AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0060370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060370 MtrunA17_Chr1g0159991 90.957 376 24 1 327 692 8 383 0.0 691
Msa0060370 MtrunA17_Chr1g0159991 60.335 358 101 3 3 327 9 358 1.97e-143 424
Msa0060370 MtrunA17_Chr1g0159981 85.185 378 46 1 325 692 16 393 0.0 651
Msa0060370 MtrunA17_Chr1g0159981 62.079 356 93 4 6 327 21 368 4.46e-146 431
Msa0060370 MtrunA17_Chr1g0160011 83.155 374 50 3 327 689 11 382 0.0 622
Msa0060370 MtrunA17_Chr1g0160011 57.990 388 107 7 3 351 12 382 8.50e-140 414
Msa0060370 MtrunA17_Chr1g0159971 79.740 385 36 4 1 351 15 391 0.0 597
Msa0060370 MtrunA17_Chr1g0159971 64.416 385 121 3 323 691 9 393 5.04e-178 513
Msa0060370 MtrunA17_Chr1g0160031 78.249 377 70 2 326 692 10 384 0.0 593
Msa0060370 MtrunA17_Chr1g0160031 54.830 383 126 6 3 351 12 381 2.18e-135 403
Msa0060370 MtrunA17_Chr1g0160101 58.854 384 145 3 320 691 7 389 2.38e-154 452
Msa0060370 MtrunA17_Chr1g0160101 62.431 362 94 4 2 329 14 367 2.29e-149 439
Msa0060370 MtrunA17_Chr7g0254461 52.520 377 165 4 329 691 17 393 2.13e-136 406
Msa0060370 MtrunA17_Chr7g0254461 50.919 381 140 6 10 351 19 391 3.65e-123 372
Msa0060370 MtrunA17_Chr8g0381581 51.706 381 169 4 318 685 5 383 5.69e-134 400
Msa0060370 MtrunA17_Chr8g0381581 50.000 380 144 5 7 350 17 386 5.08e-119 361
Msa0060370 MtrunA17_Chr7g0226941 47.778 360 169 5 347 691 25 380 4.44e-106 327
Msa0060370 MtrunA17_Chr7g0226941 44.350 354 153 4 13 330 14 359 1.98e-91 289
Msa0060370 MtrunA17_Chr7g0275291 40.957 376 200 6 329 689 7 375 1.12e-90 287
Msa0060370 MtrunA17_Chr7g0275291 37.859 383 191 6 9 356 10 380 1.03e-76 251
Msa0060370 MtrunA17_Chr6g0450701 43.526 363 174 10 345 689 29 378 2.06e-88 281
Msa0060370 MtrunA17_Chr6g0450701 40.584 377 172 8 10 351 19 378 5.31e-81 262
Msa0060370 MtrunA17_Chr7g0273101 45.070 355 172 10 344 681 18 366 8.31e-88 280
Msa0060370 MtrunA17_Chr7g0273101 41.765 340 150 7 29 330 26 355 4.25e-74 244
Msa0060370 MtrunA17_Chr7g0226911 39.474 380 201 9 334 689 10 384 6.27e-85 273
Msa0060370 MtrunA17_Chr7g0226911 38.919 370 172 8 24 351 27 384 5.30e-74 244
Msa0060370 MtrunA17_Chr8g0352901 41.818 385 184 10 329 689 4 372 1.81e-84 271
Msa0060370 MtrunA17_Chr8g0352901 37.903 372 174 8 21 351 17 372 6.68e-67 224
Msa0060370 MtrunA17_Chr7g0226931 41.371 394 184 12 335 689 13 398 3.80e-84 271
Msa0060370 MtrunA17_Chr7g0226931 40.000 370 167 8 11 330 15 379 1.07e-75 249
Msa0060370 MtrunA17_Chr1g0191461 43.127 371 185 11 331 683 7 369 3.69e-83 267
Msa0060370 MtrunA17_Chr1g0191461 37.772 368 176 9 4 330 1 356 7.13e-69 229
Msa0060370 MtrunA17_Chr8g0347751 40.000 360 188 6 350 689 31 382 8.52e-83 267
Msa0060370 MtrunA17_Chr8g0347751 37.203 379 191 4 15 356 19 387 1.82e-73 242
Msa0060370 MtrunA17_Chr6g0450711 39.949 393 190 11 329 690 85 462 1.48e-81 266
Msa0060370 MtrunA17_Chr6g0450711 41.176 340 152 5 23 327 113 439 1.15e-70 237
Msa0060370 MtrunA17_Chr6g0450721 37.760 384 193 9 329 690 1 360 1.31e-78 255
Msa0060370 MtrunA17_Chr6g0450721 39.130 345 153 5 16 327 17 337 7.92e-67 224
Msa0060370 MtrunA17_Chr6g0450731 40.390 359 178 10 347 690 25 362 1.93e-78 254
Msa0060370 MtrunA17_Chr6g0450731 39.031 351 147 9 16 327 17 339 2.55e-66 223
Msa0060370 MtrunA17_Chr7g0271551 41.261 349 173 10 355 690 36 365 1.32e-75 247
Msa0060370 MtrunA17_Chr7g0271551 38.310 355 146 10 32 345 36 358 8.30e-61 208
Msa0060370 MtrunA17_Chr8g0339251 40.870 345 160 12 329 654 4 323 5.84e-65 218
Msa0060370 MtrunA17_Chr8g0339251 37.425 334 142 8 21 314 17 323 2.06e-57 197
Msa0060370 MtrunA17_Chr2g0283531 35.447 347 156 11 30 330 29 353 2.46e-49 177
Msa0060370 MtrunA17_Chr2g0283531 35.196 358 185 13 353 683 29 366 6.96e-48 173
Msa0060370 MtrunA17_Chr2g0283501 33.515 367 197 11 343 681 18 365 1.87e-45 166
Msa0060370 MtrunA17_Chr2g0283501 31.746 378 174 11 9 334 13 358 1.78e-44 163
Msa0060370 MtrunA17_Chr2g0283481 33.512 373 203 12 335 681 27 380 2.56e-45 166
Msa0060370 MtrunA17_Chr2g0283481 32.708 373 174 12 5 327 21 366 1.57e-42 159
Msa0060370 MtrunA17_Chr3g0104821 33.611 360 189 14 353 683 42 380 8.82e-44 162
Msa0060370 MtrunA17_Chr3g0104821 34.226 336 176 9 30 330 42 367 4.02e-41 154
Msa0060370 MtrunA17_Chr2g0317261 30.518 367 175 10 9 330 7 338 1.78e-42 157
Msa0060370 MtrunA17_Chr2g0317261 30.878 353 193 11 353 683 28 351 4.70e-40 150
