Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1087200 | XP_003610780.1 | 87.736 | 212 | 6 | 1 | 1 | 192 | 1 | 212 | 1.85e-121 | 352 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1087200 | sp|Q9LJ85|LTG20_ARATH | 42.574 | 202 | 94 | 6 | 10 | 192 | 5 | 203 | 3.19e-34 | 123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1087200 | G7K519 | 87.736 | 212 | 6 | 1 | 1 | 192 | 1 | 212 | 8.84e-122 | 352 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004940 | Msa1087200 | 0.801508 | 8.710629e-49 | -8.615850e-47 |
Msa0011010 | Msa1087200 | 0.822300 | 2.550567e-53 | -8.615850e-47 |
Msa0011040 | Msa1087200 | 0.813917 | 2.007326e-51 | -8.615850e-47 |
Msa0011510 | Msa1087200 | 0.814931 | 1.198254e-51 | -8.615850e-47 |
Msa0021870 | Msa1087200 | 0.805946 | 1.044036e-49 | -8.615850e-47 |
Msa0024650 | Msa1087200 | 0.809249 | 2.077649e-50 | -8.615850e-47 |
Msa0025560 | Msa1087200 | 0.806489 | 8.024522e-50 | -8.615850e-47 |
Msa0028690 | Msa1087200 | 0.807661 | 4.531838e-50 | -8.615850e-47 |
Msa0030760 | Msa1087200 | -0.802501 | 5.445621e-49 | -8.615850e-47 |
Msa0031650 | Msa1087200 | 0.834197 | 3.444608e-56 | -8.615850e-47 |
Msa0038010 | Msa1087200 | 0.804565 | 2.032379e-49 | -8.615850e-47 |
Msa0048380 | Msa1087200 | 0.814443 | 1.536409e-51 | -8.615850e-47 |
Msa0053040 | Msa1087200 | 0.800766 | 1.235765e-48 | -8.615850e-47 |
Msa0060370 | Msa1087200 | 0.814713 | 1.339281e-51 | -8.615850e-47 |
Msa0073110 | Msa1087200 | 0.801426 | 9.056330e-49 | -8.615850e-47 |
Msa0078160 | Msa1087200 | -0.806453 | 8.167838e-50 | -8.615850e-47 |
Msa0085710 | Msa1087200 | 0.816682 | 4.875675e-52 | -8.615850e-47 |
Msa0093530 | Msa1087200 | 0.829099 | 6.222391e-55 | -8.615850e-47 |
Msa0098380 | Msa1087200 | 0.809037 | 2.306331e-50 | -8.615850e-47 |
Msa0616300 | Msa1087200 | 0.804016 | 2.644785e-49 | -8.615850e-47 |
Msa0622890 | Msa1087200 | 0.803069 | 4.157129e-49 | -8.615850e-47 |
Msa0628200 | Msa1087200 | 0.843337 | 1.490751e-58 | -8.615850e-47 |
Msa0643230 | Msa1087200 | 0.824053 | 9.939890e-54 | -8.615850e-47 |
Msa0652590 | Msa1087200 | 0.800603 | 1.333749e-48 | -8.615850e-47 |
Msa0655370 | Msa1087200 | 0.806044 | 9.959631e-50 | -8.615850e-47 |
Msa0658150 | Msa1087200 | 0.841713 | 4.021754e-58 | -8.615850e-47 |
Msa0672780 | Msa1087200 | 0.833537 | 5.038749e-56 | -8.615850e-47 |
Msa0677130 | Msa1087200 | 0.805901 | 1.067387e-49 | -8.615850e-47 |
Msa0677250 | Msa1087200 | -0.801627 | 8.233905e-49 | -8.615850e-47 |
Msa0680460 | Msa1087200 | 0.814288 | 1.663115e-51 | -8.615850e-47 |
Msa0685080 | Msa1087200 | 0.811330 | 7.388049e-51 | -8.615850e-47 |
Msa0703000 | Msa1087200 | 0.842603 | 2.337965e-58 | -8.615850e-47 |
Msa0708020 | Msa1087200 | 0.807714 | 4.415640e-50 | -8.615850e-47 |
Msa0709790 | Msa1087200 | 0.803935 | 2.748839e-49 | -8.615850e-47 |
Msa0716980 | Msa1087200 | 0.805489 | 1.302514e-49 | -8.615850e-47 |
Msa0727480 | Msa1087200 | 0.800277 | 1.554341e-48 | -8.615850e-47 |
Msa0730890 | Msa1087200 | 0.866967 | 1.934980e-65 | -8.615850e-47 |
Msa0738570 | Msa1087200 | 0.824445 | 8.040877e-54 | -8.615850e-47 |
Msa0743370 | Msa1087200 | 0.804377 | 2.224763e-49 | -8.615850e-47 |
Msa0747710 | Msa1087200 | 0.807340 | 5.302138e-50 | -8.615850e-47 |
Msa0750790 | Msa1087200 | 0.805291 | 1.432715e-49 | -8.615850e-47 |
Msa0758150 | Msa1087200 | 0.811977 | 5.344692e-51 | -8.615850e-47 |
Msa0772160 | Msa1087200 | -0.801683 | 8.020204e-49 | -8.615850e-47 |
Msa0773030 | Msa1087200 | 0.858416 | 8.361667e-63 | -8.615850e-47 |
Msa0776340 | Msa1087200 | 0.862311 | 5.544062e-64 | -8.615850e-47 |
Msa0776590 | Msa1087200 | -0.816181 | 6.312534e-52 | -8.615850e-47 |
Msa0777600 | Msa1087200 | 0.813301 | 2.742718e-51 | -8.615850e-47 |
Msa0783580 | Msa1087200 | 0.851971 | 6.268736e-61 | -8.615850e-47 |
Msa0792410 | Msa1087200 | 0.814229 | 1.713935e-51 | -8.615850e-47 |
Msa0794090 | Msa1087200 | 0.935550 | 7.105951e-97 | -8.615850e-47 |
Msa0794100 | Msa1087200 | 0.889697 | 1.920714e-73 | -8.615850e-47 |
Msa0795320 | Msa1087200 | 0.835408 | 1.707149e-56 | -8.615850e-47 |
Msa0798840 | Msa1087200 | 0.813363 | 2.658633e-51 | -8.615850e-47 |
Msa0812720 | Msa1087200 | 0.810708 | 1.007906e-50 | -8.615850e-47 |
Msa0813840 | Msa1087200 | 0.840974 | 6.293691e-58 | -8.615850e-47 |
Msa0814660 | Msa1087200 | 0.827964 | 1.169796e-54 | -8.615850e-47 |
Msa0817100 | Msa1087200 | 0.814102 | 1.827980e-51 | -8.615850e-47 |
Msa0819110 | Msa1087200 | 0.844019 | 9.796364e-59 | -8.615850e-47 |
Msa0831310 | Msa1087200 | 0.872270 | 3.617985e-67 | -8.615850e-47 |
Msa0831320 | Msa1087200 | 0.946832 | 2.169819e-105 | -8.615850e-47 |
Msa0841930 | Msa1087200 | 0.803792 | 2.943413e-49 | -8.615850e-47 |
Msa0121320 | Msa1087200 | 0.805009 | 1.641452e-49 | -8.615850e-47 |
Msa0126960 | Msa1087200 | 0.830711 | 2.518339e-55 | -8.615850e-47 |
Msa0132250 | Msa1087200 | 0.801564 | 8.484158e-49 | -8.615850e-47 |
Msa0143950 | Msa1087200 | 0.828755 | 7.538531e-55 | -8.615850e-47 |
Msa0144000 | Msa1087200 | 0.817216 | 3.700201e-52 | -8.615850e-47 |
Msa0163340 | Msa1087200 | 0.800897 | 1.161639e-48 | -8.615850e-47 |
Msa0163370 | Msa1087200 | 0.803240 | 3.830686e-49 | -8.615850e-47 |
Msa0163690 | Msa1087200 | 0.834409 | 3.047275e-56 | -8.615850e-47 |
Msa0171740 | Msa1087200 | 0.831712 | 1.428856e-55 | -8.615850e-47 |
Msa0175060 | Msa1087200 | 0.802424 | 5.647308e-49 | -8.615850e-47 |
Msa0179830 | Msa1087200 | 0.804610 | 1.989247e-49 | -8.615850e-47 |
Msa0186510 | Msa1087200 | -0.828511 | 8.633459e-55 | -8.615850e-47 |
Msa0188560 | Msa1087200 | 0.801403 | 9.151736e-49 | -8.615850e-47 |
Msa0189990 | Msa1087200 | 0.827453 | 1.551483e-54 | -8.615850e-47 |
Msa0199440 | Msa1087200 | 0.823757 | 1.166580e-53 | -8.615850e-47 |
