AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0959850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959850 MtrunA17_Chr6g0478031 91.083 157 3 1 1 146 1 157 6.22e-98 278
Msa0959850 MtrunA17_Chr2g0303931 70.629 143 31 1 1 132 6 148 8.43e-62 187
Msa0959850 MtrunA17_Chr4g0065951 41.606 137 69 1 16 141 21 157 1.34e-28 103
Msa0959850 MtrunA17_Chr1g0199041 40.909 154 65 5 2 143 6 145 2.07e-23 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959850 AT5G46530.1 67.114 149 38 1 1 138 6 154 1.35e-67 202
Msa0959850 AT1G29520.1 71.812 149 31 1 1 138 6 154 6.64e-64 192
Msa0959850 AT5G18970.1 40.909 154 80 1 2 144 7 160 1.45e-32 113
Msa0959850 AT1G04560.1 41.667 156 66 4 2 145 7 149 5.15e-27 100

Find 29 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCCCATTGGGAAGAAAA+TGG 0.238328 6_3:-77541789 None:intergenic
TGCATGTATGTCATTGTTCT+AGG 0.248721 6_3:+77541515 Msa0959850:CDS
CTCTACATAGTTGCAATTCA+TGG 0.272940 6_3:+77542748 Msa0959850:CDS
GGTGCTGCATCGACAATTTC+AGG 0.318250 6_3:+77541860 Msa0959850:CDS
TGCTGCTTCAATTGCTACCT+TGG 0.341425 6_3:+77541925 Msa0959850:CDS
CCAATGGGAAATGCTTCAAC+TGG 0.374176 6_3:+77541800 Msa0959850:CDS
CTTCAATTGCTACCTTGGCT+TGG 0.378873 6_3:+77541930 Msa0959850:CDS
GACTCTTACACTGCTTGCCA+TGG 0.388463 6_3:+77541952 Msa0959850:CDS
GTTACGATTTCTTTGTTAGC+TGG 0.398205 6_3:+77541830 Msa0959850:CDS
TCTTTGTTAGCTGGAGTAGT+TGG 0.415192 6_3:+77541839 Msa0959850:CDS
TTGTTCTAGGCATTGGTGCA+TGG 0.424644 6_3:+77541528 Msa0959850:CDS
CAGTTGAAGCATTTCCCATT+GGG 0.433142 6_3:-77541799 None:intergenic
TGAGCTGGAAGATTTAATTC+CGG 0.439380 6_3:-77541758 None:intergenic
TGTTCTAGGCATTGGTGCAT+GGG 0.449144 6_3:+77541529 Msa0959850:CDS
ACTCTTACACTGCTTGCCAT+GGG 0.453490 6_3:+77541953 Msa0959850:CDS
ACAAAATACATAGTTCGGTT+AGG 0.457892 6_3:+77541448 None:intergenic
TTTCCCATTGGGAAGAAAAT+GGG 0.461124 6_3:-77541788 None:intergenic
GAGTCAAACATATCTGTTCA+TGG 0.465531 6_3:+77541882 Msa0959850:CDS
TCAAATTAGAAATGCACGTC+TGG 0.465623 6_3:+77542596 Msa0959850:intron
CCAGTTGAAGCATTTCCCAT+TGG 0.492597 6_3:-77541800 None:intergenic
GATAATTATGAAAGCCTCCA+TGG 0.495765 6_3:-77542707 None:intergenic
TATGTCATTGTTCTAGGCAT+TGG 0.506725 6_3:+77541521 Msa0959850:CDS
GTCCATAGCAACACTTCTCT+TGG 0.510981 6_3:+77541481 Msa0959850:CDS
CACCAAGAGAAGTGTTGCTA+TGG 0.525202 6_3:-77541483 None:intergenic