Msa0060370 MtrunA17_Chr2g0317271 30.518 367 175 10 9 330 7 338 5.87e-42 156
Msa0060370 MtrunA17_Chr2g0317271 30.878 353 193 11 353 683 28 351 1.14e-39 149
Msa0060370 MtrunA17_Chr2g0283511 30.749 387 221 11 324 683 2 368 8.76e-42 156
Msa0060370 MtrunA17_Chr2g0283511 31.965 341 158 8 37 327 36 352 1.81e-39 150
Msa0060370 MtrunA17_Chr0c01g0489571 31.742 356 191 10 6 330 4 338 2.65e-41 154
Msa0060370 MtrunA17_Chr0c01g0489571 30.878 353 193 11 353 683 28 351 1.51e-39 149
Msa0060370 MtrunA17_Chr0c01g0489581 30.541 370 177 10 6 330 4 338 5.22e-41 153
Msa0060370 MtrunA17_Chr0c01g0489581 30.595 353 194 11 353 683 28 351 4.97e-39 147
Msa0060370 MtrunA17_Chr4g0057991 31.534 352 197 12 353 681 37 367 1.46e-38 147
Msa0060370 MtrunA17_Chr4g0057991 27.937 383 191 11 4 334 11 360 1.85e-30 124
Msa0060370 MtrunA17_Chr2g0301581 30.704 355 160 10 23 330 25 340 3.34e-38 145
Msa0060370 MtrunA17_Chr2g0301581 32.240 366 183 16 353 691 32 359 6.80e-35 136
Msa0060370 MtrunA17_Chr3g0112821 31.977 344 165 11 30 330 28 345 3.50e-38 145
Msa0060370 MtrunA17_Chr3g0112821 32.022 356 192 15 353 683 28 358 6.26e-37 142
Msa0060370 MtrunA17_Chr2g0301541 30.423 355 161 10 23 330 25 340 9.74e-38 144
Msa0060370 MtrunA17_Chr2g0301541 31.694 366 185 16 353 691 32 359 2.00e-33 132
Msa0060370 MtrunA17_Chr3g0093031 31.897 348 165 11 30 330 28 350 4.94e-37 142
Msa0060370 MtrunA17_Chr3g0093031 31.667 360 193 15 353 683 28 363 5.48e-35 136
Msa0060370 MtrunA17_Chr3g0112691 32.081 346 165 10 30 330 28 348 4.69e-36 139
Msa0060370 MtrunA17_Chr3g0112691 31.073 354 201 11 353 683 28 361 2.30e-35 137
Msa0060370 MtrunA17_Chr3g0096551 30.833 360 165 10 30 330 27 361 1.15e-34 135
Msa0060370 MtrunA17_Chr3g0096551 30.435 368 199 14 353 683 27 374 5.00e-32 128
Msa0060370 MtrunA17_Chr8g0341001 30.435 368 202 15 330 673 9 346 8.81e-34 132
Msa0060370 MtrunA17_Chr8g0341001 25.946 370 207 10 1 330 1 343 4.30e-24 104
Msa0060370 MtrunA17_Chr2g0283541 33.871 310 137 10 30 330 29 279 1.99e-33 130
Msa0060370 MtrunA17_Chr2g0283541 32.627 236 131 10 472 691 75 298 5.32e-23 100
Msa0060370 MtrunA17_Chr2g0330781 30.994 342 188 13 354 673 30 345 2.41e-33 131
Msa0060370 MtrunA17_Chr2g0330781 28.614 332 196 12 31 335 30 347 3.60e-25 107
Msa0060370 MtrunA17_Chr8g0344941 30.623 369 198 13 332 673 18 355 1.22e-31 127
Msa0060370 MtrunA17_Chr8g0344941 28.453 362 190 11 10 330 19 352 2.04e-27 114
Msa0060370 MtrunA17_Chr8g0349341 30.746 335 197 10 355 676 37 349 2.06e-31 126
Msa0060370 MtrunA17_Chr8g0349341 28.395 324 190 12 32 330 37 343 3.36e-26 110
Msa0060370 MtrunA17_Chr8g0349321 30.746 335 197 10 355 676 37 349 2.66e-31 125
Msa0060370 MtrunA17_Chr8g0349321 28.923 325 187 12 32 330 37 343 7.38e-23 100
Msa0060370 MtrunA17_Chr5g0432101 27.366 391 215 17 333 689 7 362 1.41e-30 124
Msa0060370 MtrunA17_Chr4g0027521 29.107 347 200 12 354 678 26 348 2.72e-29 119
Msa0060370 MtrunA17_Chr4g0027521 25.926 351 173 11 31 330 26 340 4.24e-21 95.5
Msa0060370 MtrunA17_Chr2g0301591 34.091 264 150 10 23 267 25 283 1.68e-28 115
Msa0060370 MtrunA17_Chr2g0301591 30.201 298 160 11 334 607 10 283 3.35e-22 97.4
Msa0060370 MtrunA17_Chr5g0396511 28.205 351 205 13 357 686 48 372 2.25e-27 114
Msa0060370 MtrunA17_Chr5g0396511 26.866 335 173 14 34 326 48 352 2.70e-17 84.3
Msa0060370 MtrunA17_Chr8g0374101 28.108 370 223 13 329 676 12 360 3.34e-27 114
Msa0060370 MtrunA17_Chr8g0374101 23.720 371 203 12 1 326 15 350 6.45e-17 83.2
Msa0060370 MtrunA17_Chr1g0156911 30.523 344 185 13 350 669 32 345 4.15e-27 113
Msa0060370 MtrunA17_Chr1g0156911 25.205 365 192 13 16 334 21 350 1.76e-18 87.8
Msa0060370 MtrunA17_Chr5g0438631 28.969 359 205 16 335 669 6 338 1.96e-26 111
Msa0060370 MtrunA17_Chr5g0438631 25.275 364 197 12 11 330 7 339 4.31e-20 92.4
Msa0060370 MtrunA17_Chr2g0320671 28.235 340 199 13 354 673 29 343 3.54e-26 110
Msa0060370 MtrunA17_Chr2g0320671 27.989 368 209 16 1 335 1 345 1.88e-19 90.5
Msa0060370 MtrunA17_Chr3g0099161 30.028 353 196 13 354 681 91 417 6.67e-26 111
Msa0060370 MtrunA17_Chr3g0099161 25.439 342 179 14 31 327 91 401 8.88e-14 73.9
Msa0060370 MtrunA17_Chr5g0444401 29.282 362 194 14 354 686 27 355 9.84e-26 109
Msa0060370 MtrunA17_Chr4g0068441 29.442 394 219 18 318 686 2 361 4.10e-25 107
Msa0060370 MtrunA17_Chr1g0156921 27.493 371 208 17 329 667 8 349 4.74e-25 107