Msa0219810 | Msa1087200 | 0.819587 | 1.074150e-52 | -8.615850e-47 |
Msa0227970 | Msa1087200 | -0.801165 | 1.023968e-48 | -8.615850e-47 |
Msa0230920 | Msa1087200 | 0.811389 | 7.174728e-51 | -8.615850e-47 |
Msa0234150 | Msa1087200 | 0.802245 | 6.148266e-49 | -8.615850e-47 |
Msa0366510 | Msa1087200 | 0.803180 | 3.942959e-49 | -8.615850e-47 |
Msa0367350 | Msa1087200 | 0.806899 | 6.573103e-50 | -8.615850e-47 |
Msa0368620 | Msa1087200 | 0.802641 | 5.095266e-49 | -8.615850e-47 |
Msa0385770 | Msa1087200 | -0.815978 | 7.007222e-52 | -8.615850e-47 |
Msa0414480 | Msa1087200 | 0.824126 | 9.557974e-54 | -8.615850e-47 |
Msa0415010 | Msa1087200 | 0.805586 | 1.242676e-49 | -8.615850e-47 |
Msa0418230 | Msa1087200 | 0.839506 | 1.521042e-57 | -8.615850e-47 |
Msa0426030 | Msa1087200 | 0.804318 | 2.288715e-49 | -8.615850e-47 |
Msa0434910 | Msa1087200 | 0.813464 | 2.526385e-51 | -8.615850e-47 |
Msa0459930 | Msa1087200 | 0.817929 | 2.555211e-52 | -8.615850e-47 |
Msa0464620 | Msa1087200 | 0.856127 | 3.969384e-62 | -8.615850e-47 |
Msa0469770 | Msa1087200 | -0.807974 | 3.888524e-50 | -8.615850e-47 |
Msa0469840 | Msa1087200 | -0.801580 | 8.421518e-49 | -8.615850e-47 |
Msa0480260 | Msa1087200 | 0.801510 | 8.704375e-49 | -8.615850e-47 |
Msa0985380 | Msa1087200 | 0.816059 | 6.720283e-52 | -8.615850e-47 |
Msa0987020 | Msa1087200 | 0.800751 | 1.244230e-48 | -8.615850e-47 |
Msa0996980 | Msa1087200 | 0.808777 | 2.621346e-50 | -8.615850e-47 |
Msa0996990 | Msa1087200 | 0.803680 | 3.106053e-49 | -8.615850e-47 |
Msa1024420 | Msa1087200 | 0.811571 | 6.549561e-51 | -8.615850e-47 |
Msa1024480 | Msa1087200 | 0.843187 | 1.634504e-58 | -8.615850e-47 |
Msa1029860 | Msa1087200 | 0.823693 | 1.207405e-53 | -8.615850e-47 |
Msa1035880 | Msa1087200 | 0.811417 | 7.073745e-51 | -8.615850e-47 |
Msa1040330 | Msa1087200 | 0.850558 | 1.570817e-60 | -8.615850e-47 |
Msa1047340 | Msa1087200 | 0.800061 | 1.719512e-48 | -8.615850e-47 |
Msa1049400 | Msa1087200 | 0.806039 | 9.980745e-50 | -8.615850e-47 |
Msa1061670 | Msa1087200 | 0.808551 | 2.929332e-50 | -8.615850e-47 |
Msa1075030 | Msa1087200 | 0.816196 | 6.265098e-52 | -8.615850e-47 |
Msa1076830 | Msa1087200 | 0.800222 | 1.594706e-48 | -8.615850e-47 |
Msa1083100 | Msa1087200 | 0.842941 | 1.901420e-58 | -8.615850e-47 |
Msa1087200 | Msa1087210 | 0.890677 | 7.932272e-74 | -8.615850e-47 |
Msa1087200 | Msa1107220 | 0.804027 | 2.630888e-49 | -8.615850e-47 |
Msa1087200 | Msa1107520 | 0.817398 | 3.366174e-52 | -8.615850e-47 |
Msa1087200 | Msa1115900 | 0.817779 | 2.762194e-52 | -8.615850e-47 |
Msa1087200 | Msa1124220 | 0.803023 | 4.247897e-49 | -8.615850e-47 |
Msa1087200 | Msa1127940 | 0.824546 | 7.613198e-54 | -8.615850e-47 |
Msa1087200 | Msa1136630 | 0.800015 | 1.756725e-48 | -8.615850e-47 |
Msa1087200 | Msa1136690 | 0.825301 | 5.051324e-54 | -8.615850e-47 |
Msa1087200 | Msa1143250 | 0.817146 | 3.837175e-52 | -8.615850e-47 |
Msa1087200 | Msa1150760 | 0.801323 | 9.506846e-49 | -8.615850e-47 |
Msa1087200 | Msa1154250 | -0.810593 | 1.067310e-50 | -8.615850e-47 |
Msa1087200 | Msa1160540 | 0.816878 | 4.407319e-52 | -8.615850e-47 |
Msa1087200 | Msa1162370 | 0.805985 | 1.024664e-49 | -8.615850e-47 |
Msa1087200 | Msa1163300 | 0.808081 | 3.689511e-50 | -8.615850e-47 |
Msa1087200 | Msa1165860 | 0.833098 | 6.481561e-56 | -8.615850e-47 |
Msa1087200 | Msa1179190 | 0.815522 | 8.854924e-52 | -8.615850e-47 |
Msa1087200 | Msa1187750 | 0.842936 | 1.907317e-58 | -8.615850e-47 |
Msa1087200 | Msa1191270 | 0.812034 | 5.194038e-51 | -8.615850e-47 |
Msa1087200 | Msa1206330 | 0.803085 | 4.124381e-49 | -8.615850e-47 |
Msa1087200 | Msa1206380 | 0.802533 | 5.363299e-49 | -8.615850e-47 |
Msa1087200 | Msa1211940 | 0.820807 | 5.644030e-53 | -8.615850e-47 |
Msa1087200 | Msa1212080 | 0.833378 | 5.519735e-56 | -8.615850e-47 |
Msa1087200 | Msa1220720 | 0.801620 | 8.262748e-49 | -8.615850e-47 |
Msa1087200 | Msa1223710 | 0.809590 | 1.755508e-50 | -8.615850e-47 |
Msa1087200 | Msa1223960 | 0.812501 | 4.108157e-51 | -8.615850e-47 |
Msa1087200 | Msa1223990 | 0.823857 | 1.104789e-53 | -8.615850e-47 |
Msa1087200 | Msa1224310 | -0.800849 | 1.187962e-48 | -8.615850e-47 |
Msa1087200 | Msa1233620 | 0.822941 | 1.809677e-53 | -8.615850e-47 |
Msa1087200 | Msa1259570 | 0.800825 | 1.201877e-48 | -8.615850e-47 |
Msa1087200 | Msa1263110 | 0.821424 | 4.067529e-53 | -8.615850e-47 |
Msa1087200 | Msa1263120 | 0.819344 | 1.220204e-52 | -8.615850e-47 |
Msa1087200 | Msa1263370 | 0.810581 | 1.073313e-50 | -8.615850e-47 |
Msa1087200 | Msa1265570 | 0.807604 | 4.660694e-50 | -8.615850e-47 |
Msa1087200 | Msa1269200 | 0.839196 | 1.830860e-57 | -8.615850e-47 |
Msa1087200 | Msa1269500 | 0.804711 | 1.894831e-49 | -8.615850e-47 |
Msa1087200 | Msa1273320 | 0.816845 | 4.481716e-52 | -8.615850e-47 |
Msa1087200 | Msa1275840 | 0.819232 | 1.294283e-52 | -8.615850e-47 |
Msa1087200 | Msa1314020 | 0.819981 | 8.728220e-53 | -8.615850e-47 |
Msa1087200 | Msa1322380 | 0.808680 | 2.750068e-50 | -8.615850e-47 |
Msa1087200 | Msa1334670 | 0.809102 | 2.233050e-50 | -8.615850e-47 |
Msa1087200 | Msa1339490 | 0.802970 | 4.357276e-49 | -8.615850e-47 |
Msa1087200 | Msa1344450 | 0.829663 | 4.538775e-55 | -8.615850e-47 |
Msa1087200 | Msa1344930 | 0.802857 | 4.596867e-49 | -8.615850e-47 |
Msa1087200 | Msa1349420 | 0.811629 | 6.361533e-51 | -8.615850e-47 |
Msa1087200 | Msa1362520 | 0.806371 | 8.498128e-50 | -8.615850e-47 |
Msa1087200 | Msa1362590 | 0.830146 | 3.461903e-55 | -8.615850e-47 |
Msa1087200 | Msa1363690 | 0.809540 | 1.798733e-50 | -8.615850e-47 |
Msa1087200 | Msa1365230 | 0.813685 | 2.258348e-51 | -8.615850e-47 |
Msa1087200 | Msa1375640 | 0.813714 | 2.225563e-51 | -8.615850e-47 |
Msa1087200 | Msa1376070 | 0.805039 | 1.618354e-49 | -8.615850e-47 |
Msa1087200 | Msa1376520 | 0.838360 | 3.012449e-57 | -8.615850e-47 |
