Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389470 | XP_013470516.1 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 7.84e-146 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389470 | sp|Q9ASS6|PNSL5_ARATH | 78.977 | 176 | 37 | 0 | 51 | 226 | 82 | 257 | 4.45e-106 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389470 | I3S7Z5 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 3.74e-146 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa1389470 | 0.801749 | 7.773087e-49 | -8.615850e-47 |
| Msa0003470 | Msa1389470 | 0.825832 | 3.780245e-54 | -8.615850e-47 |
| Msa0005710 | Msa1389470 | 0.811957 | 5.397158e-51 | -8.615850e-47 |
| Msa0007450 | Msa1389470 | 0.812621 | 3.867100e-51 | -8.615850e-47 |
| Msa0017120 | Msa1389470 | 0.823599 | 1.270306e-53 | -8.615850e-47 |
| Msa0017940 | Msa1389470 | 0.822671 | 2.091111e-53 | -8.615850e-47 |
| Msa0018220 | Msa1389470 | 0.823971 | 1.038851e-53 | -8.615850e-47 |
| Msa0024680 | Msa1389470 | 0.849892 | 2.414711e-60 | -8.615850e-47 |
| Msa0027540 | Msa1389470 | 0.814681 | 1.361411e-51 | -8.615850e-47 |
| Msa0030310 | Msa1389470 | 0.824106 | 9.659791e-54 | -8.615850e-47 |
| Msa0032120 | Msa1389470 | 0.800406 | 1.463246e-48 | -8.615850e-47 |
| Msa0032400 | Msa1389470 | 0.813749 | 2.186266e-51 | -8.615850e-47 |
| Msa0032840 | Msa1389470 | -0.802312 | 5.956974e-49 | -8.615850e-47 |
| Msa0044220 | Msa1389470 | 0.821151 | 4.702925e-53 | -8.615850e-47 |
| Msa0048020 | Msa1389470 | 0.844210 | 8.706413e-59 | -8.615850e-47 |
| Msa0050580 | Msa1389470 | 0.818151 | 2.276711e-52 | -8.615850e-47 |
| Msa0052460 | Msa1389470 | 0.828155 | 1.051938e-54 | -8.615850e-47 |
| Msa0059960 | Msa1389470 | -0.805323 | 1.411184e-49 | -8.615850e-47 |
| Msa0060350 | Msa1389470 | 0.806822 | 6.826713e-50 | -8.615850e-47 |
| Msa0073820 | Msa1389470 | 0.817451 | 3.275024e-52 | -8.615850e-47 |
| Msa0075310 | Msa1389470 | 0.804924 | 1.709773e-49 | -8.615850e-47 |
| Msa0079040 | Msa1389470 | 0.808937 | 2.423228e-50 | -8.615850e-47 |
| Msa0082820 | Msa1389470 | 0.803279 | 3.759883e-49 | -8.615850e-47 |
| Msa0084680 | Msa1389470 | 0.802544 | 5.335643e-49 | -8.615850e-47 |
| Msa0089210 | Msa1389470 | 0.818789 | 1.631936e-52 | -8.615850e-47 |
| Msa0092660 | Msa1389470 | 0.801817 | 7.526980e-49 | -8.615850e-47 |
| Msa0092730 | Msa1389470 | 0.805702 | 1.174914e-49 | -8.615850e-47 |
| Msa0094420 | Msa1389470 | 0.815521 | 8.858850e-52 | -8.615850e-47 |
| Msa0096670 | Msa1389470 | 0.801225 | 9.954702e-49 | -8.615850e-47 |
| Msa0097050 | Msa1389470 | 0.823178 | 1.592675e-53 | -8.615850e-47 |
| Msa0103780 | Msa1389470 | 0.808822 | 2.563717e-50 | -8.615850e-47 |
| Msa0105210 | Msa1389470 | 0.807067 | 6.056557e-50 | -8.615850e-47 |
| Msa0120330 | Msa1389470 | 0.830985 | 2.157177e-55 | -8.615850e-47 |
| Msa1350670 | Msa1389470 | 0.857589 | 1.472270e-62 | -8.615850e-47 |
| Msa1352290 | Msa1389470 | 0.807568 | 4.742619e-50 | -8.615850e-47 |
| Msa1354040 | Msa1389470 | 0.825895 | 3.652637e-54 | -8.615850e-47 |
| Msa1355400 | Msa1389470 | 0.820787 | 5.703628e-53 | -8.615850e-47 |
| Msa1367940 | Msa1389470 | 0.814261 | 1.685814e-51 | -8.615850e-47 |
| Msa1368730 | Msa1389470 | 0.801847 | 7.421669e-49 | -8.615850e-47 |
| Msa1376640 | Msa1389470 | 0.811482 | 6.850034e-51 | -8.615850e-47 |
| Msa1379980 | Msa1389470 | 0.842328 | 2.765001e-58 | -8.615850e-47 |
| Msa1381130 | Msa1389470 | 0.808765 | 2.637509e-50 | -8.615850e-47 |
| Msa1382310 | Msa1389470 | 0.816997 | 4.142653e-52 | -8.615850e-47 |
| Msa1382720 | Msa1389470 | 0.840604 | 7.868053e-58 | -8.615850e-47 |
| Msa1385620 | Msa1389470 | 0.813210 | 2.872248e-51 | -8.615850e-47 |
| Msa1385900 | Msa1389470 | 0.827347 | 1.645197e-54 | -8.615850e-47 |
| Msa1389470 | Msa1390310 | 0.835341 | 1.775050e-56 | -8.615850e-47 |
| Msa1389470 | Msa1391370 | 0.993456 | 7.291162e-200 | -8.615850e-47 |
| Msa1389470 | Msa1398480 | 0.802061 | 6.708674e-49 | -8.615850e-47 |
| Msa1389470 | Msa1405770 | 0.811787 | 5.877826e-51 | -8.615850e-47 |
| Msa1389470 | Msa1406550 | 0.811048 | 8.506883e-51 | -8.615850e-47 |
| Msa1389470 | Msa1407710 | 0.814674 | 1.365957e-51 | -8.615850e-47 |
| Msa1389470 | Msa1410170 | 0.806083 | 9.772084e-50 | -8.615850e-47 |
| Msa1389470 | Msa1420060 | 0.804182 | 2.442843e-49 | -8.615850e-47 |
| Msa1389470 | Msa1421810 | 0.809263 | 2.062926e-50 | -8.615850e-47 |
| Msa1389470 | Msa1431000 | 0.807618 | 4.628579e-50 | -8.615850e-47 |
| Msa1389470 | Msa1435040 | 0.809583 | 1.761196e-50 | -8.615850e-47 |
| Msa1389470 | Msa1435050 | 0.841747 | 3.938029e-58 | -8.615850e-47 |
| Msa1389470 | Msa1439670 | 0.826599 | 2.483480e-54 | -8.615850e-47 |
| Msa1389470 | Msa1439680 | 0.811355 | 7.299212e-51 | -8.615850e-47 |
| Msa1389470 | Msa1442300 | 0.834900 | 2.293452e-56 | -8.615850e-47 |
| Msa1389470 | Msa1444450 | 0.805876 | 1.080098e-49 | -8.615850e-47 |
| Msa1389470 | Msa1447230 | 0.842747 | 2.141128e-58 | -8.615850e-47 |
| Msa1389470 | Msa1462500 | 0.809975 | 1.450491e-50 | -8.615850e-47 |
| Msa1389470 | Msa1462510 | 0.977355 | 1.293639e-143 | -8.615850e-47 |
| Msa0607480 | Msa1389470 | 0.834798 | 2.433302e-56 | -8.615850e-47 |
| Msa0614230 | Msa1389470 | 0.803988 | 2.680423e-49 | -8.615850e-47 |
| Msa0619330 | Msa1389470 | 0.830563 | 2.736964e-55 | -8.615850e-47 |
| Msa0621890 | Msa1389470 | 0.801555 | 8.519445e-49 | -8.615850e-47 |
| Msa0629290 | Msa1389470 | 0.825768 | 3.915042e-54 | -8.615850e-47 |
| Msa0634270 | Msa1389470 | 0.810912 | 9.105634e-51 | -8.615850e-47 |
| Msa0638690 | Msa1389470 | 0.803145 | 4.009223e-49 | -8.615850e-47 |
| Msa0640880 | Msa1389470 | 0.830475 | 2.876291e-55 | -8.615850e-47 |
| Msa0642650 | Msa1389470 | 0.853396 | 2.457098e-61 | -8.615850e-47 |
| Msa0642910 | Msa1389470 | 0.816320 | 5.877575e-52 | -8.615850e-47 |
| Msa0647750 | Msa1389470 | 0.809066 | 2.273068e-50 | -8.615850e-47 |
| Msa0659040 | Msa1389470 | 0.807619 | 4.625678e-50 | -8.615850e-47 |
| Msa0678890 | Msa1389470 | 0.826050 | 3.356142e-54 | -8.615850e-47 |
| Msa0681890 | Msa1389470 | 0.847620 | 1.030252e-59 | -8.615850e-47 |
| Msa0682400 | Msa1389470 | 0.830870 | 2.301373e-55 | -8.615850e-47 |
| Msa0688540 | Msa1389470 | 0.801665 | 8.087974e-49 | -8.615850e-47 |
| Msa0690170 | Msa1389470 | 0.823450 | 1.376523e-53 | -8.615850e-47 |
| Msa0691160 | Msa1389470 | 0.808313 | 3.293005e-50 | -8.615850e-47 |
| Msa0693570 | Msa1389470 | 0.808213 | 3.458348e-50 | -8.615850e-47 |
| Msa0703720 | Msa1389470 | 0.849398 | 3.318486e-60 | -8.615850e-47 |
| Msa0703760 | Msa1389470 | 0.843214 | 1.607913e-58 | -8.615850e-47 |
| Msa0704990 | Msa1389470 | 0.801817 | 7.526822e-49 | -8.615850e-47 |
| Msa0707780 | Msa1389470 | 0.821489 | 3.929923e-53 | -8.615850e-47 |
| Msa0709480 | Msa1389470 | 0.838932 | 2.142735e-57 | -8.615850e-47 |
| Msa0717090 | Msa1389470 | 0.816984 | 4.172465e-52 | -8.615850e-47 |
| Msa0722940 | Msa1389470 | 0.818929 | 1.516459e-52 | -8.615850e-47 |
| Msa0723150 | Msa1389470 | 0.818553 | 1.846180e-52 | -8.615850e-47 |
| Msa0730180 | Msa1389470 | 0.829845 | 4.097252e-55 | -8.615850e-47 |
| Msa0770430 | Msa1389470 | 0.819878 | 9.213714e-53 | -8.615850e-47 |
| Msa0790830 | Msa1389470 | 0.814131 | 1.800933e-51 | -8.615850e-47 |
