AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0403730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0403730 MtrunA17_Chr3g0103431 99.228 259 2 0 1 259 1 259 0.0 525
Msa0403730 MtrunA17_Chr8g0370451 50.588 255 114 4 12 259 40 289 4.81e-74 227
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0403730 AT3G20890.1 62.034 295 73 5 1 259 1 292 3.28e-113 327
Msa0403730 AT3G20890.2 59.113 203 50 1 90 259 27 229 1.55e-79 239
Msa0403730 AT5G66010.1 48.760 242 111 5 10 247 10 242 1.25e-72 223
Msa0403730 AT5G66010.2 47.260 146 72 2 106 247 1 145 1.56e-42 142

Find 90 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCGAAGGCTTCTGTGTTT+TGG 0.180490 3_2:+34281816 Msa0403730:CDS
ATGTGCTCTCTCGCGGTTGC+CGG 0.255281 3_2:-34277794 None:intergenic
ATTATATGGAACTTTCTTAT+TGG 0.267596 3_2:+34282476 Msa0403730:three_prime_UTR
GACGCGGGATCTTCATTCTA+TGG 0.326213 3_2:+34281604 Msa0403730:CDS
TCATCCTTATTAGCAGAAAA+TGG 0.345506 3_2:-34282066 None:intergenic
AATTCAGAGGGAAGACCATC+TGG 0.348327 3_2:+34282147 Msa0403730:CDS
AGATGGATTGTACATATAAC+TGG 0.382208 3_2:-34281638 None:intergenic
ACTTTGCTCTTCAAAGAAAC+AGG 0.406141 3_2:+34281857 Msa0403730:CDS
TGCTAATAAGGATGACATAA+TGG 0.410596 3_2:+34282074 Msa0403730:CDS
TCTTCATTCTATGGTTCCCC+TGG 0.414721 3_2:+34281613 Msa0403730:CDS
GAGGACGATGATTGCTTGGT+TGG 0.416705 3_2:+34282301 Msa0403730:exon
TCCATCTCACCATGCGTTGA+AGG 0.422533 3_2:-34282264 None:intergenic
TCTTATTGGTCGTCAAGTAT+CGG 0.426107 3_2:+34282490 Msa0403730:three_prime_UTR
CTTATTGGTCGTCAAGTATC+GGG 0.426194 3_2:+34282491 Msa0403730:three_prime_UTR
CTACAAGGCAATTGCAAATG+AGG 0.431623 3_2:+34281933 Msa0403730:CDS
GAAGAGCAGATTGAATTATA+TGG 0.431711 3_2:+34282462 Msa0403730:three_prime_UTR
CGCAGTCGAACAACAGGAAA+TGG 0.442842 3_2:-34281694 None:intergenic
AGACCGCGCAGTCGAACAAC+AGG 0.447152 3_2:-34281700 None:intergenic
CTCCATCATATGATTTAGCT+CGG 0.453352 3_2:-34281996 None:intergenic
TGTGCTCTCTCGCGGTTGCC+GGG 0.457807 3_2:-34277793 None:intergenic
ATTGTTGTAGAAGAAATTGA+AGG 0.462689 3_2:-34277850 None:intergenic
ACCATCTGGGGAGGCTTATG+TGG 0.470749 3_2:+34282161 Msa0403730:CDS
TCAAGAGGACGATGATTGCT+TGG 0.483132 3_2:+34282297 Msa0403730:exon
CTTCAAGGAGTATGTGTTGT+CGG 0.500765 3_2:+34282101 Msa0403730:CDS
CACAGGAGTGTTGCGACTGA+GGG 0.505697 3_2:+34282038 Msa0403730:CDS
TCCATCATATGATTTAGCTC+GGG 0.508153 3_2:-34281995 None:intergenic
ATGTACAATCCATCTCCATA+TGG 0.508179 3_2:+34281646 Msa0403730:CDS
CTCGGGGAGCACTACGACGA+GGG 0.508597 3_2:-34281978 None:intergenic
ACAGGAAATGGTGGAGGAGG+AGG 0.509420 3_2:-34281682 None:intergenic
ATCAGTTTCAGTGCAATCAA+AGG 0.523371 3_2:-34281725 None:intergenic
TGGTGGTGATGGGCGTGAAA+TGG 0.525727 3_2:+34281558 Msa0403730:CDS
AAATTTGCTGATGGTGGTGA+TGG 0.527499 3_2:+34281547 Msa0403730:CDS
CCATCTCACCATGCGTTGAA+GGG 0.532489 3_2:-34282263 None:intergenic
TGACATAATGGAGTTCTTCA+AGG 0.535855 3_2:+34282086 Msa0403730:CDS
CCCCGAGCTAAATCATATGA+TGG 0.536873 3_2:+34281994 Msa0403730:CDS
GATGTGGCCGAGTTCTTCCA+TGG 0.538399 3_2:+34281745 Msa0403730:CDS
CCCTTCAACGCATGGTGAGA+TGG 0.538750 3_2:+34282263 Msa0403730:CDS
GCAAAGGATAGAATGACGCT+TGG 0.544787 3_2:+34282219 Msa0403730:CDS
CGTCATTCTATCCTTTGCCA+TGG 0.545218 3_2:-34282214 None:intergenic
TCAGTTTCAGTGCAATCAAA+GGG 0.547953 3_2:-34281724 None:intergenic
CAAAGGATAGAATGACGCTT+GGG 0.551160 3_2:+34282220 Msa0403730:CDS
GGTTGGCTGACATATCCATA+TGG 0.556296 3_2:-34281661 None:intergenic
CAAAGAAACAGGCAGAACAT+AGG 0.560049 3_2:+34281868 Msa0403730:CDS
TTCAGTAAATTTGCTGATGG+TGG 0.563548 3_2:+34281541 Msa0403730:intron
CTGACATATCCATATGGAGA+TGG 0.564910 3_2:-34281655 None:intergenic
TTGAAGGTTGCACGAAGATG+AGG 0.567373 3_2:-34277834 None:intergenic
ATTCAGAGGGAAGACCATCT+GGG 0.571117 3_2:+34282148 Msa0403730:CDS
TGTACATATAACTGGAACCA+GGG 0.571227 3_2:-34281630 None:intergenic
AGAGCAAAGTCAACTTGAAG+AGG 0.573046 3_2:-34281844 None:intergenic
ACAACAGGAAATGGTGGAGG+AGG 0.573282 3_2:-34281685 None:intergenic
TCCACATAAGCCTCCCCAGA+TGG 0.579302 3_2:-34282162 None:intergenic
GTCTAGACCATGGAAGAACT+CGG 0.581671 3_2:-34281752 None:intergenic
GAGCTATTCCCTTCAACGCA+TGG 0.586026 3_2:+34282255 Msa0403730:CDS
GAACGGTAGGAGACATAACC+CGG 0.586139 3_2:+34277775 Msa0403730:five_prime_UTR
TGATGATTCAAAAGCAGCCA+TGG 0.593984 3_2:+34282197 Msa0403730:CDS
AATTTCAGTAAATTTGCTGA+TGG 0.594224 3_2:+34281538 Msa0403730:intron
CTACAACAATGCTTTACAGA+GGG 0.595207 3_2:+34277863 Msa0403730:exon
ACACAGGAGTGTTGCGACTG+AGG 0.596079 3_2:+34282037 Msa0403730:CDS
TTCAAAAGCAGCCATGGCAA+AGG 0.597698 3_2:+34282203 Msa0403730:CDS
CCACATTGTAATGAATTCAG+AGG 0.601918 3_2:+34282134 Msa0403730:CDS