Msa1087200 | Msa1376880 | 0.832412 | 9.592073e-56 | -8.615850e-47 |
Msa1087200 | Msa1377190 | 0.823437 | 1.385642e-53 | -8.615850e-47 |
Msa1087200 | Msa1378950 | 0.824513 | 7.751243e-54 | -8.615850e-47 |
Msa1087200 | Msa1384130 | 0.843109 | 1.715254e-58 | -8.615850e-47 |
Msa1087200 | Msa1390040 | 0.824599 | 7.397707e-54 | -8.615850e-47 |
Msa1087200 | Msa1395080 | 0.842842 | 2.020180e-58 | -8.615850e-47 |
Msa1087200 | Msa1396550 | 0.814754 | 1.311665e-51 | -8.615850e-47 |
Msa1087200 | Msa1398120 | 0.816214 | 6.205561e-52 | -8.615850e-47 |
Msa1087200 | Msa1407810 | 0.800788 | 1.222892e-48 | -8.615850e-47 |
Msa1087200 | Msa1409600 | 0.825354 | 4.906798e-54 | -8.615850e-47 |
Msa1087200 | Msa1417220 | 0.823525 | 1.321961e-53 | -8.615850e-47 |
Msa1087200 | Msa1418010 | -0.802030 | 6.805258e-49 | -8.615850e-47 |
Msa1087200 | Msa1429190 | 0.818470 | 1.927485e-52 | -8.615850e-47 |
Msa1087200 | Msa1430630 | -0.810926 | 9.040059e-51 | -8.615850e-47 |
Msa1087200 | Msa1437780 | 0.802750 | 4.837958e-49 | -8.615850e-47 |
Msa1087200 | Msa1451690 | -0.816733 | 4.748604e-52 | -8.615850e-47 |
Msa1087200 | Msa1459610 | 0.810139 | 1.336883e-50 | -8.615850e-47 |
Msa1087200 | Msa1462610 | 0.816899 | 4.358257e-52 | -8.615850e-47 |
Msa1087200 | Msa1463820 | 0.969840 | 1.021242e-130 | -8.615850e-47 |
Msa1087200 | Msa1464140 | 0.883629 | 3.815413e-71 | -8.615850e-47 |
Msa0240580 | Msa1087200 | 0.800504 | 1.396999e-48 | -8.615850e-47 |
Msa0243970 | Msa1087200 | 0.806781 | 6.961825e-50 | -8.615850e-47 |
Msa0244310 | Msa1087200 | 0.819343 | 1.220908e-52 | -8.615850e-47 |
Msa0245660 | Msa1087200 | 0.810993 | 8.742239e-51 | -8.615850e-47 |
Msa0247780 | Msa1087200 | 0.846749 | 1.786405e-59 | -8.615850e-47 |
Msa0275730 | Msa1087200 | 0.801703 | 7.945015e-49 | -8.615850e-47 |
Msa0278920 | Msa1087200 | 0.808697 | 2.726915e-50 | -8.615850e-47 |
Msa0280160 | Msa1087200 | 0.832381 | 9.764685e-56 | -8.615850e-47 |
Msa0282830 | Msa1087200 | 0.802068 | 6.683896e-49 | -8.615850e-47 |
Msa0287480 | Msa1087200 | 0.800786 | 1.224162e-48 | -8.615850e-47 |
Msa0307630 | Msa1087200 | 0.814209 | 1.730739e-51 | -8.615850e-47 |
Msa0325260 | Msa1087200 | 0.837308 | 5.611072e-57 | -8.615850e-47 |
Msa0331190 | Msa1087200 | 0.826544 | 2.559663e-54 | -8.615850e-47 |
Msa0336520 | Msa1087200 | 0.801998 | 6.910609e-49 | -8.615850e-47 |
Msa0336640 | Msa1087200 | 0.814291 | 1.660048e-51 | -8.615850e-47 |
Msa0351890 | Msa1087200 | 0.806255 | 8.991235e-50 | -8.615850e-47 |
Msa0356250 | Msa1087200 | 0.805227 | 1.477576e-49 | -8.615850e-47 |
Msa0356270 | Msa1087200 | 0.808070 | 3.710270e-50 | -8.615850e-47 |
Msa0357470 | Msa1087200 | 0.813242 | 2.825938e-51 | -8.615850e-47 |
Msa0357510 | Msa1087200 | 0.812700 | 3.714995e-51 | -8.615850e-47 |
Msa0357530 | Msa1087200 | 0.806122 | 9.590123e-50 | -8.615850e-47 |
Msa0487110 | Msa1087200 | 0.808066 | 3.717668e-50 | -8.615850e-47 |
Msa0508160 | Msa1087200 | 0.803811 | 2.917610e-49 | -8.615850e-47 |
Msa0510050 | Msa1087200 | 0.833620 | 4.802961e-56 | -8.615850e-47 |
Msa0531030 | Msa1087200 | 0.801160 | 1.026256e-48 | -8.615850e-47 |
Msa0531040 | Msa1087200 | 0.842128 | 3.124316e-58 | -8.615850e-47 |
Msa0531050 | Msa1087200 | 0.808954 | 2.402519e-50 | -8.615850e-47 |
Msa0531080 | Msa1087200 | 0.818250 | 2.162596e-52 | -8.615850e-47 |
Msa0538650 | Msa1087200 | 0.827411 | 1.588238e-54 | -8.615850e-47 |
Msa0540640 | Msa1087200 | 0.811708 | 6.116561e-51 | -8.615850e-47 |
Msa0547370 | Msa1087200 | 0.813785 | 2.147367e-51 | -8.615850e-47 |
Msa0554660 | Msa1087200 | 0.807236 | 5.577858e-50 | -8.615850e-47 |
Msa0561830 | Msa1087200 | 0.806309 | 8.759198e-50 | -8.615850e-47 |
Msa0566490 | Msa1087200 | 0.838063 | 3.592121e-57 | -8.615850e-47 |
Msa0567570 | Msa1087200 | 0.811275 | 7.595897e-51 | -8.615850e-47 |
Msa0568920 | Msa1087200 | 0.818542 | 1.856151e-52 | -8.615850e-47 |
Msa0587920 | Msa1087200 | 0.805638 | 1.212217e-49 | -8.615850e-47 |
Msa0587930 | Msa1087200 | 0.852615 | 4.109198e-61 | -8.615850e-47 |
Msa0588040 | Msa1087200 | 0.836084 | 1.151141e-56 | -8.615850e-47 |
Msa0594470 | Msa1087200 | 0.865735 | 4.758976e-65 | -8.615850e-47 |
Msa0597800 | Msa1087200 | 0.812879 | 3.395735e-51 | -8.615850e-47 |
Msa0597820 | Msa1087200 | 0.810040 | 1.404248e-50 | -8.615850e-47 |
Msa0602100 | Msa1087200 | 0.813998 | 1.927077e-51 | -8.615850e-47 |
Msa0847140 | Msa1087200 | 0.816245 | 6.106956e-52 | -8.615850e-47 |
Msa0850640 | Msa1087200 | 0.803410 | 3.532267e-49 | -8.615850e-47 |
Msa0853080 | Msa1087200 | 0.811980 | 5.335389e-51 | -8.615850e-47 |
Msa0854380 | Msa1087200 | 0.846658 | 1.891586e-59 | -8.615850e-47 |
Msa0855260 | Msa1087200 | 0.807800 | 4.235408e-50 | -8.615850e-47 |
Msa0859230 | Msa1087200 | 0.819273 | 1.266746e-52 | -8.615850e-47 |
Msa0876030 | Msa1087200 | -0.808384 | 3.179567e-50 | -8.615850e-47 |
Msa0890210 | Msa1087200 | 0.829436 | 5.154688e-55 | -8.615850e-47 |
Msa0896920 | Msa1087200 | 0.848585 | 5.579080e-60 | -8.615850e-47 |
Msa0896950 | Msa1087200 | 0.807257 | 5.520523e-50 | -8.615850e-47 |
Msa0902340 | Msa1087200 | 0.804872 | 1.753365e-49 | -8.615850e-47 |
Msa0910560 | Msa1087200 | 0.802991 | 4.313048e-49 | -8.615850e-47 |
Msa0910590 | Msa1087200 | 0.817571 | 3.077297e-52 | -8.615850e-47 |
Msa0948430 | Msa1087200 | 0.808011 | 3.818385e-50 | -8.615850e-47 |
Msa0950090 | Msa1087200 | 0.817810 | 2.719006e-52 | -8.615850e-47 |
Msa0951060 | Msa1087200 | 0.802452 | 5.572098e-49 | -8.615850e-47 |
Msa0964510 | Msa1087200 | 0.812666 | 3.780217e-51 | -8.615850e-47 |
Msa0974410 | Msa1087200 | -0.815366 | 9.590800e-52 | -8.615850e-47 |
Msa0975950 | Msa1087200 | 0.813185 | 2.909436e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1087200 | MtrunA17_Chr5g0394991 | 87.736 | 212 | 6 | 1 | 1 | 192 | 1 | 212 | 1.70e-125 | 352 |