ATGAATAGAGCAATAGATCA+TGG 0.550315 6_3:+77541554 Msa0959850:CDS
AGAGAAGCTGTGTAACTGAA+AGG 0.596446 6_3:-77542729 None:intergenic
CTCTTACACTGCTTGCCATG+GGG 0.615745 6_3:+77541954 Msa0959850:CDS
GTAGCAATTGAAGCAGCAGA+TGG 0.618253 6_3:-77541920 None:intergenic
CAGTGTAAGAGTCCAAGCCA+AGG 0.634224 6_3:-77541942 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATAATATATATATTTGA+CGG + chr6_3:77542779-77542798 Msa0959850:CDS 10.0%
!! AAATTAAATGAGCATATTAA+AGG + chr6_3:77542274-77542293 Msa0959850:intron 15.0%
!! AATTAAATGAGCATATTAAA+GGG + chr6_3:77542275-77542294 Msa0959850:intron 15.0%
!!! GTTTTAATTGAAAACAAATT+TGG - chr6_3:77542494-77542513 None:intergenic 15.0%
!!! GAATCATTTAATAATTTTCT+TGG + chr6_3:77542632-77542651 Msa0959850:intron 15.0%
!! AAATTAAATGAGCATATTAA+AGG + chr6_3:77542274-77542293 Msa0959850:intron 15.0%
!! AATTAAATGAGCATATTAAA+GGG + chr6_3:77542275-77542294 Msa0959850:intron 15.0%
!!! GTTTTAATTGAAAACAAATT+TGG - chr6_3:77542494-77542513 None:intergenic 15.0%
!!! GAATCATTTAATAATTTTCT+TGG + chr6_3:77542632-77542651 Msa0959850:intron 15.0%
!!! TTCTGACATTCTAAAATATT+TGG - chr6_3:77541622-77541641 None:intergenic 20.0%
!!! ATTTTGTTATGAAATTATGC+AGG + chr6_3:77541734-77541753 Msa0959850:intron 20.0%
!!! CATTTTTTACTATTATTTGG+AGG - chr6_3:77542020-77542039 None:intergenic 20.0%
!! CTCCAAATAATAGTAAAAAA+TGG + chr6_3:77542018-77542037 Msa0959850:intron 20.0%
!!! TGCCATTTTTTACTATTATT+TGG - chr6_3:77542023-77542042 None:intergenic 20.0%
!!! TTCTGACATTCTAAAATATT+TGG - chr6_3:77541622-77541641 None:intergenic 20.0%
!!! ATTTTGTTATGAAATTATGC+AGG + chr6_3:77541734-77541753 Msa0959850:intron 20.0%
!!! CATTTTTTACTATTATTTGG+AGG - chr6_3:77542020-77542039 None:intergenic 20.0%
!! CTCCAAATAATAGTAAAAAA+TGG + chr6_3:77542018-77542037 Msa0959850:intron 20.0%
!!! TGCCATTTTTTACTATTATT+TGG - chr6_3:77542023-77542042 None:intergenic 20.0%
!!! ATAGATCATGGTTTTATCAT+AGG + chr6_3:77541566-77541585 Msa0959850:CDS 25.0%
! TTAGAATGTCAGAAAAACAA+TGG + chr6_3:77541628-77541647 Msa0959850:intron 25.0%
! TTTACTATTATTTGGAGGTA+TGG - chr6_3:77542015-77542034 None:intergenic 25.0%
! TATTACTTGTGTAGAAAACA+TGG - chr6_3:77542124-77542143 None:intergenic 25.0%
! CTATCAATCATCTATAAGAA+TGG - chr6_3:77542205-77542224 None:intergenic 25.0%
!! TATCTTACCTAGTTTAAGTT+TGG + chr6_3:77542379-77542398 Msa0959850:intron 25.0%