| Msa0797220 | Msa1389470 | 0.811062 | 8.448234e-51 | -8.615850e-47 |
| Msa0799210 | Msa1389470 | 0.805558 | 1.259896e-49 | -8.615850e-47 |
| Msa0802500 | Msa1389470 | 0.805253 | 1.459399e-49 | -8.615850e-47 |
| Msa0803130 | Msa1389470 | 0.828633 | 8.065396e-55 | -8.615850e-47 |
| Msa0804110 | Msa1389470 | 0.800879 | 1.171479e-48 | -8.615850e-47 |
| Msa0820670 | Msa1389470 | 0.802312 | 5.954957e-49 | -8.615850e-47 |
| Msa0841490 | Msa1389470 | 0.826715 | 2.330465e-54 | -8.615850e-47 |
| Msa0139900 | Msa1389470 | 0.827088 | 1.897464e-54 | -8.615850e-47 |
| Msa0141430 | Msa1389470 | 0.844079 | 9.438905e-59 | -8.615850e-47 |
| Msa0141670 | Msa1389470 | 0.802400 | 5.712263e-49 | -8.615850e-47 |
| Msa0141830 | Msa1389470 | 0.829537 | 4.870679e-55 | -8.615850e-47 |
| Msa0143970 | Msa1389470 | 0.818097 | 2.341889e-52 | -8.615850e-47 |
| Msa0146470 | Msa1389470 | 0.818107 | 2.329027e-52 | -8.615850e-47 |
| Msa0148780 | Msa1389470 | 0.805558 | 1.259602e-49 | -8.615850e-47 |
| Msa0157020 | Msa1389470 | 0.831304 | 1.800540e-55 | -8.615850e-47 |
| Msa0162030 | Msa1389470 | 0.807419 | 5.101817e-50 | -8.615850e-47 |
| Msa0162050 | Msa1389470 | 0.812149 | 4.903093e-51 | -8.615850e-47 |
| Msa0163550 | Msa1389470 | 0.801060 | 1.075907e-48 | -8.615850e-47 |
| Msa0168100 | Msa1389470 | 0.809012 | 2.334629e-50 | -8.615850e-47 |
| Msa0171780 | Msa1389470 | 0.814482 | 1.506846e-51 | -8.615850e-47 |
| Msa0171930 | Msa1389470 | 0.805703 | 1.174198e-49 | -8.615850e-47 |
| Msa0172350 | Msa1389470 | 0.824662 | 7.146637e-54 | -8.615850e-47 |
| Msa0172960 | Msa1389470 | -0.819338 | 1.223858e-52 | -8.615850e-47 |
| Msa0183610 | Msa1389470 | 0.803082 | 4.131397e-49 | -8.615850e-47 |
| Msa0183620 | Msa1389470 | 0.807250 | 5.540146e-50 | -8.615850e-47 |
| Msa0185390 | Msa1389470 | 0.803746 | 3.009047e-49 | -8.615850e-47 |
| Msa0185700 | Msa1389470 | 0.810335 | 1.213483e-50 | -8.615850e-47 |
| Msa0199710 | Msa1389470 | 0.812332 | 4.471909e-51 | -8.615850e-47 |
| Msa0200970 | Msa1389470 | 0.803542 | 3.316739e-49 | -8.615850e-47 |
| Msa0207000 | Msa1389470 | 0.827476 | 1.532031e-54 | -8.615850e-47 |
| Msa0207180 | Msa1389470 | 0.806868 | 6.673813e-50 | -8.615850e-47 |
| Msa0223390 | Msa1389470 | 0.803740 | 3.017252e-49 | -8.615850e-47 |
| Msa0227500 | Msa1389470 | 0.809746 | 1.624655e-50 | -8.615850e-47 |
| Msa0230550 | Msa1389470 | -0.804685 | 1.918512e-49 | -8.615850e-47 |
| Msa1224670 | Msa1389470 | 0.844210 | 8.705513e-59 | -8.615850e-47 |
| Msa1234960 | Msa1389470 | 0.810086 | 1.372691e-50 | -8.615850e-47 |
| Msa1235890 | Msa1389470 | 0.817736 | 2.825313e-52 | -8.615850e-47 |
| Msa1237030 | Msa1389470 | 0.818219 | 2.197098e-52 | -8.615850e-47 |
| Msa1250670 | Msa1389470 | 0.825333 | 4.964018e-54 | -8.615850e-47 |
| Msa1254800 | Msa1389470 | 0.801387 | 9.222714e-49 | -8.615850e-47 |
| Msa1261360 | Msa1389470 | 0.800243 | 1.579325e-48 | -8.615850e-47 |
| Msa1263030 | Msa1389470 | 0.839185 | 1.842752e-57 | -8.615850e-47 |
| Msa1265960 | Msa1389470 | 0.808885 | 2.486076e-50 | -8.615850e-47 |
| Msa1271510 | Msa1389470 | 0.831684 | 1.451857e-55 | -8.615850e-47 |
| Msa1271600 | Msa1389470 | 0.820993 | 5.112817e-53 | -8.615850e-47 |
| Msa1280120 | Msa1389470 | 0.808928 | 2.433786e-50 | -8.615850e-47 |
| Msa1280130 | Msa1389470 | 0.804663 | 1.938671e-49 | -8.615850e-47 |
| Msa1293530 | Msa1389470 | 0.803556 | 3.295675e-49 | -8.615850e-47 |
| Msa1302150 | Msa1389470 | 0.812948 | 3.278939e-51 | -8.615850e-47 |
| Msa1306770 | Msa1389470 | 0.805705 | 1.173339e-49 | -8.615850e-47 |
| Msa1307370 | Msa1389470 | 0.833084 | 6.532205e-56 | -8.615850e-47 |
| Msa1309100 | Msa1389470 | 0.808043 | 3.760055e-50 | -8.615850e-47 |
| Msa1309360 | Msa1389470 | 0.810965 | 8.866819e-51 | -8.615850e-47 |
| Msa1315980 | Msa1389470 | 0.815714 | 8.023252e-52 | -8.615850e-47 |
| Msa1323060 | Msa1389470 | 0.812356 | 4.417761e-51 | -8.615850e-47 |
| Msa1325980 | Msa1389470 | 0.812298 | 4.548386e-51 | -8.615850e-47 |
| Msa1337090 | Msa1389470 | 0.804406 | 2.193214e-49 | -8.615850e-47 |
| Msa1337340 | Msa1389470 | 0.802178 | 6.345371e-49 | -8.615850e-47 |
| Msa0370600 | Msa1389470 | 0.821690 | 3.531624e-53 | -8.615850e-47 |
| Msa0374070 | Msa1389470 | 0.814663 | 1.373717e-51 | -8.615850e-47 |
| Msa0378340 | Msa1389470 | 0.837663 | 4.550781e-57 | -8.615850e-47 |
| Msa0382290 | Msa1389470 | 0.810397 | 1.176506e-50 | -8.615850e-47 |
| Msa0382560 | Msa1389470 | 0.807406 | 5.133623e-50 | -8.615850e-47 |
| Msa0411520 | Msa1389470 | 0.805052 | 1.608117e-49 | -8.615850e-47 |
| Msa0417630 | Msa1389470 | 0.842797 | 2.075772e-58 | -8.615850e-47 |
| Msa0418200 | Msa1389470 | 0.822354 | 2.477009e-53 | -8.615850e-47 |
| Msa0423250 | Msa1389470 | 0.816284 | 5.986515e-52 | -8.615850e-47 |
| Msa0423360 | Msa1389470 | -0.813258 | 2.804150e-51 | -8.615850e-47 |
| Msa0427520 | Msa1389470 | -0.811387 | 7.181656e-51 | -8.615850e-47 |
| Msa0427690 | Msa1389470 | 0.841211 | 5.450825e-58 | -8.615850e-47 |
| Msa0429520 | Msa1389470 | -0.813210 | 2.872875e-51 | -8.615850e-47 |
| Msa0429530 | Msa1389470 | -0.809020 | 2.325941e-50 | -8.615850e-47 |
| Msa0431430 | Msa1389470 | 0.805090 | 1.579089e-49 | -8.615850e-47 |
| Msa0432680 | Msa1389470 | 0.802514 | 5.410230e-49 | -8.615850e-47 |
| Msa0436450 | Msa1389470 | 0.849075 | 4.079621e-60 | -8.615850e-47 |
| Msa0440480 | Msa1389470 | 0.876445 | 1.388626e-68 | -8.615850e-47 |
| Msa0442880 | Msa1389470 | 0.801929 | 7.140011e-49 | -8.615850e-47 |
| Msa0461640 | Msa1389470 | 0.807486 | 4.937925e-50 | -8.615850e-47 |
| Msa0464540 | Msa1389470 | 0.802475 | 5.513673e-49 | -8.615850e-47 |
| Msa0465860 | Msa1389470 | 0.818616 | 1.786379e-52 | -8.615850e-47 |
| Msa0469390 | Msa1389470 | 0.801839 | 7.451108e-49 | -8.615850e-47 |
| Msa0469910 | Msa1389470 | -0.804769 | 1.842178e-49 | -8.615850e-47 |
| Msa0480150 | Msa1389470 | 0.803199 | 3.906929e-49 | -8.615850e-47 |
| Msa0990520 | Msa1389470 | 0.836550 | 8.765151e-57 | -8.615850e-47 |
| Msa0996080 | Msa1389470 | 0.822138 | 2.781113e-53 | -8.615850e-47 |
| Msa0996090 | Msa1389470 | 0.809577 | 1.766535e-50 | -8.615850e-47 |
| Msa1002040 | Msa1389470 | 0.827504 | 1.508714e-54 | -8.615850e-47 |
| Msa1004500 | Msa1389470 | 0.804073 | 2.573545e-49 | -8.615850e-47 |
| Msa1014270 | Msa1389470 | 0.815124 | 1.085869e-51 | -8.615850e-47 |
| Msa1022310 | Msa1389470 | 0.828131 | 1.065796e-54 | -8.615850e-47 |
| Msa1027150 | Msa1389470 | 0.826500 | 2.622336e-54 | -8.615850e-47 |
| Msa1027790 | Msa1389470 | 0.816824 | 4.531042e-52 | -8.615850e-47 |
| Msa1044340 | Msa1389470 | 0.838895 | 2.191223e-57 | -8.615850e-47 |
| Msa1045970 | Msa1389470 | 0.803258 | 3.797866e-49 | -8.615850e-47 |
| Msa1046870 | Msa1389470 | 0.820329 | 7.264923e-53 | -8.615850e-47 |
| Msa1050240 | Msa1389470 | 0.800039 | 1.737625e-48 | -8.615850e-47 |
| Msa1051300 | Msa1389470 | 0.800130 | 1.664627e-48 | -8.615850e-47 |
| Msa1054720 | Msa1389470 | 0.811265 | 7.633872e-51 | -8.615850e-47 |
| Msa1055260 | Msa1389470 | 0.814744 | 1.318038e-51 | -8.615850e-47 |
| Msa1055280 | Msa1389470 | 0.825089 | 5.667962e-54 | -8.615850e-47 |
| Msa1061180 | Msa1389470 | 0.842652 | 2.268192e-58 | -8.615850e-47 |
| Msa1067430 | Msa1389470 | 0.800183 | 1.624537e-48 | -8.615850e-47 |
