Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106670 | XP_024633463.1 | 99.061 | 213 | 2 | 0 | 1 | 213 | 1 | 213 | 2.77e-155 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106670 | sp|F1QVR8|METL5_DANRE | 54.327 | 208 | 90 | 5 | 1 | 205 | 1 | 206 | 1.64e-71 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106670 | G7IA40 | 99.061 | 213 | 2 | 0 | 1 | 213 | 1 | 213 | 1.32e-155 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0106670 | 0.804335 | 2.269498e-49 | -8.615850e-47 |
| Msa0011170 | Msa0106670 | 0.804670 | 1.932486e-49 | -8.615850e-47 |
| Msa0011960 | Msa0106670 | 0.800250 | 1.573879e-48 | -8.615850e-47 |
| Msa0012040 | Msa0106670 | 0.811434 | 7.016197e-51 | -8.615850e-47 |
| Msa0013050 | Msa0106670 | -0.828597 | 8.227266e-55 | -8.615850e-47 |
| Msa0014710 | Msa0106670 | 0.818750 | 1.665097e-52 | -8.615850e-47 |
| Msa0017510 | Msa0106670 | 0.812067 | 5.107167e-51 | -8.615850e-47 |
| Msa0028640 | Msa0106670 | 0.815481 | 9.042610e-52 | -8.615850e-47 |
| Msa0037700 | Msa0106670 | 0.809272 | 2.053974e-50 | -8.615850e-47 |
| Msa0040450 | Msa0106670 | 0.801317 | 9.531961e-49 | -8.615850e-47 |
| Msa0044540 | Msa0106670 | -0.800234 | 1.586009e-48 | -8.615850e-47 |
| Msa0054480 | Msa0106670 | 0.807530 | 4.831712e-50 | -8.615850e-47 |
| Msa0061080 | Msa0106670 | 0.806286 | 8.855946e-50 | -8.615850e-47 |
| Msa0067990 | Msa0106670 | 0.806821 | 6.829684e-50 | -8.615850e-47 |
| Msa0101700 | Msa0106670 | 0.802356 | 5.833980e-49 | -8.615850e-47 |
| Msa0101710 | Msa0106670 | 0.825763 | 3.925936e-54 | -8.615850e-47 |
| Msa0106670 | Msa0116770 | 0.802876 | 4.555585e-49 | -8.615850e-47 |
| Msa0106670 | Msa0119850 | 0.829823 | 4.148443e-55 | -8.615850e-47 |
| Msa0106670 | Msa0133130 | 0.804333 | 2.272235e-49 | -8.615850e-47 |
| Msa0106670 | Msa0135380 | 0.805539 | 1.271424e-49 | -8.615850e-47 |
| Msa0106670 | Msa0136070 | 0.803689 | 3.092640e-49 | -8.615850e-47 |
| Msa0106670 | Msa0140390 | 0.807504 | 4.894565e-50 | -8.615850e-47 |
| Msa0106670 | Msa0143140 | -0.809219 | 2.107919e-50 | -8.615850e-47 |
| Msa0106670 | Msa0145440 | 0.803569 | 3.274344e-49 | -8.615850e-47 |
| Msa0106670 | Msa0150820 | 0.807005 | 6.244214e-50 | -8.615850e-47 |
| Msa0106670 | Msa0157100 | 0.800445 | 1.436414e-48 | -8.615850e-47 |
| Msa0106670 | Msa0157290 | 0.810909 | 9.117145e-51 | -8.615850e-47 |
| Msa0106670 | Msa0159180 | 0.802063 | 6.699978e-49 | -8.615850e-47 |
| Msa0106670 | Msa0160550 | 0.816644 | 4.972904e-52 | -8.615850e-47 |
| Msa0106670 | Msa0165220 | 0.805715 | 1.167500e-49 | -8.615850e-47 |
| Msa0106670 | Msa0193120 | 0.819755 | 9.830659e-53 | -8.615850e-47 |
| Msa0106670 | Msa0215320 | -0.800435 | 1.443033e-48 | -8.615850e-47 |
| Msa0106670 | Msa0223010 | 0.805690 | 1.181796e-49 | -8.615850e-47 |
| Msa0106670 | Msa0223410 | -0.818330 | 2.074112e-52 | -8.615850e-47 |
| Msa0106670 | Msa0226890 | 0.825732 | 3.992709e-54 | -8.615850e-47 |
| Msa0106670 | Msa0230770 | 0.802452 | 5.573396e-49 | -8.615850e-47 |
| Msa0106670 | Msa0241640 | 0.814961 | 1.179868e-51 | -8.615850e-47 |
| Msa0106670 | Msa0246430 | 0.803042 | 4.209669e-49 | -8.615850e-47 |
| Msa0106670 | Msa0270270 | 0.807694 | 4.459992e-50 | -8.615850e-47 |
| Msa0106670 | Msa0272530 | 0.807584 | 4.707449e-50 | -8.615850e-47 |
| Msa0106670 | Msa0279700 | 0.818764 | 1.653456e-52 | -8.615850e-47 |
| Msa0106670 | Msa0279790 | 0.839097 | 1.942854e-57 | -8.615850e-47 |
| Msa0106670 | Msa0289250 | 0.820834 | 5.564201e-53 | -8.615850e-47 |
| Msa0106670 | Msa0294560 | -0.804376 | 2.224954e-49 | -8.615850e-47 |
| Msa0106670 | Msa0298700 | 0.805311 | 1.419227e-49 | -8.615850e-47 |
| Msa0106670 | Msa0299870 | 0.807831 | 4.171254e-50 | -8.615850e-47 |
| Msa0106670 | Msa0309770 | 0.805899 | 1.068121e-49 | -8.615850e-47 |
| Msa0106670 | Msa0317510 | 0.800489 | 1.407157e-48 | -8.615850e-47 |
| Msa0106670 | Msa0333030 | 0.801229 | 9.935942e-49 | -8.615850e-47 |
| Msa0106670 | Msa0336420 | 0.825642 | 4.193365e-54 | -8.615850e-47 |
| Msa0106670 | Msa0337620 | 0.801360 | 9.342210e-49 | -8.615850e-47 |
| Msa0106670 | Msa0339620 | 0.801623 | 8.250847e-49 | -8.615850e-47 |
| Msa0106670 | Msa0340450 | 0.800954 | 1.130855e-48 | -8.615850e-47 |
| Msa0106670 | Msa0344830 | 0.827246 | 1.739028e-54 | -8.615850e-47 |
| Msa0106670 | Msa0345970 | 0.800370 | 1.488044e-48 | -8.615850e-47 |
| Msa0106670 | Msa0350990 | 0.817402 | 3.360420e-52 | -8.615850e-47 |
| Msa0106670 | Msa0351030 | 0.819495 | 1.127194e-52 | -8.615850e-47 |
| Msa0106670 | Msa0351100 | 0.809344 | 1.981767e-50 | -8.615850e-47 |
| Msa0106670 | Msa0358170 | 0.814989 | 1.162975e-51 | -8.615850e-47 |
| Msa0106670 | Msa0372660 | 0.804435 | 2.163774e-49 | -8.615850e-47 |
| Msa0106670 | Msa0373930 | 0.814789 | 1.288186e-51 | -8.615850e-47 |
| Msa0106670 | Msa0378080 | 0.813023 | 3.156699e-51 | -8.615850e-47 |
| Msa0106670 | Msa0380040 | 0.808813 | 2.576041e-50 | -8.615850e-47 |
| Msa0106670 | Msa0404030 | 0.802165 | 6.385423e-49 | -8.615850e-47 |
| Msa0106670 | Msa0405370 | 0.830730 | 2.490782e-55 | -8.615850e-47 |
| Msa0106670 | Msa0406880 | 0.802813 | 4.695187e-49 | -8.615850e-47 |
| Msa0106670 | Msa0419820 | 0.800836 | 1.195775e-48 | -8.615850e-47 |
| Msa0106670 | Msa0421780 | -0.802369 | 5.797574e-49 | -8.615850e-47 |
| Msa0106670 | Msa0429290 | 0.809896 | 1.508636e-50 | -8.615850e-47 |
| Msa0106670 | Msa0432770 | 0.808041 | 3.762374e-50 | -8.615850e-47 |
| Msa0106670 | Msa0433640 | 0.801418 | 9.089310e-49 | -8.615850e-47 |
| Msa0106670 | Msa0442200 | 0.802292 | 6.012678e-49 | -8.615850e-47 |
| Msa0106670 | Msa0442850 | 0.832979 | 6.938759e-56 | -8.615850e-47 |
| Msa0106670 | Msa0446580 | 0.801971 | 7.000311e-49 | -8.615850e-47 |
| Msa0106670 | Msa0465790 | 0.815204 | 1.042328e-51 | -8.615850e-47 |
| Msa0106670 | Msa0466390 | 0.828744 | 7.584653e-55 | -8.615850e-47 |
| Msa0106670 | Msa0467900 | -0.802087 | 6.626914e-49 | -8.615850e-47 |
| Msa0106670 | Msa0467960 | -0.806014 | 1.010457e-49 | -8.615850e-47 |
| Msa0106670 | Msa0468130 | 0.802412 | 5.678616e-49 | -8.615850e-47 |
| Msa0106670 | Msa0475580 | 0.809389 | 1.938154e-50 | -8.615850e-47 |
| Msa0106670 | Msa0480980 | 0.821930 | 3.107382e-53 | -8.615850e-47 |
| Msa0106670 | Msa0483850 | 0.804633 | 1.966921e-49 | -8.615850e-47 |
| Msa0106670 | Msa0484780 | 0.809407 | 1.920932e-50 | -8.615850e-47 |
| Msa0106670 | Msa0500360 | 0.807219 | 5.624371e-50 | -8.615850e-47 |
| Msa0106670 | Msa0504020 | 0.802675 | 5.014153e-49 | -8.615850e-47 |
| Msa0106670 | Msa0518040 | 0.802175 | 6.355886e-49 | -8.615850e-47 |
| Msa0106670 | Msa0519000 | 0.822451 | 2.352050e-53 | -8.615850e-47 |
| Msa0106670 | Msa0519220 | 0.808163 | 3.545377e-50 | -8.615850e-47 |
| Msa0106670 | Msa0529890 | 0.807883 | 4.066089e-50 | -8.615850e-47 |
| Msa0106670 | Msa0535060 | 0.802329 | 5.907033e-49 | -8.615850e-47 |
| Msa0106670 | Msa0550430 | 0.801539 | 8.583744e-49 | -8.615850e-47 |
| Msa0106670 | Msa0553220 | -0.825747 | 3.959881e-54 | -8.615850e-47 |
| Msa0106670 | Msa0563840 | 0.804881 | 1.745754e-49 | -8.615850e-47 |
| Msa0106670 | Msa0571700 | 0.800877 | 1.172917e-48 | -8.615850e-47 |
| Msa0106670 | Msa0577500 | 0.802173 | 6.362425e-49 | -8.615850e-47 |
| Msa0106670 | Msa0585000 | -0.829273 | 5.646418e-55 | -8.615850e-47 |