!! TGTAACTTTTGTCAAAATCT+CGG + chr6_3:77542460-77542479 Msa0959850:intron 25.0%
!!! ATAGATCATGGTTTTATCAT+AGG + chr6_3:77541566-77541585 Msa0959850:CDS 25.0%
! TTAGAATGTCAGAAAAACAA+TGG + chr6_3:77541628-77541647 Msa0959850:intron 25.0%
! TTTACTATTATTTGGAGGTA+TGG - chr6_3:77542015-77542034 None:intergenic 25.0%
! TATTACTTGTGTAGAAAACA+TGG - chr6_3:77542124-77542143 None:intergenic 25.0%
! CTATCAATCATCTATAAGAA+TGG - chr6_3:77542205-77542224 None:intergenic 25.0%
!! TATCTTACCTAGTTTAAGTT+TGG + chr6_3:77542379-77542398 Msa0959850:intron 25.0%
!! TGTAACTTTTGTCAAAATCT+CGG + chr6_3:77542460-77542479 Msa0959850:intron 25.0%
ATGAATAGAGCAATAGATCA+TGG + chr6_3:77541554-77541573 Msa0959850:CDS 30.0%
ATTTGGCAAATGTGAAAGAT+AGG - chr6_3:77541605-77541624 None:intergenic 30.0%
!!! GTATGCTGAAGTTTTAATTC+CGG - chr6_3:77541712-77541731 None:intergenic 30.0%
AATAGTAAAAAATGGCAACC+CGG + chr6_3:77542026-77542045 Msa0959850:intron 30.0%
! TACCTAGTTTAAGTTTGGAT+TGG + chr6_3:77542384-77542403 Msa0959850:intron 30.0%
ATGAATAGAGCAATAGATCA+TGG + chr6_3:77541554-77541573 Msa0959850:CDS 30.0%
ATTTGGCAAATGTGAAAGAT+AGG - chr6_3:77541605-77541624 None:intergenic 30.0%
!!! GTATGCTGAAGTTTTAATTC+CGG - chr6_3:77541712-77541731 None:intergenic 30.0%
AATAGTAAAAAATGGCAACC+CGG + chr6_3:77542026-77542045 Msa0959850:intron 30.0%
! TACCTAGTTTAAGTTTGGAT+TGG + chr6_3:77542384-77542403 Msa0959850:intron 30.0%
TGCATGTATGTCATTGTTCT+AGG + chr6_3:77541515-77541534 Msa0959850:CDS 35.0%
! TATGTCATTGTTCTAGGCAT+TGG + chr6_3:77541521-77541540 Msa0959850:CDS 35.0%
GTTATGAAATTATGCAGGTC+CGG + chr6_3:77541739-77541758 Msa0959850:intron 35.0%
TGAGCTGGAAGATTTAATTC+CGG - chr6_3:77541761-77541780 None:intergenic 35.0%
AAAATGGGTGAAAAATGAGC+TGG - chr6_3:77541776-77541795 None:intergenic 35.0%
TTTCCCATTGGGAAGAAAAT+GGG - chr6_3:77541791-77541810 None:intergenic 35.0%
ATTTCCCATTGGGAAGAAAA+TGG - chr6_3:77541792-77541811 None:intergenic 35.0%
GTTACGATTTCTTTGTTAGC+TGG + chr6_3:77541830-77541849 Msa0959850:CDS 35.0%
GAGTCAAACATATCTGTTCA+TGG + chr6_3:77541882-77541901 Msa0959850:CDS 35.0%
AAAGAGAGAAATTTACCCCA+TGG - chr6_3:77541972-77541991 None:intergenic 35.0%
CGATGAATTTGGCAAAATCA+TGG + chr6_3:77542407-77542426 Msa0959850:intron 35.0%
ATTTGGCAAAATCATGGTAG+TGG + chr6_3:77542413-77542432 Msa0959850:intron 35.0%
