Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831320 | XP_003610780.1 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 1.73e-137 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831320 | sp|Q1G2Y5|LTG21_ARATH | 51.366 | 183 | 79 | 4 | 26 | 208 | 27 | 199 | 7.31e-43 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831320 | G7K519 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 8.27e-138 | 393 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0831320 | 0.803952 | 2.727142e-49 | -8.615850e-47 |
| Msa0011010 | Msa0831320 | 0.811837 | 5.732523e-51 | -8.615850e-47 |
| Msa0011040 | Msa0831320 | 0.804331 | 2.274366e-49 | -8.615850e-47 |
| Msa0021870 | Msa0831320 | 0.806817 | 6.840941e-50 | -8.615850e-47 |
| Msa0024650 | Msa0831320 | 0.812467 | 4.178527e-51 | -8.615850e-47 |
| Msa0028690 | Msa0831320 | 0.805921 | 1.056883e-49 | -8.615850e-47 |
| Msa0031650 | Msa0831320 | 0.821389 | 4.144586e-53 | -8.615850e-47 |
| Msa0048380 | Msa0831320 | 0.808707 | 2.713276e-50 | -8.615850e-47 |
| Msa0060370 | Msa0831320 | 0.816403 | 5.629985e-52 | -8.615850e-47 |
| Msa0072030 | Msa0831320 | 0.808572 | 2.899402e-50 | -8.615850e-47 |
| Msa0080010 | Msa0831320 | 0.803951 | 2.728579e-49 | -8.615850e-47 |
| Msa0085710 | Msa0831320 | 0.803002 | 4.290553e-49 | -8.615850e-47 |
| Msa0093530 | Msa0831320 | 0.834822 | 2.399713e-56 | -8.615850e-47 |
| Msa0098380 | Msa0831320 | 0.805656 | 1.201261e-49 | -8.615850e-47 |
| Msa0616300 | Msa0831320 | 0.802357 | 5.829331e-49 | -8.615850e-47 |
| Msa0628200 | Msa0831320 | 0.827120 | 1.864214e-54 | -8.615850e-47 |
| Msa0629030 | Msa0831320 | 0.800882 | 1.170159e-48 | -8.615850e-47 |
| Msa0629040 | Msa0831320 | 0.804068 | 2.579125e-49 | -8.615850e-47 |
| Msa0643230 | Msa0831320 | 0.808730 | 2.683136e-50 | -8.615850e-47 |
| Msa0655370 | Msa0831320 | 0.803855 | 2.856726e-49 | -8.615850e-47 |
| Msa0658150 | Msa0831320 | 0.838271 | 3.175722e-57 | -8.615850e-47 |
| Msa0666580 | Msa0831320 | 0.803174 | 3.953262e-49 | -8.615850e-47 |
| Msa0667600 | Msa0831320 | 0.808664 | 2.771378e-50 | -8.615850e-47 |
| Msa0672780 | Msa0831320 | 0.817729 | 2.835673e-52 | -8.615850e-47 |
| Msa0677130 | Msa0831320 | 0.806538 | 7.834740e-50 | -8.615850e-47 |
| Msa0680460 | Msa0831320 | 0.817291 | 3.558502e-52 | -8.615850e-47 |
| Msa0703000 | Msa0831320 | 0.840237 | 9.815999e-58 | -8.615850e-47 |
| Msa0709790 | Msa0831320 | 0.816712 | 4.800109e-52 | -8.615850e-47 |
| Msa0716980 | Msa0831320 | 0.814455 | 1.527154e-51 | -8.615850e-47 |
| Msa0727480 | Msa0831320 | 0.806875 | 6.650527e-50 | -8.615850e-47 |
| Msa0730890 | Msa0831320 | 0.874401 | 6.954251e-68 | -8.615850e-47 |
| Msa0734080 | Msa0831320 | 0.808492 | 3.016474e-50 | -8.615850e-47 |
| Msa0734100 | Msa0831320 | 0.816484 | 5.399915e-52 | -8.615850e-47 |
| Msa0738570 | Msa0831320 | 0.827553 | 1.467822e-54 | -8.615850e-47 |
| Msa0743370 | Msa0831320 | 0.809735 | 1.633582e-50 | -8.615850e-47 |
| Msa0747710 | Msa0831320 | 0.802634 | 5.112206e-49 | -8.615850e-47 |
| Msa0773030 | Msa0831320 | 0.866110 | 3.621941e-65 | -8.615850e-47 |
| Msa0775350 | Msa0831320 | 0.827479 | 1.529773e-54 | -8.615850e-47 |
| Msa0776340 | Msa0831320 | 0.856558 | 2.965995e-62 | -8.615850e-47 |
| Msa0777210 | Msa0831320 | 0.802108 | 6.560130e-49 | -8.615850e-47 |
| Msa0783580 | Msa0831320 | 0.862899 | 3.654424e-64 | -8.615850e-47 |
| Msa0792410 | Msa0831320 | 0.804295 | 2.313143e-49 | -8.615850e-47 |
| Msa0794090 | Msa0831320 | 0.962693 | 3.504656e-121 | -8.615850e-47 |
| Msa0794100 | Msa0831320 | 0.885788 | 6.009041e-72 | -8.615850e-47 |
| Msa0795320 | Msa0831320 | 0.839652 | 1.393710e-57 | -8.615850e-47 |
| Msa0798840 | Msa0831320 | 0.830386 | 3.024353e-55 | -8.615850e-47 |
| Msa0812720 | Msa0831320 | 0.826077 | 3.305539e-54 | -8.615850e-47 |
| Msa0813840 | Msa0831320 | 0.860349 | 2.198072e-63 | -8.615850e-47 |
| Msa0814660 | Msa0831320 | 0.823204 | 1.570918e-53 | -8.615850e-47 |
| Msa0817100 | Msa0831320 | 0.800159 | 1.642718e-48 | -8.615850e-47 |
| Msa0819110 | Msa0831320 | 0.841692 | 4.071882e-58 | -8.615850e-47 |
| Msa0831310 | Msa0831320 | 0.881471 | 2.335499e-70 | -8.615850e-47 |
| Msa0831320 | Msa0847140 | 0.810871 | 9.290413e-51 | -8.615850e-47 |
| Msa0831320 | Msa0850640 | 0.818726 | 1.686354e-52 | -8.615850e-47 |
| Msa0831320 | Msa0853080 | 0.836696 | 8.042440e-57 | -8.615850e-47 |
| Msa0831320 | Msa0854380 | 0.862770 | 4.003642e-64 | -8.615850e-47 |
| Msa0831320 | Msa0854860 | 0.805114 | 1.560494e-49 | -8.615850e-47 |
| Msa0831320 | Msa0859230 | 0.824860 | 6.418889e-54 | -8.615850e-47 |
| Msa0831320 | Msa0890210 | 0.812531 | 4.046031e-51 | -8.615850e-47 |
| Msa0831320 | Msa0896920 | 0.848713 | 5.144526e-60 | -8.615850e-47 |
| Msa0831320 | Msa0896950 | 0.808949 | 2.409008e-50 | -8.615850e-47 |
| Msa0831320 | Msa0902340 | 0.813528 | 2.446045e-51 | -8.615850e-47 |
| Msa0831320 | Msa0910560 | 0.808801 | 2.590622e-50 | -8.615850e-47 |
| Msa0831320 | Msa0910590 | 0.825990 | 3.467630e-54 | -8.615850e-47 |
| Msa0831320 | Msa0910830 | 0.800499 | 1.400518e-48 | -8.615850e-47 |
| Msa0831320 | Msa0948430 | 0.820844 | 5.532941e-53 | -8.615850e-47 |
| Msa0831320 | Msa0950090 | 0.836046 | 1.176901e-56 | -8.615850e-47 |
| Msa0831320 | Msa0964510 | 0.803426 | 3.505995e-49 | -8.615850e-47 |
| Msa0831320 | Msa0975950 | 0.801333 | 9.461367e-49 | -8.615850e-47 |
| Msa0831320 | Msa0985380 | 0.819920 | 9.012340e-53 | -8.615850e-47 |
| Msa0831320 | Msa0987020 | 0.803647 | 3.155025e-49 | -8.615850e-47 |