| Msa0106670 | Msa0591770 | 0.800173 | 1.631746e-48 | -8.615850e-47 |
| Msa0106670 | Msa0592440 | 0.806578 | 7.685623e-50 | -8.615850e-47 |
| Msa0106670 | Msa0598460 | 0.809649 | 1.705028e-50 | -8.615850e-47 |
| Msa0106670 | Msa0601850 | 0.809319 | 2.006769e-50 | -8.615850e-47 |
| Msa0106670 | Msa0610430 | 0.827982 | 1.158079e-54 | -8.615850e-47 |
| Msa0106670 | Msa0618010 | 0.806202 | 9.221817e-50 | -8.615850e-47 |
| Msa0106670 | Msa0620960 | 0.801440 | 8.993426e-49 | -8.615850e-47 |
| Msa0106670 | Msa0621590 | 0.813564 | 2.401953e-51 | -8.615850e-47 |
| Msa0106670 | Msa0625720 | 0.805703 | 1.174632e-49 | -8.615850e-47 |
| Msa0106670 | Msa0633400 | 0.800730 | 1.256582e-48 | -8.615850e-47 |
| Msa0106670 | Msa0633840 | 0.816169 | 6.351567e-52 | -8.615850e-47 |
| Msa0106670 | Msa0638280 | 0.826794 | 2.230993e-54 | -8.615850e-47 |
| Msa0106670 | Msa0638320 | 0.836498 | 9.035821e-57 | -8.615850e-47 |
| Msa0106670 | Msa0647450 | -0.817545 | 3.119619e-52 | -8.615850e-47 |
| Msa0106670 | Msa0661190 | -0.810192 | 1.302654e-50 | -8.615850e-47 |
| Msa0106670 | Msa0663380 | 0.809329 | 1.997160e-50 | -8.615850e-47 |
| Msa0106670 | Msa0663390 | 0.801697 | 7.966292e-49 | -8.615850e-47 |
| Msa0106670 | Msa0663920 | 0.808053 | 3.741083e-50 | -8.615850e-47 |
| Msa0106670 | Msa0669440 | 0.802983 | 4.330656e-49 | -8.615850e-47 |
| Msa0106670 | Msa0673460 | 0.809905 | 1.501639e-50 | -8.615850e-47 |
| Msa0106670 | Msa0677270 | 0.831968 | 1.235352e-55 | -8.615850e-47 |
| Msa0106670 | Msa0692830 | 0.808442 | 3.091291e-50 | -8.615850e-47 |
| Msa0106670 | Msa0692950 | 0.807598 | 4.674457e-50 | -8.615850e-47 |
| Msa0106670 | Msa0693380 | 0.814015 | 1.910821e-51 | -8.615850e-47 |
| Msa0106670 | Msa0709500 | 0.826216 | 3.063296e-54 | -8.615850e-47 |
| Msa0106670 | Msa0715700 | 0.807160 | 5.788953e-50 | -8.615850e-47 |
| Msa0106670 | Msa0716840 | 0.830199 | 3.360293e-55 | -8.615850e-47 |
| Msa0106670 | Msa0724830 | 0.807400 | 5.150025e-50 | -8.615850e-47 |
| Msa0106670 | Msa0743260 | 0.801560 | 8.501426e-49 | -8.615850e-47 |
| Msa0106670 | Msa0743720 | 0.811321 | 7.422357e-51 | -8.615850e-47 |
| Msa0106670 | Msa0745790 | 0.803139 | 4.019366e-49 | -8.615850e-47 |
| Msa0106670 | Msa0756630 | -0.809920 | 1.490850e-50 | -8.615850e-47 |
| Msa0106670 | Msa0765380 | 0.806292 | 8.830995e-50 | -8.615850e-47 |
| Msa0106670 | Msa0771720 | 0.817212 | 3.706980e-52 | -8.615850e-47 |
| Msa0106670 | Msa0773840 | 0.822455 | 2.346900e-53 | -8.615850e-47 |
| Msa0106670 | Msa0777230 | 0.813314 | 2.724856e-51 | -8.615850e-47 |
| Msa0106670 | Msa0790850 | 0.827035 | 1.953740e-54 | -8.615850e-47 |
| Msa0106670 | Msa0794670 | 0.802988 | 4.319745e-49 | -8.615850e-47 |
| Msa0106670 | Msa0795090 | 0.815435 | 9.261044e-52 | -8.615850e-47 |
| Msa0106670 | Msa0808270 | 0.800397 | 1.469255e-48 | -8.615850e-47 |
| Msa0106670 | Msa0813720 | 0.813513 | 2.464330e-51 | -8.615850e-47 |
| Msa0106670 | Msa0816700 | 0.812883 | 3.388097e-51 | -8.615850e-47 |
| Msa0106670 | Msa0820850 | 0.804480 | 2.116807e-49 | -8.615850e-47 |
| Msa0106670 | Msa0824680 | 0.811228 | 7.775102e-51 | -8.615850e-47 |
| Msa0106670 | Msa0827040 | 0.825416 | 4.745218e-54 | -8.615850e-47 |
| Msa0106670 | Msa0849030 | 0.804997 | 1.651082e-49 | -8.615850e-47 |
| Msa0106670 | Msa0861130 | 0.801543 | 8.568175e-49 | -8.615850e-47 |
| Msa0106670 | Msa0876200 | 0.801470 | 8.867359e-49 | -8.615850e-47 |
| Msa0106670 | Msa0880140 | 0.810094 | 1.367359e-50 | -8.615850e-47 |
| Msa0106670 | Msa0923330 | 0.810126 | 1.345684e-50 | -8.615850e-47 |
| Msa0106670 | Msa0938220 | 0.802090 | 6.615161e-49 | -8.615850e-47 |
| Msa0106670 | Msa0942070 | 0.800898 | 1.161412e-48 | -8.615850e-47 |
| Msa0106670 | Msa0959360 | 0.819932 | 8.958260e-53 | -8.615850e-47 |
| Msa0106670 | Msa0968680 | 0.821186 | 4.616021e-53 | -8.615850e-47 |
| Msa0106670 | Msa0970420 | 0.807651 | 4.554700e-50 | -8.615850e-47 |
| Msa0106670 | Msa0974070 | 0.807826 | 4.181394e-50 | -8.615850e-47 |
| Msa0106670 | Msa0979100 | 0.802522 | 5.389917e-49 | -8.615850e-47 |
| Msa0106670 | Msa0982270 | 0.807306 | 5.389951e-50 | -8.615850e-47 |
| Msa0106670 | Msa1003620 | 0.811089 | 8.333899e-51 | -8.615850e-47 |
| Msa0106670 | Msa1014540 | 0.838229 | 3.254721e-57 | -8.615850e-47 |
| Msa0106670 | Msa1021540 | 0.802184 | 6.329353e-49 | -8.615850e-47 |
| Msa0106670 | Msa1026760 | 0.800457 | 1.428611e-48 | -8.615850e-47 |
| Msa0106670 | Msa1037700 | -0.804611 | 1.988260e-49 | -8.615850e-47 |
| Msa0106670 | Msa1046020 | 0.812969 | 3.244191e-51 | -8.615850e-47 |
| Msa0106670 | Msa1046060 | 0.816254 | 6.080045e-52 | -8.615850e-47 |
| Msa0106670 | Msa1046460 | 0.805158 | 1.528001e-49 | -8.615850e-47 |
| Msa0106670 | Msa1051200 | 0.821631 | 3.644559e-53 | -8.615850e-47 |
| Msa0106670 | Msa1075220 | -0.811992 | 5.305376e-51 | -8.615850e-47 |
| Msa0106670 | Msa1082500 | 0.831758 | 1.391812e-55 | -8.615850e-47 |
| Msa0106670 | Msa1084470 | 0.804524 | 2.072760e-49 | -8.615850e-47 |
| Msa0106670 | Msa1085300 | 0.801144 | 1.034288e-48 | -8.615850e-47 |
| Msa0106670 | Msa1090260 | 0.826479 | 2.653110e-54 | -8.615850e-47 |
| Msa0106670 | Msa1113170 | 0.800307 | 1.532639e-48 | -8.615850e-47 |
| Msa0106670 | Msa1115430 | 0.802262 | 6.097581e-49 | -8.615850e-47 |
| Msa0106670 | Msa1116130 | -0.817153 | 3.821860e-52 | -8.615850e-47 |
| Msa0106670 | Msa1125760 | 0.816623 | 5.027477e-52 | -8.615850e-47 |
| Msa0106670 | Msa1131220 | 0.811608 | 6.430546e-51 | -8.615850e-47 |
| Msa0106670 | Msa1137600 | 0.804230 | 2.386636e-49 | -8.615850e-47 |
| Msa0106670 | Msa1137700 | 0.806231 | 9.097108e-50 | -8.615850e-47 |
| Msa0106670 | Msa1143930 | -0.837713 | 4.419364e-57 | -8.615850e-47 |
| Msa0106670 | Msa1162550 | -0.803093 | 4.109267e-49 | -8.615850e-47 |
| Msa0106670 | Msa1171360 | 0.825351 | 4.914961e-54 | -8.615850e-47 |
| Msa0106670 | Msa1171870 | 0.815518 | 8.875477e-52 | -8.615850e-47 |
| Msa0106670 | Msa1186950 | -0.825984 | 3.479072e-54 | -8.615850e-47 |
| Msa0106670 | Msa1187520 | 0.805386 | 1.368634e-49 | -8.615850e-47 |
| Msa0106670 | Msa1197410 | 0.804300 | 2.308266e-49 | -8.615850e-47 |
| Msa0106670 | Msa1199220 | 0.810259 | 1.260133e-50 | -8.615850e-47 |
| Msa0106670 | Msa1199560 | 0.826195 | 3.098514e-54 | -8.615850e-47 |
| Msa0106670 | Msa1205130 | 0.802200 | 6.281348e-49 | -8.615850e-47 |
| Msa0106670 | Msa1217430 | -0.817816 | 2.710327e-52 | -8.615850e-47 |
| Msa0106670 | Msa1217830 | 0.833183 | 6.171726e-56 | -8.615850e-47 |
| Msa0106670 | Msa1224810 | 0.802716 | 4.915555e-49 | -8.615850e-47 |
| Msa0106670 | Msa1228620 | -0.806520 | 7.904063e-50 | -8.615850e-47 |
| Msa0106670 | Msa1233500 | 0.826689 | 2.363603e-54 | -8.615850e-47 |
| Msa0106670 | Msa1233890 | 0.851413 | 9.020921e-61 | -8.615850e-47 |
| Msa0106670 | Msa1247250 | 0.813550 | 2.418554e-51 | -8.615850e-47 |
| Msa0106670 | Msa1250890 | 0.812713 | 3.691667e-51 | -8.615850e-47 |
| Msa0106670 | Msa1253020 | 0.815049 | 1.128154e-51 | -8.615850e-47 |
| Msa0106670 | Msa1264020 | 0.803820 | 2.904103e-49 | -8.615850e-47 |
| Msa0106670 | Msa1271210 | 0.809763 | 1.611402e-50 | -8.615850e-47 |
| Msa0106670 | Msa1275360 | 0.807677 | 4.497187e-50 | -8.615850e-47 |
| Msa0106670 | Msa1277660 | 0.812282 | 4.585193e-51 | -8.615850e-47 |