Msa1087200 | MtrunA17_Chr1g0205171 | 49.541 | 218 | 83 | 4 | 1 | 192 | 1 | 217 | 2.02e-58 | 182 |
Msa1087200 | MtrunA17_Chr1g0185311 | 46.809 | 141 | 68 | 7 | 1 | 137 | 1 | 138 | 2.58e-30 | 109 |
Msa1087200 | MtrunA17_Chr7g0260071 | 40.876 | 137 | 77 | 3 | 8 | 142 | 7 | 141 | 1.21e-16 | 74.7 |
Msa1087200 | MtrunA17_Chr5g0395001 | 34.959 | 123 | 69 | 6 | 1 | 121 | 1 | 114 | 5.39e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1087200 | AT3G22620.1 | 42.574 | 202 | 94 | 6 | 10 | 192 | 5 | 203 | 3.24e-35 | 123 |
Msa1087200 | AT1G05450.2 | 44.751 | 181 | 74 | 5 | 26 | 188 | 27 | 199 | 1.37e-34 | 121 |
Msa1087200 | AT2G48140.2 | 54.310 | 116 | 47 | 3 | 12 | 124 | 7 | 119 | 2.63e-34 | 118 |
Msa1087200 | AT2G48140.1 | 41.294 | 201 | 88 | 7 | 12 | 190 | 7 | 199 | 6.11e-34 | 119 |
Msa1087200 | AT3G22600.1 | 34.815 | 135 | 69 | 6 | 1 | 125 | 1 | 126 | 2.60e-12 | 62.8 |
Msa1087200 | AT2G48130.2 | 32.124 | 193 | 101 | 10 | 4 | 184 | 3 | 177 | 3.87e-12 | 62.4 |
Msa1087200 | AT2G48130.6 | 32.124 | 193 | 101 | 10 | 4 | 184 | 3 | 177 | 3.87e-12 | 62.4 |
Msa1087200 | AT2G48130.4 | 32.124 | 193 | 101 | 10 | 4 | 184 | 3 | 177 | 3.87e-12 | 62.4 |
Msa1087200 | AT2G48130.5 | 32.124 | 193 | 101 | 10 | 4 | 184 | 3 | 177 | 3.87e-12 | 62.4 |
Msa1087200 | AT2G48130.1 | 32.124 | 193 | 101 | 10 | 4 | 184 | 3 | 177 | 3.87e-12 | 62.4 |
Msa1087200 | AT2G48130.3 | 32.124 | 193 | 101 | 10 | 4 | 184 | 3 | 177 | 3.87e-12 | 62.4 |
Find 74 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATTGTTTGGACCCATAT+TGG | 0.216171 | 7_2:-87810113 | Msa1087200:three_prime_UTR |
AAACCAATACCACCCCAATA+TGG | 0.274848 | 7_2:+87810099 | None:intergenic |
GACCCATATTGGGGTGGTAT+TGG | 0.297176 | 7_2:-87810102 | Msa1087200:three_prime_UTR |
AAATTGTTTGGACCCATATT+GGG | 0.299454 | 7_2:-87810112 | Msa1087200:three_prime_UTR |
CACAACAATACAAATGTCTT+TGG | 0.304309 | 7_2:+87810073 | None:intergenic |
CAGATCAGAGCGGCCACTTC+CGG | 0.318856 | 7_2:+87810312 | None:intergenic |
TAGTCTCCTACTATCTGTTT+TGG | 0.329233 | 7_2:-87810260 | Msa1087200:CDS |
TTAAAACACTACTAGGTTAC+TGG | 0.335706 | 7_2:-87810220 | Msa1087200:exon |
ATGTTTATGTTATAGAGTTT+TGG | 0.356717 | 7_2:+87811344 | None:intergenic |
CTCTATAACATAAACATAGA+TGG | 0.357921 | 7_2:-87811338 | Msa1087200:exon |
AATATGTTTGGCTATATTGC+AGG | 0.361101 | 7_2:-87810148 | Msa1087200:three_prime_UTR |
GGCGTTGCAGATGGAATATC+AGG | 0.363139 | 7_2:+87810334 | None:intergenic |
ATAGGTAGTTGCAATATGTT+TGG | 0.375312 | 7_2:-87810160 | Msa1087200:three_prime_UTR |
GGGTTCGCTGATGGAGATAA+TGG | 0.387464 | 7_2:+87810355 | None:intergenic |
ATAGCTAAGGTTCTATTGAT+TGG | 0.389392 | 7_2:+87811052 | None:intergenic |
TTCTATATTAAAACACTACT+AGG | 0.400865 | 7_2:-87810227 | Msa1087200:exon |
GGCTCACCGCTTCCTGCTCC+AGG | 0.422121 | 7_2:-87810854 | Msa1087200:intron |
GATCTGACTCCATCATCTGC+TGG | 0.433930 | 7_2:-87810295 | Msa1087200:CDS |
GAAACTCAAGCAAGGGCTAA+TGG | 0.441100 | 7_2:+87811201 | None:intergenic |
CCTCGTGCTTGTAACTTGCC+TGG | 0.444455 | 7_2:-87811022 | Msa1087200:CDS |
AACCAATACCACCCCAATAT+GGG | 0.447031 | 7_2:+87810100 | None:intergenic |
CCACTTCCGGGCGTTGCAGA+TGG | 0.451493 | 7_2:+87810325 | None:intergenic |
CTATTGATTGGTAATGCAAA+AGG | 0.452479 | 7_2:+87811064 | None:intergenic |
GTTAGCCGTGGCTTCGATCA+TGG | 0.462490 | 7_2:-87811281 | Msa1087200:CDS |
TGATACATTAAAATCAATAG+AGG | 0.466281 | 7_2:+87810188 | None:intergenic |
CTTACCATTGATATGTTACA+TGG | 0.470781 | 7_2:+87811229 | None:intergenic |
CAATGACCAAAACAGATAGT+AGG | 0.505531 | 7_2:+87810254 | None:intergenic |
GATAATGGATTGGTTGTCTC+AGG | 0.511804 | 7_2:+87810370 | None:intergenic |
TTTGTTGTGTTTAAGAGTGA+AGG | 0.513809 | 7_2:+87811390 | None:intergenic |
ATCCTTGCTTCCACTTGTGA+GGG | 0.516520 | 7_2:+87811117 | None:intergenic |
CCATCTGCAACGCCCGGAAG+TGG | 0.516819 | 7_2:-87810325 | Msa1087200:CDS |
GATGATGATCCAGCAGATGA+TGG | 0.519019 | 7_2:+87810286 | None:intergenic |
AATCCTTGCTTCCACTTGTG+AGG | 0.527769 | 7_2:+87811116 | None:intergenic |
GGAATATCAGGGTTCGCTGA+TGG | 0.537454 | 7_2:+87810346 | None:intergenic |
AGAGAAGGTGTCACTGGTGA+GGG | 0.537488 | 7_2:+87810403 | None:intergenic |
CCACGGCTAACACCACAGTT+AGG | 0.542248 | 7_2:+87811293 | None:intergenic |
CGCTGATGGAGATAATGGAT+TGG | 0.542515 | 7_2:+87810360 | None:intergenic |
GATATTCCATCTGCAACGCC+CGG | 0.544541 | 7_2:-87810331 | Msa1087200:CDS |
CTCACAAATAGTAGTGGCAA+TGG | 0.545441 | 7_2:-87811178 | Msa1087200:CDS |
CGTCGCGGTTTACCTGGAGC+AGG | 0.545706 | 7_2:+87810842 | None:intergenic |
GACCCTCACAAGTGGAAGCA+AGG | 0.549047 | 7_2:-87811119 | Msa1087200:CDS |
CATTGCCACTACTATTTGTG+AGG | 0.549899 | 7_2:+87811179 | None:intergenic |
GTCGTGATTTGAGCGTAGGC+TGG | 0.551456 | 7_2:+87811253 | None:intergenic |
GTTTGGCTATATTGCAGGGA+GGG | 0.557553 | 7_2:-87810143 | Msa1087200:three_prime_UTR |
TGTATGTGTCTTATTGCCAC+TGG | 0.565408 | 7_2:-87811094 | Msa1087200:CDS |
GGATTGGTTGTCTCAGGCTG+TGG | 0.565431 | 7_2:+87810376 | None:intergenic |
GGTTTACCTGGAGCAGGAAG+CGG | 0.566105 | 7_2:+87810848 | None:intergenic |
GACGCCATGTAACATATCAA+TGG | 0.568392 | 7_2:-87811233 | Msa1087200:CDS |
AATTGTTTGGACCCATATTG+GGG | 0.569765 | 7_2:-87810111 | Msa1087200:three_prime_UTR |
TTGCATTGAAGTGGAACACC+AGG | 0.570114 | 7_2:+87811004 | None:intergenic |
GCAGCAATCAGCAGTGGGTG+AGG | 0.573593 | 7_2:+87811153 | None:intergenic |
TGGCGTCGTGATTTGAGCGT+AGG | 0.576088 | 7_2:+87811249 | None:intergenic |
GCAATCAAGACCCTCACAAG+TGG | 0.578959 | 7_2:-87811127 | Msa1087200:CDS |
CAGAGAAGGTGTCACTGGTG+AGG | 0.580166 | 7_2:+87810402 | None:intergenic |
GTATTGTTGTGTATTATGTG+TGG | 0.581727 | 7_2:-87810061 | Msa1087200:three_prime_UTR |
ATATGTTTGGCTATATTGCA+GGG | 0.593280 | 7_2:-87810147 | Msa1087200:three_prime_UTR |