CGAACAACAGGAAATGGTGG+AGG 0.604157 3_2:-34281688 None:intergenic
GAAATGGTGGAGGAGGAGGT+TGG 0.608351 3_2:-34281678 None:intergenic
ATGGAAGATGCAATTTCAAG+AGG 0.609038 3_2:+34282282 Msa0403730:CDS
TGATTGCACTGAAACTGATG+TGG 0.609327 3_2:+34281729 Msa0403730:CDS
AGCAACGATGTGCTCTCTCG+CGG 0.609483 3_2:-34277801 None:intergenic
CACATTGTAATGAATTCAGA+GGG 0.613126 3_2:+34282135 Msa0403730:CDS
CCATCATATGATTTAGCTCG+GGG 0.614326 3_2:-34281994 None:intergenic
ACGTCAGCGGACAGTTGACG+CGG 0.625189 3_2:+34281588 Msa0403730:CDS
TCGGGGAGCACTACGACGAG+GGG 0.629479 3_2:-34281977 None:intergenic
AAAGATTCAGCTGAGCACAC+AGG 0.630687 3_2:+34282021 Msa0403730:CDS
AATTTGCTGATGGTGGTGAT+GGG 0.635503 3_2:+34281548 Msa0403730:CDS
TTTCCTGTTGTTCGACTGCG+CGG 0.636494 3_2:+34281697 Msa0403730:CDS
TAAGAGGCAGGAATACTACA+AGG 0.640162 3_2:+34281918 Msa0403730:CDS
CCTCTGAATTCATTACAATG+TGG 0.641568 3_2:-34282134 None:intergenic
TTCAGAGGGAAGACCATCTG+GGG 0.646058 3_2:+34282149 Msa0403730:CDS
CAAGGAGTATGTGTTGTCGG+AGG 0.654683 3_2:+34282104 Msa0403730:CDS
TCTACAACAATGCTTTACAG+AGG 0.657325 3_2:+34277862 Msa0403730:exon
CGTCAGCGGACAGTTGACGC+GGG 0.660169 3_2:+34281589 Msa0403730:CDS
CGAGCTAAATCATATGATGG+AGG 0.660288 3_2:+34281997 Msa0403730:CDS
TTGTACATATAACTGGAACC+AGG 0.660817 3_2:-34281631 None:intergenic
CATCAACTATGTCTAGACCA+TGG 0.660852 3_2:-34281762 None:intergenic
AGAGGGAAGACCATCTGGGG+AGG 0.662119 3_2:+34282152 Msa0403730:CDS
CGTTTGAAAGAGCAAATGAG+AGG 0.665587 3_2:-34282326 None:intergenic
GCTCGGGGAGCACTACGACG+AGG 0.665801 3_2:-34281979 None:intergenic
AGTCGAACAACAGGAAATGG+TGG 0.675557 3_2:-34281691 None:intergenic
ACAGGAGTGTTGCGACTGAG+GGG 0.684610 3_2:+34282039 Msa0403730:CDS
AATGAGGTTTCAGATGCTCG+AGG 0.692222 3_2:+34281949 Msa0403730:CDS
AAATGGCTTCAAAACGTCAG+CGG 0.695070 3_2:+34281575 Msa0403730:CDS
GAGGTTTCAGATGCTCGAGG+CGG 0.695093 3_2:+34281952 Msa0403730:CDS
GTACATATAACTGGAACCAG+GGG 0.705619 3_2:-34281629 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAACTTAATTTCATATA+TGG - chr3_2:34277721-34277740 None:intergenic 10.0%
!! TGAAATTAAGTTAAAAAATT+TGG + chr3_2:34277725-34277744 Msa0403730:five_prime_UTR 10.0%
!! GAAATTAAGTTAAAAAATTT+GGG + chr3_2:34277726-34277745 Msa0403730:five_prime_UTR 10.0%
!! AAAAATAAGATAAAAAAAGT+GGG + chr3_2:34277749-34277768 Msa0403730:five_prime_UTR 10.0%
!! ATATTACAATAAAAAAAACA+TGG - chr3_2:34277902-34277921 None:intergenic 10.0%
!! AAAATAACATAATAAAACAA+CGG + chr3_2:34279223-34279242 Msa0403730:intron 10.0%
!! TAATGTCTTTAAATTAAAAA+AGG + chr3_2:34281094-34281113 Msa0403730:intron 10.0%
!! TGTAATTTACCAAAAATAAA+AGG + chr3_2:34277690-34277709 Msa0403730:five_prime_UTR 15.0%
!! GAAAAATAAGATAAAAAAAG+TGG + chr3_2:34277748-34277767 Msa0403730:five_prime_UTR 15.0%
!! AAAAAAAACATGGAAAATTA+GGG - chr3_2:34277892-34277911 None:intergenic 15.0%
!! TAAAAAAAACATGGAAAATT+AGG - chr3_2:34277893-34277912 None:intergenic 15.0%
!! TATTGTAATATGCTTCTATT+AGG + chr3_2:34277911-34277930 Msa0403730:intron 20.0%
!! ATTGTAATATGCTTCTATTA+GGG + chr3_2:34277912-34277931 Msa0403730:intron 20.0%
!! ATTCAAAATCTCATCTAATT+AGG + chr3_2:34277939-34277958 Msa0403730:intron 20.0%
!! TTCAAAATCTCATCTAATTA+GGG + chr3_2:34277940-34277959 Msa0403730:intron 20.0%
!!! TGCAATTTTTTTGTGTTAAT+TGG + chr3_2:34278084-34278103 Msa0403730:intron 20.0%
!!! TCATTCTAAAGCAAAAAATT+AGG - chr3_2:34278204-34278223 None:intergenic 20.0%
!!! AATATGAAAGTATACCAAAA+TGG - chr3_2:34278338-34278357 None:intergenic 20.0%
!! AATACTATGATGAAAAGATT+TGG + chr3_2:34278747-34278766 Msa0403730:intron 20.0%
!! AAAGAAGGATTGAAAAAATA+GGG - chr3_2:34279121-34279140 None:intergenic 20.0%
!!! TATTTTGTTTGACATTTTGT+TGG - chr3_2:34279315-34279334 None:intergenic 20.0%
!!! AGAAGAAATTTGAAATCAAA+GGG - chr3_2:34280039-34280058 None:intergenic 20.0%
!!! AAGAAGAAATTTGAAATCAA+AGG - chr3_2:34280040-34280059 None:intergenic 20.0%
!!! TAGAATATAGCTTTTTTTGT+TGG + chr3_2:34280168-34280187 Msa0403730:intron 20.0%
!!! TTGAACAAGCATTTTTAAAA+TGG - chr3_2:34280373-34280392 None:intergenic 20.0%
!!! TATAGTGGATAAAATGATTT+AGG + chr3_2:34280629-34280648 Msa0403730:intron 20.0%
!!! ATAGTGGATAAAATGATTTA+GGG + chr3_2:34280630-34280649 Msa0403730:intron 20.0%
!! AGTAAATTTGCATTAAAAAG+CGG - chr3_2:34280743-34280762 None:intergenic 20.0%
!! AAGAATAAAAGACACATTTA+GGG - chr3_2:34281170-34281189 None:intergenic 20.0%
!! TAAGAATAAAAGACACATTT+AGG - chr3_2:34281171-34281190 None:intergenic 20.0%
!! TCAGGTTTGAAAATTAAAAT+AGG - chr3_2:34281326-34281345 None:intergenic 20.0%