| Msa0106670 | Msa1279210 | 0.825731 | 3.995457e-54 | -8.615850e-47 |
| Msa0106670 | Msa1282920 | 0.801564 | 8.485719e-49 | -8.615850e-47 |
| Msa0106670 | Msa1284680 | 0.805040 | 1.617307e-49 | -8.615850e-47 |
| Msa0106670 | Msa1288420 | 0.802832 | 4.652105e-49 | -8.615850e-47 |
| Msa0106670 | Msa1289010 | 0.809252 | 2.074661e-50 | -8.615850e-47 |
| Msa0106670 | Msa1295450 | 0.804661 | 1.940730e-49 | -8.615850e-47 |
| Msa0106670 | Msa1300350 | -0.806681 | 7.308368e-50 | -8.615850e-47 |
| Msa0106670 | Msa1302190 | -0.837092 | 6.374046e-57 | -8.615850e-47 |
| Msa0106670 | Msa1305190 | 0.811180 | 7.964537e-51 | -8.615850e-47 |
| Msa0106670 | Msa1305340 | 0.828880 | 7.028251e-55 | -8.615850e-47 |
| Msa0106670 | Msa1306430 | 0.814070 | 1.857806e-51 | -8.615850e-47 |
| Msa0106670 | Msa1306860 | 0.804030 | 2.627224e-49 | -8.615850e-47 |
| Msa0106670 | Msa1314340 | 0.808050 | 3.746198e-50 | -8.615850e-47 |
| Msa0106670 | Msa1322190 | 0.817518 | 3.162808e-52 | -8.615850e-47 |
| Msa0106670 | Msa1328700 | 0.829960 | 3.841503e-55 | -8.615850e-47 |
| Msa0106670 | Msa1351620 | 0.824418 | 8.158215e-54 | -8.615850e-47 |
| Msa0106670 | Msa1357530 | 0.801736 | 7.820669e-49 | -8.615850e-47 |
| Msa0106670 | Msa1359040 | 0.829625 | 4.634940e-55 | -8.615850e-47 |
| Msa0106670 | Msa1362880 | 0.812311 | 4.520228e-51 | -8.615850e-47 |
| Msa0106670 | Msa1367080 | 0.809867 | 1.530331e-50 | -8.615850e-47 |
| Msa0106670 | Msa1369530 | 0.807491 | 4.924285e-50 | -8.615850e-47 |
| Msa0106670 | Msa1372760 | 0.808789 | 2.606572e-50 | -8.615850e-47 |
| Msa0106670 | Msa1386780 | 0.814011 | 1.914577e-51 | -8.615850e-47 |
| Msa0106670 | Msa1410100 | 0.829963 | 3.834876e-55 | -8.615850e-47 |
| Msa0106670 | Msa1419800 | -0.819199 | 1.316727e-52 | -8.615850e-47 |
| Msa0106670 | Msa1425010 | 0.808164 | 3.543461e-50 | -8.615850e-47 |
| Msa0106670 | Msa1426030 | 0.805859 | 1.089162e-49 | -8.615850e-47 |
| Msa0106670 | Msa1427230 | 0.804669 | 1.933407e-49 | -8.615850e-47 |
| Msa0106670 | Msa1427830 | 0.809464 | 1.868139e-50 | -8.615850e-47 |
| Msa0106670 | Msa1430680 | 0.821652 | 3.602598e-53 | -8.615850e-47 |
| Msa0106670 | Msa1435370 | 0.801250 | 9.839210e-49 | -8.615850e-47 |
| Msa0106670 | Msa1440000 | 0.834561 | 2.791628e-56 | -8.615850e-47 |
| Msa0106670 | Msa1441190 | 0.827760 | 1.309461e-54 | -8.615850e-47 |
| Msa0106670 | Msa1451620 | -0.801267 | 9.761842e-49 | -8.615850e-47 |
| Msa0106670 | Msa1455490 | 0.802806 | 4.711131e-49 | -8.615850e-47 |
| Msa0106670 | Msa1460830 | 0.809134 | 2.199083e-50 | -8.615850e-47 |
| Msa0106670 | Msa1464830 | 0.800652 | 1.303326e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106670 | MtrunA17_Chr1g0162731 | 99.061 | 213 | 2 | 0 | 1 | 213 | 1 | 213 | 2.54e-159 | 438 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106670 | AT4G28830.4 | 76.585 | 205 | 48 | 0 | 1 | 205 | 1 | 205 | 3.47e-115 | 327 |
| Msa0106670 | AT4G28830.3 | 76.585 | 205 | 48 | 0 | 1 | 205 | 1 | 205 | 3.47e-115 | 327 |
| Msa0106670 | AT4G28830.1 | 76.585 | 205 | 48 | 0 | 1 | 205 | 1 | 205 | 3.47e-115 | 327 |
| Msa0106670 | AT4G28830.2 | 73.248 | 157 | 42 | 0 | 1 | 157 | 1 | 157 | 1.58e-79 | 235 |
Find 47 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGAAATTTGTACAATTT+TGG | 0.138898 | 1_3:-16252116 | None:intergenic |
| TCCATTTGGAACTCGGAAAA+AGG | 0.203776 | 1_3:+16251027 | Msa0106670:CDS |
| TGAACTGTGAATCTCCTTAA+AGG | 0.229281 | 1_3:+16252438 | Msa0106670:three_prime_UTR |
| TCATGAGCACTTGTTAGATT+TGG | 0.240313 | 1_3:+16252282 | Msa0106670:three_prime_UTR |
| GATGCTATTTCAAGAGATTC+TGG | 0.249680 | 1_3:-16249781 | None:intergenic |
| CAATCTTTGGTTGAGGGAAT+TGG | 0.296999 | 1_3:-16245132 | None:intergenic |
| CATGAGCACTTGTTAGATTT+GGG | 0.300667 | 1_3:+16252283 | Msa0106670:three_prime_UTR |
| GGCAAGAATTAAAATAATTA+AGG | 0.305629 | 1_3:+16252459 | Msa0106670:three_prime_UTR |
| GGATGTGGTTGTGGTACTTT+AGG | 0.308636 | 1_3:+16246926 | Msa0106670:CDS |
| CCTCTGCTTTGATGACTTCC+AGG | 0.317088 | 1_3:-16252182 | None:intergenic |
| TATTGTTCAAGCTCAATCTT+TGG | 0.321728 | 1_3:-16245145 | None:intergenic |
| TATCTTCTTCACCATTTCTC+TGG | 0.361958 | 1_3:+16245058 | Msa0106670:five_prime_UTR |
| CACATCATCAAAAGAATTCT+CGG | 0.368740 | 1_3:-16246879 | None:intergenic |
| TGACAGTGGCGGTGAAAGTT+TGG | 0.374829 | 1_3:+16245020 | Msa0106670:five_prime_UTR |
| ATGTGAAACGTGCAGCCTTA+AGG | 0.383244 | 1_3:+16251784 | Msa0106670:CDS |
| GTTATTATGAATCCTCCATT+TGG | 0.396477 | 1_3:+16251013 | Msa0106670:CDS |
| TGTGAAACGTGCAGCCTTAA+GGG | 0.405820 | 1_3:+16251785 | Msa0106670:CDS |
| ATAATAACTGTATCAACAAC+TGG | 0.412753 | 1_3:-16250998 | None:intergenic |
| AAACTTACTCTGCACTCAAA+AGG | 0.421281 | 1_3:-16246961 | None:intergenic |
| TCTAGCATTGAAATCCCTTA+AGG | 0.427352 | 1_3:-16251799 | None:intergenic |
| CAAGCTCAATCTTTGGTTGA+GGG | 0.432977 | 1_3:-16245138 | None:intergenic |
| TAGATATTGCTGTTGATCTC+TGG | 0.436044 | 1_3:+16252150 | Msa0106670:CDS |
| GCTGACTTTGGATGTGGTTG+TGG | 0.455958 | 1_3:+16246917 | Msa0106670:CDS |
| TGAATCCTCCATTTGGAACT+CGG | 0.476716 | 1_3:+16251020 | Msa0106670:CDS |
| GTTGAGCACAATTATAAAAG+AGG | 0.477951 | 1_3:-16252311 | None:intergenic |
| ACCTAAACTGCAGCTGGACA+TGG | 0.502459 | 1_3:+16250084 | Msa0106670:intron |
| CTAATATCATGGACTTGAGA+TGG | 0.504121 | 1_3:+16250119 | Msa0106670:CDS |
| GAGCTTGAACAATACCCAAC+TGG | 0.504459 | 1_3:+16245154 | Msa0106670:CDS |
| ATGAAACTGAAAGAGTTAGA+AGG | 0.514164 | 1_3:+16245091 | Msa0106670:CDS |
| AACTTACTCTGCACTCAAAA+GGG | 0.515377 | 1_3:-16246960 | None:intergenic |
| CAAATTTCATAAGAAGAAAG+AGG | 0.523581 | 1_3:+16252127 | Msa0106670:CDS |
| TCAAGCTCAATCTTTGGTTG+AGG | 0.533527 | 1_3:-16245139 | None:intergenic |
| AACAAAGTAGTAGCTGACTT+TGG | 0.540597 | 1_3:+16246905 | Msa0106670:CDS |
| AAGCGATGTGAGGTCCAGTT+GGG | 0.548808 | 1_3:-16245168 | None:intergenic |
| GAAGCGATGTGAGGTCCAGT+TGG | 0.553995 | 1_3:-16245169 | None:intergenic |
| TCTTAATGCTGAGGAACTTG+AGG | 0.577969 | 1_3:+16249804 | Msa0106670:CDS |
| GTAGTAGCTGACTTTGGATG+TGG | 0.589321 | 1_3:+16246911 | Msa0106670:CDS |
| TAGTGTAGACAGAATTTGTG+TGG | 0.602392 | 1_3:+16252209 | Msa0106670:exon |
| ATCATGGACTTGAGATGGAG+AGG | 0.614395 | 1_3:+16250124 | Msa0106670:CDS |
| AAAGAGTTAGAAGGTCACCT+TGG | 0.624787 | 1_3:+16245100 | Msa0106670:CDS |
| AATAGCATCTCTTAATGCTG+AGG | 0.626732 | 1_3:+16249795 | Msa0106670:CDS |
| CCTGGAAGTCATCAAAGCAG+AGG | 0.663564 | 1_3:+16252182 | Msa0106670:CDS |
| AGCATACGAGAAGCGATGTG+AGG | 0.677746 | 1_3:-16245178 | None:intergenic |
| AGCACTAAAAGTAGTGACAG+TGG | 0.694374 | 1_3:+16245006 | Msa0106670:five_prime_UTR |
| GGAATTGGTCGAGAGAACCA+AGG | 0.704393 | 1_3:-16245117 | None:intergenic |
| AAGTGCTGAAGTTATCTGTG+AGG | 0.734323 | 1_3:+16251821 | Msa0106670:CDS |
| ACTAAAAGTAGTGACAGTGG+CGG | 0.754874 | 1_3:+16245009 | Msa0106670:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTAAACTTCTTTA+TGG | - | chr1_3:16248025-16248044 | None:intergenic | 10.0% |
| !! | AGAAATAAAAGTTTATATTT+CGG | - | chr1_3:16248091-16248110 | None:intergenic | 10.0% |
| !! | AAAATGATATTACATATAAA+TGG | + | chr1_3:16248836-16248855 | Msa0106670:intron | 10.0% |
| !!! | ATTATAATTTATTTTTTCAG+GGG | + | chr1_3:16249193-16249212 | Msa0106670:intron | 10.0% |
| !! | AACAAAAATACAAAATATAT+TGG | - | chr1_3:16251314-16251333 | None:intergenic | 10.0% |
