenic | 55.0% | |
| TGCCCTTTCCACCAGTGAGA+AGG | + | tig0021430:54741-54760 | Msa1391370:CDS | 55.0% | |
| GCCCTTTCCACCAGTGAGAA+GGG | + | tig0021430:54742-54761 | Msa1391370:CDS | 55.0% | |
| GCCCTTCTCACTGGTGGAAA+GGG | - | tig0021430:54746-54765 | None:intergenic | 55.0% | |
| AGCCCTTCTCACTGGTGGAA+AGG | - | tig0021430:54747-54766 | None:intergenic | 55.0% | |
| TCCACCAGTGAGAAGGGCTT+TGG | + | tig0021430:54748-54767 | Msa1391370:CDS | 55.0% | |
| GTAGCCAAAGCCCTTCTCAC+TGG | - | tig0021430:54755-54774 | None:intergenic | 55.0% | |
| !! | CTTGATGACGCGATGGAAGG+TGG | - | tig0021430:54785-54804 | None:intergenic | 55.0% |
| CACCTTCCATCGCGTCATCA+AGG | + | tig0021430:54783-54802 | Msa1391370:CDS | 55.0% | |
| !! | GTCCTTGATGACGCGATGGA+AGG | - | tig0021430:54788-54807 | None:intergenic | 55.0% |
| CATGCTAACAGCTCCTGGTC+CGG | - | tig0021430:55170-55189 | None:intergenic | 55.0% | |
| CATGACATTGGCAGACGCTG+TGG | + | tig0021430:55314-55333 | Msa1391370:intron | 55.0% | |
| GAATCACGGGAGACTGATCG+TGG | + | tig0021430:55400-55419 | Msa1391370:CDS | 55.0% | |
| !! | AAGAAGCATCTCCGTCGGGG+TGG | + | tig0021430:54489-54508 | Msa1391370:CDS | 60.0% |
| GTGGTTAGGTCCCGAGGTGT+GGG | + | tig0021430:54508-54527 | Msa1391370:CDS | 60.0% | |
| GCCAAAGCCCTTCTCACTGG+TGG | - | tig0021430:54752-54771 | None:intergenic | 60.0% | |
| GATGACGCGATGGAAGGTGG+AGG | - | tig0021430:54782-54801 | None:intergenic | 60.0% | |
| CCTGGTCCGGTATGAGACAC+TGG | - | tig0021430:55157-55176 | None:intergenic | 60.0% | |
| CCAGTGTCTCATACCGGACC+AGG | + | tig0021430:55154-55173 | Msa1391370:intron | 60.0% | |
| CGGACCAGGAGCTGTTAGCA+TGG | + | tig0021430:55168-55187 | Msa1391370:CDS | 60.0% | |
| ACATTGGCAGACGCTGTGGC+TGG | + | tig0021430:55318-55337 | Msa1391370:intron | 60.0% | |
| AGACGCTGTGGCTGGATCAG+AGG | + | tig0021430:55326-55345 | Msa1391370:intron | 60.0% | |
| !! | AAGAAGCATCTCCGTCGGGG+TGG | + | tig0021430:54489-54508 | Msa1391370:CDS | 60.0% |
| GTGGTTAGGTCCCGAGGTGT+GGG | + | tig0021430:54508-54527 | Msa1391370:CDS | 60.0% | |
| GCCAAAGCCCTTCTCACTGG+TGG | - | tig0021430:54752-54771 | None:intergenic | 60.0% | |
| GATGACGCGATGGAAGGTGG+AGG | - | tig0021430:54782-54801 | None:intergenic | 60.0% | |
| CCTGGTCCGGTATGAGACAC+TGG | - | tig0021430:55157-55176 | None:intergenic | 60.0% | |
| CCAGTGTCTCATACCGGACC+AGG | + | tig0021430:55154-55173 | Msa1391370:intron | 60.0% | |
| CGGACCAGGAGCTGTTAGCA+TGG | + | tig0021430:55168-55187 | Msa1391370:CDS | 60.0% | |