TCAAATTAGAAATGCACGTC+TGG + chr6_3:77542596-77542615 Msa0959850:intron 35.0%
! TCTCTTTTTGCAGAAAACCA+TGG + chr6_3:77542690-77542709 Msa0959850:intron 35.0%
GATAATTATGAAAGCCTCCA+TGG - chr6_3:77542710-77542729 None:intergenic 35.0%
CTCTACATAGTTGCAATTCA+TGG + chr6_3:77542748-77542767 Msa0959850:CDS 35.0%
TGCATGTATGTCATTGTTCT+AGG + chr6_3:77541515-77541534 Msa0959850:CDS 35.0%
! TATGTCATTGTTCTAGGCAT+TGG + chr6_3:77541521-77541540 Msa0959850:CDS 35.0%
GTTATGAAATTATGCAGGTC+CGG + chr6_3:77541739-77541758 Msa0959850:intron 35.0%
TGAGCTGGAAGATTTAATTC+CGG - chr6_3:77541761-77541780 None:intergenic 35.0%
AAAATGGGTGAAAAATGAGC+TGG - chr6_3:77541776-77541795 None:intergenic 35.0%
TTTCCCATTGGGAAGAAAAT+GGG - chr6_3:77541791-77541810 None:intergenic 35.0%
ATTTCCCATTGGGAAGAAAA+TGG - chr6_3:77541792-77541811 None:intergenic 35.0%
GTTACGATTTCTTTGTTAGC+TGG + chr6_3:77541830-77541849 Msa0959850:CDS 35.0%
GAGTCAAACATATCTGTTCA+TGG + chr6_3:77541882-77541901 Msa0959850:CDS 35.0%
AAAGAGAGAAATTTACCCCA+TGG - chr6_3:77541972-77541991 None:intergenic 35.0%
CGATGAATTTGGCAAAATCA+TGG + chr6_3:77542407-77542426 Msa0959850:intron 35.0%
ATTTGGCAAAATCATGGTAG+TGG + chr6_3:77542413-77542432 Msa0959850:intron 35.0%
TCAAATTAGAAATGCACGTC+TGG + chr6_3:77542596-77542615 Msa0959850:intron 35.0%
! TCTCTTTTTGCAGAAAACCA+TGG + chr6_3:77542690-77542709 Msa0959850:intron 35.0%
GATAATTATGAAAGCCTCCA+TGG - chr6_3:77542710-77542729 None:intergenic 35.0%
CTCTACATAGTTGCAATTCA+TGG + chr6_3:77542748-77542767 Msa0959850:CDS 35.0%
AACGTGTGAGTTAGGTTTAC+CGG + chr6_3:77541685-77541704 Msa0959850:intron 40.0%
!!! CTGAAGTTTTAATTCCGGTC+CGG - chr6_3:77541707-77541726 None:intergenic 40.0%
! TTCACCCATTTTCTTCCCAA+TGG + chr6_3:77541784-77541803 Msa0959850:CDS 40.0%
! TCACCCATTTTCTTCCCAAT+GGG + chr6_3:77541785-77541804 Msa0959850:CDS 40.0%
! CAGTTGAAGCATTTCCCATT+GGG - chr6_3:77541802-77541821 None:intergenic 40.0%
TCTTTGTTAGCTGGAGTAGT+TGG + chr6_3:77541839-77541858 Msa0959850:CDS 40.0%
AAAATAATGAGACCCCTTCC+CGG - chr6_3:77542080-77542099 None:intergenic 40.0%
CGCCAATCCAAACTTAAACT+AGG - chr6_3:77542389-77542408 None:intergenic 40.0%
!! GTTTGGATTGGCGATGAATT+TGG + chr6_3:77542396-77542415 Msa0959850:intron 40.0%
! TTAACTTTTGCAGCTTTGCC+TGG + chr6_3:77542559-77542578 Msa0959850:intron 40.0%