| !! | TAAAAAGTAAAATCTATTAA+CGG | + | chr1_3:16251490-16251509 | Msa0106670:intron | 10.0% |
| !! | GAATAATCATATATTATTGA+AGG | - | chr1_3:16245326-16245345 | None:intergenic | 15.0% |
| !!! | ATGATTATTCTTTTTCTTTT+TGG | + | chr1_3:16245336-16245355 | Msa0106670:intron | 15.0% |
| !! | AAAATCTTCAAAAGAATATA+TGG | - | chr1_3:16245837-16245856 | None:intergenic | 15.0% |
| !!! | AAAATTAATTACACTTGTTA+TGG | - | chr1_3:16246212-16246231 | None:intergenic | 15.0% |
| !!! | TAACAAGTGTAATTAATTTT+TGG | + | chr1_3:16246212-16246231 | Msa0106670:intron | 15.0% |
| !!! | TATTTTATACAATCTACAAA+AGG | + | chr1_3:16247115-16247134 | Msa0106670:intron | 15.0% |
| !!! | ATTGTAAGTATTTTTGAAAT+GGG | - | chr1_3:16247938-16247957 | None:intergenic | 15.0% |
| !!! | AATTGTAAGTATTTTTGAAA+TGG | - | chr1_3:16247939-16247958 | None:intergenic | 15.0% |
| !! | GAAATAAAAGTTTATATTTC+GGG | - | chr1_3:16248090-16248109 | None:intergenic | 15.0% |
| !! | AGAACAGTTTAATAATTTAT+TGG | + | chr1_3:16248127-16248146 | Msa0106670:intron | 15.0% |
| !! | GAACAGTTTAATAATTTATT+GGG | + | chr1_3:16248128-16248147 | Msa0106670:intron | 15.0% |
| !! | AACAGTTTAATAATTTATTG+GGG | + | chr1_3:16248129-16248148 | Msa0106670:intron | 15.0% |
| !!! | ATTGTTAATTTTTTTACTAG+TGG | + | chr1_3:16248560-16248579 | Msa0106670:intron | 15.0% |
| !! | GCAATATAAATAAGAAAAAT+AGG | - | chr1_3:16248710-16248729 | None:intergenic | 15.0% |
| !! | TAAAAAAATATTGTCAAAGT+AGG | + | chr1_3:16249249-16249268 | Msa0106670:intron | 15.0% |
| !!! | TTTTATTCAATCTAATATCA+TGG | + | chr1_3:16250108-16250127 | Msa0106670:CDS | 15.0% |
| !!! | AACTAGTATTTTATATGATA+TGG | - | chr1_3:16250310-16250329 | None:intergenic | 15.0% |
| !! | AAATATTAACTCTTGAAAAA+TGG | - | chr1_3:16250363-16250382 | None:intergenic | 15.0% |
| !!! | TTTTATAAATCTGTAACAAA+CGG | - | chr1_3:16251459-16251478 | None:intergenic | 15.0% |
| !! | TTTAAAAGTGATTTATATCA+TGG | + | chr1_3:16251573-16251592 | Msa0106670:intron | 15.0% |
| !!! | GAAATTTGATATTTTTTGTA+TGG | + | chr1_3:16252070-16252089 | Msa0106670:intron | 15.0% |
| !!! | TTATGAAATTTGTACAATTT+TGG | - | chr1_3:16252119-16252138 | None:intergenic | 15.0% |
| !!! | ATTTTGTAGTACTTTGTTAA+TGG | + | chr1_3:16245280-16245299 | Msa0106670:intron | 20.0% |
| !!! | TTTTGTAGTACTTTGTTAAT+GGG | + | chr1_3:16245281-16245300 | Msa0106670:intron | 20.0% |
| !! | TCATAGATCAATATAAACAA+GGG | - | chr1_3:16245780-16245799 | None:intergenic | 20.0% |
| !! | TTCATAGATCAATATAAACA+AGG | - | chr1_3:16245781-16245800 | None:intergenic | 20.0% |
| !! | GATGTCATATATTTAATCTA+TGG | - | chr1_3:16245942-16245961 | None:intergenic | 20.0% |
| !! | AAACATTTATACATTCACAT+GGG | - | chr1_3:16246446-16246465 | None:intergenic | 20.0% |
| !! | ATTTGCAAATAATAAGCTTA+TGG | + | chr1_3:16246765-16246784 | Msa0106670:intron | 20.0% |
| !! | ATTTACATAGCATAAAGTAA+AGG | - | chr1_3:16247042-16247061 | None:intergenic | 20.0% |
| !!! | ACTATAATGACATTGATTAT+AGG | + | chr1_3:16247072-16247091 | Msa0106670:intron | 20.0% |
| !!! | TGATGATGTAGATTATTTAA+AGG | - | chr1_3:16247242-16247261 | None:intergenic | 20.0% |
| !!! | TTGTAAGTATTTTTGAAATG+GGG | - | chr1_3:16247937-16247956 | None:intergenic | 20.0% |
| !! | TTGTGTATATAACAACATAT+TGG | - | chr1_3:16248530-16248549 | None:intergenic | 20.0% |
| !!! | AGCAATTGTTATTTTTATGT+TGG | + | chr1_3:16250023-16250042 | Msa0106670:intron | 20.0% |
| !!! | TGAAGCATAACTAATATTTT+TGG | + | chr1_3:16250211-16250230 | Msa0106670:intron | 20.0% |
| !!! | TATAAAATACTAGTTGATGA+TGG | + | chr1_3:16250315-16250334 | Msa0106670:intron | 20.0% |
| !!! | ATAAAATACTAGTTGATGAT+GGG | + | chr1_3:16250316-16250335 | Msa0106670:intron | 20.0% |
| !! | TATTGTATTGTATTGTATGA+AGG | + | chr1_3:16250769-16250788 | Msa0106670:intron | 20.0% |
| !!! | TTTTTATAGACAAATGTTAG+TGG | - | chr1_3:16250835-16250854 | None:intergenic | 20.0% |
| !!! | AAAAAATGCATGTTATTTAC+TGG | + | chr1_3:16250850-16250869 | Msa0106670:intron | 20.0% |
| !! | TTAATAAGATATGATCATCT+TGG | + | chr1_3:16250961-16250980 | Msa0106670:intron | 20.0% |
| !!! | TTCCATATTTTTGTTTCATT+AGG | + | chr1_3:16251157-16251176 | Msa0106670:intron | 20.0% |
| !! | AACCTAATGAAACAAAAATA+TGG | - | chr1_3:16251162-16251181 | None:intergenic | 20.0% |
| !!! | GTATTTTTGTTTTCAGTTAT+TGG | + | chr1_3:16251323-16251342 | Msa0106670:intron | 20.0% |
| !! | CAAATATTAACATTTACCAA+AGG | - | chr1_3:16251883-16251902 | None:intergenic | 20.0% |
| !!! | TTGATATTTTTTGTATGGTT+TGG | + | chr1_3:16252075-16252094 | Msa0106670:intron | 20.0% |
| !!! | TAGTAAGAGTTTTGTAAAAA+AGG | + | chr1_3:16252393-16252412 | Msa0106670:three_prime_UTR | 20.0% |
| !!! | TATTTTAATTCTTGCCTTTA+AGG | - | chr1_3:16252455-16252474 | None:intergenic | 20.0% |
| !! | GGCAAGAATTAAAATAATTA+AGG | + | chr1_3:16252459-16252478 | Msa0106670:three_prime_UTR | 20.0% |
| ! | TACAAAATGAAGATGGAATA+AGG | - | chr1_3:16245268-16245287 | None:intergenic | 25.0% |
| !! | AAAGTACTACAAAATGAAGA+TGG | - | chr1_3:16245275-16245294 | None:intergenic | 25.0% |
| !! | TTTGTGCTTTGATAATCATA+TGG | + | chr1_3:16245621-16245640 | Msa0106670:intron | 25.0% |
| ! | CTAAAACTAACTAACACAAT+CGG | + | chr1_3:16245693-16245712 | Msa0106670:intron | 25.0% |
| ! | TAAAACTAACTAACACAATC+GGG | + | chr1_3:16245694-16245713 | Msa0106670:intron | 25.0% |
| !!! | TTCACATCAGTTTTAATTCA+AGG | + | chr1_3:16245735-16245754 | Msa0106670:intron | 25.0% |
| ! | GATTAAATATATGACATCCT+AGG | + | chr1_3:16245944-16245963 | Msa0106670:intron | 25.0% |
| ! | GGAAATATTCTTTCAAATCA+GGG | - | chr1_3:16246105-16246124 | None:intergenic | 25.0% |
| ! | AGGAAATATTCTTTCAAATC+AGG | - | chr1_3:16246106-16246125 | None:intergenic | 25.0% |
| !!! | TAATTTTTGGTACGTAGAAA+TGG | + | chr1_3:16246225-16246244 | Msa0106670:intron | 25.0% |
| ! | TGTTATATACATAGTATGAC+AGG | + | chr1_3:16246312-16246331 | Msa0106670:intron | 25.0% |
| ! | GAAACATTTATACATTCACA+TGG | - | chr1_3:16246447-16246466 | None:intergenic | 25.0% |
| ! | ATTTACTGGAAAAAATGTTG+CGG | - | chr1_3:16246469-16246488 | None:intergenic | 25.0% |
| ! | ATGAAGTTTGAATACTTACT+AGG | + | chr1_3:16246532-16246551 | Msa0106670:intron | 25.0% |
| ! | ATAAAATGAAAACCTTCCAT+AGG | - | chr1_3:16246669-16246688 | None:intergenic | 25.0% |
| !! | TATGGAAGGTTTTCATTTTA+TGG | + | chr1_3:16246668-16246687 | Msa0106670:intron | 25.0% |
| !! | TTCATTTTATGGTTGAGATT+AGG | + | chr1_3:16246679-16246698 | Msa0106670:intron | 25.0% |
| !! | TCATTTTATGGTTGAGATTA+GGG | + | chr1_3:16246680-16246699 | Msa0106670:intron | 25.0% |
| ! | ATTGTAGAAAATCAATCCAA+TGG | + | chr1_3:16246725-16246744 | Msa0106670:intron | 25.0% |
| !!! | ACAATTGATTTGAGATCTAT+TGG | + | chr1_3:16247191-16247210 | Msa0106670:intron | 25.0% |
| ! | CAGTGTATAATTCAGAAATT+AGG | - | chr1_3:16247363-16247382 | None:intergenic | 25.0% |
| !! | TTGAACTTGGTATTTGATTT+AGG | - | chr1_3:16247658-16247677 | None:intergenic | 25.0% |
| ! | TAAATCAAATACCAAGTTCA+AGG | + | chr1_3:16247657-16247676 | Msa0106670:intron | 25.0% |
| !! | TTGTAAACTCATGATTTTCT+AGG | + | chr1_3:16247841-16247860 | Msa0106670:intron | 25.0% |
| !! | ATATAACAACATATTGGCTA+AGG | - | chr1_3:16248524-16248543 | None:intergenic | 25.0% |
| ! | ACTTGATTGAGTAATAAAAC+TGG | - | chr1_3:16248608-16248627 | None:intergenic | 25.0% |