AGTTTCCTCACAAATAGTAG+TGG | 0.606601 | 7_2:-87811184 | Msa1087200:CDS |
TGCAGCCATGATCGAAGCCA+CGG | 0.611380 | 7_2:+87811276 | None:intergenic |
CCTAACTGTGGTGTTAGCCG+TGG | 0.613375 | 7_2:-87811293 | Msa1087200:CDS |
GGTGACAGAGAAGGTGTCAC+TGG | 0.619445 | 7_2:+87810397 | None:intergenic |
TGTTTGGACCCATATTGGGG+TGG | 0.623606 | 7_2:-87810108 | Msa1087200:three_prime_UTR |
TTGTGAGGAAACTCAAGCAA+GGG | 0.634401 | 7_2:+87811194 | None:intergenic |
ACGAGGAAGAGAGATAGCTA+AGG | 0.635982 | 7_2:+87811039 | None:intergenic |
GCATTGCAGCAATCAGCAGT+GGG | 0.640694 | 7_2:+87811148 | None:intergenic |
TTTGTGAGGAAACTCAAGCA+AGG | 0.643831 | 7_2:+87811193 | None:intergenic |
GTCTCTCTACCGCCTAACTG+TGG | 0.648382 | 7_2:-87811305 | Msa1087200:CDS |
TCAGGCTGTGGTGACAGAGA+AGG | 0.649180 | 7_2:+87810388 | None:intergenic |
TGCATTGCAGCAATCAGCAG+TGG | 0.654060 | 7_2:+87811147 | None:intergenic |
GCGTTGCAGATGGAATATCA+GGG | 0.683696 | 7_2:+87810335 | None:intergenic |
CCAGGCAAGTTACAAGCACG+AGG | 0.683819 | 7_2:+87811022 | None:intergenic |
TGCAAAAGGAACATTGCCAG+TGG | 0.683851 | 7_2:+87811078 | None:intergenic |
CGGCTAACACCACAGTTAGG+CGG | 0.689758 | 7_2:+87811296 | None:intergenic |
TGTTTGGCTATATTGCAGGG+AGG | 0.699618 | 7_2:-87810144 | Msa1087200:three_prime_UTR |
ATGATGGAGTCAGATCAGAG+CGG | 0.809779 | 7_2:+87810302 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GAAAAATAATAGTAATTTTT+AGG | + | chr7_2:87810644-87810663 | None:intergenic | 10.0% |
!!! | TTTTAATGTATCAAATTAAT+AGG | - | chr7_2:87811267-87811286 | Msa1087200:CDS | 10.0% |
!!! | GAAAAATAATAGTAATTTTT+AGG | + | chr7_2:87810644-87810663 | None:intergenic | 10.0% |
!!! | TTTTAATGTATCAAATTAAT+AGG | - | chr7_2:87811267-87811286 | Msa1087200:CDS | 10.0% |
!! | AAAATAAAGAATGAAGATTT+AGG | + | chr7_2:87810478-87810497 | None:intergenic | 15.0% |
!!! | ATAAATATGGTTTTAAATTG+CGG | + | chr7_2:87810942-87810961 | None:intergenic | 15.0% |
!! | AAAATAAAGAATGAAGATTT+AGG | + | chr7_2:87810478-87810497 | None:intergenic | 15.0% |
!!! | ATAAATATGGTTTTAAATTG+CGG | + | chr7_2:87810942-87810961 | None:intergenic | 15.0% |
!!! | TTATAGAGTTTTGGTTTTTT+GGG | + | chr7_2:87810095-87810114 | None:intergenic | 20.0% |
!!! | ATGTTTATGTTATAGAGTTT+TGG | + | chr7_2:87810104-87810123 | None:intergenic | 20.0% |
!! | TTAGTGATCAACTATAAATA+TGG | + | chr7_2:87810955-87810974 | None:intergenic | 20.0% |
!! | TTCTATATTAAAACACTACT+AGG | - | chr7_2:87811218-87811237 | Msa1087200:CDS | 20.0% |
!! | TGATACATTAAAATCAATAG+AGG | + | chr7_2:87811260-87811279 | None:intergenic | 20.0% |
!!! | TTATAGAGTTTTGGTTTTTT+GGG | + | chr7_2:87810095-87810114 | None:intergenic | 20.0% |
!!! | ATGTTTATGTTATAGAGTTT+TGG | + | chr7_2:87810104-87810123 | None:intergenic | 20.0% |
!! | TTAGTGATCAACTATAAATA+TGG | + | chr7_2:87810955-87810974 | None:intergenic | 20.0% |
!! | TTCTATATTAAAACACTACT+AGG | - | chr7_2:87811218-87811237 | Msa1087200:CDS | 20.0% |
!! | TGATACATTAAAATCAATAG+AGG | + | chr7_2:87811260-87811279 | None:intergenic | 20.0% |
!!! | TATAGAGTTTTGGTTTTTTG+GGG | + | chr7_2:87810094-87810113 | None:intergenic | 25.0% |
!!! | GTTATAGAGTTTTGGTTTTT+TGG | + | chr7_2:87810096-87810115 | None:intergenic | 25.0% |
! | CTCTATAACATAAACATAGA+TGG | - | chr7_2:87810107-87810126 | Msa1087200:three_prime_UTR | 25.0% |
! | AGAGTAATTGACAAATAGAA+TGG | + | chr7_2:87810540-87810559 | None:intergenic | 25.0% |
!!! | TCATTTTGACTTATATTGAC+AGG | - | chr7_2:87810684-87810703 | Msa1087200:intron | 25.0% |
!!! | GTGAAAAATTGTTTTTGATG+CGG | - | chr7_2:87810842-87810861 | Msa1087200:intron | 25.0% |
!!! | TATAGAGTTTTGGTTTTTTG+GGG | + | chr7_2:87810094-87810113 | None:intergenic | 25.0% |
!!! | GTTATAGAGTTTTGGTTTTT+TGG | + | chr7_2:87810096-87810115 | None:intergenic | 25.0% |
! | CTCTATAACATAAACATAGA+TGG | - | chr7_2:87810107-87810126 | Msa1087200:three_prime_UTR | 25.0% |
! | AGAGTAATTGACAAATAGAA+TGG | + | chr7_2:87810540-87810559 | None:intergenic | 25.0% |
!!! | TCATTTTGACTTATATTGAC+AGG | - | chr7_2:87810684-87810703 | Msa1087200:intron | 25.0% |
!!! | GTGAAAAATTGTTTTTGATG+CGG | - | chr7_2:87810842-87810861 | Msa1087200:intron | 25.0% |
! | TTTGTTGTGTTTAAGAGTGA+AGG | + | chr7_2:87810058-87810077 | None:intergenic | 30.0% |
CTTACCATTGATATGTTACA+TGG | + | chr7_2:87810219-87810238 | None:intergenic | 30.0% | |
!! | CTATTGATTGGTAATGCAAA+AGG | + | chr7_2:87810384-87810403 | None:intergenic | 30.0% |
ATAGCTAAGGTTCTATTGAT+TGG | + | chr7_2:87810396-87810415 | None:intergenic | 30.0% | |
CTCAAGGTACATATTACTTA+CGG | - | chr7_2:87810760-87810779 | Msa1087200:intron | 30.0% | |
!!! | TCACCTTTTTTTCATTGAAC+AGG | - | chr7_2:87811006-87811025 | Msa1087200:CDS | 30.0% |
GAACCTGTTCAATGAAAAAA+AGG | + | chr7_2:87811012-87811031 | None:intergenic | 30.0% | |
TTAAAACACTACTAGGTTAC+TGG | - | chr7_2:87811225-87811244 | Msa1087200:CDS | 30.0% | |
ATAGGTAGTTGCAATATGTT+TGG | - | chr7_2:87811285-87811304 | Msa1087200:CDS | 30.0% | |
AATATGTTTGGCTATATTGC+AGG | - | chr7_2:87811297-87811316 | Msa1087200:CDS | 30.0% | |
ATATGTTTGGCTATATTGCA+GGG | - | chr7_2:87811298-87811317 | Msa1087200:CDS | 30.0% | |
AAATTGTTTGGACCCATATT+GGG | - | chr7_2:87811333-87811352 | Msa1087200:exon | 30.0% | |
CACAACAATACAAATGTCTT+TGG | + | chr7_2:87811375-87811394 | None:intergenic | 30.0% | |
GTATTGTTGTGTATTATGTG+TGG | - | chr7_2:87811384-87811403 | Msa1087200:five_prime_UTR | 30.0% | |
! | TTTGTTGTGTTTAAGAGTGA+AGG | + | chr7_2:87810058-87810077 | None:intergenic | 30.0% |
CTTACCATTGATATGTTACA+TGG | + | chr7_2:87810219-87810238 | None:intergenic | 30.0% | |
!! | CTATTGATTGGTAATGCAAA+AGG | + | chr7_2:87810384-87810403 | None:intergenic | 30.0% |
ATAGCTAAGGTTCTATTGAT+TGG | + | chr7_2:87810396-87810415 | None:intergenic | 30.0% | |
CTCAAGGTACATATTACTTA+CGG | - | chr7_2:87810760-87810779 | Msa1087200:intron | 30.0% | |