TTGAAGCTCAATCTCTTTCC+AGG - chr6_3:77542580-77542599 None:intergenic 40.0%
! CTTTTTGCAGAAAACCATGG+AGG + chr6_3:77542693-77542712 Msa0959850:intron 40.0%
AGAGAAGCTGTGTAACTGAA+AGG - chr6_3:77542732-77542751 None:intergenic 40.0%
AACGTGTGAGTTAGGTTTAC+CGG + chr6_3:77541685-77541704 Msa0959850:intron 40.0%
!!! CTGAAGTTTTAATTCCGGTC+CGG - chr6_3:77541707-77541726 None:intergenic 40.0%
! TTCACCCATTTTCTTCCCAA+TGG + chr6_3:77541784-77541803 Msa0959850:CDS 40.0%
! TCACCCATTTTCTTCCCAAT+GGG + chr6_3:77541785-77541804 Msa0959850:CDS 40.0%
! CAGTTGAAGCATTTCCCATT+GGG - chr6_3:77541802-77541821 None:intergenic 40.0%
TCTTTGTTAGCTGGAGTAGT+TGG + chr6_3:77541839-77541858 Msa0959850:CDS 40.0%
AAAATAATGAGACCCCTTCC+CGG - chr6_3:77542080-77542099 None:intergenic 40.0%
CGCCAATCCAAACTTAAACT+AGG - chr6_3:77542389-77542408 None:intergenic 40.0%
!! GTTTGGATTGGCGATGAATT+TGG + chr6_3:77542396-77542415 Msa0959850:intron 40.0%
! TTAACTTTTGCAGCTTTGCC+TGG + chr6_3:77542559-77542578 Msa0959850:intron 40.0%
TTGAAGCTCAATCTCTTTCC+AGG - chr6_3:77542580-77542599 None:intergenic 40.0%
! CTTTTTGCAGAAAACCATGG+AGG + chr6_3:77542693-77542712 Msa0959850:intron 40.0%
AGAGAAGCTGTGTAACTGAA+AGG - chr6_3:77542732-77542751 None:intergenic 40.0%
GTCCATAGCAACACTTCTCT+TGG + chr6_3:77541481-77541500 Msa0959850:CDS 45.0%
!! CACCAAGAGAAGTGTTGCTA+TGG - chr6_3:77541486-77541505 None:intergenic 45.0%
!! TTGTTCTAGGCATTGGTGCA+TGG + chr6_3:77541528-77541547 Msa0959850:CDS 45.0%
!! TGTTCTAGGCATTGGTGCAT+GGG + chr6_3:77541529-77541548 Msa0959850:CDS 45.0%
TGCGTAGTAACGTGTGAGTT+AGG + chr6_3:77541677-77541696 Msa0959850:intron 45.0%
! CCAGTTGAAGCATTTCCCAT+TGG - chr6_3:77541803-77541822 None:intergenic 45.0%
CCAATGGGAAATGCTTCAAC+TGG + chr6_3:77541800-77541819 Msa0959850:CDS 45.0%
GTAGCAATTGAAGCAGCAGA+TGG - chr6_3:77541923-77541942 None:intergenic 45.0%
! TGCTGCTTCAATTGCTACCT+TGG + chr6_3:77541925-77541944 Msa0959850:CDS 45.0%
CTTCAATTGCTACCTTGGCT+TGG + chr6_3:77541930-77541949 Msa0959850:CDS 45.0%
ACTCTTACACTGCTTGCCAT+GGG + chr6_3:77541953-77541972 Msa0959850:CDS 45.0%
GTCCATAGCAACACTTCTCT+TGG + chr6_3:77541481-77541500 Msa0959850:CDS 45.0%
!! CACCAAGAGAAGTGTTGCTA+TGG - chr6_3:77541486-77541505 None:intergenic 45.0%
!! TTGTTCTAGGCATTGGTGCA+TGG + chr6_3:77541528-77541547 Msa0959850:CDS 45.0%
!! TGTTCTAGGCATTGGTGCAT+GGG + chr6_3:77541529-77541548 Msa0959850:CDS 45.0%