| !!! | TGGTAATGTTTTTATACTTG+TGG | + | chr1_3:16248748-16248767 | Msa0106670:intron | 25.0% |
| !! | ATATAAGTTGTTGTTCGATT+TGG | - | chr1_3:16249170-16249189 | None:intergenic | 25.0% |
| !! | ACAAAAAAGAGCATACATAT+AGG | - | chr1_3:16249468-16249487 | None:intergenic | 25.0% |
| !! | TTGAACTTGGTATTTGATTT+AGG | - | chr1_3:16247658-16247677 | None:intergenic | 25.0% |
| ! | TAAATCAAATACCAAGTTCA+AGG | + | chr1_3:16247657-16247676 | Msa0106670:intron | 25.0% |
| ! | TAAAATATTACTCGATTGAG+AGG | - | chr1_3:16249693-16249712 | None:intergenic | 25.0% |
| ! | TTGCTCATTATATTGATGAA+TGG | + | chr1_3:16249837-16249856 | Msa0106670:intron | 25.0% |
| !! | ATAAATTCTGACCTTATTTC+TGG | + | chr1_3:16250238-16250257 | Msa0106670:intron | 25.0% |
| ! | ATTAACTCTTGAAAAATGGA+AGG | - | chr1_3:16250359-16250378 | None:intergenic | 25.0% |
| !! | TGTTTTCTATGTATCAAACT+TGG | + | chr1_3:16250407-16250426 | Msa0106670:intron | 25.0% |
| ! | CTAACAACAATATGAAATGA+AGG | + | chr1_3:16250562-16250581 | Msa0106670:intron | 25.0% |
| ! | CAATACAATACAATACAATG+AGG | - | chr1_3:16250749-16250768 | None:intergenic | 25.0% |
| ! | ATAATAACTGTATCAACAAC+TGG | - | chr1_3:16251001-16251020 | None:intergenic | 25.0% |
| ! | TTCAAATGAGTAACTTAGTT+CGG | + | chr1_3:16251258-16251277 | Msa0106670:intron | 25.0% |
| ! | TGTTAAGCTACATAGATTTA+GGG | - | chr1_3:16251701-16251720 | None:intergenic | 25.0% |
| ! | ATCATATAAAAATCAACCCA+TGG | - | chr1_3:16251758-16251777 | None:intergenic | 25.0% |
| ! | TTTGATATTTCGAAGTTCTA+TGG | + | chr1_3:16251909-16251928 | Msa0106670:intron | 25.0% |
| ! | CAAATTTCATAAGAAGAAAG+AGG | + | chr1_3:16252127-16252146 | Msa0106670:CDS | 25.0% |
| !!! | TCGATTTTTTTCCAGAGAAA+TGG | - | chr1_3:16245072-16245091 | None:intergenic | 30.0% |
| ATGAAACTGAAAGAGTTAGA+AGG | + | chr1_3:16245091-16245110 | Msa0106670:CDS | 30.0% | |
| TATTGTTCAAGCTCAATCTT+TGG | - | chr1_3:16245148-16245167 | None:intergenic | 30.0% | |
| ! | AAAGTTTAAAGGGGCATAAA+GGG | - | chr1_3:16245222-16245241 | None:intergenic | 30.0% |
| ! | TAAAGTTTAAAGGGGCATAA+AGG | - | chr1_3:16245223-16245242 | None:intergenic | 30.0% |
| TTGAGCAGTAAAGTTTAAAG+GGG | - | chr1_3:16245231-16245250 | None:intergenic | 30.0% | |
| CTTGAGCAGTAAAGTTTAAA+GGG | - | chr1_3:16245232-16245251 | None:intergenic | 30.0% | |
| ACTTGAGCAGTAAAGTTTAA+AGG | - | chr1_3:16245233-16245252 | None:intergenic | 30.0% | |
| !!! | TCTTTTTGGTGTTAGAAATG+CGG | + | chr1_3:16245350-16245369 | Msa0106670:intron | 30.0% |
| AGCACTTATAGTAGAAAAGA+TGG | + | chr1_3:16245444-16245463 | Msa0106670:intron | 30.0% | |
| ACTTATAGTAGAAAAGATGG+TGG | + | chr1_3:16245447-16245466 | Msa0106670:intron | 30.0% | |
| !!! | TGTTAGTTAGTTTTAGTGTG+CGG | - | chr1_3:16245689-16245708 | None:intergenic | 30.0% |
| TTGAAATTGCAGATGTTAGT+AGG | + | chr1_3:16245905-16245924 | Msa0106670:intron | 30.0% | |
| ! | TATATGACATCCTAGGTTTT+TGG | + | chr1_3:16245951-16245970 | Msa0106670:intron | 30.0% |
| GAGATATCATATGGCAAAAA+TGG | - | chr1_3:16246272-16246291 | None:intergenic | 30.0% | |
| ATGTTCTTGCACAAATTTAC+TGG | - | chr1_3:16246483-16246502 | None:intergenic | 30.0% | |
| AATACTAACTATGTAGTCAG+TGG | + | chr1_3:16246575-16246594 | Msa0106670:intron | 30.0% | |
| TTTGTGCTCTAATAATCCTA+TGG | + | chr1_3:16246650-16246669 | Msa0106670:intron | 30.0% | |
| CACATCATCAAAAGAATTCT+CGG | - | chr1_3:16246882-16246901 | None:intergenic | 30.0% | |
| TAAGTTTCAGCTTTCTTTCT+TGG | + | chr1_3:16246977-16246996 | Msa0106670:intron | 30.0% | |
| AACGTGTATTAGTTAATGCA+GGG | - | chr1_3:16247150-16247169 | None:intergenic | 30.0% | |
| AAACGTGTATTAGTTAATGC+AGG | - | chr1_3:16247151-16247170 | None:intergenic | 30.0% | |
| TATACACTGTTTCACATACA+TGG | + | chr1_3:16247374-16247393 | Msa0106670:intron | 30.0% | |
| ATGCTTTATAAACACTACAC+AGG | - | chr1_3:16247544-16247563 | None:intergenic | 30.0% | |
| TGTGTAGTGTTTATAAAGCA+TGG | + | chr1_3:16247543-16247562 | Msa0106670:intron | 30.0% | |
| ACTCAATATAAAATCCGAGA+CGG | + | chr1_3:16247613-16247632 | Msa0106670:intron | 30.0% | |
| ! | ACTTGGTATTTGATTTAGGA+AGG | - | chr1_3:16247654-16247673 | None:intergenic | 30.0% |
| ! | TGAATTTTCATCCTTGAACT+TGG | - | chr1_3:16247671-16247690 | None:intergenic | 30.0% |
| ! | TTATATTTCGGGTATCAGAA+TGG | - | chr1_3:16248079-16248098 | None:intergenic | 30.0% |
| GAACAATATGAAAGAAAGTG+AGG | + | chr1_3:16248151-16248170 | Msa0106670:intron | 30.0% | |
| AAAGTGAGGTTAAAGTGATT+TGG | + | chr1_3:16248165-16248184 | Msa0106670:intron | 30.0% | |
| TCGAAGGTTTATCCTTTAAT+AGG | - | chr1_3:16248278-16248297 | None:intergenic | 30.0% | |
| AAGTTCGAGAAAATTATCGA+AGG | - | chr1_3:16248294-16248313 | None:intergenic | 30.0% | |
| !! | AGTAATTTGCTTGTTGTGTT+CGG | + | chr1_3:16248326-16248345 | Msa0106670:intron | 30.0% |
| !!! | TCAAGCTTTAGAAGTTTTGT+TGG | + | chr1_3:16248488-16248507 | Msa0106670:intron | 30.0% |
| TTGTTAAACTGCGATATGAA+CGG | + | chr1_3:16249401-16249420 | Msa0106670:intron | 30.0% | |
| ATAGTATACTAGCATGGAAA+TGG | + | chr1_3:16249431-16249450 | Msa0106670:intron | 30.0% | |
| TAGTATACTAGCATGGAAAT+GGG | + | chr1_3:16249432-16249451 | Msa0106670:intron | 30.0% | |
| !!! | TTTTATTTTGTGCTAACCTG+TGG | + | chr1_3:16249487-16249506 | Msa0106670:intron | 30.0% |
| GCACAAAATAAAATATCCAC+AGG | - | chr1_3:16249506-16249525 | None:intergenic | 30.0% | |
| ACCCAATATAAAATCTGAGA+CGG | + | chr1_3:16249571-16249590 | Msa0106670:intron | 30.0% | |
| ! | ACCGTCTCAGATTTTATATT+GGG | - | chr1_3:16249575-16249594 | None:intergenic | 30.0% |
| ! | AACCGTCTCAGATTTTATAT+TGG | - | chr1_3:16249576-16249595 | None:intergenic | 30.0% |
| ! | ACTTGGTATTTGATTTAGGA+AGG | - | chr1_3:16247654-16247673 | None:intergenic | 30.0% |
| ! | TGAATTTTCATCCTTGAACT+TGG | - | chr1_3:16247671-16247690 | None:intergenic | 30.0% |
| TATTGATGAATGGAAGTCTT+AGG | + | chr1_3:16249847-16249866 | Msa0106670:intron | 30.0% | |
| TGATGGTATCATACTATTGA+AGG | - | chr1_3:16250171-16250190 | None:intergenic | 30.0% | |
| CAAAAACTTGAACAATGTGA+TGG | - | chr1_3:16250188-16250207 | None:intergenic | 30.0% | |
| !! | GACCTTATTTCTGGAAATAT+TGG | + | chr1_3:16250247-16250266 | Msa0106670:intron | 30.0% |
| CTCCAATATTTCCAGAAATA+AGG | - | chr1_3:16250252-16250271 | None:intergenic | 30.0% | |
| !! | CTTATTTCTGGAAATATTGG+AGG | + | chr1_3:16250250-16250269 | Msa0106670:intron | 30.0% |
| AATGAAAGCAACATAATCCT+AGG | - | chr1_3:16250468-16250487 | None:intergenic | 30.0% | |
| TTGCTTTCATTCATTGTGTT+TGG | + | chr1_3:16250477-16250496 | Msa0106670:intron | 30.0% | |
| TGCTTTCATTCATTGTGTTT+GGG | + | chr1_3:16250478-16250497 | Msa0106670:intron | 30.0% | |
| AATATGAAATGAAGGCTTAC+TGG | + | chr1_3:16250570-16250589 | Msa0106670:intron | 30.0% | |
| ! | GTGCATATTTTGCTCTTAAT+TGG | + | chr1_3:16250656-16250675 | Msa0106670:intron | 30.0% |
| AGTCTATTATACTCTCAAGT+AGG | - | chr1_3:16250704-16250723 | None:intergenic | 30.0% | |
| TGTATTGTATTGTATGAAGG+AGG | + | chr1_3:16250772-16250791 | Msa0106670:intron | 30.0% | |
| GTTATTATGAATCCTCCATT+TGG | + | chr1_3:16251013-16251032 | Msa0106670:CDS | 30.0% | |
| ATAAACATATGATCTGACTG+AGG | + | chr1_3:16251117-16251136 | Msa0106670:intron | 30.0% | |
| CAGAAAAAACTGTAACAAAC+AGG | - | chr1_3:16251375-16251394 | None:intergenic | 30.0% | |