!!! | TCACCTTTTTTTCATTGAAC+AGG | - | chr7_2:87811006-87811025 | Msa1087200:CDS | 30.0% |
GAACCTGTTCAATGAAAAAA+AGG | + | chr7_2:87811012-87811031 | None:intergenic | 30.0% | |
TTAAAACACTACTAGGTTAC+TGG | - | chr7_2:87811225-87811244 | Msa1087200:CDS | 30.0% | |
ATAGGTAGTTGCAATATGTT+TGG | - | chr7_2:87811285-87811304 | Msa1087200:CDS | 30.0% | |
AATATGTTTGGCTATATTGC+AGG | - | chr7_2:87811297-87811316 | Msa1087200:CDS | 30.0% | |
ATATGTTTGGCTATATTGCA+GGG | - | chr7_2:87811298-87811317 | Msa1087200:CDS | 30.0% | |
AAATTGTTTGGACCCATATT+GGG | - | chr7_2:87811333-87811352 | Msa1087200:exon | 30.0% | |
CACAACAATACAAATGTCTT+TGG | + | chr7_2:87811375-87811394 | None:intergenic | 30.0% | |
GTATTGTTGTGTATTATGTG+TGG | - | chr7_2:87811384-87811403 | Msa1087200:five_prime_UTR | 30.0% | |
AGTTTCCTCACAAATAGTAG+TGG | - | chr7_2:87810261-87810280 | Msa1087200:CDS | 35.0% | |
!! | AGAGTACTTTTGCATTGAAG+TGG | + | chr7_2:87810453-87810472 | None:intergenic | 35.0% |
TTGACTTATATTGACAGGAC+CGG | - | chr7_2:87810689-87810708 | Msa1087200:intron | 35.0% | |
CGTAAGTAATATGTACCTTG+AGG | + | chr7_2:87810762-87810781 | None:intergenic | 35.0% | |
GTACATATTACTTACGGTCA+AGG | - | chr7_2:87810766-87810785 | Msa1087200:intron | 35.0% | |
CTTCTGTAACCTTTACATTG+TGG | - | chr7_2:87810897-87810916 | Msa1087200:intron | 35.0% | |
! | TAGTCTCCTACTATCTGTTT+TGG | - | chr7_2:87811185-87811204 | Msa1087200:CDS | 35.0% |
CAATGACCAAAACAGATAGT+AGG | + | chr7_2:87811194-87811213 | None:intergenic | 35.0% | |
!!! | CTACTATCTGTTTTGGTCAT+TGG | - | chr7_2:87811192-87811211 | Msa1087200:CDS | 35.0% |
! | AGGGTTTTGCTCAAATTGTT+TGG | - | chr7_2:87811321-87811340 | Msa1087200:CDS | 35.0% |
CAAATTGTTTGGACCCATAT+TGG | - | chr7_2:87811332-87811351 | Msa1087200:exon | 35.0% | |
AATTGTTTGGACCCATATTG+GGG | - | chr7_2:87811334-87811353 | Msa1087200:exon | 35.0% | |
AGTTTCCTCACAAATAGTAG+TGG | - | chr7_2:87810261-87810280 | Msa1087200:CDS | 35.0% | |
!! | AGAGTACTTTTGCATTGAAG+TGG | + | chr7_2:87810453-87810472 | None:intergenic | 35.0% |
TTGACTTATATTGACAGGAC+CGG | - | chr7_2:87810689-87810708 | Msa1087200:intron | 35.0% | |
CGTAAGTAATATGTACCTTG+AGG | + | chr7_2:87810762-87810781 | None:intergenic | 35.0% | |
GTACATATTACTTACGGTCA+AGG | - | chr7_2:87810766-87810785 | Msa1087200:intron | 35.0% | |
CTTCTGTAACCTTTACATTG+TGG | - | chr7_2:87810897-87810916 | Msa1087200:intron | 35.0% | |
! | TAGTCTCCTACTATCTGTTT+TGG | - | chr7_2:87811185-87811204 | Msa1087200:CDS | 35.0% |
CAATGACCAAAACAGATAGT+AGG | + | chr7_2:87811194-87811213 | None:intergenic | 35.0% | |
!!! | CTACTATCTGTTTTGGTCAT+TGG | - | chr7_2:87811192-87811211 | Msa1087200:CDS | 35.0% |
! | AGGGTTTTGCTCAAATTGTT+TGG | - | chr7_2:87811321-87811340 | Msa1087200:CDS | 35.0% |
CAAATTGTTTGGACCCATAT+TGG | - | chr7_2:87811332-87811351 | Msa1087200:exon | 35.0% | |
AATTGTTTGGACCCATATTG+GGG | - | chr7_2:87811334-87811353 | Msa1087200:exon | 35.0% | |
GACGCCATGTAACATATCAA+TGG | - | chr7_2:87810212-87810231 | Msa1087200:exon | 40.0% | |
TTGTGAGGAAACTCAAGCAA+GGG | + | chr7_2:87810254-87810273 | None:intergenic | 40.0% | |
TTTGTGAGGAAACTCAAGCA+AGG | + | chr7_2:87810255-87810274 | None:intergenic | 40.0% | |
CATTGCCACTACTATTTGTG+AGG | + | chr7_2:87810269-87810288 | None:intergenic | 40.0% | |
CTCACAAATAGTAGTGGCAA+TGG | - | chr7_2:87810267-87810286 | Msa1087200:CDS | 40.0% | |
! | TGTATGTGTCTTATTGCCAC+TGG | - | chr7_2:87810351-87810370 | Msa1087200:CDS | 40.0% |
!! | TTTGTTGTTCTCTGCAGCTT+CGG | - | chr7_2:87810569-87810588 | Msa1087200:intron | 40.0% |
! | TAAGAGATGGTGTCAATGCA+GGG | + | chr7_2:87810737-87810756 | None:intergenic | 40.0% |
! | AAGGTTCTAACTTGTAGTCG+CGG | - | chr7_2:87810785-87810804 | Msa1087200:intron | 40.0% |
!! | GATAATGGATTGGTTGTCTC+AGG | + | chr7_2:87811078-87811097 | None:intergenic | 40.0% |
AACCAATACCACCCCAATAT+GGG | + | chr7_2:87811348-87811367 | None:intergenic | 40.0% | |
AAACCAATACCACCCCAATA+TGG | + | chr7_2:87811349-87811368 | None:intergenic | 40.0% | |
GACGCCATGTAACATATCAA+TGG | - | chr7_2:87810212-87810231 | Msa1087200:exon | 40.0% | |
TTGTGAGGAAACTCAAGCAA+GGG | + | chr7_2:87810254-87810273 | None:intergenic | 40.0% | |
TTTGTGAGGAAACTCAAGCA+AGG | + | chr7_2:87810255-87810274 | None:intergenic | 40.0% | |
CATTGCCACTACTATTTGTG+AGG | + | chr7_2:87810269-87810288 | None:intergenic | 40.0% | |
CTCACAAATAGTAGTGGCAA+TGG | - | chr7_2:87810267-87810286 | Msa1087200:CDS | 40.0% | |
! | TGTATGTGTCTTATTGCCAC+TGG | - | chr7_2:87810351-87810370 | Msa1087200:CDS | 40.0% |
!! | TTTGTTGTTCTCTGCAGCTT+CGG | - | chr7_2:87810569-87810588 | Msa1087200:intron | 40.0% |
! | TAAGAGATGGTGTCAATGCA+GGG | + | chr7_2:87810737-87810756 | None:intergenic | 40.0% |
! | AAGGTTCTAACTTGTAGTCG+CGG | - | chr7_2:87810785-87810804 | Msa1087200:intron | 40.0% |
!! | GATAATGGATTGGTTGTCTC+AGG | + | chr7_2:87811078-87811097 | None:intergenic | 40.0% |
AACCAATACCACCCCAATAT+GGG | + | chr7_2:87811348-87811367 | None:intergenic | 40.0% | |
AAACCAATACCACCCCAATA+TGG | + | chr7_2:87811349-87811368 | None:intergenic | 40.0% | |
GAAACTCAAGCAAGGGCTAA+TGG | + | chr7_2:87810247-87810266 | None:intergenic | 45.0% | |
ATCCTTGCTTCCACTTGTGA+GGG | + | chr7_2:87810331-87810350 | None:intergenic | 45.0% | |
AATCCTTGCTTCCACTTGTG+AGG | + | chr7_2:87810332-87810351 | None:intergenic | 45.0% | |
TGCAAAAGGAACATTGCCAG+TGG | + | chr7_2:87810370-87810389 | None:intergenic | 45.0% | |
ACGAGGAAGAGAGATAGCTA+AGG | + | chr7_2:87810409-87810428 | None:intergenic | 45.0% | |
TTGCATTGAAGTGGAACACC+AGG | + | chr7_2:87810444-87810463 | None:intergenic | 45.0% | |
! | TTGTTGTTCTCTGCAGCTTC+GGG | - | chr7_2:87810570-87810589 | Msa1087200:intron | 45.0% |
!! | CATAATAGAGTGTTGCGTCG+CGG | + | chr7_2:87810621-87810640 | None:intergenic | 45.0% |