| Msa0831320 | Msa0996980 | 0.809990 | 1.439520e-50 | -8.615850e-47 |
| Msa0831320 | Msa1024420 | 0.815832 | 7.554755e-52 | -8.615850e-47 |
| Msa0831320 | Msa1024480 | 0.810165 | 1.319980e-50 | -8.615850e-47 |
| Msa0831320 | Msa1029860 | 0.804909 | 1.722539e-49 | -8.615850e-47 |
| Msa0831320 | Msa1035050 | 0.803679 | 3.107184e-49 | -8.615850e-47 |
| Msa0831320 | Msa1040330 | 0.835856 | 1.314918e-56 | -8.615850e-47 |
| Msa0831320 | Msa1049400 | 0.801393 | 9.198685e-49 | -8.615850e-47 |
| Msa0831320 | Msa1061670 | 0.801649 | 8.151828e-49 | -8.615850e-47 |
| Msa0831320 | Msa1063260 | 0.805268 | 1.449331e-49 | -8.615850e-47 |
| Msa0831320 | Msa1075030 | 0.807469 | 4.978734e-50 | -8.615850e-47 |
| Msa0831320 | Msa1076830 | 0.801575 | 8.441994e-49 | -8.615850e-47 |
| Msa0831320 | Msa1083100 | 0.824293 | 8.728704e-54 | -8.615850e-47 |
| Msa0831320 | Msa1084340 | -0.801890 | 7.273626e-49 | -8.615850e-47 |
| Msa0831320 | Msa1087200 | 0.946832 | 2.169819e-105 | -8.615850e-47 |
| Msa0831320 | Msa1087210 | 0.889894 | 1.608285e-73 | -8.615850e-47 |
| Msa0831320 | Msa1099640 | 0.813980 | 1.945022e-51 | -8.615850e-47 |
| Msa0831320 | Msa1099650 | 0.804062 | 2.586356e-49 | -8.615850e-47 |
| Msa0831320 | Msa1108610 | 0.802656 | 5.059621e-49 | -8.615850e-47 |
| Msa0831320 | Msa1115900 | 0.812814 | 3.508352e-51 | -8.615850e-47 |
| Msa0831320 | Msa1127940 | 0.815393 | 9.457749e-52 | -8.615850e-47 |
| Msa0831320 | Msa1136630 | 0.825449 | 4.658801e-54 | -8.615850e-47 |
| Msa0831320 | Msa1136690 | 0.806699 | 7.245810e-50 | -8.615850e-47 |
| Msa0831320 | Msa1143250 | 0.831951 | 1.247346e-55 | -8.615850e-47 |
| Msa0831320 | Msa1160540 | 0.812197 | 4.785739e-51 | -8.615850e-47 |
| Msa0831320 | Msa1162370 | 0.804380 | 2.220876e-49 | -8.615850e-47 |
| Msa0831320 | Msa1165860 | 0.821932 | 3.104269e-53 | -8.615850e-47 |
| Msa0831320 | Msa1179190 | 0.815324 | 9.798630e-52 | -8.615850e-47 |
| Msa0831320 | Msa1187750 | 0.819972 | 8.768659e-53 | -8.615850e-47 |
| Msa0831320 | Msa1206330 | 0.805585 | 1.243351e-49 | -8.615850e-47 |
| Msa0831320 | Msa1206380 | 0.807902 | 4.027890e-50 | -8.615850e-47 |
| Msa0831320 | Msa1208050 | 0.802590 | 5.219966e-49 | -8.615850e-47 |
| Msa0831320 | Msa1208140 | 0.800837 | 1.195043e-48 | -8.615850e-47 |
| Msa0831320 | Msa1211940 | 0.837847 | 4.082257e-57 | -8.615850e-47 |
| Msa0831320 | Msa1212080 | 0.835517 | 1.603004e-56 | -8.615850e-47 |
| Msa0831320 | Msa1223990 | 0.815421 | 9.327176e-52 | -8.615850e-47 |
| Msa0831320 | Msa1233620 | 0.818386 | 2.013646e-52 | -8.615850e-47 |
| Msa0831320 | Msa1263110 | 0.818515 | 1.883412e-52 | -8.615850e-47 |
| Msa0831320 | Msa1263120 | 0.819505 | 1.121072e-52 | -8.615850e-47 |
| Msa0831320 | Msa1263370 | 0.800495 | 1.403285e-48 | -8.615850e-47 |
| Msa0831320 | Msa1269200 | 0.811642 | 6.320365e-51 | -8.615850e-47 |
| Msa0831320 | Msa1269500 | 0.812461 | 4.191499e-51 | -8.615850e-47 |
| Msa0831320 | Msa1273320 | 0.808952 | 2.405457e-50 | -8.615850e-47 |
| Msa0831320 | Msa1275840 | 0.812714 | 3.689062e-51 | -8.615850e-47 |
| Msa0831320 | Msa1284020 | 0.811781 | 5.895678e-51 | -8.615850e-47 |
| Msa0831320 | Msa1296490 | 0.801796 | 7.603045e-49 | -8.615850e-47 |
| Msa0831320 | Msa1314020 | 0.815909 | 7.261273e-52 | -8.615850e-47 |
| Msa0831320 | Msa1322380 | 0.817303 | 3.536754e-52 | -8.615850e-47 |
| Msa0831320 | Msa1344450 | 0.828629 | 8.085881e-55 | -8.615850e-47 |
| Msa0831320 | Msa1344930 | 0.814193 | 1.745358e-51 | -8.615850e-47 |
| Msa0831320 | Msa1362590 | 0.804796 | 1.818635e-49 | -8.615850e-47 |
| Msa0831320 | Msa1375640 | 0.806826 | 6.811101e-50 | -8.615850e-47 |
| Msa0831320 | Msa1376070 | 0.806503 | 7.970519e-50 | -8.615850e-47 |
| Msa0831320 | Msa1376520 | 0.821885 | 3.182410e-53 | -8.615850e-47 |
| Msa0831320 | Msa1376880 | 0.844260 | 8.438011e-59 | -8.615850e-47 |
| Msa0831320 | Msa1377190 | 0.800767 | 1.234882e-48 | -8.615850e-47 |
| Msa0831320 | Msa1378950 | 0.805956 | 1.039352e-49 | -8.615850e-47 |
| Msa0831320 | Msa1384130 | 0.861530 | 9.615309e-64 | -8.615850e-47 |
| Msa0831320 | Msa1390040 | 0.808383 | 3.182416e-50 | -8.615850e-47 |
| Msa0831320 | Msa1395080 | 0.840013 | 1.122589e-57 | -8.615850e-47 |
| Msa0831320 | Msa1398120 | 0.833046 | 6.678408e-56 | -8.615850e-47 |
| Msa0831320 | Msa1407810 | 0.810510 | 1.112128e-50 | -8.615850e-47 |
| Msa0831320 | Msa1409600 | 0.808505 | 2.996581e-50 | -8.615850e-47 |
| Msa0831320 | Msa1417220 | 0.823544 | 1.308491e-53 | -8.615850e-47 |
| Msa0831320 | Msa1429190 | 0.808809 | 2.580995e-50 | -8.615850e-47 |
| Msa0831320 | Msa1437780 | 0.810092 | 1.369037e-50 | -8.615850e-47 |
| Msa0831320 | Msa1462610 | 0.806768 | 7.006169e-50 | -8.615850e-47 |
| Msa0831320 | Msa1463820 | 0.929100 | 1.128029e-92 | -8.615850e-47 |
| Msa0831320 | Msa1464140 | 0.891182 | 5.017686e-74 | -8.615850e-47 |
| Msa0126960 | Msa0831320 | 0.837093 | 6.370234e-57 | -8.615850e-47 |
| Msa0143950 | Msa0831320 | 0.824763 | 6.766058e-54 | -8.615850e-47 |
| Msa0144000 | Msa0831320 | 0.820603 | 6.284536e-53 | -8.615850e-47 |
| Msa0163370 | Msa0831320 | 0.803492 | 3.396553e-49 | -8.615850e-47 |
| Msa0163690 | Msa0831320 | 0.813255 | 2.807923e-51 | -8.615850e-47 |
| Msa0168750 | Msa0831320 | 0.800928 | 1.145137e-48 | -8.615850e-47 |
| Msa0171740 | Msa0831320 | 0.822715 | 2.042605e-53 | -8.615850e-47 |
| Msa0189990 | Msa0831320 | 0.825293 | 5.072398e-54 | -8.615850e-47 |
| Msa0195190 | Msa0831320 | 0.802083 | 6.639503e-49 | -8.615850e-47 |