| !!! | GTTTGTTACAGTTTTTTCTG+TGG | + | chr1_3:16251375-16251394 | Msa0106670:intron | 30.0% |
| CTGTTAAGCTACATAGATTT+AGG | - | chr1_3:16251702-16251721 | None:intergenic | 30.0% | |
| TTTGATATTTCGAAGTCCTT+TGG | + | chr1_3:16251864-16251883 | Msa0106670:intron | 30.0% | |
| TCTGTCAACAATTCTTCAAA+AGG | - | chr1_3:16251980-16251999 | None:intergenic | 30.0% | |
| TTGAAGAATTGTTGACAGAT+TGG | + | chr1_3:16251981-16252000 | Msa0106670:intron | 30.0% | |
| GTTGAGCACAATTATAAAAG+AGG | - | chr1_3:16252314-16252333 | None:intergenic | 30.0% | |
| TATCTTCTTCACCATTTCTC+TGG | + | chr1_3:16245058-16245077 | Msa0106670:five_prime_UTR | 35.0% | |
| !!! | CTTTTTGGTGTTAGAAATGC+GGG | + | chr1_3:16245351-16245370 | Msa0106670:intron | 35.0% |
| ATGACAAAGTTAGAGAGAGT+TGG | + | chr1_3:16245419-16245438 | Msa0106670:intron | 35.0% | |
| TGACAAAGTTAGAGAGAGTT+GGG | + | chr1_3:16245420-16245439 | Msa0106670:intron | 35.0% | |
| GTAAGATAGTCAGAACACTA+TGG | + | chr1_3:16245486-16245505 | Msa0106670:intron | 35.0% | |
| ! | GAACACTATGGTGGAAAATT+TGG | + | chr1_3:16245498-16245517 | Msa0106670:intron | 35.0% |
| TGGTTTATGACAGAACACTA+TGG | + | chr1_3:16245518-16245537 | Msa0106670:intron | 35.0% | |
| ! | CAATGGTAATGTAATGCAAC+AGG | - | chr1_3:16245658-16245677 | None:intergenic | 35.0% |
| GCATTACATTACCATTGAGA+AGG | + | chr1_3:16245661-16245680 | Msa0106670:intron | 35.0% | |
| !! | TTTTGAAGATTTTCTCGCAC+AGG | + | chr1_3:16245844-16245863 | Msa0106670:intron | 35.0% |
| TTGATGTTTGCCAAAAACCT+AGG | - | chr1_3:16245964-16245983 | None:intergenic | 35.0% | |
| GGAGGATATATATCTCAAGA+GGG | - | chr1_3:16246027-16246046 | None:intergenic | 35.0% | |
| AGGAGGATATATATCTCAAG+AGG | - | chr1_3:16246028-16246047 | None:intergenic | 35.0% | |
| GAGATATATATCCTCCTCTA+AGG | + | chr1_3:16246031-16246050 | Msa0106670:intron | 35.0% | |
| AATCAACTTATCCTTAGAGG+AGG | - | chr1_3:16246045-16246064 | None:intergenic | 35.0% | |
| GTGAATCAACTTATCCTTAG+AGG | - | chr1_3:16246048-16246067 | None:intergenic | 35.0% | |
| GCAGTTAGGGGTAATAATAA+TGG | - | chr1_3:16246081-16246100 | None:intergenic | 35.0% | |
| CCTCTCTTAGAGATATCATA+TGG | - | chr1_3:16246281-16246300 | None:intergenic | 35.0% | |
| ! | CCATATGATATCTCTAAGAG+AGG | + | chr1_3:16246278-16246297 | Msa0106670:intron | 35.0% |
| CAAGATCATTCCTTGAAAGA+AGG | - | chr1_3:16246356-16246375 | None:intergenic | 35.0% | |
| GATCTTGATCTCTTCTAAGT+TGG | + | chr1_3:16246369-16246388 | Msa0106670:intron | 35.0% | |
| AGTCATTAGTTCCTAACTGT+GGG | - | chr1_3:16246410-16246429 | None:intergenic | 35.0% | |
| AAGTCATTAGTTCCTAACTG+TGG | - | chr1_3:16246411-16246430 | None:intergenic | 35.0% | |
| ACAGTTAGGAACTAATGACT+TGG | + | chr1_3:16246410-16246429 | Msa0106670:intron | 35.0% | |
| ACTTCATCTCTTTCAGTTTG+TGG | - | chr1_3:16246519-16246538 | None:intergenic | 35.0% | |
| TGCTCTAATAATCCTATGGA+AGG | + | chr1_3:16246654-16246673 | Msa0106670:intron | 35.0% | |
| ! | TTTTATGGTTGAGATTAGGG+AGG | + | chr1_3:16246683-16246702 | Msa0106670:intron | 35.0% |
| TATTGTGATTCGTGTGAATC+AGG | + | chr1_3:16246856-16246875 | Msa0106670:intron | 35.0% | |
| ! | AACAAAGTAGTAGCTGACTT+TGG | + | chr1_3:16246905-16246924 | Msa0106670:CDS | 35.0% |
| AACTTACTCTGCACTCAAAA+GGG | - | chr1_3:16246963-16246982 | None:intergenic | 35.0% | |
| AAACTTACTCTGCACTCAAA+AGG | - | chr1_3:16246964-16246983 | None:intergenic | 35.0% | |
| TTTCTCACACATCTAATGTG+CGG | + | chr1_3:16247292-16247311 | Msa0106670:intron | 35.0% | |
| ! | GTTTCACATACATGGTTTGT+TGG | + | chr1_3:16247382-16247401 | Msa0106670:intron | 35.0% |
| TGGAAATTCTGCTTTCATTG+TGG | + | chr1_3:16247402-16247421 | Msa0106670:intron | 35.0% | |
| TCGAACACCTTTAATGTGTT+GGG | + | chr1_3:16247475-16247494 | Msa0106670:intron | 35.0% | |
| TTTCACACCCAACACATTAA+AGG | - | chr1_3:16247485-16247504 | None:intergenic | 35.0% | |
| TTAATGTGTTGGGTGTGAAA+TGG | + | chr1_3:16247485-16247504 | Msa0106670:intron | 35.0% | |
| TAATGTGTTGGGTGTGAAAT+GGG | + | chr1_3:16247486-16247505 | Msa0106670:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_3:16247593-16247612 | None:intergenic | 35.0% | |
| ! | GGTATTTGATTTAGGAAGGA+GGG | - | chr1_3:16247650-16247669 | None:intergenic | 35.0% |
| ! | TGGTATTTGATTTAGGAAGG+AGG | - | chr1_3:16247651-16247670 | None:intergenic | 35.0% |
| !!! | AGCGTCTGATTATTTTAGAG+AGG | - | chr1_3:16247963-16247982 | None:intergenic | 35.0% |
| GAAAATGCTGAGGATGTAAT+AGG | + | chr1_3:16248242-16248261 | Msa0106670:intron | 35.0% | |
| ! | GGTCTTATCTCTCCTATTAA+AGG | + | chr1_3:16248263-16248282 | Msa0106670:intron | 35.0% |
| ACACAACAAGCAAATTACTG+AGG | - | chr1_3:16248325-16248344 | None:intergenic | 35.0% | |
| TTAGCGATATCAATCACATG+TGG | + | chr1_3:16248360-16248379 | Msa0106670:intron | 35.0% | |
| GCACATACGTTATATCAAGT+TGG | + | chr1_3:16248728-16248747 | Msa0106670:intron | 35.0% | |
| ATAAACTGTAACGTGTACGT+AGG | - | chr1_3:16249048-16249067 | None:intergenic | 35.0% | |
| CATTAGCGCAATAAGAAAAG+TGG | + | chr1_3:16249320-16249339 | Msa0106670:intron | 35.0% | |
| AATAAGAAAAGTGGTCAGAC+TGG | + | chr1_3:16249329-16249348 | Msa0106670:intron | 35.0% | |
| AGCGTTTAGACAGTTTAGAT+GGG | - | chr1_3:16249364-16249383 | None:intergenic | 35.0% | |
| ! | AAGAGCATACATATAGGCAA+GGG | - | chr1_3:16249462-16249481 | None:intergenic | 35.0% |
| ! | AAAGAGCATACATATAGGCA+AGG | - | chr1_3:16249463-16249482 | None:intergenic | 35.0% |
| ! | GGTATTTGATTTAGGAAGGA+GGG | - | chr1_3:16247650-16247669 | None:intergenic | 35.0% |
| ! | TGGTATTTGATTTAGGAAGG+AGG | - | chr1_3:16247651-16247670 | None:intergenic | 35.0% |
| !! | GATGCTATTTCAAGAGATTC+TGG | - | chr1_3:16249784-16249803 | None:intergenic | 35.0% |
| AATAGCATCTCTTAATGCTG+AGG | + | chr1_3:16249795-16249814 | Msa0106670:CDS | 35.0% | |
| CTAATATCATGGACTTGAGA+TGG | + | chr1_3:16250119-16250138 | Msa0106670:CDS | 35.0% | |
| TGATTGTATAACACACACCT+AGG | + | chr1_3:16250448-16250467 | Msa0106670:intron | 35.0% | |
| ! | AAGCTACATAGATTTAGGGT+AGG | - | chr1_3:16251697-16251716 | None:intergenic | 35.0% |
| ATGGTATTGTCACATATGTG+GGG | - | chr1_3:16251739-16251758 | None:intergenic | 35.0% | |
| CATGGTATTGTCACATATGT+GGG | - | chr1_3:16251740-16251759 | None:intergenic | 35.0% | |
| CACATATGTGACAATACCAT+GGG | + | chr1_3:16251739-16251758 | Msa0106670:intron | 35.0% | |
| ! | TCTAGCATTGAAATCCCTTA+AGG | - | chr1_3:16251802-16251821 | None:intergenic | 35.0% |
| ! | TAGATATTGCTGTTGATCTC+TGG | + | chr1_3:16252150-16252169 | Msa0106670:CDS | 35.0% |
| TAGTGTAGACAGAATTTGTG+TGG | + | chr1_3:16252209-16252228 | Msa0106670:exon | 35.0% | |
| ! | TCATGAGCACTTGTTAGATT+TGG | + | chr1_3:16252282-16252301 | Msa0106670:three_prime_UTR | 35.0% |
| ! | CATGAGCACTTGTTAGATTT+GGG | + | chr1_3:16252283-16252302 | Msa0106670:three_prime_UTR | 35.0% |
| TGAACTGTGAATCTCCTTAA+AGG | + | chr1_3:16252438-16252457 | Msa0106670:three_prime_UTR | 35.0% | |
| AGCACTAAAAGTAGTGACAG+TGG | + | chr1_3:16245006-16245025 | Msa0106670:five_prime_UTR | 40.0% | |
| ACTAAAAGTAGTGACAGTGG+CGG | + | chr1_3:16245009-16245028 | Msa0106670:five_prime_UTR | 40.0% | |
| AAAGAGTTAGAAGGTCACCT+TGG | + | chr1_3:16245100-16245119 | Msa0106670:CDS | 40.0% | |
| CAATCTTTGGTTGAGGGAAT+TGG | - | chr1_3:16245135-16245154 | None:intergenic | 40.0% | |
| CAAGCTCAATCTTTGGTTGA+GGG | - | chr1_3:16245141-16245160 | None:intergenic | 40.0% | |