!!! TTTATCACTGTATTTGTTTT+AGG + chr3_2:34282402-34282421 Msa0403730:three_prime_UTR 20.0%
!! ATTATATGGAACTTTCTTAT+TGG + chr3_2:34282476-34282495 Msa0403730:three_prime_UTR 20.0%
!!! ATGGATTTGCCTTTTATTTT+TGG - chr3_2:34277702-34277721 None:intergenic 25.0%
! ATTGTTGTAGAAGAAATTGA+AGG - chr3_2:34277853-34277872 None:intergenic 25.0%
!!! TCTAATTAGGGTTTTAATTC+AGG + chr3_2:34277952-34277971 Msa0403730:intron 25.0%
!! TTTGATCTGATTAGTAGTTT+TGG + chr3_2:34278360-34278379 Msa0403730:intron 25.0%
! TTTCTGTATTAACATTGTCT+TGG + chr3_2:34278791-34278810 Msa0403730:intron 25.0%
! GCAAAATTCAGGAATTTATT+AGG - chr3_2:34278874-34278893 None:intergenic 25.0%
! TGAAAAAATAGGGAAAATAG+AGG - chr3_2:34279111-34279130 None:intergenic 25.0%
! GAAAGAAGGATTGAAAAAAT+AGG - chr3_2:34279122-34279141 None:intergenic 25.0%
! TTGAATGAATGTATGAAAGA+AGG - chr3_2:34279136-34279155 None:intergenic 25.0%
! CTTGAATGAATGATGAAAAA+TGG - chr3_2:34279163-34279182 None:intergenic 25.0%
!! TTTGACATTTTGTTGGATTT+GGG - chr3_2:34279308-34279327 None:intergenic 25.0%
! AATATAATATCATGGCATCT+GGG + chr3_2:34279766-34279785 Msa0403730:intron 25.0%
!! TCAAAATTTTTGTTCTCTGA+AGG + chr3_2:34279886-34279905 Msa0403730:intron 25.0%
! CCGAAAATAGTAGAAATTAA+CGG - chr3_2:34280008-34280027 None:intergenic 25.0%
!! CCGTTAATTTCTACTATTTT+CGG + chr3_2:34280005-34280024 Msa0403730:intron 25.0%
!! CGTTAATTTCTACTATTTTC+GGG + chr3_2:34280006-34280025 Msa0403730:intron 25.0%
!! GAAGAAATTTGAAATCAAAG+GGG - chr3_2:34280038-34280057 None:intergenic 25.0%
! TTTCATTCTCTATTGCTTAA+AGG + chr3_2:34280097-34280116 Msa0403730:intron 25.0%
! TTCATTCTCTATTGCTTAAA+GGG + chr3_2:34280098-34280117 Msa0403730:intron 25.0%
! GTCATATAGATGATTATGTT+TGG + chr3_2:34280284-34280303 Msa0403730:intron 25.0%
!! CACTATAGTTTAAAGTAGTT+TGG - chr3_2:34280616-34280635 None:intergenic 25.0%
! CAAACTACTTTAAACTATAG+TGG + chr3_2:34280614-34280633 Msa0403730:intron 25.0%
! GATAACAGTACATAAATCAT+TGG - chr3_2:34280813-34280832 None:intergenic 25.0%
! AAATCCTGTCAAAAATATTC+AGG - chr3_2:34281344-34281363 None:intergenic 25.0%
!!! AAGCTTATTGACTTCAATTT+TGG + chr3_2:34281504-34281523 Msa0403730:intron 25.0%
!!! AATTTCAGTAAATTTGCTGA+TGG + chr3_2:34281538-34281557 Msa0403730:intron 25.0%
!! ATTACCATTTTCTGCTAATA+AGG + chr3_2:34282062-34282081 Msa0403730:CDS 25.0%
ATAAAAAAAGTGGGTACGAA+CGG + chr3_2:34277758-34277777 Msa0403730:five_prime_UTR 30.0%
!! CAACTGTTTCTGAATCAAAA+GGG + chr3_2:34278036-34278055 Msa0403730:intron 30.0%
TAACTATTCACTTTCTGTCA+TGG + chr3_2:34278411-34278430 Msa0403730:intron 30.0%
! ATAGACTCTAAAGGTATGTT+TGG - chr3_2:34278650-34278669 None:intergenic 30.0%
TGAAGCATAATAGACTCTAA+AGG - chr3_2:34278659-34278678 None:intergenic 30.0%
ATACTGAAATGTCAATGACT+TGG - chr3_2:34278713-34278732 None:intergenic 30.0%
AAAACTAGAGCGACAATATA+GGG - chr3_2:34278819-34278838 None:intergenic 30.0%
TAAAACTAGAGCGACAATAT+AGG - chr3_2:34278820-34278839 None:intergenic 30.0%
! GTTTGACATTTTGTTGGATT+TGG - chr3_2:34279309-34279328 None:intergenic 30.0%
AGAATGATGAAAATCGGATA+TGG + chr3_2:34279401-34279420 Msa0403730:intron 30.0%
GAATGATGAAAATCGGATAT+GGG + chr3_2:34279402-34279421 Msa0403730:intron 30.0%
AATGATGAAAATCGGATATG+GGG + chr3_2:34279403-34279422 Msa0403730:intron 30.0%
GAATATAATATCATGGCATC+TGG + chr3_2:34279765-34279784 Msa0403730:intron 30.0%
! AGTGACTAGTCATTTACTAT+AGG + chr3_2:34280062-34280081 Msa0403730:intron 30.0%
AAAAAAGCTATATTCTACCC+AGG - chr3_2:34280165-34280184 None:intergenic 30.0%
GAATTCTTCTAAGTAGCTTA+TGG - chr3_2:34280450-34280469 None:intergenic 30.0%
CTACTTAGAAGAATTCATTG+AGG + chr3_2:34280454-34280473 Msa0403730:intron 30.0%
CATATAACATAACGCACATT+TGG - chr3_2:34280518-34280537 None:intergenic 30.0%
AACTAAAAACCAACCCAAAT+GGG - chr3_2:34280570-34280589 None:intergenic 30.0%
AAACTAAAAACCAACCCAAA+TGG - chr3_2:34280571-34280590 None:intergenic 30.0%
CTGGATAAATATGTAAGACA+TGG - chr3_2:34280877-34280896 None:intergenic 30.0%
AGAAGAGAAGATAACTCTAA+GGG + chr3_2:34280907-34280926 Msa0403730:intron 30.0%
AAATTATGATCAGCGACAAT+TGG - chr3_2:34281202-34281221 None:intergenic 30.0%
!! CAAACCTGAATATTTTTGAC+AGG + chr3_2:34281337-34281356 Msa0403730:intron 30.0%
CAATTCATATTAACTGAGAC+AGG - chr3_2:34281371-34281390 None:intergenic 30.0%
! AACTTTAAAAGACAACCTAG+AGG + chr3_2:34281448-34281467 Msa0403730:intron 30.0%
!! AGATGGATTGTACATATAAC+TGG - chr3_2:34281641-34281660 None:intergenic 30.0%
! GATGTTCTTTTTGTTCACAA+AGG + chr3_2:34281781-34281800 Msa0403730:CDS 30.0%
! TTGAAGTTTTCAGAAGTAAG+AGG + chr3_2:34281902-34281921 Msa0403730:CDS 30.0%
TCATCCTTATTAGCAGAAAA+TGG - chr3_2:34282069-34282088 None:intergenic 30.0%