| Msa0199440 | Msa0831320 | 0.838872 | 2.221378e-57 | -8.615850e-47 |
| Msa0205050 | Msa0831320 | 0.805992 | 1.020973e-49 | -8.615850e-47 |
| Msa0219810 | Msa0831320 | 0.803726 | 3.037575e-49 | -8.615850e-47 |
| Msa0230920 | Msa0831320 | 0.801725 | 7.862526e-49 | -8.615850e-47 |
| Msa0238330 | Msa0831320 | 0.802435 | 5.617308e-49 | -8.615850e-47 |
| Msa0412560 | Msa0831320 | 0.804345 | 2.259167e-49 | -8.615850e-47 |
| Msa0414480 | Msa0831320 | 0.826060 | 3.337655e-54 | -8.615850e-47 |
| Msa0415010 | Msa0831320 | 0.812117 | 4.981234e-51 | -8.615850e-47 |
| Msa0418230 | Msa0831320 | 0.837565 | 4.821976e-57 | -8.615850e-47 |
| Msa0434910 | Msa0831320 | 0.826003 | 3.442018e-54 | -8.615850e-47 |
| Msa0459930 | Msa0831320 | 0.822582 | 2.193155e-53 | -8.615850e-47 |
| Msa0464620 | Msa0831320 | 0.863955 | 1.720363e-64 | -8.615850e-47 |
| Msa0240580 | Msa0831320 | 0.822979 | 1.772259e-53 | -8.615850e-47 |
| Msa0244310 | Msa0831320 | 0.810792 | 9.665741e-51 | -8.615850e-47 |
| Msa0245660 | Msa0831320 | 0.802636 | 5.106993e-49 | -8.615850e-47 |
| Msa0247780 | Msa0831320 | 0.864959 | 8.355001e-65 | -8.615850e-47 |
| Msa0248320 | Msa0831320 | 0.807928 | 3.976829e-50 | -8.615850e-47 |
| Msa0278960 | Msa0831320 | 0.813409 | 2.597903e-51 | -8.615850e-47 |
| Msa0280160 | Msa0831320 | 0.847710 | 9.732773e-60 | -8.615850e-47 |
| Msa0307630 | Msa0831320 | 0.804592 | 2.006636e-49 | -8.615850e-47 |
| Msa0325260 | Msa0831320 | 0.857068 | 2.099657e-62 | -8.615850e-47 |
| Msa0331190 | Msa0831320 | 0.841973 | 3.434089e-58 | -8.615850e-47 |
| Msa0333770 | Msa0831320 | 0.805410 | 1.353098e-49 | -8.615850e-47 |
| Msa0356270 | Msa0831320 | 0.813552 | 2.415965e-51 | -8.615850e-47 |
| Msa0357510 | Msa0831320 | 0.803670 | 3.120381e-49 | -8.615850e-47 |
| Msa0487110 | Msa0831320 | 0.808927 | 2.434703e-50 | -8.615850e-47 |
| Msa0510050 | Msa0831320 | 0.844651 | 6.624188e-59 | -8.615850e-47 |
| Msa0531040 | Msa0831320 | 0.823337 | 1.462345e-53 | -8.615850e-47 |
| Msa0531080 | Msa0831320 | 0.803628 | 3.183393e-49 | -8.615850e-47 |
| Msa0538650 | Msa0831320 | 0.810915 | 9.092252e-51 | -8.615850e-47 |
| Msa0540640 | Msa0831320 | 0.803172 | 3.957554e-49 | -8.615850e-47 |
| Msa0548790 | Msa0831320 | 0.803813 | 2.914465e-49 | -8.615850e-47 |
| Msa0554660 | Msa0831320 | 0.801961 | 7.033386e-49 | -8.615850e-47 |
| Msa0561830 | Msa0831320 | 0.803207 | 3.891631e-49 | -8.615850e-47 |
| Msa0566490 | Msa0831320 | 0.826806 | 2.216083e-54 | -8.615850e-47 |
| Msa0567570 | Msa0831320 | 0.818360 | 2.041390e-52 | -8.615850e-47 |
| Msa0568920 | Msa0831320 | 0.803827 | 2.894586e-49 | -8.615850e-47 |
| Msa0576320 | Msa0831320 | 0.806804 | 6.886705e-50 | -8.615850e-47 |
| Msa0587920 | Msa0831320 | 0.804956 | 1.684263e-49 | -8.615850e-47 |
| Msa0587930 | Msa0831320 | 0.832204 | 1.080229e-55 | -8.615850e-47 |
| Msa0588040 | Msa0831320 | 0.806087 | 9.753497e-50 | -8.615850e-47 |
| Msa0594470 | Msa0831320 | 0.874536 | 6.253193e-68 | -8.615850e-47 |
| Msa0597800 | Msa0831320 | 0.806170 | 9.369193e-50 | -8.615850e-47 |
| Msa0597820 | Msa0831320 | 0.800552 | 1.365923e-48 | -8.615850e-47 |
| Msa0602100 | Msa0831320 | 0.815640 | 8.337012e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831320 | MtrunA17_Chr5g0394991 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 1.59e-141 | 393 |
| Msa0831320 | MtrunA17_Chr1g0205171 | 52.727 | 220 | 93 | 5 | 1 | 212 | 1 | 217 | 3.28e-63 | 195 |
| Msa0831320 | MtrunA17_Chr1g0185311 | 44.375 | 160 | 78 | 7 | 1 | 156 | 1 | 153 | 1.83e-32 | 116 |
| Msa0831320 | MtrunA17_Chr7g0260071 | 41.096 | 146 | 70 | 5 | 8 | 147 | 7 | 142 | 5.26e-17 | 76.3 |
| Msa0831320 | MtrunA17_Chr5g0395001 | 35.433 | 127 | 71 | 6 | 1 | 125 | 1 | 118 | 6.29e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0831320 | AT1G05450.2 | 51.366 | 183 | 79 | 4 | 26 | 208 | 27 | 199 | 7.43e-44 | 146 |
| Msa0831320 | AT3G22620.1 | 43.750 | 208 | 103 | 6 | 10 | 212 | 5 | 203 | 8.98e-39 | 133 |
| Msa0831320 | AT2G48140.1 | 41.667 | 204 | 103 | 7 | 12 | 210 | 7 | 199 | 1.55e-34 | 122 |
| Msa0831320 | AT2G48140.2 | 53.913 | 115 | 47 | 3 | 12 | 123 | 7 | 118 | 2.02e-33 | 117 |
| Msa0831320 | AT3G22600.1 | 35.766 | 137 | 71 | 6 | 1 | 129 | 1 | 128 | 6.03e-13 | 64.7 |
| Msa0831320 | AT2G48130.2 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0831320 | AT2G48130.6 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0831320 | AT2G48130.4 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0831320 | AT2G48130.5 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0831320 | AT2G48130.1 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0831320 | AT2G48130.3 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
Find 82 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGTTTGGACCCATAT+TGG | 0.216171 | 5_4:+4340688 | Msa0831320:three_prime_UTR |
| TTGACAGGACCGGCGTCTTT+CGG | 0.267890 | 5_4:+4340055 | Msa0831320:intron |
| AAACCAATACCACCCCAATA+TGG | 0.274848 | 5_4:-4340702 | None:intergenic |
| GACCCATATTGGGGTGGTAT+TGG | 0.297176 | 5_4:+4340699 | Msa0831320:three_prime_UTR |
| AAATTGTTTGGACCCATATT+GGG | 0.299454 | 5_4:+4340689 | Msa0831320:three_prime_UTR |
| CAGATCAGAGCGGCCACTTC+CGG | 0.318856 | 5_4:-4340489 | None:intergenic |
| TAGTCTCCTACTATCTGTTT+TGG | 0.329233 | 5_4:+4340541 | Msa0831320:CDS |
| TTAAAACACTACTAGGTTAC+TGG | 0.335706 | 5_4:+4340581 | Msa0831320:exon |
| GACAACAATACAAATGTCTT+TGG | 0.336756 | 5_4:-4340728 | None:intergenic |
| ATGTTTATGTTATAGAGTTT+TGG | 0.356717 | 5_4:-4339457 | None:intergenic |