| TCAAGCTCAATCTTTGGTTG+AGG | - | chr1_3:16245142-16245161 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGATGAGAT+AGG | + | chr1_3:16245389-16245408 | Msa0106670:intron | 40.0% | |
| AGATAGTCAGAACACTATGG+TGG | + | chr1_3:16245489-16245508 | Msa0106670:intron | 40.0% | |
| TAACTAACACAATCGGGAGT+TGG | + | chr1_3:16245700-16245719 | Msa0106670:intron | 40.0% | |
| TTCAAATCAGGGTGCAGTTA+GGG | - | chr1_3:16246094-16246113 | None:intergenic | 40.0% | |
| TTTCAAATCAGGGTGCAGTT+AGG | - | chr1_3:16246095-16246114 | None:intergenic | 40.0% | |
| CTCAAACTGTCCTTCTTTCA+AGG | + | chr1_3:16246343-16246362 | Msa0106670:intron | 40.0% | |
| TAGCATTAGTTCCCACAGTT+AGG | + | chr1_3:16246396-16246415 | Msa0106670:intron | 40.0% | |
| ACTTACTAGGACCACTAACT+AGG | + | chr1_3:16246545-16246564 | Msa0106670:intron | 40.0% | |
| TATTGCGTGTTCCTAGTTAG+TGG | - | chr1_3:16246559-16246578 | None:intergenic | 40.0% | |
| GTAGTCAGTGGAGAAATTCT+AGG | + | chr1_3:16246587-16246606 | Msa0106670:intron | 40.0% | |
| ATAAACAGTCCAAACCAGAG+AGG | - | chr1_3:16246626-16246645 | None:intergenic | 40.0% | |
| TGAGATTAGGGAGGAAGATA+AGG | + | chr1_3:16246692-16246711 | Msa0106670:intron | 40.0% | |
| TTCATGACAGCTTCTGCATA+CGG | - | chr1_3:16247327-16247346 | None:intergenic | 40.0% | |
| !! | CAACACATTAAAGGTGTTCG+AGG | - | chr1_3:16247476-16247495 | None:intergenic | 40.0% |
| CTCGAACACCTTTAATGTGT+TGG | + | chr1_3:16247474-16247493 | Msa0106670:intron | 40.0% | |
| !! | AAAACCGGCTTGTAAAGTGA+GGG | - | chr1_3:16247578-16247597 | None:intergenic | 40.0% |
| !! | CTTTACAAGCCGGTTTTGTA+AGG | + | chr1_3:16247581-16247600 | Msa0106670:intron | 40.0% |
| ! | ACTCATGATTTTCTAGGCCA+AGG | + | chr1_3:16247847-16247866 | Msa0106670:intron | 40.0% |
| ! | CTCATGATTTTCTAGGCCAA+GGG | + | chr1_3:16247848-16247867 | Msa0106670:intron | 40.0% |
| ! | GTGAGGTTAAAGTGATTTGG+TGG | + | chr1_3:16248168-16248187 | Msa0106670:intron | 40.0% |
| ! | CTCAGCATTTTCGCAAACAA+TGG | - | chr1_3:16248234-16248253 | None:intergenic | 40.0% |
| CATTGTTTGCGAAAATGCTG+AGG | + | chr1_3:16248232-16248251 | Msa0106670:intron | 40.0% | |
| ATGTGGATCACTGATGTTCA+GGG | + | chr1_3:16248377-16248396 | Msa0106670:intron | 40.0% | |
| !!! | CCTTGTTTTGTTTGCCTCAA+CGG | - | chr1_3:16248415-16248434 | None:intergenic | 40.0% |
| AACGTGTACGTAGGAACAAA+TGG | - | chr1_3:16249039-16249058 | None:intergenic | 40.0% | |
| ! | AAGTTGTGCATTGACATGTG+TGG | - | chr1_3:16249075-16249094 | None:intergenic | 40.0% |
| CAGCGTTTAGACAGTTTAGA+TGG | - | chr1_3:16249365-16249384 | None:intergenic | 40.0% | |
| CATCTAAACTGTCTAAACGC+TGG | + | chr1_3:16249363-16249382 | Msa0106670:intron | 40.0% | |
| TTAAACTGCGATATGAACGG+AGG | + | chr1_3:16249404-16249423 | Msa0106670:intron | 40.0% | |
| TAAACTGCGATATGAACGGA+GGG | + | chr1_3:16249405-16249424 | Msa0106670:intron | 40.0% | |
| ! | GGGAGTATAGTATACTAGCA+TGG | + | chr1_3:16249425-16249444 | Msa0106670:intron | 40.0% |
| !! | CCTTACAAGTCGGTTTTGTA+CGG | + | chr1_3:16249539-16249558 | Msa0106670:intron | 40.0% |
| TCTTAATGCTGAGGAACTTG+AGG | + | chr1_3:16249804-16249823 | Msa0106670:CDS | 40.0% | |
| TCTTAGGTTTCTCGATAACC+AGG | + | chr1_3:16249863-16249882 | Msa0106670:intron | 40.0% | |
| TCGATAACCAGGTTTCTTGT+TGG | + | chr1_3:16249874-16249893 | Msa0106670:intron | 40.0% | |
| ATAACCAGGTTTCTTGTTGG+AGG | + | chr1_3:16249877-16249896 | Msa0106670:intron | 40.0% | |
| ! | TTTTCCTCCAACAAGAAACC+TGG | - | chr1_3:16249884-16249903 | None:intergenic | 40.0% |
| TATTCAACCTAAACTGCAGC+TGG | + | chr1_3:16250078-16250097 | Msa0106670:intron | 40.0% | |
| ACATCCTTAAGAGCAAAGCA+AGG | - | chr1_3:16250638-16250657 | None:intergenic | 40.0% | |
| TGGCTTCTAATTATGTGTCC+AGG | + | chr1_3:16250676-16250695 | Msa0106670:intron | 40.0% | |
| TATACTCTCAAGTAGGATCC+TGG | - | chr1_3:16250697-16250716 | None:intergenic | 40.0% | |
| TGTATTGTATGAAGGAGGTC+CGG | + | chr1_3:16250777-16250796 | Msa0106670:intron | 40.0% | |
| AGCAGAGATCATACATATCC+CGG | - | chr1_3:16250799-16250818 | None:intergenic | 40.0% | |
| ! | TGAATCCTCCATTTGGAACT+CGG | + | chr1_3:16251020-16251039 | Msa0106670:CDS | 40.0% |
| ! | TTTTTCCGAGTTCCAAATGG+AGG | - | chr1_3:16251028-16251047 | None:intergenic | 40.0% |
| ! | TCCATTTGGAACTCGGAAAA+AGG | + | chr1_3:16251027-16251046 | Msa0106670:CDS | 40.0% |
| ! | CCATTTGGAACTCGGAAAAA+GGG | + | chr1_3:16251028-16251047 | Msa0106670:CDS | 40.0% |
| !! | GTAAGCAATAGCATTGATGC+TGG | + | chr1_3:16251085-16251104 | Msa0106670:intron | 40.0% |
| CCATGGTATTGTCACATATG+TGG | - | chr1_3:16251741-16251760 | None:intergenic | 40.0% | |
| CCACATATGTGACAATACCA+TGG | + | chr1_3:16251738-16251757 | Msa0106670:intron | 40.0% | |
| !! | AAGTGCTGAAGTTATCTGTG+AGG | + | chr1_3:16251821-16251840 | Msa0106670:CDS | 40.0% |
| CTTACTACTACACAGAACAC+TGG | - | chr1_3:16252017-16252036 | None:intergenic | 40.0% | |
| GTTCTGTGTAGTAGTAAGCA+TGG | + | chr1_3:16252019-16252038 | Msa0106670:intron | 40.0% | |
| TAGTAAGCATGGTGCAATTG+TGG | + | chr1_3:16252030-16252049 | Msa0106670:intron | 40.0% | |
| ! | TTTGTATGGTTTGGCAGCTT+CGG | + | chr1_3:16252084-16252103 | Msa0106670:intron | 40.0% |
| GAGCTTGAACAATACCCAAC+TGG | + | chr1_3:16245154-16245173 | Msa0106670:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1_3:16245567-16245586 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1_3:16245568-16245587 | None:intergenic | 45.0% |
| TCAAATCAGGGTGCAGTTAG+GGG | - | chr1_3:16246093-16246112 | None:intergenic | 45.0% | |
| GATGCGCGTATGCAAATTGA+AGG | - | chr1_3:16246126-16246145 | None:intergenic | 45.0% | |
| GATTAGGGAGGAAGATAAGG+TGG | + | chr1_3:16246695-16246714 | Msa0106670:intron | 45.0% | |
| AACACATGCTTGCACACCAT+TGG | - | chr1_3:16246744-16246763 | None:intergenic | 45.0% | |
| ! | GTAGTAGCTGACTTTGGATG+TGG | + | chr1_3:16246911-16246930 | Msa0106670:CDS | 45.0% |
| GGATGTGGTTGTGGTACTTT+AGG | + | chr1_3:16246926-16246945 | Msa0106670:CDS | 45.0% | |
| ACAGCTTCTGCATACGGATT+TGG | - | chr1_3:16247321-16247340 | None:intergenic | 45.0% | |
| GTAACCCAAATGCTGCAGTT+AGG | - | chr1_3:16247442-16247461 | None:intergenic | 45.0% | |
| ATTTAGTCCCACATTGCCGA+GGG | + | chr1_3:16247512-16247531 | Msa0106670:intron | 45.0% | |
| !! | CAAAACCGGCTTGTAAAGTG+AGG | - | chr1_3:16247579-16247598 | None:intergenic | 45.0% |
| GACTAGTGTTTGTCAACCCT+TGG | - | chr1_3:16247867-16247886 | None:intergenic | 45.0% | |
| CATGTGGATCACTGATGTTC+AGG | + | chr1_3:16248376-16248395 | Msa0106670:intron | 45.0% | |
| ! | GATGTTCAGGGCTTGATTTG+TGG | + | chr1_3:16248389-16248408 | Msa0106670:intron | 45.0% |
| CCGTTGAGGCAAACAAAACA+AGG | + | chr1_3:16248412-16248431 | Msa0106670:intron | 45.0% | |
| TCTGCTCTCACCTTACAAGT+CGG | + | chr1_3:16249529-16249548 | Msa0106670:intron | 45.0% | |
| !! | CCGTACAAAACCGACTTGTA+AGG | - | chr1_3:16249542-16249561 | None:intergenic | 45.0% |
| ATCATGGACTTGAGATGGAG+AGG | + | chr1_3:16250124-16250143 | Msa0106670:CDS | 45.0% | |
| CTTAAGAGCAAAGCAAGGAG+AGG | - | chr1_3:16250633-16250652 | None:intergenic | 45.0% | |
| CTCTCCTTGCTTTGCTCTTA+AGG | + | chr1_3:16250631-16250650 | Msa0106670:intron | 45.0% | |
| GTATTGTATGAAGGAGGTCC+GGG | + | chr1_3:16250778-16250797 | Msa0106670:intron | 45.0% | |
| ATCATCTTGGTACTTTCGCC+AGG | + | chr1_3:16250974-16250993 | Msa0106670:intron | 45.0% | |