TGCGTAGTAACGTGTGAGTT+AGG + chr6_3:77541677-77541696 Msa0959850:intron 45.0%
! CCAGTTGAAGCATTTCCCAT+TGG - chr6_3:77541803-77541822 None:intergenic 45.0%
CCAATGGGAAATGCTTCAAC+TGG + chr6_3:77541800-77541819 Msa0959850:CDS 45.0%
GTAGCAATTGAAGCAGCAGA+TGG - chr6_3:77541923-77541942 None:intergenic 45.0%
! TGCTGCTTCAATTGCTACCT+TGG + chr6_3:77541925-77541944 Msa0959850:CDS 45.0%
CTTCAATTGCTACCTTGGCT+TGG + chr6_3:77541930-77541949 Msa0959850:CDS 45.0%
ACTCTTACACTGCTTGCCAT+GGG + chr6_3:77541953-77541972 Msa0959850:CDS 45.0%
GTGAGTTAGGTTTACCGGAC+CGG + chr6_3:77541690-77541709 Msa0959850:intron 50.0%
! GGTGCTGCATCGACAATTTC+AGG + chr6_3:77541860-77541879 Msa0959850:CDS 50.0%
CAGTGTAAGAGTCCAAGCCA+AGG - chr6_3:77541945-77541964 None:intergenic 50.0%
GACTCTTACACTGCTTGCCA+TGG + chr6_3:77541952-77541971 Msa0959850:CDS 50.0%
CTCTTACACTGCTTGCCATG+GGG + chr6_3:77541954-77541973 Msa0959850:CDS 50.0%
GTGAGTTAGGTTTACCGGAC+CGG + chr6_3:77541690-77541709 Msa0959850:intron 50.0%
! GGTGCTGCATCGACAATTTC+AGG + chr6_3:77541860-77541879 Msa0959850:CDS 50.0%
CAGTGTAAGAGTCCAAGCCA+AGG - chr6_3:77541945-77541964 None:intergenic 50.0%
GACTCTTACACTGCTTGCCA+TGG + chr6_3:77541952-77541971 Msa0959850:CDS 50.0%
CTCTTACACTGCTTGCCATG+GGG + chr6_3:77541954-77541973 Msa0959850:CDS 50.0%
AACCCGGTGCACTAAAGCTC+CGG + chr6_3:77542042-77542061 Msa0959850:intron 55.0%
! ATGCCGGAGCTTTAGTGCAC+CGG - chr6_3:77542048-77542067 None:intergenic 55.0%
CTAAAGCTCCGGCATACGCA+CGG + chr6_3:77542053-77542072 Msa0959850:intron 55.0%
AACCCGGTGCACTAAAGCTC+CGG + chr6_3:77542042-77542061 Msa0959850:intron 55.0%
! ATGCCGGAGCTTTAGTGCAC+CGG - chr6_3:77542048-77542067 None:intergenic 55.0%
CTAAAGCTCCGGCATACGCA+CGG + chr6_3:77542053-77542072 Msa0959850:intron 55.0%
! TGCCGGAGCTTTAGTGCACC+GGG - chr6_3:77542047-77542066 None:intergenic 60.0%
! TGCCGGAGCTTTAGTGCACC+GGG - chr6_3:77542047-77542066 None:intergenic 60.0%
TTCCCGGACCGTGCGTATGC+CGG - chr6_3:77542064-77542083 None:intergenic 65.0%
GCATACGCACGGTCCGGGAA+GGG + chr6_3:77542064-77542083 Msa0959850:intron 65.0%
CATACGCACGGTCCGGGAAG+GGG + chr6_3:77542065-77542084 Msa0959850:intron 65.0%
TTCCCGGACCGTGCGTATGC+CGG - chr6_3:77542064-77542083 None:intergenic 65.0%
GCATACGCACGGTCCGGGAA+GGG + chr6_3:77542064-77542083 Msa0959850:intron 65.0%