| CTCTATAACATAAACATAGA+TGG | 0.357921 | 5_4:+4339463 | Msa0831320:exon |
| AATATGTTTGGCTATATTGC+AGG | 0.361101 | 5_4:+4340653 | Msa0831320:three_prime_UTR |
| GGCGTTGCAGATGGAATATC+AGG | 0.363139 | 5_4:-4340467 | None:intergenic |
| ATAGGTAGTTGCAATATGTT+TGG | 0.375312 | 5_4:+4340641 | Msa0831320:three_prime_UTR |
| GGGTTCGCTGATGGAGATAA+TGG | 0.387464 | 5_4:-4340446 | None:intergenic |
| ATAGCTAAGGTTCTATTGAT+TGG | 0.389392 | 5_4:-4339749 | None:intergenic |
| TTCTATATTAAAACACTACT+AGG | 0.400865 | 5_4:+4340574 | Msa0831320:CDS |
| GGCTCACCGCTTCCTGCTCC+AGG | 0.422121 | 5_4:+4339947 | Msa0831320:CDS |
| GATCTGACTCCATCATCTGC+TGG | 0.433930 | 5_4:+4340506 | Msa0831320:CDS |
| GAAACTCAAGCAAGGGCTAA+TGG | 0.441100 | 5_4:-4339600 | None:intergenic |
| CCTCGTGCTTGTAACTTGCC+TGG | 0.444455 | 5_4:+4339779 | Msa0831320:CDS |
| AACCAATACCACCCCAATAT+GGG | 0.447031 | 5_4:-4340701 | None:intergenic |
| CCACTTCCGGGCGTTGCAGA+TGG | 0.451493 | 5_4:-4340476 | None:intergenic |
| CTATTGATTGGTAATGCAAA+AGG | 0.452479 | 5_4:-4339737 | None:intergenic |
| GTTAGCCGTGGCTTCGATCA+TGG | 0.462490 | 5_4:+4339520 | Msa0831320:CDS |
| CTAAGAGATGGTGTCAATGC+AGG | 0.465399 | 5_4:-4340091 | None:intergenic |
| TGATACATTAAAATCAATAG+AGG | 0.466281 | 5_4:-4340613 | None:intergenic |
| CTTACCATTGATATGTTACA+TGG | 0.470781 | 5_4:-4339572 | None:intergenic |
| CAATGACCAAAACAGATAGT+AGG | 0.505531 | 5_4:-4340547 | None:intergenic |
| GATAATGGATTGGTTGTCTC+AGG | 0.511804 | 5_4:-4340431 | None:intergenic |
| TTTGTTGTGTTTAAGAGTGA+AGG | 0.513809 | 5_4:-4339411 | None:intergenic |
| ATCCTTGCTTCCACTTGTGA+GGG | 0.516520 | 5_4:-4339684 | None:intergenic |
| CCATCTGCAACGCCCGGAAG+TGG | 0.516819 | 5_4:+4340476 | Msa0831320:CDS |
| GATGATGATCCAGCAGATGA+TGG | 0.519019 | 5_4:-4340515 | None:intergenic |
| AATCCTTGCTTCCACTTGTG+AGG | 0.527769 | 5_4:-4339685 | None:intergenic |
| GGAATATCAGGGTTCGCTGA+TGG | 0.537454 | 5_4:-4340455 | None:intergenic |
| AGAGAAGGTGTCACTGGTGA+GGG | 0.537488 | 5_4:-4340398 | None:intergenic |
| CCACGGCTAACACCACAGTT+AGG | 0.542248 | 5_4:-4339508 | None:intergenic |
| CGCTGATGGAGATAATGGAT+TGG | 0.542515 | 5_4:-4340441 | None:intergenic |
| GATATTCCATCTGCAACGCC+CGG | 0.544541 | 5_4:+4340470 | Msa0831320:CDS |
| CTCACAAATAGTAGTGGCAA+TGG | 0.545441 | 5_4:+4339623 | Msa0831320:CDS |
| CGTCGCGGTTTACCTGGAGC+AGG | 0.545706 | 5_4:-4339959 | None:intergenic |
| TAAGAGATGGTGTCAATGCA+GGG | 0.547995 | 5_4:-4340090 | None:intergenic |
| GACCCTCACAAGTGGAAGCA+AGG | 0.549047 | 5_4:+4339682 | Msa0831320:CDS |
| CATTGCCACTACTATTTGTG+AGG | 0.549899 | 5_4:-4339622 | None:intergenic |
| GTCGTGATTTGAGCGTAGGC+TGG | 0.551456 | 5_4:-4339548 | None:intergenic |
| GTTTGGCTATATTGCAGGGA+GGG | 0.557553 | 5_4:+4340658 | Msa0831320:three_prime_UTR |
| TGTATGTGTCTTATTGCCAC+TGG | 0.565408 | 5_4:+4339707 | Msa0831320:CDS |
| GGATTGGTTGTCTCAGGCTG+TGG | 0.565431 | 5_4:-4340425 | None:intergenic |
| GGTTTACCTGGAGCAGGAAG+CGG | 0.566105 | 5_4:-4339953 | None:intergenic |
| GACGCCATGTAACATATCAA+TGG | 0.568392 | 5_4:+4339568 | Msa0831320:CDS |
| AATTGTTTGGACCCATATTG+GGG | 0.569765 | 5_4:+4340690 | Msa0831320:three_prime_UTR |
| TTGCATTGAAGTGGAACACC+AGG | 0.570114 | 5_4:-4339797 | None:intergenic |
| GTATTGTTGTCTATTATGTG+TGG | 0.572144 | 5_4:+4340740 | Msa0831320:three_prime_UTR |
| ACACCATCTCTTAGTCCTCA+AGG | 0.573546 | 5_4:+4340100 | Msa0831320:CDS |
| GCAGCAATCAGCAGTGGGTG+AGG | 0.573593 | 5_4:-4339648 | None:intergenic |
| TGGCGTCGTGATTTGAGCGT+AGG | 0.576088 | 5_4:-4339552 | None:intergenic |
| GCAATCAAGACCCTCACAAG+TGG | 0.578959 | 5_4:+4339674 | Msa0831320:CDS |
| CAGAGAAGGTGTCACTGGTG+AGG | 0.580166 | 5_4:-4340399 | None:intergenic |
| ATATGTTTGGCTATATTGCA+GGG | 0.593280 | 5_4:+4340654 | Msa0831320:three_prime_UTR |
| AGTTTCCTCACAAATAGTAG+TGG | 0.606601 | 5_4:+4339617 | Msa0831320:CDS |
| TGCAGCCATGATCGAAGCCA+CGG | 0.611380 | 5_4:-4339525 | None:intergenic |
| GTCAATGCAGGGGAAAGAGA+TGG | 0.612748 | 5_4:-4340079 | None:intergenic |
| CCTAACTGTGGTGTTAGCCG+TGG | 0.613375 | 5_4:+4339508 | Msa0831320:CDS |
| GGTGACAGAGAAGGTGTCAC+TGG | 0.619445 | 5_4:-4340404 | None:intergenic |
| AGAGATGGCCCGAAAGACGC+CGG | 0.622383 | 5_4:-4340064 | None:intergenic |
| TGTTTGGACCCATATTGGGG+TGG | 0.623606 | 5_4:+4340693 | Msa0831320:three_prime_UTR |
| TTGTGAGGAAACTCAAGCAA+GGG | 0.634401 | 5_4:-4339607 | None:intergenic |
| ACGAGGAAGAGAGATAGCTA+AGG | 0.635982 | 5_4:-4339762 | None:intergenic |
| GTACCTTGAGGACTAAGAGA+TGG | 0.638083 | 5_4:-4340103 | None:intergenic |
| GCATTGCAGCAATCAGCAGT+GGG | 0.640694 | 5_4:-4339653 | None:intergenic |
| TTTGTGAGGAAACTCAAGCA+AGG | 0.643831 | 5_4:-4339608 | None:intergenic |
| GTCTCTCTACCGCCTAACTG+TGG | 0.648382 | 5_4:+4339496 | Msa0831320:CDS |
| TCAGGCTGTGGTGACAGAGA+AGG | 0.649180 | 5_4:-4340413 | None:intergenic |
| TGCATTGCAGCAATCAGCAG+TGG | 0.654060 | 5_4:-4339654 | None:intergenic |
| AAGAGATGGTGTCAATGCAG+GGG | 0.669299 | 5_4:-4340089 | None:intergenic |
| GCGTTGCAGATGGAATATCA+GGG | 0.683696 | 5_4:-4340466 | None:intergenic |
| CCAGGCAAGTTACAAGCACG+AGG | 0.683819 | 5_4:-4339779 | None:intergenic |
| TGCAAAAGGAACATTGCCAG+TGG | 0.683851 | 5_4:-4339723 | None:intergenic |
| CGGCTAACACCACAGTTAGG+CGG | 0.689758 | 5_4:-4339505 | None:intergenic |
| TGTTTGGCTATATTGCAGGG+AGG | 0.699618 | 5_4:+4340657 | Msa0831320:three_prime_UTR |
| ATGATGGAGTCAGATCAGAG+CGG | 0.809779 | 5_4:-4340499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAATAATAGTAATTTTT+AGG | - | chr5_4:4340000-4340019 | None:intergenic | 10.0% |