! | AAGAGATGGTGTCAATGCAG+GGG | + | chr7_2:87810736-87810755 | None:intergenic | 45.0% |
! | CTAAGAGATGGTGTCAATGC+AGG | + | chr7_2:87810738-87810757 | None:intergenic | 45.0% |
ACACCATCTCTTAGTCCTCA+AGG | - | chr7_2:87810744-87810763 | Msa1087200:intron | 45.0% | |
GTACCTTGAGGACTAAGAGA+TGG | + | chr7_2:87810750-87810769 | None:intergenic | 45.0% | |
! | TTTTGATGCGGCCACAATTG+TGG | - | chr7_2:87810854-87810873 | Msa1087200:intron | 45.0% |
!! | CGCTGATGGAGATAATGGAT+TGG | + | chr7_2:87811088-87811107 | None:intergenic | 45.0% |
GCGTTGCAGATGGAATATCA+GGG | + | chr7_2:87811113-87811132 | None:intergenic | 45.0% | |
! | ATGATGGAGTCAGATCAGAG+CGG | + | chr7_2:87811146-87811165 | None:intergenic | 45.0% |
GATGATGATCCAGCAGATGA+TGG | + | chr7_2:87811162-87811181 | None:intergenic | 45.0% | |
TGTTTGGCTATATTGCAGGG+AGG | - | chr7_2:87811301-87811320 | Msa1087200:CDS | 45.0% | |
GTTTGGCTATATTGCAGGGA+GGG | - | chr7_2:87811302-87811321 | Msa1087200:CDS | 45.0% | |
GAAACTCAAGCAAGGGCTAA+TGG | + | chr7_2:87810247-87810266 | None:intergenic | 45.0% | |
ATCCTTGCTTCCACTTGTGA+GGG | + | chr7_2:87810331-87810350 | None:intergenic | 45.0% | |
AATCCTTGCTTCCACTTGTG+AGG | + | chr7_2:87810332-87810351 | None:intergenic | 45.0% | |
TGCAAAAGGAACATTGCCAG+TGG | + | chr7_2:87810370-87810389 | None:intergenic | 45.0% | |
ACGAGGAAGAGAGATAGCTA+AGG | + | chr7_2:87810409-87810428 | None:intergenic | 45.0% | |
TTGCATTGAAGTGGAACACC+AGG | + | chr7_2:87810444-87810463 | None:intergenic | 45.0% | |
! | TTGTTGTTCTCTGCAGCTTC+GGG | - | chr7_2:87810570-87810589 | Msa1087200:intron | 45.0% |
!! | CATAATAGAGTGTTGCGTCG+CGG | + | chr7_2:87810621-87810640 | None:intergenic | 45.0% |
! | AAGAGATGGTGTCAATGCAG+GGG | + | chr7_2:87810736-87810755 | None:intergenic | 45.0% |
! | CTAAGAGATGGTGTCAATGC+AGG | + | chr7_2:87810738-87810757 | None:intergenic | 45.0% |
ACACCATCTCTTAGTCCTCA+AGG | - | chr7_2:87810744-87810763 | Msa1087200:intron | 45.0% | |
GTACCTTGAGGACTAAGAGA+TGG | + | chr7_2:87810750-87810769 | None:intergenic | 45.0% | |
! | TTTTGATGCGGCCACAATTG+TGG | - | chr7_2:87810854-87810873 | Msa1087200:intron | 45.0% |
!! | CGCTGATGGAGATAATGGAT+TGG | + | chr7_2:87811088-87811107 | None:intergenic | 45.0% |
GCGTTGCAGATGGAATATCA+GGG | + | chr7_2:87811113-87811132 | None:intergenic | 45.0% | |
! | ATGATGGAGTCAGATCAGAG+CGG | + | chr7_2:87811146-87811165 | None:intergenic | 45.0% |
GATGATGATCCAGCAGATGA+TGG | + | chr7_2:87811162-87811181 | None:intergenic | 45.0% | |
TGTTTGGCTATATTGCAGGG+AGG | - | chr7_2:87811301-87811320 | Msa1087200:CDS | 45.0% | |
GTTTGGCTATATTGCAGGGA+GGG | - | chr7_2:87811302-87811321 | Msa1087200:CDS | 45.0% | |
GCATTGCAGCAATCAGCAGT+GGG | + | chr7_2:87810300-87810319 | None:intergenic | 50.0% | |
TGCATTGCAGCAATCAGCAG+TGG | + | chr7_2:87810301-87810320 | None:intergenic | 50.0% | |
GCAATCAAGACCCTCACAAG+TGG | - | chr7_2:87810318-87810337 | Msa1087200:CDS | 50.0% | |
GTCAATGCAGGGGAAAGAGA+TGG | + | chr7_2:87810726-87810745 | None:intergenic | 50.0% | |
CTAGAGCTCGACCACAATTG+TGG | + | chr7_2:87810868-87810887 | None:intergenic | 50.0% | |
CTACTGCGGCCACAATGTAA+AGG | + | chr7_2:87810909-87810928 | None:intergenic | 50.0% | |
!! | AGAGAAGGTGTCACTGGTGA+GGG | + | chr7_2:87811045-87811064 | None:intergenic | 50.0% |
GGGTTCGCTGATGGAGATAA+TGG | + | chr7_2:87811093-87811112 | None:intergenic | 50.0% | |
GGAATATCAGGGTTCGCTGA+TGG | + | chr7_2:87811102-87811121 | None:intergenic | 50.0% | |
GGCGTTGCAGATGGAATATC+AGG | + | chr7_2:87811114-87811133 | None:intergenic | 50.0% | |
GATATTCCATCTGCAACGCC+CGG | - | chr7_2:87811114-87811133 | Msa1087200:CDS | 50.0% | |
GATCTGACTCCATCATCTGC+TGG | - | chr7_2:87811150-87811169 | Msa1087200:CDS | 50.0% | |
TGTTTGGACCCATATTGGGG+TGG | - | chr7_2:87811337-87811356 | Msa1087200:exon | 50.0% | |
GACCCATATTGGGGTGGTAT+TGG | - | chr7_2:87811343-87811362 | Msa1087200:five_prime_UTR | 50.0% | |
GCATTGCAGCAATCAGCAGT+GGG | + | chr7_2:87810300-87810319 | None:intergenic | 50.0% | |
TGCATTGCAGCAATCAGCAG+TGG | + | chr7_2:87810301-87810320 | None:intergenic | 50.0% | |
GCAATCAAGACCCTCACAAG+TGG | - | chr7_2:87810318-87810337 | Msa1087200:CDS | 50.0% | |
GTCAATGCAGGGGAAAGAGA+TGG | + | chr7_2:87810726-87810745 | None:intergenic | 50.0% | |
CTAGAGCTCGACCACAATTG+TGG | + | chr7_2:87810868-87810887 | None:intergenic | 50.0% | |
CTACTGCGGCCACAATGTAA+AGG | + | chr7_2:87810909-87810928 | None:intergenic | 50.0% | |
!! | AGAGAAGGTGTCACTGGTGA+GGG | + | chr7_2:87811045-87811064 | None:intergenic | 50.0% |
GGGTTCGCTGATGGAGATAA+TGG | + | chr7_2:87811093-87811112 | None:intergenic | 50.0% | |
GGAATATCAGGGTTCGCTGA+TGG | + | chr7_2:87811102-87811121 | None:intergenic | 50.0% | |
GGCGTTGCAGATGGAATATC+AGG | + | chr7_2:87811114-87811133 | None:intergenic | 50.0% | |
GATATTCCATCTGCAACGCC+CGG | - | chr7_2:87811114-87811133 | Msa1087200:CDS | 50.0% | |
GATCTGACTCCATCATCTGC+TGG | - | chr7_2:87811150-87811169 | Msa1087200:CDS | 50.0% | |
TGTTTGGACCCATATTGGGG+TGG | - | chr7_2:87811337-87811356 | Msa1087200:exon | 50.0% | |
GACCCATATTGGGGTGGTAT+TGG | - | chr7_2:87811343-87811362 | Msa1087200:five_prime_UTR | 50.0% | |
GTCTCTCTACCGCCTAACTG+TGG | - | chr7_2:87810140-87810159 | Msa1087200:three_prime_UTR | 55.0% | |
CGGCTAACACCACAGTTAGG+CGG | + | chr7_2:87810152-87810171 | None:intergenic | 55.0% | |
CCACGGCTAACACCACAGTT+AGG | + | chr7_2:87810155-87810174 | None:intergenic | 55.0% | |
! | CCTAACTGTGGTGTTAGCCG+TGG | - | chr7_2:87810152-87810171 | Msa1087200:three_prime_UTR | 55.0% |
GTTAGCCGTGGCTTCGATCA+TGG | - | chr7_2:87810164-87810183 | Msa1087200:three_prime_UTR | 55.0% | |
TGCAGCCATGATCGAAGCCA+CGG | + | chr7_2:87810172-87810191 | None:intergenic | 55.0% | |
GTCGTGATTTGAGCGTAGGC+TGG | + | chr7_2:87810195-87810214 | None:intergenic | 55.0% | |