TGCTAATAAGGATGACATAA+TGG + chr3_2:34282074-34282093 Msa0403730:CDS 30.0%
CACATTGTAATGAATTCAGA+GGG + chr3_2:34282135-34282154 Msa0403730:CDS 30.0%
GAAGAGCAGATTGAATTATA+TGG + chr3_2:34282462-34282481 Msa0403730:three_prime_UTR 30.0%
TCTACAACAATGCTTTACAG+AGG + chr3_2:34277862-34277881 Msa0403730:exon 35.0%
CTACAACAATGCTTTACAGA+GGG + chr3_2:34277863-34277882 Msa0403730:exon 35.0%
!! CCTTTTGATTCAGAAACAGT+TGG - chr3_2:34278038-34278057 None:intergenic 35.0%
!! CCAACTGTTTCTGAATCAAA+AGG + chr3_2:34278035-34278054 Msa0403730:intron 35.0%
! TAATTGGAGTACTAAGCGAT+AGG + chr3_2:34278100-34278119 Msa0403730:intron 35.0%
ATAAAGCTGAATGCTAGAAG+TGG + chr3_2:34278157-34278176 Msa0403730:intron 35.0%
! TTCAATGTGCTGTTAACAAG+AGG + chr3_2:34278231-34278250 Msa0403730:intron 35.0%
GGATAACTGATAAGAGCTTA+TGG + chr3_2:34278252-34278271 Msa0403730:intron 35.0%
!!! GTTTATCTGTTGTGCCATTT+TGG + chr3_2:34278321-34278340 Msa0403730:intron 35.0%
TGATTGCTTAGGGTATGTTT+GGG + chr3_2:34278434-34278453 Msa0403730:intron 35.0%
!! TATGTTTGGTGGTTGGATTT+TGG - chr3_2:34278636-34278655 None:intergenic 35.0%
TTATGCTTCATGTTGTGTGT+TGG + chr3_2:34278669-34278688 Msa0403730:intron 35.0%
!!! ATTGTCGCTCTAGTTTTACA+AGG + chr3_2:34278822-34278841 Msa0403730:intron 35.0%
GAAAATAGAGGTTTCTCTTC+TGG - chr3_2:34279099-34279118 None:intergenic 35.0%
ATGATGAAAATCGGATATGG+GGG + chr3_2:34279404-34279423 Msa0403730:intron 35.0%
AAATTTCGAAGTTGGGAAGT+TGG + chr3_2:34279430-34279449 Msa0403730:intron 35.0%
TATACAACTTGCGCAAGTTA+AGG + chr3_2:34279547-34279566 Msa0403730:intron 35.0%
AAAGTAGGCCCTTGAAATAT+GGG - chr3_2:34279685-34279704 None:intergenic 35.0%
AAACAGGGAGAGTTAGTTAT+AGG + chr3_2:34279710-34279729 Msa0403730:intron 35.0%
AACAGGGAGAGTTAGTTATA+GGG + chr3_2:34279711-34279730 Msa0403730:intron 35.0%
TTATAGGGAGAGAAAGAAAG+TGG + chr3_2:34279726-34279745 Msa0403730:intron 35.0%
AGAAAGAAAGTGGAATGAAG+CGG + chr3_2:34279736-34279755 Msa0403730:intron 35.0%
!! AGAGCATTTTTGTTCTCTGA+AGG + chr3_2:34279813-34279832 Msa0403730:intron 35.0%
CTGAAATGAAGAGATTACAG+AGG - chr3_2:34279943-34279962 None:intergenic 35.0%
! CTCTATTGCTTAAAGGGTAT+TGG + chr3_2:34280104-34280123 Msa0403730:intron 35.0%
GTGAGATCCCACTTTAAATA+AGG + chr3_2:34280137-34280156 Msa0403730:intron 35.0%
! CCAGGATCCTTATTTAAAGT+GGG - chr3_2:34280147-34280166 None:intergenic 35.0%
CCACTTTAAATAAGGATCCT+GGG + chr3_2:34280145-34280164 Msa0403730:intron 35.0%
! GTTGAGTGATTATGCTGATT+AGG + chr3_2:34280204-34280223 Msa0403730:intron 35.0%
TTGCAGTAGTCTAATGAAAC+TGG - chr3_2:34280420-34280439 None:intergenic 35.0%
TTCTTCTAAGTAGCTTATGG+AGG - chr3_2:34280447-34280466 None:intergenic 35.0%
TATGTTGAATTGCACCCATT+TGG + chr3_2:34280553-34280572 Msa0403730:intron 35.0%
ATGTTGAATTGCACCCATTT+GGG + chr3_2:34280554-34280573 Msa0403730:intron 35.0%
TATCCATCCTTACTACTCTA+AGG + chr3_2:34280829-34280848 Msa0403730:intron 35.0%
ATCCATCCTTACTACTCTAA+GGG + chr3_2:34280830-34280849 Msa0403730:intron 35.0%
CAGAAGAGAAGATAACTCTA+AGG + chr3_2:34280906-34280925 Msa0403730:intron 35.0%
! ATAACTCTAAGGGTGTGTTT+GGG + chr3_2:34280917-34280936 Msa0403730:intron 35.0%
GACATAAGTTTAAGTCCTCT+AGG - chr3_2:34281466-34281485 None:intergenic 35.0%
GAGGACTTAAACTTATGTCT+TGG + chr3_2:34281467-34281486 Msa0403730:intron 35.0%
!! TTCAGTAAATTTGCTGATGG+TGG + chr3_2:34281541-34281560 Msa0403730:intron 35.0%
TGTACATATAACTGGAACCA+GGG - chr3_2:34281633-34281652 None:intergenic 35.0%
TTGTACATATAACTGGAACC+AGG - chr3_2:34281634-34281653 None:intergenic 35.0%
ATGTACAATCCATCTCCATA+TGG + chr3_2:34281646-34281665 Msa0403730:CDS 35.0%
TCAGTTTCAGTGCAATCAAA+GGG - chr3_2:34281727-34281746 None:intergenic 35.0%
ATCAGTTTCAGTGCAATCAA+AGG - chr3_2:34281728-34281747 None:intergenic 35.0%
! GTTCTTTTTGTTCACAAAGG+TGG + chr3_2:34281784-34281803 Msa0403730:CDS 35.0%
ACTTTGCTCTTCAAAGAAAC+AGG + chr3_2:34281857-34281876 Msa0403730:CDS 35.0%
! TCCATCATATGATTTAGCTC+GGG - chr3_2:34281998-34282017 None:intergenic 35.0%
CTCCATCATATGATTTAGCT+CGG - chr3_2:34281999-34282018 None:intergenic 35.0%
! TGACATAATGGAGTTCTTCA+AGG + chr3_2:34282086-34282105 Msa0403730:CDS 35.0%
CCTCTGAATTCATTACAATG+TGG - chr3_2:34282137-34282156 None:intergenic 35.0%
CCACATTGTAATGAATTCAG+AGG + chr3_2:34282134-34282153 Msa0403730:CDS 35.0%
ATGGAAGATGCAATTTCAAG+AGG + chr3_2:34282282-34282301 Msa0403730:CDS 35.0%
! AATTGCGACAATTTTGCTCA+AGG + chr3_2:34282373-34282392 Msa0403730:three_prime_UTR 35.0%
TCTTATTGGTCGTCAAGTAT+CGG + chr3_2:34282490-34282509 Msa0403730:three_prime_UTR 35.0%