| !!! | TTTTAATGTATCAAATTAAT+AGG | + | chr5_4:4340623-4340642 | Msa0831320:three_prime_UTR | 10.0% |
| !!! | GAAAAATAATAGTAATTTTT+AGG | - | chr5_4:4340000-4340019 | None:intergenic | 10.0% |
| !!! | TTTTAATGTATCAAATTAAT+AGG | + | chr5_4:4340623-4340642 | Msa0831320:three_prime_UTR | 10.0% |
| !! | AAAATAAAGAATGAAGATTT+AGG | - | chr5_4:4339834-4339853 | None:intergenic | 15.0% |
| !!! | ATAAATATGGTTTTAAATTG+CGG | - | chr5_4:4340298-4340317 | None:intergenic | 15.0% |
| !! | AAAATAAAGAATGAAGATTT+AGG | - | chr5_4:4339834-4339853 | None:intergenic | 15.0% |
| !!! | ATAAATATGGTTTTAAATTG+CGG | - | chr5_4:4340298-4340317 | None:intergenic | 15.0% |
| !!! | TTATAGAGTTTTGGTTTTTT+GGG | - | chr5_4:4339451-4339470 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTTATAGAGTTT+TGG | - | chr5_4:4339460-4339479 | None:intergenic | 20.0% |
| !! | TTAGTGATCAACTATAAATA+TGG | - | chr5_4:4340311-4340330 | None:intergenic | 20.0% |
| !! | TTCTATATTAAAACACTACT+AGG | + | chr5_4:4340574-4340593 | Msa0831320:CDS | 20.0% |
| !! | TGATACATTAAAATCAATAG+AGG | - | chr5_4:4340616-4340635 | None:intergenic | 20.0% |
| !!! | TTATAGAGTTTTGGTTTTTT+GGG | - | chr5_4:4339451-4339470 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTTATAGAGTTT+TGG | - | chr5_4:4339460-4339479 | None:intergenic | 20.0% |
| !! | TTAGTGATCAACTATAAATA+TGG | - | chr5_4:4340311-4340330 | None:intergenic | 20.0% |
| !! | TTCTATATTAAAACACTACT+AGG | + | chr5_4:4340574-4340593 | Msa0831320:CDS | 20.0% |
| !! | TGATACATTAAAATCAATAG+AGG | - | chr5_4:4340616-4340635 | None:intergenic | 20.0% |
| !!! | TATAGAGTTTTGGTTTTTTG+GGG | - | chr5_4:4339450-4339469 | None:intergenic | 25.0% |
| !!! | GTTATAGAGTTTTGGTTTTT+TGG | - | chr5_4:4339452-4339471 | None:intergenic | 25.0% |
| ! | CTCTATAACATAAACATAGA+TGG | + | chr5_4:4339463-4339482 | Msa0831320:exon | 25.0% |
| ! | AGAGTAATTGACAAATAGAA+TGG | - | chr5_4:4339896-4339915 | None:intergenic | 25.0% |
| !!! | TCATTTTGACTTATATTGAC+AGG | + | chr5_4:4340040-4340059 | Msa0831320:intron | 25.0% |
| !!! | GTGAAAAATTGTTTTTGATG+CGG | + | chr5_4:4340198-4340217 | Msa0831320:intron | 25.0% |
| !!! | TATAGAGTTTTGGTTTTTTG+GGG | - | chr5_4:4339450-4339469 | None:intergenic | 25.0% |
| !!! | GTTATAGAGTTTTGGTTTTT+TGG | - | chr5_4:4339452-4339471 | None:intergenic | 25.0% |
| ! | CTCTATAACATAAACATAGA+TGG | + | chr5_4:4339463-4339482 | Msa0831320:exon | 25.0% |
| ! | AGAGTAATTGACAAATAGAA+TGG | - | chr5_4:4339896-4339915 | None:intergenic | 25.0% |
| !!! | TCATTTTGACTTATATTGAC+AGG | + | chr5_4:4340040-4340059 | Msa0831320:intron | 25.0% |
| !!! | GTGAAAAATTGTTTTTGATG+CGG | + | chr5_4:4340198-4340217 | Msa0831320:intron | 25.0% |
| ! | TTTGTTGTGTTTAAGAGTGA+AGG | - | chr5_4:4339414-4339433 | None:intergenic | 30.0% |
| CTTACCATTGATATGTTACA+TGG | - | chr5_4:4339575-4339594 | None:intergenic | 30.0% | |
| !! | CTATTGATTGGTAATGCAAA+AGG | - | chr5_4:4339740-4339759 | None:intergenic | 30.0% |
| ATAGCTAAGGTTCTATTGAT+TGG | - | chr5_4:4339752-4339771 | None:intergenic | 30.0% | |
| CTCAAGGTACATATTACTTA+CGG | + | chr5_4:4340116-4340135 | Msa0831320:intron | 30.0% | |
| !!! | TCACCTTTTTTTCATTGAAC+AGG | + | chr5_4:4340362-4340381 | Msa0831320:intron | 30.0% |
| GAACCTGTTCAATGAAAAAA+AGG | - | chr5_4:4340368-4340387 | None:intergenic | 30.0% | |
| TTAAAACACTACTAGGTTAC+TGG | + | chr5_4:4340581-4340600 | Msa0831320:exon | 30.0% | |
| ATAGGTAGTTGCAATATGTT+TGG | + | chr5_4:4340641-4340660 | Msa0831320:three_prime_UTR | 30.0% | |
| AATATGTTTGGCTATATTGC+AGG | + | chr5_4:4340653-4340672 | Msa0831320:three_prime_UTR | 30.0% | |
| ATATGTTTGGCTATATTGCA+GGG | + | chr5_4:4340654-4340673 | Msa0831320:three_prime_UTR | 30.0% | |
| AAATTGTTTGGACCCATATT+GGG | + | chr5_4:4340689-4340708 | Msa0831320:three_prime_UTR | 30.0% | |
| GACAACAATACAAATGTCTT+TGG | - | chr5_4:4340731-4340750 | None:intergenic | 30.0% | |
| GTATTGTTGTCTATTATGTG+TGG | + | chr5_4:4340740-4340759 | Msa0831320:three_prime_UTR | 30.0% | |
| ! | TTTGTTGTGTTTAAGAGTGA+AGG | - | chr5_4:4339414-4339433 | None:intergenic | 30.0% |
| CTTACCATTGATATGTTACA+TGG | - | chr5_4:4339575-4339594 | None:intergenic | 30.0% | |
| !! | CTATTGATTGGTAATGCAAA+AGG | - | chr5_4:4339740-4339759 | None:intergenic | 30.0% |
| ATAGCTAAGGTTCTATTGAT+TGG | - | chr5_4:4339752-4339771 | None:intergenic | 30.0% | |
| CTCAAGGTACATATTACTTA+CGG | + | chr5_4:4340116-4340135 | Msa0831320:intron | 30.0% | |
| !!! | TCACCTTTTTTTCATTGAAC+AGG | + | chr5_4:4340362-4340381 | Msa0831320:intron | 30.0% |
| GAACCTGTTCAATGAAAAAA+AGG | - | chr5_4:4340368-4340387 | None:intergenic | 30.0% | |
| TTAAAACACTACTAGGTTAC+TGG | + | chr5_4:4340581-4340600 | Msa0831320:exon | 30.0% | |
| ATAGGTAGTTGCAATATGTT+TGG | + | chr5_4:4340641-4340660 | Msa0831320:three_prime_UTR | 30.0% | |
| AATATGTTTGGCTATATTGC+AGG | + | chr5_4:4340653-4340672 | Msa0831320:three_prime_UTR | 30.0% | |
| ATATGTTTGGCTATATTGCA+GGG | + | chr5_4:4340654-4340673 | Msa0831320:three_prime_UTR | 30.0% | |
| AAATTGTTTGGACCCATATT+GGG | + | chr5_4:4340689-4340708 | Msa0831320:three_prime_UTR | 30.0% | |
| GACAACAATACAAATGTCTT+TGG | - | chr5_4:4340731-4340750 | None:intergenic | 30.0% | |
| GTATTGTTGTCTATTATGTG+TGG | + | chr5_4:4340740-4340759 | Msa0831320:three_prime_UTR | 30.0% | |
| AGTTTCCTCACAAATAGTAG+TGG | + | chr5_4:4339617-4339636 | Msa0831320:CDS | 35.0% | |
| !! | AGAGTACTTTTGCATTGAAG+TGG | - | chr5_4:4339809-4339828 | None:intergenic | 35.0% |