TGGCGTCGTGATTTGAGCGT+AGG | + | chr7_2:87810199-87810218 | None:intergenic | 55.0% | |
GACCCTCACAAGTGGAAGCA+AGG | - | chr7_2:87810326-87810345 | Msa1087200:CDS | 55.0% | |
CCAGGCAAGTTACAAGCACG+AGG | + | chr7_2:87810426-87810445 | None:intergenic | 55.0% | |
! | CCTCGTGCTTGTAACTTGCC+TGG | - | chr7_2:87810423-87810442 | Msa1087200:intron | 55.0% |
GGTTTACCTGGAGCAGGAAG+CGG | + | chr7_2:87810600-87810619 | None:intergenic | 55.0% | |
TTGACAGGACCGGCGTCTTT+CGG | - | chr7_2:87810699-87810718 | Msa1087200:intron | 55.0% | |
! | CTAACTTGTAGTCGCGGTCG+TGG | - | chr7_2:87810791-87810810 | Msa1087200:intron | 55.0% |
GCGGTCAGCAACTACTACTG+CGG | + | chr7_2:87810923-87810942 | None:intergenic | 55.0% | |
!! | CAGAGAAGGTGTCACTGGTG+AGG | + | chr7_2:87811046-87811065 | None:intergenic | 55.0% |
!! | GGTGACAGAGAAGGTGTCAC+TGG | + | chr7_2:87811051-87811070 | None:intergenic | 55.0% |
TCAGGCTGTGGTGACAGAGA+AGG | + | chr7_2:87811060-87811079 | None:intergenic | 55.0% | |
!! | GGATTGGTTGTCTCAGGCTG+TGG | + | chr7_2:87811072-87811091 | None:intergenic | 55.0% |
GTCTCTCTACCGCCTAACTG+TGG | - | chr7_2:87810140-87810159 | Msa1087200:three_prime_UTR | 55.0% | |
CGGCTAACACCACAGTTAGG+CGG | + | chr7_2:87810152-87810171 | None:intergenic | 55.0% | |
CCACGGCTAACACCACAGTT+AGG | + | chr7_2:87810155-87810174 | None:intergenic | 55.0% | |
! | CCTAACTGTGGTGTTAGCCG+TGG | - | chr7_2:87810152-87810171 | Msa1087200:three_prime_UTR | 55.0% |
GTTAGCCGTGGCTTCGATCA+TGG | - | chr7_2:87810164-87810183 | Msa1087200:three_prime_UTR | 55.0% | |
TGCAGCCATGATCGAAGCCA+CGG | + | chr7_2:87810172-87810191 | None:intergenic | 55.0% | |
GTCGTGATTTGAGCGTAGGC+TGG | + | chr7_2:87810195-87810214 | None:intergenic | 55.0% | |
TGGCGTCGTGATTTGAGCGT+AGG | + | chr7_2:87810199-87810218 | None:intergenic | 55.0% | |
GACCCTCACAAGTGGAAGCA+AGG | - | chr7_2:87810326-87810345 | Msa1087200:CDS | 55.0% | |
CCAGGCAAGTTACAAGCACG+AGG | + | chr7_2:87810426-87810445 | None:intergenic | 55.0% | |
! | CCTCGTGCTTGTAACTTGCC+TGG | - | chr7_2:87810423-87810442 | Msa1087200:intron | 55.0% |
GGTTTACCTGGAGCAGGAAG+CGG | + | chr7_2:87810600-87810619 | None:intergenic | 55.0% | |
TTGACAGGACCGGCGTCTTT+CGG | - | chr7_2:87810699-87810718 | Msa1087200:intron | 55.0% | |
! | CTAACTTGTAGTCGCGGTCG+TGG | - | chr7_2:87810791-87810810 | Msa1087200:intron | 55.0% |
GCGGTCAGCAACTACTACTG+CGG | + | chr7_2:87810923-87810942 | None:intergenic | 55.0% | |
!! | CAGAGAAGGTGTCACTGGTG+AGG | + | chr7_2:87811046-87811065 | None:intergenic | 55.0% |
!! | GGTGACAGAGAAGGTGTCAC+TGG | + | chr7_2:87811051-87811070 | None:intergenic | 55.0% |
TCAGGCTGTGGTGACAGAGA+AGG | + | chr7_2:87811060-87811079 | None:intergenic | 55.0% | |
!! | GGATTGGTTGTCTCAGGCTG+TGG | + | chr7_2:87811072-87811091 | None:intergenic | 55.0% |
GCAGCAATCAGCAGTGGGTG+AGG | + | chr7_2:87810295-87810314 | None:intergenic | 60.0% | |
GTGTTGCGTCGCGGTTTACC+TGG | + | chr7_2:87810612-87810631 | None:intergenic | 60.0% | |
TGACAGGACCGGCGTCTTTC+GGG | - | chr7_2:87810700-87810719 | Msa1087200:intron | 60.0% | |
AGAGATGGCCCGAAAGACGC+CGG | + | chr7_2:87810711-87810730 | None:intergenic | 60.0% | |
AGATCAGAGCGGCCACTTCC+GGG | + | chr7_2:87811135-87811154 | None:intergenic | 60.0% | |
CAGATCAGAGCGGCCACTTC+CGG | + | chr7_2:87811136-87811155 | None:intergenic | 60.0% | |
GCAGCAATCAGCAGTGGGTG+AGG | + | chr7_2:87810295-87810314 | None:intergenic | 60.0% | |
GTGTTGCGTCGCGGTTTACC+TGG | + | chr7_2:87810612-87810631 | None:intergenic | 60.0% | |
TGACAGGACCGGCGTCTTTC+GGG | - | chr7_2:87810700-87810719 | Msa1087200:intron | 60.0% | |
AGAGATGGCCCGAAAGACGC+CGG | + | chr7_2:87810711-87810730 | None:intergenic | 60.0% | |
AGATCAGAGCGGCCACTTCC+GGG | + | chr7_2:87811135-87811154 | None:intergenic | 60.0% | |
CAGATCAGAGCGGCCACTTC+CGG | + | chr7_2:87811136-87811155 | None:intergenic | 60.0% | |
CGTCGCGGTTTACCTGGAGC+AGG | + | chr7_2:87810606-87810625 | None:intergenic | 65.0% | |
! | CCACTTCCGGGCGTTGCAGA+TGG | + | chr7_2:87811123-87811142 | None:intergenic | 65.0% |
CCATCTGCAACGCCCGGAAG+TGG | - | chr7_2:87811120-87811139 | Msa1087200:CDS | 65.0% | |
CGTCGCGGTTTACCTGGAGC+AGG | + | chr7_2:87810606-87810625 | None:intergenic | 65.0% | |
! | CCACTTCCGGGCGTTGCAGA+TGG | + | chr7_2:87811123-87811142 | None:intergenic | 65.0% |
CCATCTGCAACGCCCGGAAG+TGG | - | chr7_2:87811120-87811139 | Msa1087200:CDS | 65.0% | |
GGCTCACCGCTTCCTGCTCC+AGG | - | chr7_2:87810591-87810610 | Msa1087200:intron | 70.0% | |
GGCTCACCGCTTCCTGCTCC+AGG | - | chr7_2:87810591-87810610 | Msa1087200:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 87810034 | 87811433 | 87810034 | ID=Msa1087200;Name=Msa1087200 |
chr7_2 | mRNA | 87810034 | 87811433 | 87810034 | ID=Msa1087200-mRNA-1;Parent=Msa1087200;Name=Msa1087200-mRNA-1;_AED=0.12;_eAED=0.12;_QI=92|0.5|1|1|1|1|3|194|192 |
chr7_2 | exon | 87810034 | 87810439 | 87810034 | ID=Msa1087200-mRNA-1:exon:24032;Parent=Msa1087200-mRNA-1 |
chr7_2 | exon | 87810855 | 87810881 | 87810855 | ID=Msa1087200-mRNA-1:exon:24031;Parent=Msa1087200-mRNA-1 |
chr7_2 | exon | 87811002 | 87811433 | 87811002 | ID=Msa1087200-mRNA-1:exon:24030;Parent=Msa1087200-mRNA-1 |
chr7_2 | five_prime_UTR | 87811342 | 87811433 | 87811342 | ID=Msa1087200-mRNA-1:five_prime_utr;Parent=Msa1087200-mRNA-1 |
chr7_2 | CDS | 87811002 | 87811341 | 87811002 | ID=Msa1087200-mRNA-1:cds;Parent=Msa1087200-mRNA-1 |
chr7_2 | CDS | 87810855 | 87810881 | 87810855 | ID=Msa1087200-mRNA-1:cds;Parent=Msa1087200-mRNA-1 |
chr7_2 | CDS | 87810228 | 87810439 | 87810228 | ID=Msa1087200-mRNA-1:cds;Parent=Msa1087200-mRNA-1 |
chr7_2 | three_prime_UTR | 87810034 | 87810227 | 87810034 | ID=Msa1087200-mRNA-1:three_prime_utr;Parent=Msa1087200-mRNA-1 |
Gene Sequence |
Protein sequence |