| ACTGTATCAACAACTGGACC+TGG | - | chr1_3:16250995-16251014 | None:intergenic | 45.0% | |
| ! | CCCTTTTTCCGAGTTCCAAA+TGG | - | chr1_3:16251031-16251050 | None:intergenic | 45.0% |
| AGCCACGATGCACATGTATA+AGG | + | chr1_3:16251348-16251367 | Msa0106670:intron | 45.0% | |
| GCCACGATGCACATGTATAA+GGG | + | chr1_3:16251349-16251368 | Msa0106670:intron | 45.0% | |
| ATGTGAAACGTGCAGCCTTA+AGG | + | chr1_3:16251784-16251803 | Msa0106670:CDS | 45.0% | |
| TGTGAAACGTGCAGCCTTAA+GGG | + | chr1_3:16251785-16251804 | Msa0106670:CDS | 45.0% | |
| !! | CTATAATATTATATAAAAAT+TGG | + | chr1_3:16248633-16248652 | Msa0106670:intron | 5.0% |
| !!! | ATCATTTTATATAATATAAT+AGG | - | chr1_3:16248824-16248843 | None:intergenic | 5.0% |
| !!! | ATATTATAATTTATTTTTTC+AGG | + | chr1_3:16249191-16249210 | Msa0106670:intron | 5.0% |
| !!! | TATTATAATTTATTTTTTCA+GGG | + | chr1_3:16249192-16249211 | Msa0106670:intron | 5.0% |
| !! | TAAATAAATAAATTAAGTTT+AGG | + | chr1_3:16251424-16251443 | Msa0106670:intron | 5.0% |
| TGACAGTGGCGGTGAAAGTT+TGG | + | chr1_3:16245020-16245039 | Msa0106670:five_prime_UTR | 50.0% | |
| GGAATTGGTCGAGAGAACCA+AGG | - | chr1_3:16245120-16245139 | None:intergenic | 50.0% | |
| AAGCGATGTGAGGTCCAGTT+GGG | - | chr1_3:16245171-16245190 | None:intergenic | 50.0% | |
| AGCATACGAGAAGCGATGTG+AGG | - | chr1_3:16245181-16245200 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1_3:16245563-16245582 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1_3:16245569-16245588 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1_3:16245566-16245585 | Msa0106670:intron | 50.0% | |
| AACTCTGCTCCTCTCTGGTT+TGG | + | chr1_3:16246614-16246633 | Msa0106670:intron | 50.0% | |
| GGGAGGAAGATAAGGTGGTT+AGG | + | chr1_3:16246700-16246719 | Msa0106670:intron | 50.0% | |
| ! | GCTGACTTTGGATGTGGTTG+TGG | + | chr1_3:16246917-16246936 | Msa0106670:CDS | 50.0% |
| ACCCAAATGCTGCAGTTAGG+CGG | - | chr1_3:16247439-16247458 | None:intergenic | 50.0% | |
| GGTGTTCGAGGCTGCAATAA+AGG | - | chr1_3:16247464-16247483 | None:intergenic | 50.0% | |
| TGTGTTGGGTGTGAAATGGG+TGG | + | chr1_3:16247489-16247508 | Msa0106670:intron | 50.0% | |
| GATTTAGTCCCACATTGCCG+AGG | + | chr1_3:16247511-16247530 | Msa0106670:intron | 50.0% | |
| ACTACACAGGCCATATCCCT+CGG | - | chr1_3:16247531-16247550 | None:intergenic | 50.0% | |
| GGGACTCTAAGTAACCGTCT+CGG | - | chr1_3:16247630-16247649 | None:intergenic | 50.0% | |
| ACCTAAACTGCAGCTGGACA+TGG | + | chr1_3:16250084-16250103 | Msa0106670:intron | 50.0% | |
| TCCATGTCCAGCTGCAGTTT+AGG | - | chr1_3:16250088-16250107 | None:intergenic | 50.0% | |
| TGGAACTCGGAAAAAGGGTG+CGG | + | chr1_3:16251033-16251052 | Msa0106670:CDS | 50.0% | |
| ! | TCGGAAAAAGGGTGCGGATT+TGG | + | chr1_3:16251039-16251058 | Msa0106670:CDS | 50.0% |
| GCCCTTATACATGTGCATCG+TGG | - | chr1_3:16251353-16251372 | None:intergenic | 50.0% | |
| ! | GATCTCTGGCGTTTTGTACC+TGG | + | chr1_3:16252164-16252183 | Msa0106670:CDS | 50.0% |
| ! | CCTCTGCTTTGATGACTTCC+AGG | - | chr1_3:16252185-16252204 | None:intergenic | 50.0% |
| CCTGGAAGTCATCAAAGCAG+AGG | + | chr1_3:16252182-16252201 | Msa0106670:CDS | 50.0% | |
| GAAGCGATGTGAGGTCCAGT+TGG | - | chr1_3:16245172-16245191 | None:intergenic | 55.0% | |
| ! | CGGGTGTTGCGTTGAATGTG+TGG | + | chr1_3:16245370-16245389 | Msa0106670:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_3:16245555-16245574 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_3:16245554-16245573 | Msa0106670:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1_3:16245555-16245574 | Msa0106670:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1_3:16245561-16245580 | Msa0106670:intron | 55.0% | |
| AGTGTGCGGTGCCTTCTCAA+TGG | - | chr1_3:16245675-16245694 | None:intergenic | 55.0% | |
| GTGCTAACTCTGCTCCTCTC+TGG | + | chr1_3:16246609-16246628 | Msa0106670:intron | 55.0% | |
| ATGCTGCAGTTAGGCGGCTA+GGG | - | chr1_3:16247433-16247452 | None:intergenic | 55.0% | |
| AATGCTGCAGTTAGGCGGCT+AGG | - | chr1_3:16247434-16247453 | None:intergenic | 55.0% | |
| AGCCGCCTAACTGCAGCATT+TGG | + | chr1_3:16247434-16247453 | Msa0106670:intron | 55.0% | |
| GCCGCCTAACTGCAGCATTT+GGG | + | chr1_3:16247435-16247454 | Msa0106670:intron | 55.0% | |
| TCCCACATTGCCGAGGGATA+TGG | + | chr1_3:16247518-16247537 | Msa0106670:intron | 55.0% | |
| GCCATATCCCTCGGCAATGT+GGG | - | chr1_3:16247522-16247541 | None:intergenic | 55.0% | |
| CGGCTTGTAAAGTGAGGGCA+GGG | - | chr1_3:16247573-16247592 | None:intergenic | 55.0% | |
| CCTGCCCTCACTTTACAAGC+CGG | + | chr1_3:16247571-16247590 | Msa0106670:intron | 55.0% | |
| !! | GGCTTGATTTGTGGCCGTTG+AGG | + | chr1_3:16248398-16248417 | Msa0106670:intron | 55.0% |
| TGCTGCAGTTAGGCGGCTAG+GGG | - | chr1_3:16247432-16247451 | None:intergenic | 60.0% | |
| GGCCATATCCCTCGGCAATG+TGG | - | chr1_3:16247523-16247542 | None:intergenic | 60.0% | |
| ! | CCGGCTTGTAAAGTGAGGGC+AGG | - | chr1_3:16247574-16247593 | None:intergenic | 60.0% |
| TGCAGTTAGGCGGCTAGGGG+AGG | - | chr1_3:16247429-16247448 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 16245000 | 16252520 | 16245000 | ID=Msa0106670;Name=Msa0106670 |
| chr1_3 | mRNA | 16245000 | 16252520 | 16245000 | ID=Msa0106670-mRNA-1;Parent=Msa0106670;Name=Msa0106670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=91|1|1|1|1|1|8|309|213 |
| chr1_3 | exon | 16245000 | 16245207 | 16245000 | ID=Msa0106670-mRNA-1:exon:6141;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16246878 | 16246975 | 16246878 | ID=Msa0106670-mRNA-1:exon:6142;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16249756 | 16249825 | 16249756 | ID=Msa0106670-mRNA-1:exon:6143;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16250097 | 16250145 | 16250097 | ID=Msa0106670-mRNA-1:exon:6144;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16250996 | 16251084 | 16250996 | ID=Msa0106670-mRNA-1:exon:6145;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16251179 | 16251226 | 16251179 | ID=Msa0106670-mRNA-1:exon:6146;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16251783 | 16251842 | 16251783 | ID=Msa0106670-mRNA-1:exon:6147;Parent=Msa0106670-mRNA-1 |
| chr1_3 | exon | 16252101 | 16252520 | 16252101 | ID=Msa0106670-mRNA-1:exon:6148;Parent=Msa0106670-mRNA-1 |
| chr1_3 | five_prime_UTR | 16245000 | 16245090 | 16245000 | ID=Msa0106670-mRNA-1:five_prime_utr;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16245091 | 16245207 | 16245091 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16246878 | 16246975 | 16246878 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16249756 | 16249825 | 16249756 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16250097 | 16250145 | 16250097 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16250996 | 16251084 | 16250996 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16251179 | 16251226 | 16251179 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16251783 | 16251842 | 16251783 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | CDS | 16252101 | 16252211 | 16252101 | ID=Msa0106670-mRNA-1:cds;Parent=Msa0106670-mRNA-1 |
| chr1_3 | three_prime_UTR | 16252212 | 16252520 | 16252212 | ID=Msa0106670-mRNA-1:three_prime_utr;Parent=Msa0106670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