| TTGACTTATATTGACAGGAC+CGG | + | chr5_4:4340045-4340064 | Msa0831320:intron | 35.0% | |
| CGTAAGTAATATGTACCTTG+AGG | - | chr5_4:4340118-4340137 | None:intergenic | 35.0% | |
| GTACATATTACTTACGGTCA+AGG | + | chr5_4:4340122-4340141 | Msa0831320:intron | 35.0% | |
| ! | AAGGTTCTAACTTGTAGTTG+CGG | + | chr5_4:4340141-4340160 | Msa0831320:intron | 35.0% |
| CTTCTGTAACCTTTACATTG+TGG | + | chr5_4:4340253-4340272 | Msa0831320:intron | 35.0% | |
| ! | TAGTCTCCTACTATCTGTTT+TGG | + | chr5_4:4340541-4340560 | Msa0831320:CDS | 35.0% |
| CAATGACCAAAACAGATAGT+AGG | - | chr5_4:4340550-4340569 | None:intergenic | 35.0% | |
| !!! | CTACTATCTGTTTTGGTCAT+TGG | + | chr5_4:4340548-4340567 | Msa0831320:CDS | 35.0% |
| ! | AGGGTTTTGCTCAAATTGTT+TGG | + | chr5_4:4340677-4340696 | Msa0831320:three_prime_UTR | 35.0% |
| CAAATTGTTTGGACCCATAT+TGG | + | chr5_4:4340688-4340707 | Msa0831320:three_prime_UTR | 35.0% | |
| AATTGTTTGGACCCATATTG+GGG | + | chr5_4:4340690-4340709 | Msa0831320:three_prime_UTR | 35.0% | |
| AGTTTCCTCACAAATAGTAG+TGG | + | chr5_4:4339617-4339636 | Msa0831320:CDS | 35.0% | |
| !! | AGAGTACTTTTGCATTGAAG+TGG | - | chr5_4:4339809-4339828 | None:intergenic | 35.0% |
| TTGACTTATATTGACAGGAC+CGG | + | chr5_4:4340045-4340064 | Msa0831320:intron | 35.0% | |
| CGTAAGTAATATGTACCTTG+AGG | - | chr5_4:4340118-4340137 | None:intergenic | 35.0% | |
| GTACATATTACTTACGGTCA+AGG | + | chr5_4:4340122-4340141 | Msa0831320:intron | 35.0% | |
| ! | AAGGTTCTAACTTGTAGTTG+CGG | + | chr5_4:4340141-4340160 | Msa0831320:intron | 35.0% |
| CTTCTGTAACCTTTACATTG+TGG | + | chr5_4:4340253-4340272 | Msa0831320:intron | 35.0% | |
| ! | TAGTCTCCTACTATCTGTTT+TGG | + | chr5_4:4340541-4340560 | Msa0831320:CDS | 35.0% |
| CAATGACCAAAACAGATAGT+AGG | - | chr5_4:4340550-4340569 | None:intergenic | 35.0% | |
| !!! | CTACTATCTGTTTTGGTCAT+TGG | + | chr5_4:4340548-4340567 | Msa0831320:CDS | 35.0% |
| ! | AGGGTTTTGCTCAAATTGTT+TGG | + | chr5_4:4340677-4340696 | Msa0831320:three_prime_UTR | 35.0% |
| CAAATTGTTTGGACCCATAT+TGG | + | chr5_4:4340688-4340707 | Msa0831320:three_prime_UTR | 35.0% | |
| AATTGTTTGGACCCATATTG+GGG | + | chr5_4:4340690-4340709 | Msa0831320:three_prime_UTR | 35.0% | |
| GACGCCATGTAACATATCAA+TGG | + | chr5_4:4339568-4339587 | Msa0831320:CDS | 40.0% | |
| TTGTGAGGAAACTCAAGCAA+GGG | - | chr5_4:4339610-4339629 | None:intergenic | 40.0% | |
| TTTGTGAGGAAACTCAAGCA+AGG | - | chr5_4:4339611-4339630 | None:intergenic | 40.0% | |
| CATTGCCACTACTATTTGTG+AGG | - | chr5_4:4339625-4339644 | None:intergenic | 40.0% | |
| CTCACAAATAGTAGTGGCAA+TGG | + | chr5_4:4339623-4339642 | Msa0831320:CDS | 40.0% | |
| ! | TGTATGTGTCTTATTGCCAC+TGG | + | chr5_4:4339707-4339726 | Msa0831320:CDS | 40.0% |
| !! | TTTGTTGTTCTCTGCAGCTT+CGG | + | chr5_4:4339925-4339944 | Msa0831320:intron | 40.0% |
| ! | TAAGAGATGGTGTCAATGCA+GGG | - | chr5_4:4340093-4340112 | None:intergenic | 40.0% |
| !! | GATAATGGATTGGTTGTCTC+AGG | - | chr5_4:4340434-4340453 | None:intergenic | 40.0% |
| AACCAATACCACCCCAATAT+GGG | - | chr5_4:4340704-4340723 | None:intergenic | 40.0% | |
| AAACCAATACCACCCCAATA+TGG | - | chr5_4:4340705-4340724 | None:intergenic | 40.0% | |
| GACGCCATGTAACATATCAA+TGG | + | chr5_4:4339568-4339587 | Msa0831320:CDS | 40.0% | |
| TTGTGAGGAAACTCAAGCAA+GGG | - | chr5_4:4339610-4339629 | None:intergenic | 40.0% | |
| TTTGTGAGGAAACTCAAGCA+AGG | - | chr5_4:4339611-4339630 | None:intergenic | 40.0% | |
| CATTGCCACTACTATTTGTG+AGG | - | chr5_4:4339625-4339644 | None:intergenic | 40.0% | |
| CTCACAAATAGTAGTGGCAA+TGG | + | chr5_4:4339623-4339642 | Msa0831320:CDS | 40.0% | |
| ! | TGTATGTGTCTTATTGCCAC+TGG | + | chr5_4:4339707-4339726 | Msa0831320:CDS | 40.0% |
| !! | TTTGTTGTTCTCTGCAGCTT+CGG | + | chr5_4:4339925-4339944 | Msa0831320:intron | 40.0% |
| ! | TAAGAGATGGTGTCAATGCA+GGG | - | chr5_4:4340093-4340112 | None:intergenic | 40.0% |
| !! | GATAATGGATTGGTTGTCTC+AGG | - | chr5_4:4340434-4340453 | None:intergenic | 40.0% |
| AACCAATACCACCCCAATAT+GGG | - | chr5_4:4340704-4340723 | None:intergenic | 40.0% | |
| AAACCAATACCACCCCAATA+TGG | - | chr5_4:4340705-4340724 | None:intergenic | 40.0% | |
| GAAACTCAAGCAAGGGCTAA+TGG | - | chr5_4:4339603-4339622 | None:intergenic | 45.0% | |
| ATCCTTGCTTCCACTTGTGA+GGG | - | chr5_4:4339687-4339706 | None:intergenic | 45.0% | |
| AATCCTTGCTTCCACTTGTG+AGG | - | chr5_4:4339688-4339707 | None:intergenic | 45.0% | |
| TGCAAAAGGAACATTGCCAG+TGG | - | chr5_4:4339726-4339745 | None:intergenic | 45.0% | |
| ACGAGGAAGAGAGATAGCTA+AGG | - | chr5_4:4339765-4339784 | None:intergenic | 45.0% | |
| TTGCATTGAAGTGGAACACC+AGG | - | chr5_4:4339800-4339819 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCTCTGCAGCTTC+GGG | + | chr5_4:4339926-4339945 | Msa0831320:intron | 45.0% |
| !! | CATAATAGAGTGTTGCGTCG+CGG | - | chr5_4:4339977-4339996 | None:intergenic | 45.0% |
| ! | AAGAGATGGTGTCAATGCAG+GGG | - | chr5_4:4340092-4340111 | None:intergenic | 45.0% |
| ! | CTAAGAGATGGTGTCAATGC+AGG | - | chr5_4:4340094-4340113 | None:intergenic | 45.0% |
| ACACCATCTCTTAGTCCTCA+AGG | + | chr5_4:4340100-4340119 | Msa0831320:CDS | 45.0% | |
| GTACCTTGAGGACTAAGAGA+TGG | - | chr5_4:4340106-4340125 | None:intergenic | 45.0% | |
| ! | TTTTGATGCGGCCACAATTG+TGG | + | chr5_4:4340210-4340229 | Msa0831320:intron | 45.0% |
| !! | CGCTGATGGAGATAATGGAT+TGG | - | chr5_4:4340444-4340463 | None:intergenic | 45.0% |
| GCGTTGCAGATGGAATATCA+GGG | - | chr5_4:4340469-4340488 | None:intergenic | 45.0% | |
| ! | ATGATGGAGTCAGATCAGAG+CGG | - | chr5_4:4340502-4340521 | None:intergenic | 45.0% |