| Msa1072080 | Msa1389470 | 0.829151 | 6.042815e-55 | -8.615850e-47 |
| Msa1073840 | Msa1389470 | 0.802401 | 5.710310e-49 | -8.615850e-47 |
| Msa1084490 | Msa1389470 | 0.814411 | 1.561993e-51 | -8.615850e-47 |
| Msa1089530 | Msa1389470 | 0.806629 | 7.496533e-50 | -8.615850e-47 |
| Msa1103670 | Msa1389470 | 0.825887 | 3.668408e-54 | -8.615850e-47 |
| Msa1106560 | Msa1389470 | 0.840188 | 1.010796e-57 | -8.615850e-47 |
| Msa0239660 | Msa1389470 | 0.845605 | 3.660320e-59 | -8.615850e-47 |
| Msa0247310 | Msa1389470 | 0.828097 | 1.086313e-54 | -8.615850e-47 |
| Msa0255990 | Msa1389470 | 0.812292 | 4.562360e-51 | -8.615850e-47 |
| Msa0257130 | Msa1389470 | 0.831189 | 1.922085e-55 | -8.615850e-47 |
| Msa0259560 | Msa1389470 | 0.805951 | 1.041906e-49 | -8.615850e-47 |
| Msa0259980 | Msa1389470 | 0.804906 | 1.725414e-49 | -8.615850e-47 |
| Msa0264350 | Msa1389470 | 0.812013 | 5.247476e-51 | -8.615850e-47 |
| Msa0267760 | Msa1389470 | 0.835475 | 1.642267e-56 | -8.615850e-47 |
| Msa0274780 | Msa1389470 | 0.809975 | 1.450761e-50 | -8.615850e-47 |
| Msa0277640 | Msa1389470 | 0.828604 | 8.197119e-55 | -8.615850e-47 |
| Msa0278620 | Msa1389470 | 0.803802 | 2.930296e-49 | -8.615850e-47 |
| Msa0284780 | Msa1389470 | 0.801662 | 8.101923e-49 | -8.615850e-47 |
| Msa0288380 | Msa1389470 | 0.813841 | 2.086485e-51 | -8.615850e-47 |
| Msa0298970 | Msa1389470 | 0.819894 | 9.137893e-53 | -8.615850e-47 |
| Msa0314790 | Msa1389470 | 0.800506 | 1.395804e-48 | -8.615850e-47 |
| Msa0315480 | Msa1389470 | 0.824554 | 7.581097e-54 | -8.615850e-47 |
| Msa0317260 | Msa1389470 | 0.807930 | 3.973055e-50 | -8.615850e-47 |
| Msa0318000 | Msa1389470 | 0.818847 | 1.583356e-52 | -8.615850e-47 |
| Msa0323990 | Msa1389470 | 0.801865 | 7.358425e-49 | -8.615850e-47 |
| Msa0339860 | Msa1389470 | 0.819764 | 9.786147e-53 | -8.615850e-47 |
| Msa0344580 | Msa1389470 | 0.804128 | 2.506958e-49 | -8.615850e-47 |
| Msa0358230 | Msa1389470 | 0.817988 | 2.477650e-52 | -8.615850e-47 |
| Msa1112610 | Msa1389470 | 0.823511 | 1.331862e-53 | -8.615850e-47 |
| Msa1125780 | Msa1389470 | 0.834804 | 2.424431e-56 | -8.615850e-47 |
| Msa1125950 | Msa1389470 | 0.840304 | 9.426082e-58 | -8.615850e-47 |
| Msa1129560 | Msa1389470 | 0.840619 | 7.795383e-58 | -8.615850e-47 |
| Msa1129720 | Msa1389470 | 0.835226 | 1.898570e-56 | -8.615850e-47 |
| Msa1147270 | Msa1389470 | 0.828286 | 9.779861e-55 | -8.615850e-47 |
| Msa1149760 | Msa1389470 | 0.846689 | 1.854493e-59 | -8.615850e-47 |
| Msa1154670 | Msa1389470 | 0.812509 | 4.090209e-51 | -8.615850e-47 |
| Msa1157160 | Msa1389470 | 0.828242 | 1.002337e-54 | -8.615850e-47 |
| Msa1159100 | Msa1389470 | 0.846483 | 2.111304e-59 | -8.615850e-47 |
| Msa1166180 | Msa1389470 | 0.829310 | 5.529757e-55 | -8.615850e-47 |
| Msa1166280 | Msa1389470 | 0.822384 | 2.438822e-53 | -8.615850e-47 |
| Msa1171340 | Msa1389470 | 0.834778 | 2.461908e-56 | -8.615850e-47 |
| Msa1175750 | Msa1389470 | 0.840615 | 7.815460e-58 | -8.615850e-47 |
| Msa1183390 | Msa1389470 | 0.824143 | 9.466585e-54 | -8.615850e-47 |
| Msa1190910 | Msa1389470 | 0.845528 | 3.840043e-59 | -8.615850e-47 |
| Msa1197110 | Msa1389470 | 0.851656 | 7.700020e-61 | -8.615850e-47 |
| Msa1200920 | Msa1389470 | 0.834722 | 2.542499e-56 | -8.615850e-47 |
| Msa1220450 | Msa1389470 | -0.820739 | 5.851040e-53 | -8.615850e-47 |
| Msa1220460 | Msa1389470 | -0.817204 | 3.722356e-52 | -8.615850e-47 |
| Msa1220480 | Msa1389470 | -0.816097 | 6.589758e-52 | -8.615850e-47 |
| Msa1221260 | Msa1389470 | 0.803292 | 3.737789e-49 | -8.615850e-47 |
| Msa1222360 | Msa1389470 | 0.814800 | 1.280806e-51 | -8.615850e-47 |
| Msa1222390 | Msa1389470 | 0.825977 | 3.491862e-54 | -8.615850e-47 |
| Msa1223840 | Msa1389470 | 0.842692 | 2.213587e-58 | -8.615850e-47 |
| Msa0490300 | Msa1389470 | 0.808337 | 3.254683e-50 | -8.615850e-47 |
| Msa0510230 | Msa1389470 | 0.816505 | 5.341541e-52 | -8.615850e-47 |
| Msa0518520 | Msa1389470 | 0.841142 | 5.684412e-58 | -8.615850e-47 |
| Msa0519200 | Msa1389470 | 0.821842 | 3.255763e-53 | -8.615850e-47 |
| Msa0524120 | Msa1389470 | 0.811261 | 7.648608e-51 | -8.615850e-47 |
| Msa0526700 | Msa1389470 | 0.841626 | 4.239074e-58 | -8.615850e-47 |
| Msa0526710 | Msa1389470 | 0.819061 | 1.415359e-52 | -8.615850e-47 |
| Msa0527590 | Msa1389470 | 0.808173 | 3.527966e-50 | -8.615850e-47 |
| Msa0527600 | Msa1389470 | 0.812540 | 4.026477e-51 | -8.615850e-47 |
| Msa0538570 | Msa1389470 | 0.840801 | 6.987734e-58 | -8.615850e-47 |
| Msa0546380 | Msa1389470 | 0.843243 | 1.579843e-58 | -8.615850e-47 |
| Msa0546740 | Msa1389470 | 0.830604 | 2.675213e-55 | -8.615850e-47 |
| Msa0547050 | Msa1389470 | 0.837875 | 4.015132e-57 | -8.615850e-47 |
| Msa0561510 | Msa1389470 | 0.819507 | 1.119792e-52 | -8.615850e-47 |
| Msa0563530 | Msa1389470 | 0.846775 | 1.756909e-59 | -8.615850e-47 |
| Msa0567290 | Msa1389470 | 0.802861 | 4.589511e-49 | -8.615850e-47 |
| Msa0575250 | Msa1389470 | 0.807082 | 6.013453e-50 | -8.615850e-47 |
| Msa0576420 | Msa1389470 | 0.836854 | 7.330074e-57 | -8.615850e-47 |
| Msa0577440 | Msa1389470 | 0.816325 | 5.862665e-52 | -8.615850e-47 |
| Msa0581340 | Msa1389470 | 0.804754 | 1.855765e-49 | -8.615850e-47 |
| Msa0581460 | Msa1389470 | 0.823204 | 1.570795e-53 | -8.615850e-47 |
| Msa0583940 | Msa1389470 | 0.800068 | 1.713972e-48 | -8.615850e-47 |
| Msa0594390 | Msa1389470 | 0.851137 | 1.079632e-60 | -8.615850e-47 |
| Msa0600390 | Msa1389470 | 0.838598 | 2.615525e-57 | -8.615850e-47 |
| Msa0843690 | Msa1389470 | 0.815424 | 9.309314e-52 | -8.615850e-47 |
| Msa0855020 | Msa1389470 | 0.801464 | 8.892279e-49 | -8.615850e-47 |
| Msa0890250 | Msa1389470 | 0.836567 | 8.675000e-57 | -8.615850e-47 |
| Msa0905550 | Msa1389470 | 0.801106 | 1.052976e-48 | -8.615850e-47 |
| Msa0907700 | Msa1389470 | 0.816028 | 6.830542e-52 | -8.615850e-47 |
| Msa0910400 | Msa1389470 | 0.810154 | 1.327499e-50 | -8.615850e-47 |
| Msa0922540 | Msa1389470 | 0.841955 | 3.470758e-58 | -8.615850e-47 |
| Msa0925160 | Msa1389470 | 0.862621 | 4.450102e-64 | -8.615850e-47 |
| Msa0925730 | Msa1389470 | 0.809813 | 1.571727e-50 | -8.615850e-47 |
| Msa0930330 | Msa1389470 | 0.812741 | 3.639057e-51 | -8.615850e-47 |
| Msa0931480 | Msa1389470 | 0.831416 | 1.690263e-55 | -8.615850e-47 |
| Msa0931610 | Msa1389470 | 0.800221 | 1.595746e-48 | -8.615850e-47 |
| Msa0937550 | Msa1389470 | 0.816264 | 6.047765e-52 | -8.615850e-47 |
| Msa0937940 | Msa1389470 | 0.807654 | 4.547303e-50 | -8.615850e-47 |
| Msa0944510 | Msa1389470 | 0.821574 | 3.755106e-53 | -8.615850e-47 |
| Msa0951460 | Msa1389470 | 0.815205 | 1.041806e-51 | -8.615850e-47 |
| Msa0951960 | Msa1389470 | 0.809437 | 1.892886e-50 | -8.615850e-47 |
| Msa0955260 | Msa1389470 | 0.838252 | 3.211545e-57 | -8.615850e-47 |
| Msa0958020 | Msa1389470 | 0.830689 | 2.548965e-55 | -8.615850e-47 |
| Msa0965960 | Msa1389470 | 0.800621 | 1.322482e-48 | -8.615850e-47 |
| Msa0972730 | Msa1389470 | 0.844197 | 8.777291e-59 | -8.615850e-47 |
| Msa0974750 | Msa1389470 | 0.810661 | 1.031846e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389470 | MtrunA17_Chr1g0213971 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 7.21e-150 | 416 |