TTCTGTCATGGTGATTGCTT+AGG + chr3_2:34278423-34278442 Msa0403730:intron 40.0%
TCTGTCATGGTGATTGCTTA+GGG + chr3_2:34278424-34278443 Msa0403730:intron 40.0%
GTGATTGCTTAGGGTATGTT+TGG + chr3_2:34278433-34278452 Msa0403730:intron 40.0%
TTAGGGTATGTTTGGGAGTT+GGG + chr3_2:34278441-34278460 Msa0403730:intron 40.0%
! TATGTTTGGGAGTTGGGTTT+TGG + chr3_2:34278447-34278466 Msa0403730:intron 40.0%
!! TTTGGTGGTTGGATTTTGGA+GGG - chr3_2:34278632-34278651 None:intergenic 40.0%
! CTAAAGGTATGTTTGGTGGT+TGG - chr3_2:34278643-34278662 None:intergenic 40.0%
! GACTCTAAAGGTATGTTTGG+TGG - chr3_2:34278647-34278666 None:intergenic 40.0%
!!! TCGCTCTAGTTTTACAAGGA+GGG + chr3_2:34278826-34278845 Msa0403730:intron 40.0%
! CTAAAAAGCGCAAGTGTGAT+AGG + chr3_2:34279276-34279295 Msa0403730:intron 40.0%
AAAAGCTACACAAGTCATGC+TGG + chr3_2:34279351-34279370 Msa0403730:intron 40.0%
GGCGCAAGAATGATGAAAAT+CGG + chr3_2:34279395-34279414 Msa0403730:intron 40.0%
TGATGAAAATCGGATATGGG+GGG + chr3_2:34279405-34279424 Msa0403730:intron 40.0%
GGGGGAAAAATTTCGAAGTT+GGG + chr3_2:34279423-34279442 Msa0403730:intron 40.0%
TTGGGAAGTTGGAGAAATGA+GGG + chr3_2:34279441-34279460 Msa0403730:intron 40.0%
GTAAAAATGGAAACGCTGCA+GGG + chr3_2:34279598-34279617 Msa0403730:intron 40.0%
ATTCCTGATCTGTACACACA+TGG + chr3_2:34279659-34279678 Msa0403730:intron 40.0%
ACACATGGCCCATATTTCAA+GGG + chr3_2:34279674-34279693 Msa0403730:intron 40.0%
CAAAGTAGGCCCTTGAAATA+TGG - chr3_2:34279686-34279705 None:intergenic 40.0%
TATTTCAAGGGCCTACTTTG+AGG + chr3_2:34279686-34279705 Msa0403730:intron 40.0%
ATTTCAAGGGCCTACTTTGA+GGG + chr3_2:34279687-34279706 Msa0403730:intron 40.0%
GAAAGAAAGTGGAATGAAGC+GGG + chr3_2:34279737-34279756 Msa0403730:intron 40.0%
AAAGAAAGTGGAATGAAGCG+GGG + chr3_2:34279738-34279757 Msa0403730:intron 40.0%
GGGAGGGGAATATAATATCA+TGG + chr3_2:34279758-34279777 Msa0403730:intron 40.0%
CCCACTTTAAATAAGGATCC+TGG + chr3_2:34280144-34280163 Msa0403730:intron 40.0%
! CCCAGGATCCTTATTTAAAG+TGG - chr3_2:34280148-34280167 None:intergenic 40.0%
!! ATTAGGACAAGCTCTAGGAA+AGG + chr3_2:34280221-34280240 Msa0403730:intron 40.0%
!! TTAGGACAAGCTCTAGGAAA+GGG + chr3_2:34280222-34280241 Msa0403730:intron 40.0%
GTCCTCTCAAAAACTTGACT+TGG + chr3_2:34280262-34280281 Msa0403730:intron 40.0%
!! GACCAAGTCAAGTTTTTGAG+AGG - chr3_2:34280267-34280286 None:intergenic 40.0%
GACATGAGAAAACGAATGCA+AGG + chr3_2:34280326-34280345 Msa0403730:intron 40.0%
TCTAAGTAGCTTATGGAGGA+GGG - chr3_2:34280443-34280462 None:intergenic 40.0%
TTCTAAGTAGCTTATGGAGG+AGG - chr3_2:34280444-34280463 None:intergenic 40.0%
AACTTTAACCATTCCCCCAA+GGG + chr3_2:34280771-34280790 Msa0403730:intron 40.0%
AATGCTAACGATTTCCCTTG+GGG - chr3_2:34280788-34280807 None:intergenic 40.0%
GAATGCTAACGATTTCCCTT+GGG - chr3_2:34280789-34280808 None:intergenic 40.0%
AGAATGCTAACGATTTCCCT+TGG - chr3_2:34280790-34280809 None:intergenic 40.0%
TAGATGCCCTTAGAGTAGTA+AGG - chr3_2:34280839-34280858 None:intergenic 40.0%
TTCTCTTCTGTCATCAACAC+TGG - chr3_2:34280896-34280915 None:intergenic 40.0%
! GATAACTCTAAGGGTGTGTT+TGG + chr3_2:34280916-34280935 Msa0403730:intron 40.0%
! GACACATTTAGGGTGTGTTT+GGG - chr3_2:34281160-34281179 None:intergenic 40.0%
! AGACACATTTAGGGTGTGTT+TGG - chr3_2:34281161-34281180 None:intergenic 40.0%
TGTGCACGGTTAAATCTAAC+AGG - chr3_2:34281254-34281273 None:intergenic 40.0%
!! AAATTTGCTGATGGTGGTGA+TGG + chr3_2:34281547-34281566 Msa0403730:CDS 40.0%
!! AATTTGCTGATGGTGGTGAT+GGG + chr3_2:34281548-34281567 Msa0403730:CDS 40.0%
AAATGGCTTCAAAACGTCAG+CGG + chr3_2:34281575-34281594 Msa0403730:CDS 40.0%
GTACATATAACTGGAACCAG+GGG - chr3_2:34281632-34281651 None:intergenic 40.0%
CTGACATATCCATATGGAGA+TGG - chr3_2:34281658-34281677 None:intergenic 40.0%
TGATTGCACTGAAACTGATG+TGG + chr3_2:34281729-34281748 Msa0403730:CDS 40.0%
CATCAACTATGTCTAGACCA+TGG - chr3_2:34281765-34281784 None:intergenic 40.0%
AGAGCAAAGTCAACTTGAAG+AGG - chr3_2:34281847-34281866 None:intergenic 40.0%
CAAAGAAACAGGCAGAACAT+AGG + chr3_2:34281868-34281887 Msa0403730:CDS 40.0%
! AGTTTTCAGAAGTAAGAGGC+AGG + chr3_2:34281906-34281925 Msa0403730:CDS 40.0%
TAAGAGGCAGGAATACTACA+AGG + chr3_2:34281918-34281937 Msa0403730:CDS 40.0%
CTACAAGGCAATTGCAAATG+AGG + chr3_2:34281933-34281952 Msa0403730:CDS 40.0%
! CCATCATATGATTTAGCTCG+GGG - chr3_2:34281997-34282016 None:intergenic 40.0%
CGAGCTAAATCATATGATGG+AGG + chr3_2:34281997-34282016 Msa0403730:CDS 40.0%
! CTTCAAGGAGTATGTGTTGT+CGG + chr3_2:34282101-34282120 Msa0403730:CDS 40.0%
TGATGATTCAAAAGCAGCCA+TGG + chr3_2:34282197-34282216 Msa0403730:CDS 40.0%
CAAAGGATAGAATGACGCTT+GGG + chr3_2:34282220-34282239 Msa0403730:CDS 40.0%