Msa0060370 MtrunA17_Chr7g0274991 28.378 370 211 14 335 677 8 350 5.71e-25 107
Msa0060370 MtrunA17_Chr2g0301641 29.107 347 199 15 355 679 43 364 6.33e-25 107
Msa0060370 MtrunA17_Chr2g0301641 26.984 378 195 15 1 330 11 355 3.17e-22 99.8
Msa0060370 MtrunA17_Chr5g0438621 28.219 365 200 15 329 668 11 338 6.77e-25 106
Msa0060370 MtrunA17_Chr1g0156931 28.691 359 196 14 339 673 30 352 8.70e-25 106
Msa0060370 MtrunA17_Chr1g0157001 27.832 309 185 11 379 673 63 347 1.26e-24 106
Msa0060370 MtrunA17_Chr3g0120861 27.042 355 206 14 348 678 31 356 1.31e-24 106
Msa0060370 MtrunA17_Chr3g0120861 25.449 334 179 11 31 323 37 341 1.60e-20 94.0
Msa0060370 MtrunA17_Chr8g0349301 31.741 293 164 11 355 632 37 308 1.47e-24 105
Msa0060370 MtrunA17_Chr8g0349301 27.181 298 178 10 32 304 37 320 3.86e-23 100
Msa0060370 MtrunA17_Chr8g0349331 28.012 332 198 11 10 330 10 311 2.07e-24 105
Msa0060370 MtrunA17_Chr8g0349331 27.869 366 186 14 325 669 2 310 2.54e-24 104
Msa0060370 MtrunA17_Chr3g0104831 29.897 291 161 11 416 683 29 299 2.10e-24 104
Msa0060370 MtrunA17_Chr3g0104831 28.897 263 147 7 98 330 34 286 1.08e-17 84.7
Msa0060370 MtrunA17_Chr7g0275011 30.556 360 188 15 355 686 34 359 2.71e-24 105
Msa0060370 MtrunA17_Chr2g0294301 28.530 347 206 12 355 682 35 358 3.69e-24 105
Msa0060370 MtrunA17_Chr7g0275001 29.360 344 197 14 355 677 25 343 7.60e-24 103
Msa0060370 MtrunA17_Chr5g0438641 28.418 373 208 15 323 669 2 341 7.96e-24 103
Msa0060370 MtrunA17_Chr5g0438641 26.036 338 172 11 31 323 31 335 5.03e-19 89.4
Msa0060370 MtrunA17_Chr1g0156901 26.503 366 209 14 329 667 24 356 9.94e-24 103
Msa0060370 MtrunA17_Chr4g0046151 28.721 383 199 19 335 676 17 366 1.20e-23 103
Msa0060370 MtrunA17_Chr4g0046151 26.197 355 201 14 10 325 16 348 8.21e-17 82.8
Msa0060370 MtrunA17_Chr5g0405821 30.422 332 188 16 354 665 42 350 1.48e-23 103
Msa0060370 MtrunA17_Chr5g0405821 25.419 358 194 12 11 325 23 350 1.27e-18 88.2
Msa0060370 MtrunA17_Chr5g0405831 27.557 352 209 13 350 680 38 364 2.60e-23 102
Msa0060370 MtrunA17_Chr3g0105401 28.235 340 192 14 354 669 27 338 2.77e-23 102
Msa0060370 MtrunA17_Chr3g0105401 26.608 342 189 14 31 335 27 343 4.46e-17 83.6
Msa0060370 MtrunA17_Chr1g0156891 27.397 365 209 14 330 667 15 350 2.89e-23 102
Msa0060370 MtrunA17_Chr1g0156891 24.119 369 205 12 5 329 15 352 1.94e-17 84.7
Msa0060370 MtrunA17_Chr3g0131321 27.507 349 207 12 353 681 32 354 3.33e-23 102
Msa0060370 MtrunA17_Chr3g0099231 29.143 350 202 14 354 681 27 352 4.07e-23 102
Msa0060370 MtrunA17_Chr2g0294311 27.990 393 214 18 328 686 9 366 4.26e-23 102
Msa0060370 MtrunA17_Chr2g0294311 26.503 366 192 15 10 326 10 347 1.74e-16 82.0
Msa0060370 MtrunA17_Chr3g0099151 28.242 347 199 12 354 676 86 406 5.30e-23 102
Msa0060370 MtrunA17_Chr8g0371481 27.714 350 199 14 349 673 35 355 8.68e-23 100
Msa0060370 MtrunA17_Chr8g0380041 25.852 352 217 10 354 686 30 356 1.07e-22 100
Msa0060370 MtrunA17_Chr8g0380041 25.364 343 173 10 31 326 30 336 3.52e-16 80.9
Msa0060370 MtrunA17_Chr2g0283191 26.216 370 210 15 329 665 13 352 1.21e-22 100
Msa0060370 MtrunA17_Chr2g0285061 26.039 361 220 11 329 669 8 341 2.46e-22 99.4
Msa0060370 MtrunA17_Chr4g0008851 26.330 376 227 14 332 686 13 359 6.82e-22 98.2
Msa0060370 MtrunA17_Chr3g0092131 27.027 370 204 18 333 673 4 336 8.72e-22 97.8
Msa0060370 MtrunA17_Chr1g0182811 28.796 382 216 15 329 686 11 360 9.46e-22 97.8
Msa0060370 MtrunA17_Chr6g0457921 27.513 378 221 15 330 681 3 353 9.91e-22 97.8
Msa0060370 MtrunA17_Chr3g0142941 28.696 345 199 14 339 665 36 351 1.12e-21 97.4
Msa0060370 MtrunA17_Chr8g0371471 27.557 352 196 17 349 673 35 354 1.15e-21 97.4
Msa0060370 MtrunA17_Chr7g0275021 27.714 350 194 14 355 677 34 351 1.96e-21 96.7
Msa0060370 MtrunA17_Chr2g0301551 29.968 317 158 15 401 691 37 315 2.40e-21 95.5
Msa0060370 MtrunA17_Chr2g0301551 26.087 299 136 9 78 330 37 296 7.39e-20 91.3
Msa0060370 MtrunA17_Chr2g0301571 30.094 319 155 16 401 691 37 315 3.39e-21 95.1
Msa0060370 MtrunA17_Chr2g0301571 26.087 299 136 9 78 330 37 296 6.86e-20 91.3
Msa0060370 MtrunA17_Chr3g0086641 26.776 366 211 15 329 669 13 346 5.86e-21 95.5
Msa0060370 MtrunA17_Chr3g0086641 24.863 366 190 10 7 326 17 343 8.93e-17 82.8
Msa0060370 MtrunA17_Chr5g0434621 26.774 310 179 12 387 678 62 341 7.42e-21 94.7