| ACATTGGCAGACGCTGTGGC+TGG | + | tig0021430:55318-55337 | Msa1391370:intron | 60.0% | |
| AGACGCTGTGGCTGGATCAG+AGG | + | tig0021430:55326-55345 | Msa1391370:intron | 60.0% | |
| GCATCTCCGTCGGGGTGGTT+AGG | + | tig0021430:54494-54513 | Msa1391370:CDS | 65.0% | |
| TCGGGACCTAACCACCCCGA+CGG | - | tig0021430:54503-54522 | None:intergenic | 65.0% | |
| GGTGGTTAGGTCCCGAGGTG+TGG | + | tig0021430:54507-54526 | Msa1391370:CDS | 65.0% | |
| GCATCTCCGTCGGGGTGGTT+AGG | + | tig0021430:54494-54513 | Msa1391370:CDS | 65.0% | |
| TCGGGACCTAACCACCCCGA+CGG | - | tig0021430:54503-54522 | None:intergenic | 65.0% | |
| GGTGGTTAGGTCCCGAGGTG+TGG | + | tig0021430:54507-54526 | Msa1391370:CDS | 65.0% | |
| GTCGGGGTGGTTAGGTCCCG+AGG | + | tig0021430:54502-54521 | Msa1391370:CDS | 70.0% | |
| GTCGGGGTGGTTAGGTCCCG+AGG | + | tig0021430:54502-54521 | Msa1391370:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021430 | gene | 54167 | 55663 | 54167 | ID=Msa1391370;Name=Msa1391370 |
| tig0021430 | mRNA | 54167 | 55663 | 54167 | ID=Msa1391370-mRNA-1;Parent=Msa1391370;Name=Msa1391370-mRNA-1;_AED=0.14;_eAED=0.15;_QI=0|0.6|0.5|1|1|1|6|183|226 |
| tig0021430 | exon | 54167 | 54172 | 54167 | ID=Msa1391370-mRNA-1:exon:12634;Parent=Msa1391370-mRNA-1 |
| tig0021430 | exon | 54451 | 54606 | 54451 | ID=Msa1391370-mRNA-1:exon:12635;Parent=Msa1391370-mRNA-1 |
| tig0021430 | exon | 54619 | 54843 | 54619 | ID=Msa1391370-mRNA-1:exon:12636;Parent=Msa1391370-mRNA-1 |
| tig0021430 | exon | 54924 | 54978 | 54924 | ID=Msa1391370-mRNA-1:exon:12637;Parent=Msa1391370-mRNA-1 |
| tig0021430 | exon | 55158 | 55243 | 55158 | ID=Msa1391370-mRNA-1:exon:12638;Parent=Msa1391370-mRNA-1 |
| tig0021430 | exon | 55328 | 55663 | 55328 | ID=Msa1391370-mRNA-1:exon:12639;Parent=Msa1391370-mRNA-1 |
| tig0021430 | CDS | 54167 | 54172 | 54167 | ID=Msa1391370-mRNA-1:cds;Parent=Msa1391370-mRNA-1 |
| tig0021430 | CDS | 54451 | 54606 | 54451 | ID=Msa1391370-mRNA-1:cds;Parent=Msa1391370-mRNA-1 |
| tig0021430 | CDS | 54619 | 54843 | 54619 | ID=Msa1391370-mRNA-1:cds;Parent=Msa1391370-mRNA-1 |
| tig0021430 | CDS | 54924 | 54978 | 54924 | ID=Msa1391370-mRNA-1:cds;Parent=Msa1391370-mRNA-1 |
| tig0021430 | CDS | 55158 | 55243 | 55158 | ID=Msa1391370-mRNA-1:cds;Parent=Msa1391370-mRNA-1 |
| tig0021430 | CDS | 55328 | 55480 | 55328 | ID=Msa1391370-mRNA-1:cds;Parent=Msa1391370-mRNA-1 |
| tig0021430 | three_prime_UTR | 55481 | 55663 | 55481 | ID=Msa1391370-mRNA-1:three_prime_utr;Parent=Msa1391370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