CGTTTGAAAGAGCAAATGAG+AGG - chr3_2:34282329-34282348 None:intergenic 40.0%
AAAAAGTGGGTACGAACGGT+AGG + chr3_2:34277762-34277781 Msa0403730:five_prime_UTR 45.0%
TTGAAGGTTGCACGAAGATG+AGG - chr3_2:34277837-34277856 None:intergenic 45.0%
GCTGAATGCTAGAAGTGGAA+TGG + chr3_2:34278162-34278181 Msa0403730:intron 45.0%
CTTAGGGTATGTTTGGGAGT+TGG + chr3_2:34278440-34278459 Msa0403730:intron 45.0%
!!! TTTGGGAGTTGGGTTTTGGA+GGG + chr3_2:34278451-34278470 Msa0403730:intron 45.0%
!! GTTTGGTGGTTGGATTTTGG+AGG - chr3_2:34278633-34278652 None:intergenic 45.0%
GCTTCATGTTGTGTGTTGGA+CGG + chr3_2:34278673-34278692 Msa0403730:intron 45.0%
TGTGTGTTGGACGGAAAAGT+TGG + chr3_2:34278682-34278701 Msa0403730:intron 45.0%
!!! GTCGCTCTAGTTTTACAAGG+AGG + chr3_2:34278825-34278844 Msa0403730:intron 45.0%
! CCTGAATTTTGCTCTTCACC+CGG + chr3_2:34278882-34278901 Msa0403730:intron 45.0%
GTATAATTGCAACGGCTGCA+GGG - chr3_2:34278923-34278942 None:intergenic 45.0%
! GCGCAAGGGTATAATTGCAA+CGG - chr3_2:34278931-34278950 None:intergenic 45.0%
GCGTTAGTTAACATGCGCAA+GGG - chr3_2:34278945-34278964 None:intergenic 45.0%
TGCGTTAGTTAACATGCGCA+AGG - chr3_2:34278946-34278965 None:intergenic 45.0%
GTTAACTCACGCATGGCTAA+TGG - chr3_2:34279053-34279072 None:intergenic 45.0%
!! TCCATCCCATTGGCTTTGAA+TGG + chr3_2:34279374-34279393 Msa0403730:intron 45.0%
TTGCGCCATTCAAAGCCAAT+GGG - chr3_2:34279382-34279401 None:intergenic 45.0%
GGGGGGAAAAATTTCGAAGT+TGG + chr3_2:34279422-34279441 Msa0403730:intron 45.0%
GTTGGGAAGTTGGAGAAATG+AGG + chr3_2:34279440-34279459 Msa0403730:intron 45.0%
!! AGCGTTACTTAACTTGCGCA+GGG + chr3_2:34279575-34279594 Msa0403730:intron 45.0%
AACTTGCGCAGGGGTAAAAA+TGG + chr3_2:34279585-34279604 Msa0403730:intron 45.0%
GGTAAAAATGGAAACGCTGC+AGG + chr3_2:34279597-34279616 Msa0403730:intron 45.0%
CACACATGGCCCATATTTCA+AGG + chr3_2:34279673-34279692 Msa0403730:intron 45.0%
! TTCTCTGAAGGAGCTTAGCT+TGG + chr3_2:34279898-34279917 Msa0403730:intron 45.0%
! TCTCTGAAGGAGCTTAGCTT+GGG + chr3_2:34279899-34279918 Msa0403730:intron 45.0%
! TGCTGATTAGGACAAGCTCT+AGG + chr3_2:34280216-34280235 Msa0403730:intron 45.0%
!! TTTTTGAGAGGACGCATGCA+TGG - chr3_2:34280255-34280274 None:intergenic 45.0%
TGAATTGCACCCATTTGGGT+TGG + chr3_2:34280558-34280577 Msa0403730:intron 45.0%
GAACTTTAACCATTCCCCCA+AGG + chr3_2:34280770-34280789 Msa0403730:intron 45.0%
ATGCTAACGATTTCCCTTGG+GGG - chr3_2:34280787-34280806 None:intergenic 45.0%
TGCCCTTAGAGTAGTAAGGA+TGG - chr3_2:34280835-34280854 None:intergenic 45.0%
! TAAGGGTGTGTTTGGGAAGA+GGG + chr3_2:34280924-34280943 Msa0403730:intron 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG + chr3_2:34280930-34280949 Msa0403730:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG + chr3_2:34280934-34280953 Msa0403730:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG - chr3_2:34280934-34280953 None:intergenic 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG - chr3_2:34280930-34280949 None:intergenic 45.0%
TTAGGGTGTGTTTGGGAAGA+GGG - chr3_2:34281153-34281172 None:intergenic 45.0%
! TTTAGGGTGTGTTTGGGAAG+AGG - chr3_2:34281154-34281173 None:intergenic 45.0%
GATCAGCGACAATTGGACAA+TGG - chr3_2:34281195-34281214 None:intergenic 45.0%
AACCGTGCACAATATGCAGA+AGG + chr3_2:34281263-34281282 Msa0403730:intron 45.0%
GACCTTCTGCATATTGTGCA+CGG - chr3_2:34281268-34281287 None:intergenic 45.0%
TCTTCATTCTATGGTTCCCC+TGG + chr3_2:34281613-34281632 Msa0403730:CDS 45.0%
! GGTTGGCTGACATATCCATA+TGG - chr3_2:34281664-34281683 None:intergenic 45.0%
AGTCGAACAACAGGAAATGG+TGG - chr3_2:34281694-34281713 None:intergenic 45.0%
GTCTAGACCATGGAAGAACT+CGG - chr3_2:34281755-34281774 None:intergenic 45.0%
! CACAAAGGTGGCAAGTTTTC+TGG + chr3_2:34281796-34281815 Msa0403730:CDS 45.0%
AATGAGGTTTCAGATGCTCG+AGG + chr3_2:34281949-34281968 Msa0403730:CDS 45.0%
CCCCGAGCTAAATCATATGA+TGG + chr3_2:34281994-34282013 Msa0403730:CDS 45.0%
AAAGATTCAGCTGAGCACAC+AGG + chr3_2:34282021-34282040 Msa0403730:CDS 45.0%
AATTCAGAGGGAAGACCATC+TGG + chr3_2:34282147-34282166 Msa0403730:CDS 45.0%
ATTCAGAGGGAAGACCATCT+GGG + chr3_2:34282148-34282167 Msa0403730:CDS 45.0%
TTCAAAAGCAGCCATGGCAA+AGG + chr3_2:34282203-34282222 Msa0403730:CDS 45.0%
CGTCATTCTATCCTTTGCCA+TGG - chr3_2:34282217-34282236 None:intergenic 45.0%
GCAAAGGATAGAATGACGCT+TGG + chr3_2:34282219-34282238 Msa0403730:CDS 45.0%
TCAAGAGGACGATGATTGCT+TGG + chr3_2:34282297-34282316 Msa0403730:exon 45.0%
!!! TATTTTTCTATTTTAAATTA+AGG + chr3_2:34278481-34278500 Msa0403730:intron 5.0%
GAACGGTAGGAGACATAACC+CGG + chr3_2:34277775-34277794 Msa0403730:five_prime_UTR 50.0%