Msa0060370 MtrunA17_Chr5g0434621 25.519 337 177 14 36 330 29 333 5.02e-13 71.2
Msa0060370 MtrunA17_Chr3g0142921 26.608 342 194 13 350 665 31 341 1.57e-20 94.0
Msa0060370 MtrunA17_Chr3g0142921 24.390 369 204 15 7 329 6 345 1.08e-14 76.3
Msa0060370 MtrunA17_Chr4g0027571 29.825 228 124 7 465 673 3 213 1.93e-20 90.9
Msa0060370 MtrunA17_Chr4g0027571 30.588 170 95 5 159 327 60 207 5.87e-11 63.2
Msa0060370 MtrunA17_Chr1g0189931 28.612 353 187 14 355 677 32 349 2.24e-20 93.6
Msa0060370 MtrunA17_Chr3g0077571 26.400 375 227 14 329 686 8 350 3.80e-20 92.8
Msa0060370 MtrunA17_Chr3g0077571 25.706 354 212 11 2 329 6 334 3.62e-18 86.7
Msa0060370 MtrunA17_Chr8g0344931 29.947 374 202 13 331 676 4 345 4.62e-20 92.4
Msa0060370 MtrunA17_Chr8g0344931 27.273 341 168 9 32 330 37 339 1.30e-18 88.2
Msa0060370 MtrunA17_Chr1g0189891 30.508 354 191 17 355 686 29 349 7.02e-20 92.0
Msa0060370 MtrunA17_Chr3g0077581 25.501 349 217 11 354 681 35 361 1.67e-19 90.9
Msa0060370 MtrunA17_Chr3g0104801 42.857 119 60 3 30 140 42 160 4.27e-19 85.5
Msa0060370 MtrunA17_Chr3g0104801 38.583 127 65 5 353 467 42 167 7.19e-15 73.6
Msa0060370 MtrunA17_Chr5g0420811 26.198 313 188 10 326 617 3 293 3.10e-18 87.0
Msa0060370 MtrunA17_Chr5g0420811 25.325 308 173 10 7 277 6 293 2.31e-15 78.2
Msa0060370 MtrunA17_Chr8g0371491 26.331 357 214 13 335 669 16 345 8.35e-18 85.9
Msa0060370 MtrunA17_Chr7g0229581 32.919 161 84 4 527 677 4 150 1.09e-17 80.9
Msa0060370 MtrunA17_Chr5g0437421 24.642 349 208 13 354 676 31 350 1.65e-17 84.7
Msa0060370 MtrunA17_Chr4g0060811 25.333 300 182 11 390 673 67 340 1.79e-17 84.7
Msa0060370 MtrunA17_Chr3g0085231 26.111 360 193 13 354 686 30 343 1.21e-16 82.0
Msa0060370 MtrunA17_Chr4g0017431 25.067 375 231 13 334 686 10 356 1.34e-16 82.0
Msa0060370 MtrunA17_Chr7g0273111 48.780 82 41 1 5 85 8 89 1.46e-16 75.9
Msa0060370 MtrunA17_Chr1g0178931 24.069 349 206 15 347 673 27 338 7.44e-16 79.7
Msa0060370 MtrunA17_Chr7g0266061 25.301 332 204 11 356 673 43 344 1.38e-15 79.0
Msa0060370 MtrunA17_Chr2g0284921 26.036 338 194 12 354 669 33 336 1.64e-15 79.0
Msa0060370 MtrunA17_Chr3g0085881 24.620 329 202 11 354 668 32 328 3.89e-15 77.4
Msa0060370 MtrunA17_Chr8g0370981 25.908 413 225 18 325 677 13 404 6.21e-15 77.4
Msa0060370 MtrunA17_Chr2g0284951 25.485 361 208 14 332 668 7 330 1.63e-14 75.9
Msa0060370 MtrunA17_Chr2g0284991 24.202 376 227 14 331 681 9 351 5.72e-14 74.3
Msa0060370 MtrunA17_Chr1g0198351 24.074 324 208 10 347 660 35 330 6.84e-14 73.9
Msa0060370 MtrunA17_Chr2g0285001 24.384 365 213 15 331 669 9 336 7.67e-14 73.9
Msa0060370 MtrunA17_Chr6g0459921 25.000 248 149 8 445 669 106 339 2.66e-13 72.0
Msa0060370 MtrunA17_Chr6g0455661 25.888 197 122 6 484 669 267 450 1.70e-12 70.1
Msa0060370 MtrunA17_Chr1g0198381 23.653 334 210 12 356 675 3 305 2.40e-12 68.6
Msa0060370 MtrunA17_Chr2g0301561 28.755 233 128 11 400 608 36 254 2.62e-12 67.8
Msa0060370 MtrunA17_Chr8g0370951 23.590 390 221 15 325 676 2 352 4.64e-12 68.2
Msa0060370 MtrunA17_Chr8g0380031 27.004 237 141 9 354 576 83 301 5.47e-12 68.2
Msa0060370 MtrunA17_Chr3g0106911 32.877 146 80 6 381 523 8 138 1.41e-11 64.7
Msa0060370 MtrunA17_Chr5g0440501 24.138 261 150 7 445 684 4 237 3.36e-11 64.3
Msa0060370 MtrunA17_Chr6g0469521 36.634 101 51 3 530 620 31 128 4.15e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060370 AT3G26430.1 49.867 377 176 3 328 691 4 380 5.92e-128 384
Msa0060370 AT3G26430.1 50.301 332 123 3 28 323 27 352 4.35e-108 333
Msa0060370 AT1G67830.1 50.141 355 156 5 351 692 26 372 2.27e-121 367
Msa0060370 AT1G67830.1 48.961 337 130 3 27 327 25 355 5.25e-109 335
Msa0060370 AT5G14450.1 46.133 375 183 5 333 692 19 389 1.06e-110 340
Msa0060370 AT5G14450.1 45.170 383 164 5 5 351 14 386 2.89e-105 326
Msa0060370 AT3G27950.1 44.828 377 171 10 334 689 10 370 7.81e-90 285
Msa0060370 AT3G27950.1 41.085 387 174 10 4 353 3 372 3.47e-80 260
Msa0060370 AT1G54790.1 41.892 370 193 10 328 681 5 368 3.28e-83 268
Msa0060370 AT1G54790.1 36.757 370 180 9 2 330 1 357 1.26e-65 222
Msa0060370 AT1G54790.3 42.077 366 190 10 332 681 10 369 6.98e-82 265
Msa0060370 AT1G54790.3 40.331 362 161 10 11 330 10 358 5.87e-72 238
Msa0060370 AT4G01130.1 40.160 376 208 6 327 689 9 380 7.38e-82 265
Msa0060370 AT4G01130.1 36.579 380 196 6 8 351 10 380 2.87e-73 242
Msa0060370 AT1G56670.1 40.426 376 193 9 329 691 16 373 2.39e-81 263