| Msa1389470 | MtrunA17_Chr1g0193711 | 63.978 | 186 | 63 | 2 | 41 | 225 | 67 | 249 | 3.82e-83 | 248 |
| Msa1389470 | MtrunA17_Chr7g0270991 | 63.492 | 189 | 64 | 2 | 37 | 225 | 76 | 259 | 5.58e-83 | 248 |
| Msa1389470 | MtrunA17_Chr3g0104751 | 60.989 | 182 | 60 | 3 | 51 | 225 | 26 | 203 | 5.13e-71 | 215 |
| Msa1389470 | MtrunA17_Chr3g0145501 | 59.649 | 171 | 58 | 3 | 60 | 223 | 13 | 179 | 6.32e-66 | 202 |
| Msa1389470 | MtrunA17_Chr3g0113441 | 60.345 | 174 | 58 | 3 | 57 | 223 | 62 | 231 | 7.18e-65 | 201 |
| Msa1389470 | MtrunA17_Chr7g0274841 | 57.895 | 171 | 61 | 3 | 60 | 223 | 5 | 171 | 1.79e-64 | 197 |
| Msa1389470 | MtrunA17_Chr4g0038431 | 59.195 | 174 | 60 | 3 | 57 | 223 | 2 | 171 | 2.36e-64 | 197 |
| Msa1389470 | MtrunA17_Chr8g0374621 | 55.814 | 172 | 65 | 2 | 60 | 223 | 5 | 173 | 5.23e-58 | 187 |
| Msa1389470 | MtrunA17_Chr8g0353571 | 54.438 | 169 | 68 | 3 | 61 | 223 | 20 | 185 | 2.67e-56 | 177 |
| Msa1389470 | MtrunA17_Chr4g0037281 | 50.829 | 181 | 80 | 2 | 51 | 224 | 38 | 216 | 2.89e-56 | 178 |
| Msa1389470 | MtrunA17_Chr4g0045321 | 53.757 | 173 | 69 | 2 | 60 | 224 | 5 | 174 | 4.04e-56 | 182 |
| Msa1389470 | MtrunA17_Chr7g0260441 | 55.172 | 174 | 66 | 3 | 61 | 226 | 9 | 178 | 1.27e-53 | 182 |
| Msa1389470 | MtrunA17_Chr2g0321111 | 52.778 | 144 | 63 | 3 | 75 | 217 | 470 | 609 | 1.52e-40 | 146 |
| Msa1389470 | MtrunA17_Chr7g0266721 | 47.917 | 144 | 70 | 4 | 75 | 217 | 18 | 157 | 8.19e-37 | 127 |
| Msa1389470 | MtrunA17_Chr3g0138061 | 44.444 | 171 | 83 | 3 | 61 | 223 | 12 | 178 | 4.11e-35 | 131 |
| Msa1389470 | MtrunA17_Chr8g0351571 | 47.945 | 146 | 69 | 4 | 75 | 218 | 9 | 149 | 4.98e-34 | 119 |
| Msa1389470 | MtrunA17_Chr1g0149061 | 46.000 | 150 | 67 | 4 | 61 | 201 | 9 | 153 | 2.23e-31 | 120 |
| Msa1389470 | MtrunA17_Chr3g0122871 | 53.333 | 120 | 28 | 3 | 119 | 211 | 1 | 119 | 6.47e-31 | 110 |
| Msa1389470 | MtrunA17_Chr5g0401141 | 46.528 | 144 | 72 | 4 | 76 | 218 | 354 | 493 | 7.53e-31 | 119 |
| Msa1389470 | MtrunA17_Chr6g0484281 | 39.474 | 152 | 79 | 5 | 75 | 217 | 9 | 156 | 7.17e-20 | 87.8 |
| Msa1389470 | MtrunA17_Chr2g0288371 | 42.143 | 140 | 74 | 6 | 76 | 212 | 22 | 157 | 1.14e-19 | 87.0 |
| Msa1389470 | MtrunA17_Chr8g0357591 | 38.816 | 152 | 80 | 5 | 75 | 217 | 9 | 156 | 1.40e-18 | 84.0 |
| Msa1389470 | MtrunA17_Chr2g0305071 | 29.293 | 198 | 95 | 8 | 74 | 226 | 90 | 287 | 3.59e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389470 | AT5G13120.2 | 78.977 | 176 | 37 | 0 | 51 | 226 | 78 | 253 | 3.10e-107 | 309 |
| Msa1389470 | AT5G13120.1 | 78.977 | 176 | 37 | 0 | 51 | 226 | 82 | 257 | 4.53e-107 | 309 |
| Msa1389470 | AT3G62030.1 | 66.129 | 186 | 60 | 1 | 40 | 225 | 76 | 258 | 7.70e-86 | 255 |
| Msa1389470 | AT3G62030.2 | 66.129 | 186 | 60 | 1 | 40 | 225 | 129 | 311 | 4.20e-85 | 255 |
| Msa1389470 | AT3G62030.3 | 68.391 | 174 | 52 | 1 | 52 | 225 | 87 | 257 | 8.88e-85 | 253 |
| Msa1389470 | AT5G58710.1 | 58.201 | 189 | 68 | 3 | 44 | 225 | 20 | 204 | 1.77e-70 | 214 |
| Msa1389470 | AT2G29960.1 | 58.201 | 189 | 68 | 3 | 44 | 225 | 17 | 201 | 2.71e-70 | 214 |
| Msa1389470 | AT2G29960.3 | 58.201 | 189 | 68 | 3 | 44 | 225 | 17 | 201 | 2.71e-70 | 214 |
| Msa1389470 | AT2G21130.1 | 60.819 | 171 | 56 | 3 | 60 | 223 | 6 | 172 | 6.12e-68 | 207 |
| Msa1389470 | AT2G16600.1 | 60.234 | 171 | 57 | 3 | 60 | 223 | 6 | 172 | 7.14e-67 | 204 |
| Msa1389470 | AT4G38740.1 | 59.064 | 171 | 59 | 3 | 60 | 223 | 5 | 171 | 1.29e-65 | 201 |
| Msa1389470 | AT3G56070.1 | 57.310 | 171 | 62 | 3 | 60 | 223 | 5 | 171 | 5.60e-64 | 197 |
| Msa1389470 | AT3G56070.2 | 57.310 | 171 | 62 | 3 | 60 | 223 | 5 | 171 | 5.60e-64 | 197 |
| Msa1389470 | AT3G55920.1 | 56.044 | 182 | 67 | 4 | 52 | 225 | 52 | 228 | 1.56e-62 | 195 |
| Msa1389470 | AT2G29960.2 | 55.026 | 189 | 64 | 4 | 44 | 225 | 17 | 191 | 2.28e-62 | 193 |
| Msa1389470 | AT4G34870.1 | 58.480 | 171 | 60 | 3 | 60 | 223 | 5 | 171 | 3.24e-62 | 192 |
| Msa1389470 | AT2G15790.1 | 56.069 | 173 | 65 | 2 | 60 | 224 | 5 | 174 | 1.60e-56 | 184 |
| Msa1389470 | AT2G38730.1 | 54.438 | 169 | 68 | 3 | 61 | 223 | 34 | 199 | 3.61e-56 | 177 |
| Msa1389470 | AT2G16600.2 | 55.488 | 164 | 54 | 3 | 60 | 223 | 6 | 150 | 8.11e-56 | 175 |
| Msa1389470 | AT4G34960.1 | 49.744 | 195 | 83 | 3 | 42 | 224 | 25 | 216 | 4.60e-55 | 176 |
| Msa1389470 | AT3G63400.2 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 7.91e-54 | 177 |
| Msa1389470 | AT3G63400.3 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1389470 | AT3G63400.4 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1389470 | AT3G63400.1 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1389470 | AT3G44600.1 | 52.778 | 144 | 63 | 3 | 75 | 217 | 484 | 623 | 1.15e-40 | 147 |
| Msa1389470 | AT4G34960.2 | 50.667 | 150 | 59 | 3 | 42 | 179 | 25 | 171 | 2.37e-40 | 136 |
| Msa1389470 | AT2G36130.1 | 46.528 | 144 | 72 | 4 | 75 | 217 | 18 | 157 | 1.32e-37 | 129 |
| Msa1389470 | AT1G01940.1 | 46.897 | 145 | 72 | 4 | 75 | 218 | 9 | 149 | 2.14e-35 | 123 |
| Msa1389470 | AT3G22920.1 | 44.828 | 174 | 75 | 7 | 60 | 223 | 5 | 167 | 5.51e-32 | 117 |
| Msa1389470 | AT5G67530.1 | 46.154 | 143 | 72 | 4 | 76 | 217 | 353 | 491 | 1.77e-31 | 121 |
| Msa1389470 | AT4G32420.1 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1389470 | AT4G32420.5 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1389470 | AT4G32420.3 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1389470 | AT4G32420.6 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1389470 | AT4G32420.4 | 41.935 | 155 | 77 | 3 | 56 | 201 | 4 | 154 | 3.59e-26 | 106 |
| Msa1389470 | AT1G53720.2 | 39.474 | 152 | 79 | 5 | 75 | 217 | 9 | 156 | 1.03e-22 | 94.7 |
| Msa1389470 | AT4G33060.1 | 43.262 | 141 | 71 | 7 | 76 | 212 | 22 | 157 | 3.48e-22 | 94.7 |
| Msa1389470 | AT1G53720.1 | 40.132 | 152 | 78 | 5 | 75 | 217 | 9 | 156 | 7.59e-22 | 93.6 |
| Msa1389470 | AT2G47320.1 | 32.653 | 147 | 82 | 6 | 76 | 217 | 87 | 221 | 7.87e-11 | 60.5 |
Find 82 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGATTGTCACCTTCTTT+AGG | 0.241303 | tig0021283:-60104 | None:intergenic |
| GATCAGAGGCATGTTGTATT+TGG | 0.249985 | tig0021283:+60012 | Msa1389470:CDS |
| ACTGATTGTCACCTTCTTTA+GGG | 0.273487 | tig0021283:-60103 | None:intergenic |
| TGGAAGGCATGGACATTGTT+AGG | 0.314434 | tig0021283:+60043 | Msa1389470:CDS |
| TAGGTCCTAGTATGAAAATA+AGG | 0.319359 | tig0021283:-60262 | None:intergenic |
| CAAGGAGGAGACTTTGATAA+AGG | 0.345816 | tig0021283:+59481 | Msa1389470:CDS |
| TGTTGTATTTGGCCAAGTTT+TGG | 0.352436 | tig0021283:+60023 | Msa1389470:CDS |
| AATAGTTGGTAAAAGTTTGT+AGG | 0.370817 | tig0021283:-60281 | None:intergenic |
| TCCACCAGTGAGAAGGGCTT+TGG | 0.372862 | tig0021283:+59412 | Msa1389470:CDS |
| CCAACTATTTGTATTCTAGT+AGG | 0.384001 | tig0021283:+60295 | Msa1389470:three_prime_UTR |
| ATCTATCTATCGCAGGGAAC+TGG | 0.385423 | tig0021283:+59581 | Msa1389470:intron |
| AACAAAACATGTCAAGCAAT+TGG | 0.393584 | tig0021283:-60141 | None:intergenic |
| CTTCCAACCAGCTTCCCAAC+TGG | 0.403156 | tig0021283:-59328 | None:intergenic |
| AGTAGGAATTAGTATCGTAT+TGG | 0.409412 | tig0021283:+60312 | Msa1389470:three_prime_UTR |
| GCATCTCCGTCGGGGTGGTT+AGG | 0.409454 | tig0021283:+59158 | Msa1389470:CDS |
| GGAAGTTCTCAACAGTTTGC+GGG | 0.417261 | tig0021283:-59381 | None:intergenic |