!! GTTTGGGAGTTGGGTTTTGG+AGG + chr3_2:34278450-34278469 Msa0403730:intron 50.0%
!!! GAGTTGGGTTTTGGAGGGAA+GGG + chr3_2:34278456-34278475 Msa0403730:intron 50.0%
!! TGGTTGGATTTTGGAGGGCT+CGG - chr3_2:34278627-34278646 None:intergenic 50.0%
CCGGGTGAAGAGCAAAATTC+AGG - chr3_2:34278885-34278904 None:intergenic 50.0%
GGTATAATTGCAACGGCTGC+AGG - chr3_2:34278924-34278943 None:intergenic 50.0%
TGCGTGAGTTAACTCACGCA+TGG - chr3_2:34279060-34279079 None:intergenic 50.0%
GCCATTCAAAGCCAATGGGA+TGG - chr3_2:34279378-34279397 None:intergenic 50.0%
CTTGCGCCATTCAAAGCCAA+TGG - chr3_2:34279383-34279402 None:intergenic 50.0%
!! CAGCGTTACTTAACTTGCGC+AGG + chr3_2:34279574-34279593 Msa0403730:intron 50.0%
!! GCGTTACTTAACTTGCGCAG+GGG + chr3_2:34279576-34279595 Msa0403730:intron 50.0%
! AGGGTGTGAGTGATTTGTGC+TGG + chr3_2:34279617-34279636 Msa0403730:intron 50.0%
! GGGTGTGAGTGATTTGTGCT+GGG + chr3_2:34279618-34279637 Msa0403730:intron 50.0%
! GGCCTACTTTGAGGGAAACA+GGG + chr3_2:34279695-34279714 Msa0403730:intron 50.0%
CTCCCTGTTTCCCTCAAAGT+AGG - chr3_2:34279700-34279719 None:intergenic 50.0%
AAAGTGGAATGAAGCGGGGA+GGG + chr3_2:34279742-34279761 Msa0403730:intron 50.0%
! TCTCTGAAGGAGCTCAGCTA+TGG + chr3_2:34279826-34279845 Msa0403730:intron 50.0%
! CTCTGAAGGAGCTCAGCTAT+GGG + chr3_2:34279827-34279846 Msa0403730:intron 50.0%
! GGAGCTTAGCTTGGGATAGT+AGG + chr3_2:34279907-34279926 Msa0403730:intron 50.0%
TCTTGCTAACGAGTGTCCTG+AGG + chr3_2:34280653-34280672 Msa0403730:intron 50.0%
CTTGCTAACGAGTGTCCTGA+GGG + chr3_2:34280654-34280673 Msa0403730:intron 50.0%
TTGCTAACGAGTGTCCTGAG+GGG + chr3_2:34280655-34280674 Msa0403730:intron 50.0%
TTCCTTAACCAATGCCCCTC+AGG - chr3_2:34280672-34280691 None:intergenic 50.0%
AACGATTTCCCTTGGGGGAA+TGG - chr3_2:34280782-34280801 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGGAAG+AGG + chr3_2:34280923-34280942 Msa0403730:intron 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG + chr3_2:34280933-34280952 Msa0403730:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG + chr3_2:34280935-34280954 Msa0403730:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG + chr3_2:34280940-34280959 Msa0403730:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG - chr3_2:34280940-34280959 None:intergenic 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG - chr3_2:34280935-34280954 None:intergenic 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG - chr3_2:34280933-34280952 None:intergenic 50.0%
GACGCGGGATCTTCATTCTA+TGG + chr3_2:34281604-34281623 Msa0403730:CDS 50.0%
! ACAACAGGAAATGGTGGAGG+AGG - chr3_2:34281688-34281707 None:intergenic 50.0%
CGAACAACAGGAAATGGTGG+AGG - chr3_2:34281691-34281710 None:intergenic 50.0%
CGCAGTCGAACAACAGGAAA+TGG - chr3_2:34281697-34281716 None:intergenic 50.0%
TTTCCTGTTGTTCGACTGCG+CGG + chr3_2:34281697-34281716 Msa0403730:CDS 50.0%
! TGGCGAAGGCTTCTGTGTTT+TGG + chr3_2:34281816-34281835 Msa0403730:CDS 50.0%
! GGCGAAGGCTTCTGTGTTTT+GGG + chr3_2:34281817-34281836 Msa0403730:CDS 50.0%
! CAAGGAGTATGTGTTGTCGG+AGG + chr3_2:34282104-34282123 Msa0403730:CDS 50.0%
TTCAGAGGGAAGACCATCTG+GGG + chr3_2:34282149-34282168 Msa0403730:CDS 50.0%
GAGCTATTCCCTTCAACGCA+TGG + chr3_2:34282255-34282274 Msa0403730:CDS 50.0%
CCATCTCACCATGCGTTGAA+GGG - chr3_2:34282266-34282285 None:intergenic 50.0%
TCCATCTCACCATGCGTTGA+AGG - chr3_2:34282267-34282286 None:intergenic 50.0%
GAGGACGATGATTGCTTGGT+TGG + chr3_2:34282301-34282320 Msa0403730:exon 50.0%
AGCAACGATGTGCTCTCTCG+CGG - chr3_2:34277804-34277823 None:intergenic 55.0%
!!! GGAGTTGGGTTTTGGAGGGA+AGG + chr3_2:34278455-34278474 Msa0403730:intron 55.0%
GTCATGCTGGTCCATCCCAT+TGG + chr3_2:34279364-34279383 Msa0403730:intron 55.0%
GGGCCATGTGTGTACAGATC+AGG - chr3_2:34279665-34279684 None:intergenic 55.0%
! GGGCCTACTTTGAGGGAAAC+AGG + chr3_2:34279694-34279713 Msa0403730:intron 55.0%
GAAAGTGGAATGAAGCGGGG+AGG + chr3_2:34279741-34279760 Msa0403730:intron 55.0%
AAGTGGAATGAAGCGGGGAG+GGG + chr3_2:34279743-34279762 Msa0403730:intron 55.0%
!! GTCCTGAGGGGCATTGGTTA+AGG + chr3_2:34280667-34280686 Msa0403730:intron 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG + chr3_2:34280939-34280958 Msa0403730:intron 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG - chr3_2:34280939-34280958 None:intergenic 55.0%
!! TGGTGGTGATGGGCGTGAAA+TGG + chr3_2:34281558-34281577 Msa0403730:CDS 55.0%
! GAAATGGTGGAGGAGGAGGT+TGG - chr3_2:34281681-34281700 None:intergenic 55.0%
! ACAGGAAATGGTGGAGGAGG+AGG - chr3_2:34281685-34281704 None:intergenic 55.0%