Msa0060370 AT1G56670.1 37.105 380 173 13 6 344 10 364 3.52e-60 207
Msa0060370 AT1G09390.1 40.314 382 198 9 322 689 3 368 1.02e-78 256
Msa0060370 AT1G09390.1 38.462 351 154 10 31 344 36 361 4.14e-61 209
Msa0060370 AT1G54790.2 39.241 395 192 11 329 681 6 394 2.40e-77 254
Msa0060370 AT1G54790.2 34.343 396 180 10 2 330 1 383 5.26e-60 207
Msa0060370 AT3G05180.1 40.456 351 188 7 352 686 33 378 4.39e-73 241
Msa0060370 AT3G05180.1 41.739 345 151 8 29 334 33 366 4.03e-69 231
Msa0060370 AT3G62280.1 40.401 349 173 11 354 687 35 363 2.60e-68 228
Msa0060370 AT3G62280.1 36.311 347 151 9 22 327 26 343 1.15e-51 183
Msa0060370 AT4G01130.2 41.414 297 152 8 327 608 9 298 6.07e-63 213
Msa0060370 AT4G01130.2 35.974 303 151 5 8 274 10 305 3.80e-53 186
Msa0060370 AT1G56670.2 40.411 292 152 6 329 608 16 297 1.44e-58 200
Msa0060370 AT1G56670.2 36.333 300 138 8 8 268 12 297 8.65e-44 159
Msa0060370 AT4G01130.3 37.627 295 170 5 408 689 1 294 2.04e-55 191
Msa0060370 AT4G01130.3 32.343 303 160 6 85 351 1 294 1.42e-43 159
Msa0060370 AT1G28600.1 35.616 365 190 11 352 691 28 372 4.90e-55 193
Msa0060370 AT1G28600.1 33.509 379 177 12 1 330 1 353 2.30e-45 167
Msa0060370 AT1G28580.1 33.763 388 209 11 331 689 9 377 1.78e-53 189
Msa0060370 AT1G28580.1 30.081 369 187 8 10 330 15 360 2.51e-40 152
Msa0060370 AT1G28650.1 34.908 381 203 11 330 682 9 372 2.53e-53 189
Msa0060370 AT1G28650.1 33.154 371 179 9 7 330 12 360 5.26e-47 171
Msa0060370 AT1G31550.2 33.702 362 197 9 352 689 33 375 2.69e-49 178
Msa0060370 AT1G31550.2 34.167 360 162 10 21 330 24 358 2.41e-47 172
Msa0060370 AT1G28640.1 32.391 389 212 9 325 682 2 370 4.32e-49 177
Msa0060370 AT1G28640.1 31.830 377 185 8 7 334 9 362 5.65e-46 168
Msa0060370 AT1G28670.1 33.592 387 211 11 325 682 2 371 1.49e-48 175
Msa0060370 AT1G28670.1 31.452 372 186 9 7 330 9 359 2.31e-43 161
Msa0060370 AT5G45910.1 35.000 360 187 12 353 682 28 370 3.76e-48 174
Msa0060370 AT5G45910.1 34.286 385 167 14 1 330 5 358 6.91e-44 162
Msa0060370 AT3G62280.2 39.636 275 140 8 354 614 35 297 4.84e-48 171
Msa0060370 AT3G62280.2 35.495 293 127 7 22 273 26 297 3.54e-38 144
Msa0060370 AT1G28590.1 32.124 386 218 9 329 689 10 376 8.16e-47 171
Msa0060370 AT1G28590.1 32.703 370 175 11 10 330 15 359 6.66e-44 163
Msa0060370 AT1G28610.2 32.804 378 211 11 330 682 6 365 1.16e-45 167
Msa0060370 AT1G28610.2 31.551 374 182 11 5 330 6 353 1.91e-40 153
Msa0060370 AT1G31550.1 32.687 361 199 9 352 689 33 372 1.34e-45 167
Msa0060370 AT1G31550.1 33.148 359 164 10 21 330 24 355 6.13e-44 163
Msa0060370 AT2G27360.1 31.362 389 219 12 328 689 7 374 8.14e-44 162
Msa0060370 AT2G27360.1 31.720 372 182 9 7 330 10 357 3.91e-42 158
Msa0060370 AT1G28570.1 30.357 392 227 11 325 689 2 374 1.83e-43 161
Msa0060370 AT1G28570.1 29.947 374 187 9 7 330 9 357 1.83e-40 153
Msa0060370 AT1G28660.2 31.959 388 214 12 325 682 2 369 1.99e-43 161
Msa0060370 AT1G28660.2 30.000 370 192 10 7 330 9 357 2.13e-39 150
Msa0060370 AT1G28660.1 32.391 389 212 13 325 682 2 370 7.05e-43 159
Msa0060370 AT1G28660.1 29.919 371 192 10 7 330 9 358 3.11e-40 152
Msa0060370 AT3G48460.1 29.379 354 204 8 353 681 36 368 6.22e-38 145
Msa0060370 AT3G48460.1 29.834 362 207 8 6 334 14 361 1.02e-33 133
Msa0060370 AT1G28580.2 31.190 311 176 9 398 689 5 296 1.69e-37 142
Msa0060370 AT1G28580.2 26.174 298 155 6 75 330 5 279 1.37e-21 96.7
Msa0060370 AT3G16370.1 29.586 338 190 12 354 669 29 340 9.13e-29 118
Msa0060370 AT3G16370.1 27.545 334 187 12 31 330 29 341 2.95e-23 102
Msa0060370 AT5G40990.1 29.032 372 225 13 326 676 4 357 1.36e-27 115
Msa0060370 AT5G40990.1 25.067 371 212 11 1 330 6 351 5.21e-21 95.9
Msa0060370 AT5G22810.1 28.736 348 190 13 354 673 33 350 2.62e-27 114
Msa0060370 AT5G22810.1 29.042 334 184 13 31 330 33 347 2.02e-22 100
Msa0060370 AT5G03820.1 28.116 345 195 13 354 673 32 348 2.78e-27 114
Msa0060370 AT5G03820.1 27.879 330 186 11 31 327 32 342 3.84e-24 105
Msa0060370 AT2G23540.1 27.966 354 193 13 355 676 48 371 5.50e-27 114
Msa0060370 AT2G23540.1 26.330 376 185 16 9 326 20 361 2.03e-16 82.4
Msa0060370 AT5G03820.2 27.083 384 219 15 319 673 25 376 5.86e-27 114
Msa0060370 AT5G03820.2 27.879 330 186 11 31 327 60 370 1.13e-23 104
Msa0060370 AT1G75900.1 28.152 341 191 13 353 669 41 351 6.14e-27 113
Msa0060370 AT4G10950.2 27.684 354 209 13 354 686 70 397 1.04e-26 113