| TTCTTTGTTTCTTGCTGCTG+AGG | 0.427286 | tig0021283:+60176 | Msa1389470:three_prime_UTR |
| AAAGTGAGGGCTGTGGAAAA+TGG | 0.427415 | tig0021283:+59229 | Msa1389470:CDS |
| GTATTCTTTGATGTTAGTAT+TGG | 0.430298 | tig0021283:+59301 | Msa1389470:CDS |
| AACTGACTCCCATTGGTGTT+GGG | 0.430322 | tig0021283:-59874 | None:intergenic |
| GGTGGTTAGGTCCCGAGGTG+TGG | 0.434983 | tig0021283:+59171 | Msa1389470:CDS |
| AGGATTGTGATAGGACTCTT+TGG | 0.436041 | tig0021283:+59349 | Msa1389470:CDS |
| GCCCTTCTCACTGGTGGAAA+GGG | 0.436297 | tig0021283:-59407 | None:intergenic |
| GTAGGAATTAGTATCGTATT+GGG | 0.442760 | tig0021283:+60313 | Msa1389470:three_prime_UTR |
| GTGGTTAGGTCCCGAGGTGT+GGG | 0.453738 | tig0021283:+59172 | Msa1389470:CDS |
| TGGAAATCCAGTTGGGAAGC+TGG | 0.456366 | tig0021283:+59321 | Msa1389470:CDS |
| TGCCCTTTCCACCAGTGAGA+AGG | 0.468665 | tig0021283:+59405 | Msa1389470:CDS |
| CTAAAAGAAGCATCTCCGTC+GGG | 0.471283 | tig0021283:+59149 | Msa1389470:CDS |
| TGTCCATGCCTTCCAAAACT+TGG | 0.486542 | tig0021283:-60035 | None:intergenic |
| ACTGGAGGCAAAAGTATCTC+TGG | 0.489609 | tig0021283:+59599 | Msa1389470:CDS |
| AGCCCTTCTCACTGGTGGAA+AGG | 0.493291 | tig0021283:-59408 | None:intergenic |
| ATCAAGGACTTCATGATTCA+AGG | 0.494593 | tig0021283:+59463 | Msa1389470:CDS |
| ACATTGGCAGACGCTGTGGC+TGG | 0.505086 | tig0021283:+59990 | Msa1389470:intron |
| GCCCTTTCCACCAGTGAGAA+GGG | 0.506529 | tig0021283:+59406 | Msa1389470:CDS |
| CATGCTAACAGCTCCTGGTC+CGG | 0.506814 | tig0021283:-59839 | None:intergenic |
| CTAGTGTCTCATACCGGACC+AGG | 0.507400 | tig0021283:+59826 | Msa1389470:intron |
| ATGCTGGTCCCAACACCAAT+GGG | 0.515041 | tig0021283:+59866 | Msa1389470:CDS |
| CACCTTCCATCGCGTCATCA+AGG | 0.515078 | tig0021283:+59447 | Msa1389470:CDS |
| GTTAGTATTGGAAATCCAGT+TGG | 0.515418 | tig0021283:+59313 | Msa1389470:CDS |
| TGTTAGGTCGATTGAATCAC+GGG | 0.517014 | tig0021283:+60059 | Msa1389470:CDS |
| AGGTCCTAGTATGAAAATAA+GGG | 0.519396 | tig0021283:-60261 | None:intergenic |
| CCTACTAGAATACAAATAGT+TGG | 0.525592 | tig0021283:-60295 | None:intergenic |
| CTGATTGTCACCTTCTTTAG+GGG | 0.526723 | tig0021283:-60102 | None:intergenic |
| CGGAAGTTCTCAACAGTTTG+CGG | 0.530427 | tig0021283:-59382 | None:intergenic |
| TTTGCCATGCTAACAGCTCC+TGG | 0.534982 | tig0021283:-59844 | None:intergenic |
| GCTGTTAGCATGGCAAATGC+TGG | 0.538859 | tig0021283:+59850 | Msa1389470:CDS |
| TAGTTTCACACCCACACCTC+GGG | 0.541866 | tig0021283:-59182 | None:intergenic |
| AATGCTGGTCCCAACACCAA+TGG | 0.549301 | tig0021283:+59865 | Msa1389470:CDS |
| GCCAAAGCCCTTCTCACTGG+TGG | 0.549951 | tig0021283:-59413 | None:intergenic |
| GTAGCCAAAGCCCTTCTCAC+TGG | 0.550204 | tig0021283:-59416 | None:intergenic |
| CAGTTGGGAAGCTGGTTGGA+AGG | 0.554098 | tig0021283:+59329 | Msa1389470:CDS |
| TTAGTATTGGAAATCCAGTT+GGG | 0.555401 | tig0021283:+59314 | Msa1389470:CDS |
| CTTGATGACGCGATGGAAGG+TGG | 0.555450 | tig0021283:-59446 | None:intergenic |
| CTGGTTGGAAGGATTGTGAT+AGG | 0.560590 | tig0021283:+59340 | Msa1389470:CDS |
| AAACTGACTCCCATTGGTGT+TGG | 0.561474 | tig0021283:-59875 | None:intergenic |
| TGGTGATCGTCCCCTAAAGA+AGG | 0.561937 | tig0021283:+60092 | Msa1389470:CDS |
| AATCCAGTTGGGAAGCTGGT+TGG | 0.562899 | tig0021283:+59325 | Msa1389470:CDS |
| AGACGCTGTGGCTGGATCAG+AGG | 0.565181 | tig0021283:+59998 | Msa1389470:intron |
| GTCGGGGTGGTTAGGTCCCG+AGG | 0.565995 | tig0021283:+59166 | Msa1389470:CDS |
| TTGTTAGGTCGATTGAATCA+CGG | 0.592054 | tig0021283:+60058 | Msa1389470:CDS |
| TCTCACTGGTGGAAAGGGCA+CGG | 0.601235 | tig0021283:-59402 | None:intergenic |
| CGGACCAGGAGCTGTTAGCA+TGG | 0.603520 | tig0021283:+59840 | Msa1389470:CDS |
| CCTAAAAGAAGCATCTCCGT+CGG | 0.606730 | tig0021283:+59148 | Msa1389470:CDS |
| ACAAGTGAAAGTGAGGGCTG+TGG | 0.614839 | tig0021283:+59222 | Msa1389470:CDS |
| CATGACATTGGCAGACGCTG+TGG | 0.616067 | tig0021283:+59986 | Msa1389470:intron |
| CTAGTTTCACACCCACACCT+CGG | 0.617486 | tig0021283:-59183 | None:intergenic |
| TACGACGACAAGTGAAAGTG+AGG | 0.618754 | tig0021283:+59215 | Msa1389470:CDS |
| GTCCTTGATGACGCGATGGA+AGG | 0.624852 | tig0021283:-59449 | None:intergenic |
| ATATCTCTAGTGTCTCATAC+CGG | 0.626152 | tig0021283:+59820 | Msa1389470:intron |
| TGAAGTCCTTGATGACGCGA+TGG | 0.626809 | tig0021283:-59453 | None:intergenic |
| GATGACGCGATGGAAGGTGG+AGG | 0.631465 | tig0021283:-59443 | None:intergenic |
| GTGGGTGTGAAACTAGCAGT+AGG | 0.631670 | tig0021283:+59190 | Msa1389470:CDS |
| TATCTATCGCAGGGAACTGG+AGG | 0.635120 | tig0021283:+59584 | Msa1389470:intron |
| GGAAAATGGTAGTAGTTCAG+AGG | 0.650163 | tig0021283:+59243 | Msa1389470:CDS |
| GAATCACGGGAGACTGATCG+TGG | 0.651487 | tig0021283:+60072 | Msa1389470:CDS |
| TCGGGACCTAACCACCCCGA+CGG | 0.658560 | tig0021283:-59164 | None:intergenic |
| AAGAAGCATCTCCGTCGGGG+TGG | 0.659605 | tig0021283:+59153 | Msa1389470:CDS |
| TCCTAGTATGAAAATAAGGG+AGG | 0.672935 | tig0021283:-60258 | None:intergenic |
| AAGGTGACAATCAGTGACTG+TGG | 0.689468 | tig0021283:+60111 | Msa1389470:CDS |
| TAAAAGAAGCATCTCCGTCG+GGG | 0.693386 | tig0021283:+59150 | Msa1389470:CDS |
| ACGACGACAAGTGAAAGTGA+GGG | 0.705755 | tig0021283:+59216 | Msa1389470:CDS |
| AAGGACTTCATGATTCAAGG+AGG | 0.745105 | tig0021283:+59466 | Msa1389470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCAATTAAATTTAAGTAA+TGG | - | tig0021283:59047-59066 | None:intergenic | 15.0% |
| !!! | ATAAGTTGATGAATAAAAAA+AGG | - | tig0021283:59543-59562 | None:intergenic | 15.0% |
| !! | CATCAATTAAATTTAAGTAA+TGG | - | tig0021283:59047-59066 | None:intergenic | 15.0% |
| !!! | ATAAGTTGATGAATAAAAAA+AGG | - | tig0021283:59543-59562 | None:intergenic | 15.0% |
| !! | TATTAATTGATTGATTGTCT+TGG | + | tig0021283:59080-59099 | Msa1389470:intron | 20.0% |
| !! | AATAAAATAAACACAGTGAA+GGG | - | tig0021283:59722-59741 | None:intergenic | 20.0% |
| !! | AAATAAAATAAACACAGTGA+AGG | - | tig0021283:59723-59742 | None:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | + | tig0021283:59744-59763 | Msa1389470:intron | 20.0% |
| !! | TATTAATTGATTGATTGTCT+TGG | + | tig0021283:59080-59099 | Msa1389470:intron | 20.0% |
| !! | AATAAAATAAACACAGTGAA+GGG | - | tig0021283:59722-59741 | None:intergenic | 20.0% |
| !! | AAATAAAATAAACACAGTGA+AGG | - | tig0021283:59723-59742 | None:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | + | tig0021283:59744-59763 | Msa1389470:intron | 20.0% |
| !!! | TTGAGTTGAATAGATAGATT+AGG | + | tig0021283:58854-58873 | Msa1389470:intron | 25.0% |
| ! | TATATTATCAGTGAGAAAAG+TGG | - | tig0021283:58988-59007 | None:intergenic | 25.0% |
| ! | GTATTCTTTGATGTTAGTAT+TGG | + | tig0021283:59301-59320 | Msa1389470:CDS | 25.0% |
| !! | GTTGATGAATAAAAAAAGGA+AGG | - | tig0021283:59539-59558 | None:intergenic | 25.0% |
| ! | ATAAAATAAACACAGTGAAG+GGG | - | tig0021283:59721-59740 | None:intergenic | 25.0% |
| ! | ATTCTTCTATTCTCTCTTAT+CGG | + | tig0021283:59922-59941 | Msa1389470:intron | 25.0% |
| !!! | AATAGTTGGTAAAAGTTTGT+AGG | - | tig0021283:60284-60303 | None:intergenic | 25.0% |
| !!! | TTGAGTTGAATAGATAGATT+AGG | + | tig0021283:58854-58873 | Msa1389470:intron | 25.0% |
| ! | TATATTATCAGTGAGAAAAG+TGG | - | tig0021283:58988-59007 | None:intergenic | 25.0% |