| GATGATGATCCAGCAGATGA+TGG | - | chr5_4:4340518-4340537 | None:intergenic | 45.0% | |
| TGTTTGGCTATATTGCAGGG+AGG | + | chr5_4:4340657-4340676 | Msa0831320:three_prime_UTR | 45.0% | |
| GTTTGGCTATATTGCAGGGA+GGG | + | chr5_4:4340658-4340677 | Msa0831320:three_prime_UTR | 45.0% | |
| GAAACTCAAGCAAGGGCTAA+TGG | - | chr5_4:4339603-4339622 | None:intergenic | 45.0% | |
| ATCCTTGCTTCCACTTGTGA+GGG | - | chr5_4:4339687-4339706 | None:intergenic | 45.0% | |
| AATCCTTGCTTCCACTTGTG+AGG | - | chr5_4:4339688-4339707 | None:intergenic | 45.0% | |
| TGCAAAAGGAACATTGCCAG+TGG | - | chr5_4:4339726-4339745 | None:intergenic | 45.0% | |
| ACGAGGAAGAGAGATAGCTA+AGG | - | chr5_4:4339765-4339784 | None:intergenic | 45.0% | |
| TTGCATTGAAGTGGAACACC+AGG | - | chr5_4:4339800-4339819 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCTCTGCAGCTTC+GGG | + | chr5_4:4339926-4339945 | Msa0831320:intron | 45.0% |
| !! | CATAATAGAGTGTTGCGTCG+CGG | - | chr5_4:4339977-4339996 | None:intergenic | 45.0% |
| ! | AAGAGATGGTGTCAATGCAG+GGG | - | chr5_4:4340092-4340111 | None:intergenic | 45.0% |
| ! | CTAAGAGATGGTGTCAATGC+AGG | - | chr5_4:4340094-4340113 | None:intergenic | 45.0% |
| ACACCATCTCTTAGTCCTCA+AGG | + | chr5_4:4340100-4340119 | Msa0831320:CDS | 45.0% | |
| GTACCTTGAGGACTAAGAGA+TGG | - | chr5_4:4340106-4340125 | None:intergenic | 45.0% | |
| ! | TTTTGATGCGGCCACAATTG+TGG | + | chr5_4:4340210-4340229 | Msa0831320:intron | 45.0% |
| !! | CGCTGATGGAGATAATGGAT+TGG | - | chr5_4:4340444-4340463 | None:intergenic | 45.0% |
| GCGTTGCAGATGGAATATCA+GGG | - | chr5_4:4340469-4340488 | None:intergenic | 45.0% | |
| ! | ATGATGGAGTCAGATCAGAG+CGG | - | chr5_4:4340502-4340521 | None:intergenic | 45.0% |
| GATGATGATCCAGCAGATGA+TGG | - | chr5_4:4340518-4340537 | None:intergenic | 45.0% | |
| TGTTTGGCTATATTGCAGGG+AGG | + | chr5_4:4340657-4340676 | Msa0831320:three_prime_UTR | 45.0% | |
| GTTTGGCTATATTGCAGGGA+GGG | + | chr5_4:4340658-4340677 | Msa0831320:three_prime_UTR | 45.0% | |
| GCATTGCAGCAATCAGCAGT+GGG | - | chr5_4:4339656-4339675 | None:intergenic | 50.0% | |
| TGCATTGCAGCAATCAGCAG+TGG | - | chr5_4:4339657-4339676 | None:intergenic | 50.0% | |
| GCAATCAAGACCCTCACAAG+TGG | + | chr5_4:4339674-4339693 | Msa0831320:CDS | 50.0% | |
| GTCAATGCAGGGGAAAGAGA+TGG | - | chr5_4:4340082-4340101 | None:intergenic | 50.0% | |
| ! | CTAACTTGTAGTTGCGGTCG+TGG | + | chr5_4:4340147-4340166 | Msa0831320:intron | 50.0% |
| CTAGAGCTCGACCACAATTG+TGG | - | chr5_4:4340224-4340243 | None:intergenic | 50.0% | |
| CTACTGCGGCCACAATGTAA+AGG | - | chr5_4:4340265-4340284 | None:intergenic | 50.0% | |
| !! | AGAGAAGGTGTCACTGGTGA+GGG | - | chr5_4:4340401-4340420 | None:intergenic | 50.0% |
| GGGTTCGCTGATGGAGATAA+TGG | - | chr5_4:4340449-4340468 | None:intergenic | 50.0% | |
| GGAATATCAGGGTTCGCTGA+TGG | - | chr5_4:4340458-4340477 | None:intergenic | 50.0% | |
| GGCGTTGCAGATGGAATATC+AGG | - | chr5_4:4340470-4340489 | None:intergenic | 50.0% | |
| GATATTCCATCTGCAACGCC+CGG | + | chr5_4:4340470-4340489 | Msa0831320:CDS | 50.0% | |
| GATCTGACTCCATCATCTGC+TGG | + | chr5_4:4340506-4340525 | Msa0831320:CDS | 50.0% | |
| TGTTTGGACCCATATTGGGG+TGG | + | chr5_4:4340693-4340712 | Msa0831320:three_prime_UTR | 50.0% | |
| GACCCATATTGGGGTGGTAT+TGG | + | chr5_4:4340699-4340718 | Msa0831320:three_prime_UTR | 50.0% | |
| GCATTGCAGCAATCAGCAGT+GGG | - | chr5_4:4339656-4339675 | None:intergenic | 50.0% | |
| TGCATTGCAGCAATCAGCAG+TGG | - | chr5_4:4339657-4339676 | None:intergenic | 50.0% | |
| GCAATCAAGACCCTCACAAG+TGG | + | chr5_4:4339674-4339693 | Msa0831320:CDS | 50.0% | |
| GTCAATGCAGGGGAAAGAGA+TGG | - | chr5_4:4340082-4340101 | None:intergenic | 50.0% | |
| ! | CTAACTTGTAGTTGCGGTCG+TGG | + | chr5_4:4340147-4340166 | Msa0831320:intron | 50.0% |
| CTAGAGCTCGACCACAATTG+TGG | - | chr5_4:4340224-4340243 | None:intergenic | 50.0% | |
| CTACTGCGGCCACAATGTAA+AGG | - | chr5_4:4340265-4340284 | None:intergenic | 50.0% | |
| !! | AGAGAAGGTGTCACTGGTGA+GGG | - | chr5_4:4340401-4340420 | None:intergenic | 50.0% |
| GGGTTCGCTGATGGAGATAA+TGG | - | chr5_4:4340449-4340468 | None:intergenic | 50.0% | |
| GGAATATCAGGGTTCGCTGA+TGG | - | chr5_4:4340458-4340477 | None:intergenic | 50.0% | |
| GGCGTTGCAGATGGAATATC+AGG | - | chr5_4:4340470-4340489 | None:intergenic | 50.0% | |
| GATATTCCATCTGCAACGCC+CGG | + | chr5_4:4340470-4340489 | Msa0831320:CDS | 50.0% | |
| GATCTGACTCCATCATCTGC+TGG | + | chr5_4:4340506-4340525 | Msa0831320:CDS | 50.0% | |
| TGTTTGGACCCATATTGGGG+TGG | + | chr5_4:4340693-4340712 | Msa0831320:three_prime_UTR | 50.0% | |
| GACCCATATTGGGGTGGTAT+TGG | + | chr5_4:4340699-4340718 | Msa0831320:three_prime_UTR | 50.0% | |
| GTCTCTCTACCGCCTAACTG+TGG | + | chr5_4:4339496-4339515 | Msa0831320:CDS | 55.0% | |
| CGGCTAACACCACAGTTAGG+CGG | - | chr5_4:4339508-4339527 | None:intergenic | 55.0% | |
| CCACGGCTAACACCACAGTT+AGG | - | chr5_4:4339511-4339530 | None:intergenic | 55.0% | |
| ! | CCTAACTGTGGTGTTAGCCG+TGG | + | chr5_4:4339508-4339527 | Msa0831320:CDS | 55.0% |
| GTTAGCCGTGGCTTCGATCA+TGG | + | chr5_4:4339520-4339539 | Msa0831320:CDS | 55.0% | |
| TGCAGCCATGATCGAAGCCA+CGG | - | chr5_4:4339528-4339547 | None:intergenic | 55.0% | |
| GTCGTGATTTGAGCGTAGGC+TGG | - | chr5_4:4339551-4339570 | None:intergenic | 55.0% | |
| TGGCGTCGTGATTTGAGCGT+AGG | - | chr5_4:4339555-4339574 | None:intergenic | 55.0% | |
| GACCCTCACAAGTGGAAGCA+AGG | + | chr5_4:4339682-4339701 | Msa0831320:CDS | 55.0% | |