Msa0060370 AT4G10950.2 26.176 340 175 14 31 326 70 377 2.00e-19 91.7
Msa0060370 AT5G42170.1 28.863 343 198 12 350 673 45 360 3.12e-26 111
Msa0060370 AT1G59406.1 28.177 362 214 13 331 673 6 340 7.72e-26 110
Msa0060370 AT1G59030.1 28.177 362 214 13 331 673 6 340 7.72e-26 110
Msa0060370 AT1G58725.1 28.177 362 214 13 331 673 6 340 7.72e-26 110
Msa0060370 AT1G53920.1 28.152 341 204 10 341 663 34 351 1.25e-25 110
Msa0060370 AT1G53920.1 25.000 364 202 10 4 323 15 351 5.26e-23 102
Msa0060370 AT5G45670.1 26.593 361 221 11 328 669 3 338 1.65e-25 109
Msa0060370 AT1G71120.1 28.022 364 194 11 342 676 18 342 1.94e-25 108
Msa0060370 AT1G71120.1 25.068 367 178 12 11 330 20 336 1.18e-20 94.7
Msa0060370 AT2G42990.1 28.108 370 210 15 329 672 1 340 1.00e-24 106
Msa0060370 AT2G42990.1 25.070 359 199 13 12 330 10 338 4.24e-19 90.1
Msa0060370 AT5G03810.1 25.862 348 198 13 354 673 29 344 1.05e-24 106
Msa0060370 AT5G03810.1 27.108 332 193 12 27 327 25 338 3.77e-21 96.3
Msa0060370 AT3G14225.1 30.117 342 202 13 355 676 37 361 1.62e-24 106
Msa0060370 AT3G14225.1 25.067 371 212 11 14 344 19 363 4.31e-15 78.2
Msa0060370 AT3G14225.2 30.499 341 198 13 355 676 37 357 1.74e-24 106
Msa0060370 AT3G14225.2 25.067 371 208 9 14 344 19 359 3.64e-15 78.2
Msa0060370 AT3G50400.1 28.125 352 200 14 353 676 32 358 2.15e-24 106
Msa0060370 AT4G10950.1 27.401 354 206 14 354 686 70 393 3.37e-24 105
Msa0060370 AT4G10950.1 25.882 340 172 15 31 326 70 373 5.75e-17 84.0
Msa0060370 AT4G26790.1 26.393 341 206 13 353 673 27 342 3.92e-24 105
Msa0060370 AT4G26790.1 24.850 334 183 11 30 323 27 332 8.02e-18 86.3
Msa0060370 AT4G26790.2 26.393 341 206 13 353 673 27 342 3.92e-24 105
Msa0060370 AT4G26790.2 24.850 334 183 11 30 323 27 332 8.02e-18 86.3
Msa0060370 AT5G63170.1 28.732 355 198 12 330 665 3 321 4.03e-24 104
Msa0060370 AT1G28600.2 35.586 222 114 8 1 211 1 204 5.96e-24 101
Msa0060370 AT1G28600.2 35.829 187 100 5 352 528 28 204 1.92e-21 94.0
Msa0060370 AT5G08460.1 27.346 373 219 14 333 680 28 373 6.39e-24 105
Msa0060370 AT5G08460.1 25.895 363 189 12 9 324 28 357 2.71e-19 90.9
Msa0060370 AT1G20120.1 30.194 361 194 17 348 680 71 401 8.31e-24 104
Msa0060370 AT3G04290.1 29.060 351 188 13 355 677 29 346 9.15e-24 103
Msa0060370 AT1G53940.2 30.398 352 203 14 355 686 39 368 1.01e-23 104
Msa0060370 AT2G04570.1 26.110 383 207 15 330 678 6 346 9.73e-23 100
Msa0060370 AT5G15720.1 26.190 336 205 10 354 669 29 341 1.01e-22 100
Msa0060370 AT5G15720.1 24.198 343 182 11 31 327 29 339 5.66e-17 83.6
Msa0060370 AT2G31540.1 25.641 390 223 16 324 683 2 354 1.69e-22 100
Msa0060370 AT5G45960.1 29.553 291 166 13 355 620 47 323 1.80e-22 100
Msa0060370 AT2G30310.1 26.393 341 204 11 347 665 26 341 2.14e-22 100
Msa0060370 AT1G29670.1 25.281 356 220 12 334 669 10 339 2.22e-22 100
Msa0060370 AT5G45950.1 26.254 339 197 13 355 672 40 346 2.51e-22 99.8
Msa0060370 AT3G43570.1 25.915 355 207 12 329 673 3 311 4.39e-22 98.2
Msa0060370 AT5G37690.1 27.869 305 172 13 387 673 64 338 4.40e-22 99.0
Msa0060370 AT3G53100.1 26.361 349 206 13 348 673 22 342 4.45e-22 99.0
Msa0060370 AT3G53100.1 27.171 357 204 16 7 330 6 339 1.60e-15 79.3
Msa0060370 AT1G06990.1 25.074 339 206 13 353 669 35 347 5.00e-22 99.0
Msa0060370 AT1G06990.1 25.068 367 220 12 1 331 2 349 6.04e-21 95.5
Msa0060370 AT1G58430.1 27.645 293 171 10 353 620 33 309 9.40e-22 98.2
Msa0060370 AT1G29670.2 25.137 366 229 11 323 669 68 407 1.06e-21 99.0
Msa0060370 AT1G20130.2 27.507 349 199 14 349 669 178 500 1.10e-21 99.8
Msa0060370 AT1G20130.1 27.507 349 199 14 349 669 198 520 1.18e-21 99.8
Msa0060370 AT2G30220.1 26.966 356 201 15 353 683 31 352 1.94e-21 97.1
Msa0060370 AT4G18970.1 25.672 335 206 10 354 669 27 337 2.13e-21 97.1
Msa0060370 AT4G18970.2 25.672 335 206 10 354 669 27 337 3.71e-21 97.1
Msa0060370 AT2G24560.1 26.954 371 211 15 324 665 2 341 3.95e-21 96.3
Msa0060370 AT1G28610.1 33.641 217 116 7 5 211 6 204 4.41e-21 93.6
Msa0060370 AT1G28610.1 34.239 184 101 5 348 521 24 197 5.74e-19 87.4
Msa0060370 AT5G18430.1 28.571 343 200 12 355 676 28 346 5.15e-21 95.9
Msa0060370 AT1G75890.3 26.087 391 230 15 308 669 26 386 9.76e-21 95.5
Msa0060370 AT1G54030.1 28.669 293 154 9 387 666 87 337 1.02e-20 95.9
Msa0060370 AT1G54030.1 24.214 318 182 11 33 325 53 336 1.81e-13 73.6