| ! | GTATTCTTTGATGTTAGTAT+TGG | + | tig0021283:59301-59320 | Msa1389470:CDS | 25.0% |
| !! | GTTGATGAATAAAAAAAGGA+AGG | - | tig0021283:59539-59558 | None:intergenic | 25.0% |
| ! | ATAAAATAAACACAGTGAAG+GGG | - | tig0021283:59721-59740 | None:intergenic | 25.0% |
| ! | ATTCTTCTATTCTCTCTTAT+CGG | + | tig0021283:59922-59941 | Msa1389470:intron | 25.0% |
| !!! | AATAGTTGGTAAAAGTTTGT+AGG | - | tig0021283:60284-60303 | None:intergenic | 25.0% |
| AATTGATTGATTGTCTTGGT+TGG | + | tig0021283:59084-59103 | Msa1389470:intron | 30.0% | |
| ATTGATTGATTGTCTTGGTT+GGG | + | tig0021283:59085-59104 | Msa1389470:intron | 30.0% | |
| ! | TTAGTATTGGAAATCCAGTT+GGG | + | tig0021283:59314-59333 | Msa1389470:CDS | 30.0% |
| TAAAATAAACACAGTGAAGG+GGG | - | tig0021283:59720-59739 | None:intergenic | 30.0% | |
| ACTTAATTGTCTCATGACAT+TGG | + | tig0021283:59974-59993 | Msa1389470:intron | 30.0% | |
| AACAAAACATGTCAAGCAAT+TGG | - | tig0021283:60144-60163 | None:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | tig0021283:60150-60169 | Msa1389470:exon | 30.0% |
| CAAACAAAAAATTGAGAGAG+CGG | - | tig0021283:60216-60235 | None:intergenic | 30.0% | |
| AGGTCCTAGTATGAAAATAA+GGG | - | tig0021283:60264-60283 | None:intergenic | 30.0% | |
| TAGGTCCTAGTATGAAAATA+AGG | - | tig0021283:60265-60284 | None:intergenic | 30.0% | |
| CCTACTAGAATACAAATAGT+TGG | - | tig0021283:60298-60317 | None:intergenic | 30.0% | |
| CCAACTATTTGTATTCTAGT+AGG | + | tig0021283:60295-60314 | Msa1389470:three_prime_UTR | 30.0% | |
| AGTAGGAATTAGTATCGTAT+TGG | + | tig0021283:60312-60331 | Msa1389470:three_prime_UTR | 30.0% | |
| GTAGGAATTAGTATCGTATT+GGG | + | tig0021283:60313-60332 | Msa1389470:three_prime_UTR | 30.0% | |
| AATTGATTGATTGTCTTGGT+TGG | + | tig0021283:59084-59103 | Msa1389470:intron | 30.0% | |
| ATTGATTGATTGTCTTGGTT+GGG | + | tig0021283:59085-59104 | Msa1389470:intron | 30.0% | |
| ! | TTAGTATTGGAAATCCAGTT+GGG | + | tig0021283:59314-59333 | Msa1389470:CDS | 30.0% |
| TAAAATAAACACAGTGAAGG+GGG | - | tig0021283:59720-59739 | None:intergenic | 30.0% | |
| ACTTAATTGTCTCATGACAT+TGG | + | tig0021283:59974-59993 | Msa1389470:intron | 30.0% | |
| AACAAAACATGTCAAGCAAT+TGG | - | tig0021283:60144-60163 | None:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | tig0021283:60150-60169 | Msa1389470:exon | 30.0% |
| CAAACAAAAAATTGAGAGAG+CGG | - | tig0021283:60216-60235 | None:intergenic | 30.0% | |
| AGGTCCTAGTATGAAAATAA+GGG | - | tig0021283:60264-60283 | None:intergenic | 30.0% | |
| TAGGTCCTAGTATGAAAATA+AGG | - | tig0021283:60265-60284 | None:intergenic | 30.0% | |
| CCTACTAGAATACAAATAGT+TGG | - | tig0021283:60298-60317 | None:intergenic | 30.0% | |
| CCAACTATTTGTATTCTAGT+AGG | + | tig0021283:60295-60314 | Msa1389470:three_prime_UTR | 30.0% | |
| AGTAGGAATTAGTATCGTAT+TGG | + | tig0021283:60312-60331 | Msa1389470:three_prime_UTR | 30.0% | |
| TCTATTCAACTCAAACCCAA+AGG | - | tig0021283:58848-58867 | None:intergenic | 35.0% | |
| ATTATCAGTGAGAAAAGTGG+CGG | - | tig0021283:58985-59004 | None:intergenic | 35.0% | |
| !!! | CTTCTTTTAGGGTTAGGATT+AGG | - | tig0021283:59139-59158 | None:intergenic | 35.0% |
| ! | GTTAGTATTGGAAATCCAGT+TGG | + | tig0021283:59313-59332 | Msa1389470:CDS | 35.0% |
| ATCAAGGACTTCATGATTCA+AGG | + | tig0021283:59463-59482 | Msa1389470:CDS | 35.0% | |
| TCTATCTATCTATCTATCGC+AGG | + | tig0021283:59574-59593 | Msa1389470:intron | 35.0% | |
| CTATCTATCTATCTATCGCA+GGG | + | tig0021283:59575-59594 | Msa1389470:intron | 35.0% | |
| ATATCTCTAGTGTCTCATAC+CGG | + | tig0021283:59820-59839 | Msa1389470:intron | 35.0% | |
| ! | TATGAAAAACTGACTCCCAT+TGG | - | tig0021283:59884-59903 | None:intergenic | 35.0% |
| ! | TGTTGTATTTGGCCAAGTTT+TGG | + | tig0021283:60023-60042 | Msa1389470:CDS | 35.0% |
| TTGTTAGGTCGATTGAATCA+CGG | + | tig0021283:60058-60077 | Msa1389470:CDS | 35.0% | |
| ACTGATTGTCACCTTCTTTA+GGG | - | tig0021283:60106-60125 | None:intergenic | 35.0% | |
| !!! | ACCTCCCTTATTTTCATACT+AGG | + | tig0021283:60257-60276 | Msa1389470:three_prime_UTR | 35.0% |
| TCCTAGTATGAAAATAAGGG+AGG | - | tig0021283:60261-60280 | None:intergenic | 35.0% | |
| TCTATTCAACTCAAACCCAA+AGG | - | tig0021283:58848-58867 | None:intergenic | 35.0% | |
| ATTATCAGTGAGAAAAGTGG+CGG | - | tig0021283:58985-59004 | None:intergenic | 35.0% | |
| !!! | CTTCTTTTAGGGTTAGGATT+AGG | - | tig0021283:59139-59158 | None:intergenic | 35.0% |
| ! | GTTAGTATTGGAAATCCAGT+TGG | + | tig0021283:59313-59332 | Msa1389470:CDS | 35.0% |
| ATCAAGGACTTCATGATTCA+AGG | + | tig0021283:59463-59482 | Msa1389470:CDS | 35.0% | |
| TCTATCTATCTATCTATCGC+AGG | + | tig0021283:59574-59593 | Msa1389470:intron | 35.0% | |
| CTATCTATCTATCTATCGCA+GGG | + | tig0021283:59575-59594 | Msa1389470:intron | 35.0% | |
| ATATCTCTAGTGTCTCATAC+CGG | + | tig0021283:59820-59839 | Msa1389470:intron | 35.0% | |
| ! | TATGAAAAACTGACTCCCAT+TGG | - | tig0021283:59884-59903 | None:intergenic | 35.0% |
| ! | TGTTGTATTTGGCCAAGTTT+TGG | + | tig0021283:60023-60042 | Msa1389470:CDS | 35.0% |
| TTGTTAGGTCGATTGAATCA+CGG | + | tig0021283:60058-60077 | Msa1389470:CDS | 35.0% | |
| ACTGATTGTCACCTTCTTTA+GGG | - | tig0021283:60106-60125 | None:intergenic | 35.0% | |
| !!! | ACCTCCCTTATTTTCATACT+AGG | + | tig0021283:60257-60276 | Msa1389470:three_prime_UTR | 35.0% |
| TCCTAGTATGAAAATAAGGG+AGG | - | tig0021283:60261-60280 | None:intergenic | 35.0% | |
| TTCAACTCAAACCCAAAGGA+TGG | - | tig0021283:58844-58863 | None:intergenic | 40.0% | |
| ATCCTTCCTTCCTTCTTCTT+CGG | + | tig0021283:58912-58931 | Msa1389470:intron | 40.0% | |
| !!! | GAGATGCTTCTTTTAGGGTT+AGG | - | tig0021283:59145-59164 | None:intergenic | 40.0% |
| GGAAAATGGTAGTAGTTCAG+AGG | + | tig0021283:59243-59262 | Msa1389470:CDS | 40.0% | |
| AGGATTGTGATAGGACTCTT+TGG | + | tig0021283:59349-59368 | Msa1389470:CDS | 40.0% | |
| AAGGACTTCATGATTCAAGG+AGG | + | tig0021283:59466-59485 | Msa1389470:CDS | 40.0% | |
| CAAGGAGGAGACTTTGATAA+AGG | + | tig0021283:59481-59500 | Msa1389470:CDS | 40.0% | |
| ! | GTTTTTCATATGCGCTGTCA+AGG | + | tig0021283:59894-59913 | Msa1389470:CDS | 40.0% |
| ! | GATCAGAGGCATGTTGTATT+TGG | + | tig0021283:60012-60031 | Msa1389470:CDS | 40.0% |
| !!! | GTATTTGGCCAAGTTTTGGA+AGG | + | tig0021283:60027-60046 | Msa1389470:CDS | 40.0% |
| TGTTAGGTCGATTGAATCAC+GGG | + | tig0021283:60059-60078 | Msa1389470:CDS | 40.0% | |
| CTGATTGTCACCTTCTTTAG+GGG | - | tig0021283:60105-60124 | None:intergenic | 40.0% | |
| ! | CACTGATTGTCACCTTCTTT+AGG | - | tig0021283:60107-60126 | None:intergenic | 40.0% |
| ! | TTCTTTGTTTCTTGCTGCTG+AGG | + | tig0021283:60176-60195 | Msa1389470:three_prime_UTR | 40.0% |
| TTCAACTCAAACCCAAAGGA+TGG | - | tig0021283:58844-58863 | None:intergenic | 40.0% | |
| ATCCTTCCTTCCTTCTTCTT+CGG | + | tig0021283:58912-58931 | Msa1389470:intron | 40.0% | |
| !!! | GAGATGCTTCTTTTAGGGTT+AGG | - | tig0021283:59145-59164 | None:intergenic | 40.0% |
| GGAAAATGGTAGTAGTTCAG+AGG | + | tig0021283:59243-59262 | Msa1389470:CDS | 40.0% | |
| AGGATTGTGATAGGACTCTT+TGG | + | tig0021283:59349-59368 | Msa1389470:CDS | 40.0% | |
| AAGGACTTCATGATTCAAGG+AGG | + | tig0021283:59466-59485 | Msa1389470:CDS | 40.0% | |
| CAAGGAGGAGACTTTGATAA+AGG | + | tig0021283:59481-59500 | Msa1389470:CDS | 40.0% | |