CATACGCACGGTCCGGGAAG+GGG + chr6_3:77542065-77542084 Msa0959850:intron 65.0%
GCTCCGGCATACGCACGGTC+CGG + chr6_3:77542058-77542077 Msa0959850:intron 70.0%
CTCCGGCATACGCACGGTCC+GGG + chr6_3:77542059-77542078 Msa0959850:intron 70.0%
GGCATACGCACGGTCCGGGA+AGG + chr6_3:77542063-77542082 Msa0959850:intron 70.0%
GCTCCGGCATACGCACGGTC+CGG + chr6_3:77542058-77542077 Msa0959850:intron 70.0%
CTCCGGCATACGCACGGTCC+GGG + chr6_3:77542059-77542078 Msa0959850:intron 70.0%
GGCATACGCACGGTCCGGGA+AGG + chr6_3:77542063-77542082 Msa0959850:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 77541463 77542798 77541463 ID=Msa0959850;Name=Msa0959850
chr6_3 mRNA 77541463 77542798 77541463 ID=Msa0959850-mRNA-1;Parent=Msa0959850;Name=Msa0959850-mRNA-1;_AED=0.16;_eAED=0.16;_QI=13|0.66|0.5|1|0.66|0.75|4|0|146
chr6_3 exon 77541463 77541587 77541463 ID=Msa0959850-mRNA-1:exon:13884;Parent=Msa0959850-mRNA-1
chr6_3 exon 77541756 77541975 77541756 ID=Msa0959850-mRNA-1:exon:13885;Parent=Msa0959850-mRNA-1
chr6_3 exon 77542605 77542617 77542605 ID=Msa0959850-mRNA-1:exon:13886;Parent=Msa0959850-mRNA-1
chr6_3 exon 77542703 77542798 77542703 ID=Msa0959850-mRNA-1:exon:13887;Parent=Msa0959850-mRNA-1
chr6_3 five_prime_UTR 77541463 77541475 77541463 ID=Msa0959850-mRNA-1:five_prime_utr;Parent=Msa0959850-mRNA-1
chr6_3 CDS 77541476 77541587 77541476 ID=Msa0959850-mRNA-1:cds;Parent=Msa0959850-mRNA-1
chr6_3 CDS 77541756 77541975 77541756 ID=Msa0959850-mRNA-1:cds;Parent=Msa0959850-mRNA-1
chr6_3 CDS 77542605 77542617 77542605 ID=Msa0959850-mRNA-1:cds;Parent=Msa0959850-mRNA-1
chr6_3 CDS 77542703 77542798 77542703 ID=Msa0959850-mRNA-1:cds;Parent=Msa0959850-mRNA-1
Gene Sequence

>Msa0959850

ATGAAGTCCATAGCAACACTTCTCTTGGTGCTCAACTTTTGCATGTATGTCATTGTTCTAGGCATTGGTGCATGGGCTATGAATAGAGCAATAGATCATGGTTTTATCATAGGTCCGGAATTAAATCTTCCAGCTCATTTTTCACCCATTTTCTTCCCAATGGGAAATGCTTCAACTGGATTCTTTGTTACGATTTCTTTGTTAGCTGGAGTAGTTGGTGCTGCATCGACAATTTCAGGAGTCAAACATATCTGTTCATGGACTGCAGAGAGCTTGCCATCTGCTGCTTCAATTGCTACCTTGGCTTGGACTCTTACACTGCTTGCCATGGGAAATGCACGTCTGAAAACCATGGAGGCTTTCATAATTATCCTTTCAGTTACACAGCTTCTCTACATAGTTGCAATTCATGGTGCTGCTGCATATAATATATATATTTGA

Protein sequence

>Msa0959850

MKSIATLLLVLNFCMYVIVLGIGAWAMNRAIDHGFIIGPELNLPAHFSPIFFPMGNASTGFFVTISLLAGVVGAASTISGVKHICSWTAESLPSAASIATLAWTLTLLAMGNARLKTMEAFIIILSVTQLLYIVAIHGAAAYNIYI*