Msa0060370 AT1G75880.2 27.174 368 212 15 334 673 26 365 1.26e-20 94.7
Msa0060370 AT5G03610.1 26.140 329 202 12 356 670 44 345 1.53e-20 94.4
Msa0060370 AT1G75880.1 27.100 369 212 16 334 673 26 366 1.91e-20 94.4
Msa0060370 AT1G33811.1 26.113 337 207 12 354 669 33 348 2.54e-20 94.0
Msa0060370 AT1G33811.1 24.927 341 207 10 19 326 21 345 6.31e-13 71.2
Msa0060370 AT1G75890.2 27.177 379 216 16 320 669 10 357 2.60e-20 94.0
Msa0060370 AT1G54020.2 27.151 372 211 15 334 686 12 342 3.62e-20 93.6
Msa0060370 AT1G54020.2 25.419 358 195 11 5 327 4 324 4.33e-16 81.3
Msa0060370 AT1G58520.3 27.859 341 197 14 350 673 25 333 3.96e-20 92.8
Msa0060370 AT1G58525.1 27.859 341 197 14 350 673 25 333 3.96e-20 92.8
Msa0060370 AT5G33370.1 28.035 346 198 14 355 677 30 347 5.29e-20 92.8
Msa0060370 AT1G53990.1 27.882 373 211 15 331 676 7 348 6.74e-20 92.4
Msa0060370 AT1G71691.2 26.243 362 210 14 343 679 41 370 8.17e-20 92.4
Msa0060370 AT1G71691.2 25.305 328 197 9 31 330 54 361 3.15e-15 78.6
Msa0060370 AT1G73610.1 28.280 343 190 15 350 673 30 335 8.23e-20 92.0
Msa0060370 AT1G20135.1 25.737 373 205 13 323 670 2 327 8.57e-20 91.7
Msa0060370 AT1G20132.1 26.023 342 196 13 354 669 60 370 1.86e-19 91.7
Msa0060370 AT1G28570.3 28.436 211 126 7 494 689 11 211 2.04e-19 88.2
Msa0060370 AT1G28570.3 26.562 192 95 4 177 330 11 194 2.27e-14 73.6
Msa0060370 AT1G28570.2 25.085 295 186 11 412 689 26 302 2.43e-19 90.1
Msa0060370 AT1G28570.2 26.562 192 95 4 177 330 102 285 3.92e-14 74.3
Msa0060370 AT1G28570.2 51.250 80 31 2 7 79 9 87 4.21e-14 74.3
Msa0060370 AT2G40250.1 27.336 289 175 12 355 620 36 312 2.69e-19 90.9
Msa0060370 AT1G75890.1 27.551 392 211 17 320 669 10 370 4.66e-19 90.1
Msa0060370 AT5G03980.1 28.796 191 110 5 494 669 127 306 7.86e-19 88.6
Msa0060370 AT5G03980.1 23.856 306 172 10 74 330 14 307 5.20e-15 77.0
Msa0060370 AT1G54000.1 26.273 373 224 15 331 686 12 350 9.88e-19 89.4
Msa0060370 AT3G43550.1 28.667 300 178 12 329 608 3 286 1.06e-18 87.4
Msa0060370 AT1G54010.1 26.738 374 221 14 331 686 12 350 1.32e-18 89.0
Msa0060370 AT1G74460.1 28.443 334 192 16 357 669 25 332 1.74e-18 88.2
Msa0060370 AT1G29660.1 25.137 366 228 13 323 669 2 340 2.22e-18 87.8
Msa0060370 AT1G75930.1 27.148 291 180 8 347 617 21 299 3.87e-18 87.0
Msa0060370 AT1G23500.1 29.474 285 161 10 355 617 35 301 4.30e-18 86.7
Msa0060370 AT3G14820.1 25.449 334 212 12 354 673 31 341 9.46e-18 85.9
Msa0060370 AT3G14820.1 28.904 301 172 13 9 280 12 299 7.60e-17 83.2
Msa0060370 AT1G71250.1 23.947 380 224 12 333 680 15 361 1.37e-17 85.9
Msa0060370 AT2G03980.2 27.114 343 187 17 352 666 40 347 1.80e-17 85.1
Msa0060370 AT2G03980.3 27.114 343 187 17 352 666 40 347 1.80e-17 85.1
Msa0060370 AT2G03980.1 27.114 343 187 17 352 666 40 347 1.80e-17 85.1
Msa0060370 AT2G03980.4 27.114 343 187 17 352 666 40 347 1.80e-17 85.1
Msa0060370 AT2G04020.1 31.280 211 127 8 352 555 40 239 1.84e-17 83.2
Msa0060370 AT2G19010.1 25.429 350 200 13 354 681 29 339 2.73e-17 84.3
Msa0060370 AT2G24560.2 27.532 316 181 13 324 610 2 298 2.92e-17 84.0
Msa0060370 AT2G04020.2 31.280 211 127 8 352 555 40 239 3.74e-17 83.6
Msa0060370 AT5G37690.2 26.557 305 168 14 387 673 64 330 3.94e-17 84.0
Msa0060370 AT2G19010.2 25.429 350 200 13 354 681 59 369 5.30e-17 84.0
Msa0060370 AT5G55050.1 29.805 359 188 17 349 675 33 359 6.47e-17 83.6
Msa0060370 AT3G14220.1 24.138 377 219 16 326 676 2 337 6.72e-17 83.6
Msa0060370 AT2G19060.1 26.197 355 193 13 354 681 29 341 8.45e-17 82.8
Msa0060370 AT1G75910.1 26.621 293 174 11 350 617 23 299 1.15e-16 82.4
Msa0060370 AT1G75910.1 22.740 365 197 13 11 330 7 331 3.09e-12 68.9
Msa0060370 AT1G53940.1 31.387 274 153 11 355 608 39 297 2.97e-16 80.5
Msa0060370 AT5G15720.3 24.183 306 187 9 381 669 33 310 3.10e-16 80.9
Msa0060370 AT1G71691.3 27.148 291 167 12 343 608 41 311 4.90e-16 80.1
Msa0060370 AT1G71691.3 24.910 277 172 7 20 268 43 311 3.93e-12 68.2
Msa0060370 AT5G15720.2 25.818 275 173 8 354 608 29 292 7.80e-16 79.7
Msa0060370 AT5G15720.2 23.549 293 158 9 22 268 20 292 7.45e-13 70.5
Msa0060370 AT4G30140.1 27.011 348 195 14 354 681 32 340 7.05e-15 77.0
Msa0060370 AT3G09930.2 24.242 330 208 13 356 670 40 342 1.08e-14 76.6
Msa0060370 AT3G09930.1 24.242 330 208 13 356 670 40 342 1.08e-14 76.6
Msa0060370 AT5G41890.1 24.290 317 187 14 387 676 69 359 1.17e-14 76.6
Msa0060370 AT4G16230.1 29.699 266 141 13 331 573 4 246 1.21e-14 74.7