| ! | GTTTTTCATATGCGCTGTCA+AGG | + | tig0021283:59894-59913 | Msa1389470:CDS | 40.0% |
| ! | GATCAGAGGCATGTTGTATT+TGG | + | tig0021283:60012-60031 | Msa1389470:CDS | 40.0% |
| !!! | GTATTTGGCCAAGTTTTGGA+AGG | + | tig0021283:60027-60046 | Msa1389470:CDS | 40.0% |
| TGTTAGGTCGATTGAATCAC+GGG | + | tig0021283:60059-60078 | Msa1389470:CDS | 40.0% | |
| CTGATTGTCACCTTCTTTAG+GGG | - | tig0021283:60105-60124 | None:intergenic | 40.0% | |
| ! | CACTGATTGTCACCTTCTTT+AGG | - | tig0021283:60107-60126 | None:intergenic | 40.0% |
| ! | TTCTTTGTTTCTTGCTGCTG+AGG | + | tig0021283:60176-60195 | Msa1389470:three_prime_UTR | 40.0% |
| ! | ATGGTGGTGAATCCATCCTT+TGG | + | tig0021283:58829-58848 | Msa1389470:intron | 45.0% |
| ! | TGGTGGTGAATCCATCCTTT+GGG | + | tig0021283:58830-58849 | Msa1389470:intron | 45.0% |
| TCAACACCGAAGAAGAAGGA+AGG | - | tig0021283:58921-58940 | None:intergenic | 45.0% | |
| TGGTTCAACACCGAAGAAGA+AGG | - | tig0021283:58925-58944 | None:intergenic | 45.0% | |
| TTGAATGCAGCAACAGCCAT+CGG | - | tig0021283:58949-58968 | None:intergenic | 45.0% | |
| GATTGATTGTCTTGGTTGGG+TGG | + | tig0021283:59088-59107 | Msa1389470:intron | 45.0% | |
| ! | CGACGGAGATGCTTCTTTTA+GGG | - | tig0021283:59150-59169 | None:intergenic | 45.0% |
| !! | CCTAAAAGAAGCATCTCCGT+CGG | + | tig0021283:59148-59167 | Msa1389470:CDS | 45.0% |
| !! | CTAAAAGAAGCATCTCCGTC+GGG | + | tig0021283:59149-59168 | Msa1389470:CDS | 45.0% |
| !! | TAAAAGAAGCATCTCCGTCG+GGG | + | tig0021283:59150-59169 | Msa1389470:CDS | 45.0% |
| TACGACGACAAGTGAAAGTG+AGG | + | tig0021283:59215-59234 | Msa1389470:CDS | 45.0% | |
| ACGACGACAAGTGAAAGTGA+GGG | + | tig0021283:59216-59235 | Msa1389470:CDS | 45.0% | |
| AAAGTGAGGGCTGTGGAAAA+TGG | + | tig0021283:59229-59248 | Msa1389470:CDS | 45.0% | |
| CTGGTTGGAAGGATTGTGAT+AGG | + | tig0021283:59340-59359 | Msa1389470:CDS | 45.0% | |
| GGAAGTTCTCAACAGTTTGC+GGG | - | tig0021283:59384-59403 | None:intergenic | 45.0% | |
| CGGAAGTTCTCAACAGTTTG+CGG | - | tig0021283:59385-59404 | None:intergenic | 45.0% | |
| ATCTATCTATCGCAGGGAAC+TGG | + | tig0021283:59581-59600 | Msa1389470:intron | 45.0% | |
| !! | ACTGGAGGCAAAAGTATCTC+TGG | + | tig0021283:59599-59618 | Msa1389470:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+GGG | - | tig0021283:59877-59896 | None:intergenic | 45.0% |
| ! | AAACTGACTCCCATTGGTGT+TGG | - | tig0021283:59878-59897 | None:intergenic | 45.0% |
| TGTCCATGCCTTCCAAAACT+TGG | - | tig0021283:60038-60057 | None:intergenic | 45.0% | |
| ! | TGGAAGGCATGGACATTGTT+AGG | + | tig0021283:60043-60062 | Msa1389470:CDS | 45.0% |
| AAGGTGACAATCAGTGACTG+TGG | + | tig0021283:60111-60130 | Msa1389470:CDS | 45.0% | |
| ! | ATGGTGGTGAATCCATCCTT+TGG | + | tig0021283:58829-58848 | Msa1389470:intron | 45.0% |
| ! | TGGTGGTGAATCCATCCTTT+GGG | + | tig0021283:58830-58849 | Msa1389470:intron | 45.0% |
| TCAACACCGAAGAAGAAGGA+AGG | - | tig0021283:58921-58940 | None:intergenic | 45.0% | |
| TGGTTCAACACCGAAGAAGA+AGG | - | tig0021283:58925-58944 | None:intergenic | 45.0% | |
| TTGAATGCAGCAACAGCCAT+CGG | - | tig0021283:58949-58968 | None:intergenic | 45.0% | |
| GATTGATTGTCTTGGTTGGG+TGG | + | tig0021283:59088-59107 | Msa1389470:intron | 45.0% | |
| ! | CGACGGAGATGCTTCTTTTA+GGG | - | tig0021283:59150-59169 | None:intergenic | 45.0% |
| !! | CCTAAAAGAAGCATCTCCGT+CGG | + | tig0021283:59148-59167 | Msa1389470:CDS | 45.0% |
| !! | CTAAAAGAAGCATCTCCGTC+GGG | + | tig0021283:59149-59168 | Msa1389470:CDS | 45.0% |
| !! | TAAAAGAAGCATCTCCGTCG+GGG | + | tig0021283:59150-59169 | Msa1389470:CDS | 45.0% |
| TACGACGACAAGTGAAAGTG+AGG | + | tig0021283:59215-59234 | Msa1389470:CDS | 45.0% | |
| ACGACGACAAGTGAAAGTGA+GGG | + | tig0021283:59216-59235 | Msa1389470:CDS | 45.0% | |
| AAAGTGAGGGCTGTGGAAAA+TGG | + | tig0021283:59229-59248 | Msa1389470:CDS | 45.0% | |
| CTGGTTGGAAGGATTGTGAT+AGG | + | tig0021283:59340-59359 | Msa1389470:CDS | 45.0% | |
| GGAAGTTCTCAACAGTTTGC+GGG | - | tig0021283:59384-59403 | None:intergenic | 45.0% | |
| CGGAAGTTCTCAACAGTTTG+CGG | - | tig0021283:59385-59404 | None:intergenic | 45.0% | |
| ATCTATCTATCGCAGGGAAC+TGG | + | tig0021283:59581-59600 | Msa1389470:intron | 45.0% | |
| !! | ACTGGAGGCAAAAGTATCTC+TGG | + | tig0021283:59599-59618 | Msa1389470:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+GGG | - | tig0021283:59877-59896 | None:intergenic | 45.0% |
| ! | AAACTGACTCCCATTGGTGT+TGG | - | tig0021283:59878-59897 | None:intergenic | 45.0% |
| TGTCCATGCCTTCCAAAACT+TGG | - | tig0021283:60038-60057 | None:intergenic | 45.0% | |
| ! | TGGAAGGCATGGACATTGTT+AGG | + | tig0021283:60043-60062 | Msa1389470:CDS | 45.0% |
| AAGGTGACAATCAGTGACTG+TGG | + | tig0021283:60111-60130 | Msa1389470:CDS | 45.0% | |
| TCGCGCGTGCGTTAAAATTG+AGG | - | tig0021283:58891-58910 | None:intergenic | 50.0% | |
| CACCGAAGAAGAAGGAAGGA+AGG | - | tig0021283:58917-58936 | None:intergenic | 50.0% | |
| !! | TTCGGTGTTGAACCAACCGA+TGG | + | tig0021283:58930-58949 | Msa1389470:intron | 50.0% |
| ! | CCGACGGAGATGCTTCTTTT+AGG | - | tig0021283:59151-59170 | None:intergenic | 50.0% |
| TAGTTTCACACCCACACCTC+GGG | - | tig0021283:59185-59204 | None:intergenic | 50.0% | |
| CTAGTTTCACACCCACACCT+CGG | - | tig0021283:59186-59205 | None:intergenic | 50.0% | |
| GTGGGTGTGAAACTAGCAGT+AGG | + | tig0021283:59190-59209 | Msa1389470:CDS | 50.0% | |
| ACAAGTGAAAGTGAGGGCTG+TGG | + | tig0021283:59222-59241 | Msa1389470:CDS | 50.0% | |
| TGGAAATCCAGTTGGGAAGC+TGG | + | tig0021283:59321-59340 | Msa1389470:CDS | 50.0% | |
| AATCCAGTTGGGAAGCTGGT+TGG | + | tig0021283:59325-59344 | Msa1389470:CDS | 50.0% | |
| !! | TGAAGTCCTTGATGACGCGA+TGG | - | tig0021283:59456-59475 | None:intergenic | 50.0% |
| TATCTATCGCAGGGAACTGG+AGG | + | tig0021283:59584-59603 | Msa1389470:intron | 50.0% | |
| TTTGCCATGCTAACAGCTCC+TGG | - | tig0021283:59847-59866 | None:intergenic | 50.0% | |
| GCTGTTAGCATGGCAAATGC+TGG | + | tig0021283:59850-59869 | Msa1389470:CDS | 50.0% | |
| AATGCTGGTCCCAACACCAA+TGG | + | tig0021283:59865-59884 | Msa1389470:CDS | 50.0% | |
| ATGCTGGTCCCAACACCAAT+GGG | + | tig0021283:59866-59885 | Msa1389470:CDS | 50.0% | |
| !!! | TGGCCAAGTTTTGGAAGGCA+TGG | + | tig0021283:60032-60051 | Msa1389470:CDS | 50.0% |
| TGGTGATCGTCCCCTAAAGA+AGG | + | tig0021283:60092-60111 | Msa1389470:CDS | 50.0% | |
| TCGCGCGTGCGTTAAAATTG+AGG | - | tig0021283:58891-58910 | None:intergenic | 50.0% | |
| CACCGAAGAAGAAGGAAGGA+AGG | - | tig0021283:58917-58936 | None:intergenic | 50.0% | |
| !! | TTCGGTGTTGAACCAACCGA+TGG | + | tig0021283:58930-58949 | Msa1389470:intron | 50.0% |
| ! | CCGACGGAGATGCTTCTTTT+AGG | - | tig0021283:59151-59170 | None:intergenic | 50.0% |
| TAGTTTCACACCCACACCTC+GGG | - | tig0021283:59185-59204 | None:intergenic | 50.0% | |
| CTAGTTTCACACCCACACCT+CGG | - | tig0021283:59186-59205 | None:intergenic | 50.0% | |
| GTGGGTGTGAAACTAGCAGT+AGG | + | tig0021283:59190-59209 | Msa1389470:CDS | 50.0% | |
| ACAAGTGAAAGTGAGGGCTG+TGG | + | tig0021283:59222-59241 | Msa1389470:CDS | 50.0% | |
| TGGAAATCCAGTTGGGAAGC+TGG | + | tig0021283:59321-59340 | Msa1389470:CDS | 50.0% | |
| AATCCAGTTGGGAAGCTGGT+TGG | + | tig0021283:59325-59344 | Msa1389470:CDS | 50.0% | |
| !! | TGAAGTCCTTGATGACGCGA+TGG | - | tig0021283:59456-59475 | None:intergenic | 50.0% |