| CCAGGCAAGTTACAAGCACG+AGG | - | chr5_4:4339782-4339801 | None:intergenic | 55.0% | |
| ! | CCTCGTGCTTGTAACTTGCC+TGG | + | chr5_4:4339779-4339798 | Msa0831320:CDS | 55.0% |
| GGTTTACCTGGAGCAGGAAG+CGG | - | chr5_4:4339956-4339975 | None:intergenic | 55.0% | |
| TTGACAGGACCGGCGTCTTT+CGG | + | chr5_4:4340055-4340074 | Msa0831320:intron | 55.0% | |
| GCGGTCAGCAACTACTACTG+CGG | - | chr5_4:4340279-4340298 | None:intergenic | 55.0% | |
| !! | CAGAGAAGGTGTCACTGGTG+AGG | - | chr5_4:4340402-4340421 | None:intergenic | 55.0% |
| !! | GGTGACAGAGAAGGTGTCAC+TGG | - | chr5_4:4340407-4340426 | None:intergenic | 55.0% |
| TCAGGCTGTGGTGACAGAGA+AGG | - | chr5_4:4340416-4340435 | None:intergenic | 55.0% | |
| !! | GGATTGGTTGTCTCAGGCTG+TGG | - | chr5_4:4340428-4340447 | None:intergenic | 55.0% |
| GTCTCTCTACCGCCTAACTG+TGG | + | chr5_4:4339496-4339515 | Msa0831320:CDS | 55.0% | |
| CGGCTAACACCACAGTTAGG+CGG | - | chr5_4:4339508-4339527 | None:intergenic | 55.0% | |
| CCACGGCTAACACCACAGTT+AGG | - | chr5_4:4339511-4339530 | None:intergenic | 55.0% | |
| ! | CCTAACTGTGGTGTTAGCCG+TGG | + | chr5_4:4339508-4339527 | Msa0831320:CDS | 55.0% |
| GTTAGCCGTGGCTTCGATCA+TGG | + | chr5_4:4339520-4339539 | Msa0831320:CDS | 55.0% | |
| TGCAGCCATGATCGAAGCCA+CGG | - | chr5_4:4339528-4339547 | None:intergenic | 55.0% | |
| GTCGTGATTTGAGCGTAGGC+TGG | - | chr5_4:4339551-4339570 | None:intergenic | 55.0% | |
| TGGCGTCGTGATTTGAGCGT+AGG | - | chr5_4:4339555-4339574 | None:intergenic | 55.0% | |
| GACCCTCACAAGTGGAAGCA+AGG | + | chr5_4:4339682-4339701 | Msa0831320:CDS | 55.0% | |
| CCAGGCAAGTTACAAGCACG+AGG | - | chr5_4:4339782-4339801 | None:intergenic | 55.0% | |
| ! | CCTCGTGCTTGTAACTTGCC+TGG | + | chr5_4:4339779-4339798 | Msa0831320:CDS | 55.0% |
| GGTTTACCTGGAGCAGGAAG+CGG | - | chr5_4:4339956-4339975 | None:intergenic | 55.0% | |
| TTGACAGGACCGGCGTCTTT+CGG | + | chr5_4:4340055-4340074 | Msa0831320:intron | 55.0% | |
| GCGGTCAGCAACTACTACTG+CGG | - | chr5_4:4340279-4340298 | None:intergenic | 55.0% | |
| !! | CAGAGAAGGTGTCACTGGTG+AGG | - | chr5_4:4340402-4340421 | None:intergenic | 55.0% |
| !! | GGTGACAGAGAAGGTGTCAC+TGG | - | chr5_4:4340407-4340426 | None:intergenic | 55.0% |
| TCAGGCTGTGGTGACAGAGA+AGG | - | chr5_4:4340416-4340435 | None:intergenic | 55.0% | |
| !! | GGATTGGTTGTCTCAGGCTG+TGG | - | chr5_4:4340428-4340447 | None:intergenic | 55.0% |
| GCAGCAATCAGCAGTGGGTG+AGG | - | chr5_4:4339651-4339670 | None:intergenic | 60.0% | |
| GTGTTGCGTCGCGGTTTACC+TGG | - | chr5_4:4339968-4339987 | None:intergenic | 60.0% | |
| TGACAGGACCGGCGTCTTTC+GGG | + | chr5_4:4340056-4340075 | Msa0831320:intron | 60.0% | |
| AGAGATGGCCCGAAAGACGC+CGG | - | chr5_4:4340067-4340086 | None:intergenic | 60.0% | |
| AGATCAGAGCGGCCACTTCC+GGG | - | chr5_4:4340491-4340510 | None:intergenic | 60.0% | |
| CAGATCAGAGCGGCCACTTC+CGG | - | chr5_4:4340492-4340511 | None:intergenic | 60.0% | |
| GCAGCAATCAGCAGTGGGTG+AGG | - | chr5_4:4339651-4339670 | None:intergenic | 60.0% | |
| GTGTTGCGTCGCGGTTTACC+TGG | - | chr5_4:4339968-4339987 | None:intergenic | 60.0% | |
| TGACAGGACCGGCGTCTTTC+GGG | + | chr5_4:4340056-4340075 | Msa0831320:intron | 60.0% | |
| AGAGATGGCCCGAAAGACGC+CGG | - | chr5_4:4340067-4340086 | None:intergenic | 60.0% | |
| AGATCAGAGCGGCCACTTCC+GGG | - | chr5_4:4340491-4340510 | None:intergenic | 60.0% | |
| CAGATCAGAGCGGCCACTTC+CGG | - | chr5_4:4340492-4340511 | None:intergenic | 60.0% | |
| CGTCGCGGTTTACCTGGAGC+AGG | - | chr5_4:4339962-4339981 | None:intergenic | 65.0% | |
| ! | CCACTTCCGGGCGTTGCAGA+TGG | - | chr5_4:4340479-4340498 | None:intergenic | 65.0% |
| CCATCTGCAACGCCCGGAAG+TGG | + | chr5_4:4340476-4340495 | Msa0831320:CDS | 65.0% | |
| CGTCGCGGTTTACCTGGAGC+AGG | - | chr5_4:4339962-4339981 | None:intergenic | 65.0% | |
| ! | CCACTTCCGGGCGTTGCAGA+TGG | - | chr5_4:4340479-4340498 | None:intergenic | 65.0% |
| CCATCTGCAACGCCCGGAAG+TGG | + | chr5_4:4340476-4340495 | Msa0831320:CDS | 65.0% | |
| GGCTCACCGCTTCCTGCTCC+AGG | + | chr5_4:4339947-4339966 | Msa0831320:CDS | 70.0% | |
| GGCTCACCGCTTCCTGCTCC+AGG | + | chr5_4:4339947-4339966 | Msa0831320:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 4339390 | 4340788 | 4339390 | ID=Msa0831320;Name=Msa0831320 |
| chr5_4 | mRNA | 4339390 | 4340788 | 4339390 | ID=Msa0831320-mRNA-1;Parent=Msa0831320;Name=Msa0831320-mRNA-1;_AED=0.09;_eAED=0.09;_QI=92|1|1|1|1|1|4|193|212 |
| chr5_4 | exon | 4339390 | 4339821 | 4339390 | ID=Msa0831320-mRNA-1:exon:1771;Parent=Msa0831320-mRNA-1 |
| chr5_4 | exon | 4339942 | 4339968 | 4339942 | ID=Msa0831320-mRNA-1:exon:1772;Parent=Msa0831320-mRNA-1 |
| chr5_4 | exon | 4340062 | 4340121 | 4340062 | ID=Msa0831320-mRNA-1:exon:1773;Parent=Msa0831320-mRNA-1 |
| chr5_4 | exon | 4340384 | 4340788 | 4340384 | ID=Msa0831320-mRNA-1:exon:1774;Parent=Msa0831320-mRNA-1 |
| chr5_4 | five_prime_UTR | 4339390 | 4339481 | 4339390 | ID=Msa0831320-mRNA-1:five_prime_utr;Parent=Msa0831320-mRNA-1 |
| chr5_4 | CDS | 4339482 | 4339821 | 4339482 | ID=Msa0831320-mRNA-1:cds;Parent=Msa0831320-mRNA-1 |
| chr5_4 | CDS | 4339942 | 4339968 | 4339942 | ID=Msa0831320-mRNA-1:cds;Parent=Msa0831320-mRNA-1 |
| chr5_4 | CDS | 4340062 | 4340121 | 4340062 | ID=Msa0831320-mRNA-1:cds;Parent=Msa0831320-mRNA-1 |
| chr5_4 | CDS | 4340384 | 4340595 | 4340384 | ID=Msa0831320-mRNA-1:cds;Parent=Msa0831320-mRNA-1 |
| chr5_4 | three_prime_UTR | 4340596 | 4340788 | 4340596 | ID=Msa0831320-mRNA-1:three_prime_utr;Parent=Msa0831320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