GATGTGGCCGAGTTCTTCCA+TGG + chr3_2:34281745-34281764 Msa0403730:CDS 55.0%
!! GGTGGCAAGTTTTCTGGCGA+AGG + chr3_2:34281802-34281821 Msa0403730:CDS 55.0%
GAGGTTTCAGATGCTCGAGG+CGG + chr3_2:34281952-34281971 Msa0403730:CDS 55.0%
!! ACACAGGAGTGTTGCGACTG+AGG + chr3_2:34282037-34282056 Msa0403730:CDS 55.0%
!! CACAGGAGTGTTGCGACTGA+GGG + chr3_2:34282038-34282057 Msa0403730:CDS 55.0%
!! ACAGGAGTGTTGCGACTGAG+GGG + chr3_2:34282039-34282058 Msa0403730:CDS 55.0%
ACCATCTGGGGAGGCTTATG+TGG + chr3_2:34282161-34282180 Msa0403730:CDS 55.0%
TCCACATAAGCCTCCCCAGA+TGG - chr3_2:34282165-34282184 None:intergenic 55.0%
CCCTTCAACGCATGGTGAGA+TGG + chr3_2:34282263-34282282 Msa0403730:CDS 55.0%
ATGTGCTCTCTCGCGGTTGC+CGG - chr3_2:34277797-34277816 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+CGG - chr3_2:34278904-34278923 None:intergenic 60.0%
GGAGCTCAGCTATGGGCAGT+AGG + chr3_2:34279834-34279853 Msa0403730:intron 60.0%
! ACGAGTGTCCTGAGGGGCAT+TGG + chr3_2:34280661-34280680 Msa0403730:intron 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr3_2:34280943-34280962 Msa0403730:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr3_2:34280944-34280963 Msa0403730:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr3_2:34280945-34280964 Msa0403730:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr3_2:34280945-34280964 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr3_2:34280944-34280963 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr3_2:34280943-34280962 None:intergenic 60.0%
ACGTCAGCGGACAGTTGACG+CGG + chr3_2:34281588-34281607 Msa0403730:CDS 60.0%
AGACCGCGCAGTCGAACAAC+AGG - chr3_2:34281703-34281722 None:intergenic 60.0%
AGAGGGAAGACCATCTGGGG+AGG + chr3_2:34282152-34282171 Msa0403730:CDS 60.0%
TGTGCTCTCTCGCGGTTGCC+GGG - chr3_2:34277796-34277815 None:intergenic 65.0%
GGGCGCGAGCAAAATGTGCC+GGG - chr3_2:34278903-34278922 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr3_2:34280948-34280967 Msa0403730:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr3_2:34280949-34280968 Msa0403730:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr3_2:34280949-34280968 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr3_2:34280948-34280967 None:intergenic 65.0%
CGTCAGCGGACAGTTGACGC+GGG + chr3_2:34281589-34281608 Msa0403730:CDS 65.0%
!! TCGGGGAGCACTACGACGAG+GGG - chr3_2:34281980-34281999 None:intergenic 65.0%
!! CTCGGGGAGCACTACGACGA+GGG - chr3_2:34281981-34282000 None:intergenic 65.0%
!! GCTCGGGGAGCACTACGACG+AGG - chr3_2:34281982-34282001 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 34277689 34282513 34277689 ID=Msa0403730;Name=Msa0403730
chr3_2 mRNA 34277689 34282513 34277689 ID=Msa0403730-mRNA-1;Parent=Msa0403730;Name=Msa0403730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=182|1|1|1|1|1|2|202|259
chr3_2 exon 34277689 34277884 34277689 ID=Msa0403730-mRNA-1:exon:6800;Parent=Msa0403730-mRNA-1
chr3_2 exon 34281546 34282513 34281546 ID=Msa0403730-mRNA-1:exon:6801;Parent=Msa0403730-mRNA-1
chr3_2 five_prime_UTR 34277689 34277870 34277689 ID=Msa0403730-mRNA-1:five_prime_utr;Parent=Msa0403730-mRNA-1
chr3_2 CDS 34277871 34277884 34277871 ID=Msa0403730-mRNA-1:cds;Parent=Msa0403730-mRNA-1
chr3_2 CDS 34281546 34282311 34281546 ID=Msa0403730-mRNA-1:cds;Parent=Msa0403730-mRNA-1
chr3_2 three_prime_UTR 34282312 34282513 34282312 ID=Msa0403730-mRNA-1:three_prime_utr;Parent=Msa0403730-mRNA-1
Gene Sequence

>Msa0403730

ATGCTTTACAGAGGTAAATTTGCTGATGGTGGTGATGGGCGTGAAATGGCTTCAAAACGTCAGCGGACAGTTGACGCGGGATCTTCATTCTATGGTTCCCCTGGTTCCAGTTATATGTACAATCCATCTCCATATGGATATGTCAGCCAACCTCCTCCTCCACCATTTCCTGTTGTTCGACTGCGCGGTCTTCCCTTTGATTGCACTGAAACTGATGTGGCCGAGTTCTTCCATGGTCTAGACATAGTTGATGTTCTTTTTGTTCACAAAGGTGGCAAGTTTTCTGGCGAAGGCTTCTGTGTTTTGGGATATCCTCTTCAAGTTGACTTTGCTCTTCAAAGAAACAGGCAGAACATAGGTAGAAGATATGTTGAAGTTTTCAGAAGTAAGAGGCAGGAATACTACAAGGCAATTGCAAATGAGGTTTCAGATGCTCGAGGCGGTTCCCCTCGTCGTAGTGCTCCCCGAGCTAAATCATATGATGGAGGAAAAGATTCAGCTGAGCACACAGGAGTGTTGCGACTGAGGGGATTACCATTTTCTGCTAATAAGGATGACATAATGGAGTTCTTCAAGGAGTATGTGTTGTCGGAGGATTCGATCCACATTGTAATGAATTCAGAGGGAAGACCATCTGGGGAGGCTTATGTGGAATTTGAAAATGCTGATGATTCAAAAGCAGCCATGGCAAAGGATAGAATGACGCTTGGGAGTCGCTATATAGAGCTATTCCCTTCAACGCATGGTGAGATGGAAGATGCAATTTCAAGAGGACGATGA

Protein sequence

>Msa0403730

MLYRGKFADGGDGREMASKRQRTVDAGSSFYGSPGSSYMYNPSPYGYVSQPPPPPFPVVRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFSGEGFCVLGYPLQVDFALQRNRQNIGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSAPRAKSYDGGKDSAEHTGVLRLRGLPFSANKDDIMEFFKEYVLSEDSIHIVMNSEGRPSGEAYVEFENADDSKAAMAKDRMTLGSRYIELFPSTHGEMEDAISRGR*