| TATCTATCGCAGGGAACTGG+AGG | + | tig0021283:59584-59603 | Msa1389470:intron | 50.0% | |
| TTTGCCATGCTAACAGCTCC+TGG | - | tig0021283:59847-59866 | None:intergenic | 50.0% | |
| GCTGTTAGCATGGCAAATGC+TGG | + | tig0021283:59850-59869 | Msa1389470:CDS | 50.0% | |
| AATGCTGGTCCCAACACCAA+TGG | + | tig0021283:59865-59884 | Msa1389470:CDS | 50.0% | |
| ATGCTGGTCCCAACACCAAT+GGG | + | tig0021283:59866-59885 | Msa1389470:CDS | 50.0% | |
| !!! | TGGCCAAGTTTTGGAAGGCA+TGG | + | tig0021283:60032-60051 | Msa1389470:CDS | 50.0% |
| TGGTGATCGTCCCCTAAAGA+AGG | + | tig0021283:60092-60111 | Msa1389470:CDS | 50.0% | |
| ATGCAGCAACAGCCATCGGT+TGG | - | tig0021283:58945-58964 | None:intergenic | 55.0% | |
| CTTCCAACCAGCTTCCCAAC+TGG | - | tig0021283:59331-59350 | None:intergenic | 55.0% | |
| CAGTTGGGAAGCTGGTTGGA+AGG | + | tig0021283:59329-59348 | Msa1389470:CDS | 55.0% | |
| TCTCACTGGTGGAAAGGGCA+CGG | - | tig0021283:59405-59424 | None:intergenic | 55.0% | |
| TGCCCTTTCCACCAGTGAGA+AGG | + | tig0021283:59405-59424 | Msa1389470:CDS | 55.0% | |
| GCCCTTTCCACCAGTGAGAA+GGG | + | tig0021283:59406-59425 | Msa1389470:CDS | 55.0% | |
| GCCCTTCTCACTGGTGGAAA+GGG | - | tig0021283:59410-59429 | None:intergenic | 55.0% | |
| AGCCCTTCTCACTGGTGGAA+AGG | - | tig0021283:59411-59430 | None:intergenic | 55.0% | |
| TCCACCAGTGAGAAGGGCTT+TGG | + | tig0021283:59412-59431 | Msa1389470:CDS | 55.0% | |
| GTAGCCAAAGCCCTTCTCAC+TGG | - | tig0021283:59419-59438 | None:intergenic | 55.0% | |
| !! | CTTGATGACGCGATGGAAGG+TGG | - | tig0021283:59449-59468 | None:intergenic | 55.0% |
| CACCTTCCATCGCGTCATCA+AGG | + | tig0021283:59447-59466 | Msa1389470:CDS | 55.0% | |
| !! | GTCCTTGATGACGCGATGGA+AGG | - | tig0021283:59452-59471 | None:intergenic | 55.0% |
| CTAGTGTCTCATACCGGACC+AGG | + | tig0021283:59826-59845 | Msa1389470:intron | 55.0% | |
| CATGCTAACAGCTCCTGGTC+CGG | - | tig0021283:59842-59861 | None:intergenic | 55.0% | |
| CATGACATTGGCAGACGCTG+TGG | + | tig0021283:59986-60005 | Msa1389470:intron | 55.0% | |
| GAATCACGGGAGACTGATCG+TGG | + | tig0021283:60072-60091 | Msa1389470:CDS | 55.0% | |
| ATGCAGCAACAGCCATCGGT+TGG | - | tig0021283:58945-58964 | None:intergenic | 55.0% | |
| CTTCCAACCAGCTTCCCAAC+TGG | - | tig0021283:59331-59350 | None:intergenic | 55.0% | |
| CAGTTGGGAAGCTGGTTGGA+AGG | + | tig0021283:59329-59348 | Msa1389470:CDS | 55.0% | |
| TCTCACTGGTGGAAAGGGCA+CGG | - | tig0021283:59405-59424 | None:intergenic | 55.0% | |
| TGCCCTTTCCACCAGTGAGA+AGG | + | tig0021283:59405-59424 | Msa1389470:CDS | 55.0% | |
| GCCCTTTCCACCAGTGAGAA+GGG | + | tig0021283:59406-59425 | Msa1389470:CDS | 55.0% | |
| GCCCTTCTCACTGGTGGAAA+GGG | - | tig0021283:59410-59429 | None:intergenic | 55.0% | |
| AGCCCTTCTCACTGGTGGAA+AGG | - | tig0021283:59411-59430 | None:intergenic | 55.0% | |
| TCCACCAGTGAGAAGGGCTT+TGG | + | tig0021283:59412-59431 | Msa1389470:CDS | 55.0% | |
| GTAGCCAAAGCCCTTCTCAC+TGG | - | tig0021283:59419-59438 | None:intergenic | 55.0% | |
| !! | CTTGATGACGCGATGGAAGG+TGG | - | tig0021283:59449-59468 | None:intergenic | 55.0% |
| CACCTTCCATCGCGTCATCA+AGG | + | tig0021283:59447-59466 | Msa1389470:CDS | 55.0% | |
| !! | GTCCTTGATGACGCGATGGA+AGG | - | tig0021283:59452-59471 | None:intergenic | 55.0% |
| CTAGTGTCTCATACCGGACC+AGG | + | tig0021283:59826-59845 | Msa1389470:intron | 55.0% | |
| CATGCTAACAGCTCCTGGTC+CGG | - | tig0021283:59842-59861 | None:intergenic | 55.0% | |
| CATGACATTGGCAGACGCTG+TGG | + | tig0021283:59986-60005 | Msa1389470:intron | 55.0% | |
| GAATCACGGGAGACTGATCG+TGG | + | tig0021283:60072-60091 | Msa1389470:CDS | 55.0% | |
| !! | AAGAAGCATCTCCGTCGGGG+TGG | + | tig0021283:59153-59172 | Msa1389470:CDS | 60.0% |
| GTGGTTAGGTCCCGAGGTGT+GGG | + | tig0021283:59172-59191 | Msa1389470:CDS | 60.0% | |
| GCCAAAGCCCTTCTCACTGG+TGG | - | tig0021283:59416-59435 | None:intergenic | 60.0% | |
| GATGACGCGATGGAAGGTGG+AGG | - | tig0021283:59446-59465 | None:intergenic | 60.0% | |
| CGGACCAGGAGCTGTTAGCA+TGG | + | tig0021283:59840-59859 | Msa1389470:CDS | 60.0% | |
| ACATTGGCAGACGCTGTGGC+TGG | + | tig0021283:59990-60009 | Msa1389470:intron | 60.0% | |
| AGACGCTGTGGCTGGATCAG+AGG | + | tig0021283:59998-60017 | Msa1389470:intron | 60.0% | |
| !! | AAGAAGCATCTCCGTCGGGG+TGG | + | tig0021283:59153-59172 | Msa1389470:CDS | 60.0% |
| GTGGTTAGGTCCCGAGGTGT+GGG | + | tig0021283:59172-59191 | Msa1389470:CDS | 60.0% | |
| GCCAAAGCCCTTCTCACTGG+TGG | - | tig0021283:59416-59435 | None:intergenic | 60.0% | |
| GATGACGCGATGGAAGGTGG+AGG | - | tig0021283:59446-59465 | None:intergenic | 60.0% | |
| CGGACCAGGAGCTGTTAGCA+TGG | + | tig0021283:59840-59859 | Msa1389470:CDS | 60.0% | |
| ACATTGGCAGACGCTGTGGC+TGG | + | tig0021283:59990-60009 | Msa1389470:intron | 60.0% | |
| AGACGCTGTGGCTGGATCAG+AGG | + | tig0021283:59998-60017 | Msa1389470:intron | 60.0% | |
| GCATCTCCGTCGGGGTGGTT+AGG | + | tig0021283:59158-59177 | Msa1389470:CDS | 65.0% | |
| TCGGGACCTAACCACCCCGA+CGG | - | tig0021283:59167-59186 | None:intergenic | 65.0% | |
| GGTGGTTAGGTCCCGAGGTG+TGG | + | tig0021283:59171-59190 | Msa1389470:CDS | 65.0% | |
| GCATCTCCGTCGGGGTGGTT+AGG | + | tig0021283:59158-59177 | Msa1389470:CDS | 65.0% | |
| TCGGGACCTAACCACCCCGA+CGG | - | tig0021283:59167-59186 | None:intergenic | 65.0% | |
| GGTGGTTAGGTCCCGAGGTG+TGG | + | tig0021283:59171-59190 | Msa1389470:CDS | 65.0% | |
| GTCGGGGTGGTTAGGTCCCG+AGG | + | tig0021283:59166-59185 | Msa1389470:CDS | 70.0% | |
| GTCGGGGTGGTTAGGTCCCG+AGG | + | tig0021283:59166-59185 | Msa1389470:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021283 | gene | 58829 | 60335 | 58829 | ID=Msa1389470;Name=Msa1389470 |
| tig0021283 | mRNA | 58829 | 60335 | 58829 | ID=Msa1389470-mRNA-1;Parent=Msa1389470;Name=Msa1389470-mRNA-1;_AED=0.14;_eAED=0.15;_QI=0|0.6|0.5|1|1|1|6|183|226 |
| tig0021283 | exon | 58829 | 58834 | 58829 | ID=Msa1389470-mRNA-1:exon:11602;Parent=Msa1389470-mRNA-1 |
| tig0021283 | exon | 59115 | 59270 | 59115 | ID=Msa1389470-mRNA-1:exon:11603;Parent=Msa1389470-mRNA-1 |
| tig0021283 | exon | 59283 | 59507 | 59283 | ID=Msa1389470-mRNA-1:exon:11604;Parent=Msa1389470-mRNA-1 |
| tig0021283 | exon | 59596 | 59650 | 59596 | ID=Msa1389470-mRNA-1:exon:11605;Parent=Msa1389470-mRNA-1 |
| tig0021283 | exon | 59830 | 59915 | 59830 | ID=Msa1389470-mRNA-1:exon:11606;Parent=Msa1389470-mRNA-1 |
| tig0021283 | exon | 60000 | 60335 | 60000 | ID=Msa1389470-mRNA-1:exon:11607;Parent=Msa1389470-mRNA-1 |
| tig0021283 | CDS | 58829 | 58834 | 58829 | ID=Msa1389470-mRNA-1:cds;Parent=Msa1389470-mRNA-1 |
| tig0021283 | CDS | 59115 | 59270 | 59115 | ID=Msa1389470-mRNA-1:cds;Parent=Msa1389470-mRNA-1 |
| tig0021283 | CDS | 59283 | 59507 | 59283 | ID=Msa1389470-mRNA-1:cds;Parent=Msa1389470-mRNA-1 |
| tig0021283 | CDS | 59596 | 59650 | 59596 | ID=Msa1389470-mRNA-1:cds;Parent=Msa1389470-mRNA-1 |
| tig0021283 | CDS | 59830 | 59915 | 59830 | ID=Msa1389470-mRNA-1:cds;Parent=Msa1389470-mRNA-1 |
| tig0021283 | CDS | 60000 | 60152 | 60000 | ID=Msa1389470-mRNA-1:cds;Parent=Msa1389470-mRNA-1 |
| tig0021283 | three_prime_UTR | 60153 | 60335 | 60153 | ID=Msa1389470-mRNA-1:three_prime_utr;Parent=Msa1389470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