Msa0060370 AT5G03600.1 24.702 336 194 13 354 670 13 308 2.00e-14 75.5
Msa0060370 AT5G03600.2 24.702 336 194 13 354 670 48 343 2.68e-14 75.5
Msa0060370 AT1G75920.2 26.059 307 191 13 334 617 6 299 4.47e-14 74.7
Msa0060370 AT1G71691.1 23.920 301 177 12 399 679 1 269 6.90e-13 70.1
Msa0060370 AT2G31550.1 26.163 172 103 6 519 678 58 217 2.37e-12 67.4
Msa0060370 AT1G54030.2 28.780 205 111 6 387 583 87 264 3.25e-12 68.6
Msa0060370 AT5G33370.2 30.000 220 117 10 355 555 30 231 1.08e-11 67.4
Msa0060370 AT1G54020.1 25.000 296 167 12 406 686 1 256 1.25e-11 66.6
Msa0060370 AT1G54020.5 25.000 296 167 12 406 686 1 256 1.25e-11 66.6
Msa0060370 AT1G54020.3 25.000 296 167 12 406 686 1 256 1.25e-11 66.6
Msa0060370 AT3G14210.1 24.425 348 199 14 345 667 26 334 1.89e-11 67.0

Find 145 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCTTTGTAGCAAATAT+TGG 0.178924 1_2:+18042500 None:intergenic
TATAAAATTCTTTACTATAT+CGG 0.214825 1_2:+18039714 None:intergenic
ACCAATATCAAATGTGTATA+AGG 0.220968 1_2:+18039801 None:intergenic
TACTGAATTTGAAGGGAAAA+TGG 0.224045 1_2:+18040047 None:intergenic
TGGATGTGTGCCTTTAATTT+TGG 0.224209 1_2:-18039458 Msa0060370:CDS
AACCATCTACTAGAATAATA+TGG 0.227325 1_2:-18038993 Msa0060370:CDS
CTTTATAGCATATGGAAAAT+TGG 0.228348 1_2:+18039435 None:intergenic
GGAAAATTGGCCAAAATTAA+AGG 0.238264 1_2:+18039448 None:intergenic
AGCGCATATCTTGATTCTTT+GGG 0.238639 1_2:-18046756 Msa0060370:CDS
TGTCTAATGAATTGTGTTCT+AGG 0.252829 1_2:+18046600 None:intergenic
TTTGGAATAATAATCTTCTT+TGG 0.255011 1_2:+18039825 None:intergenic
AAGCGCATATCTTGATTCTT+TGG 0.258296 1_2:-18046757 Msa0060370:CDS
AATTAGGGGCCAGGTCATTT+TGG 0.264269 1_2:-18039501 Msa0060370:CDS
CCATTGGGTATAATACTATT+AGG 0.269389 1_2:+18040080 None:intergenic
GTAATTTCAGCTCAAAGTTT+TGG 0.272793 1_2:-18046792 Msa0060370:intron
ATCTAGAATATATACAAATT+AGG 0.275565 1_2:-18039517 Msa0060370:intron
TTCCCTGCAATCTTCAACTT+TGG 0.275888 1_2:-18047937 Msa0060370:CDS
AATTCTTTGTAGCAAATATT+GGG 0.277876 1_2:+18042501 None:intergenic
TCTAGAATATATACAAATTA+GGG 0.278589 1_2:-18039516 Msa0060370:intron
TTCTTTATATTAGACATATA+TGG 0.280042 1_2:-18038790 Msa0060370:three_prime_UTR
TTGGAATAATAATCTTCTTT+GGG 0.286703 1_2:+18039826 None:intergenic
TCCCATATTATTCTAGTAGA+TGG 0.294746 1_2:+18038991 None:intergenic
ATCCTTCCATTCCACTAAAT+AGG 0.295141 1_2:-18038900 Msa0060370:CDS
CGAATCATTCTTGATTTCAT+AGG 0.296923 1_2:-18042344 Msa0060370:intron
GCCTTATACACATTTGATAT+TGG 0.309552 1_2:-18039802 Msa0060370:CDS
TTGAGTACCATTGACCTCTA+TGG 0.311057 1_2:+18045356 None:intergenic
TGGCTATCCTTTATAGCATA+TGG 0.325290 1_2:+18039427 None:intergenic
GGAGAAATCATAAACATAAA+TGG 0.328429 1_2:-18039045 Msa0060370:CDS
ACTTATTTCCACAGACCTAA+TGG 0.339588 1_2:-18047847 Msa0060370:CDS
GCTTTGTACACATTTGATAT+TGG 0.345019 1_2:-18046440 Msa0060370:CDS
CAAGGAAGAGTATTTCTCTA+AGG 0.350686 1_2:-18046462 Msa0060370:CDS
ATAAAATTCTTTACTATATC+GGG 0.350692 1_2:+18039715 None:intergenic
TTGTAACATGCCCTATTTAG+TGG 0.352126 1_2:+18038889 None:intergenic
GTCTTTGATCAAATCTCTAC+TGG 0.362400 1_2:-18038934 Msa0060370:CDS
GACCATCTGCAAGAGTGAAT+TGG 0.365145 1_2:-18045311 Msa0060370:CDS
TTAGCTGAAAAGGATGAAAA+TGG 0.366007 1_2:-18045711 Msa0060370:intron
ATCAAATGTGTATAAGGCTT+TGG 0.373582 1_2:+18039807 None:intergenic
CGTCTAATTGTCGATTTCAT+TGG 0.373711 1_2:-18047808 Msa0060370:intron
TCCTTCCATTCCACTAAATA+GGG 0.381991 1_2:-18038899 Msa0060370:CDS
TCACCAAAGTTGAAGATTGC+AGG 0.385266 1_2:+18047934 None:intergenic
CTAGTTGTTTGTTGTGGCTA+TGG 0.395855 1_2:-18045420 Msa0060370:CDS
AAATGCTGATACTGGTGGTT+TGG 0.396433 1_2:-18042444 Msa0060370:CDS
GCACCAAAGTTAAATATTGC+AGG 0.407053 1_2:+18042470 None:intergenic
GAGAAACTATTGATTATCTC+TGG 0.411103 1_2:+18046353 None:intergenic
CTTAGAGAAATACTCTTCCT+TGG 0.412709 1_2:+18046463 None:intergenic
GACATGGTTTACTTTGTAAG+AGG 0.416752 1_2:-18046506 Msa0060370:CDS
CTTATTTCCACAGACCTAAT+GGG 0.420130 1_2:-18047846 Msa0060370:CDS
GGTGCTTCAAATGCTGATAC+TGG 0.421451 1_2:-18042452 Msa0060370:CDS
AATCTCTGAATTGAGTGTAT+TGG 0.422061 1_2:+18046628 None:intergenic
CCATCAGAGTACCTCCCATT+AGG 0.423139 1_2:+18047832 None:intergenic
GATATTGGTCAAAATGATCT+TGG 0.426312 1_2:-18046425 Msa0060370:CDS
ACCATCTGCAAGAGTGAATT+GGG 0.426866 1_2:-18045310 Msa0060370:CDS
ATACACAACACTGGACCAAT+TGG 0.429145 1_2:-18039478 Msa0060370:CDS
GCAAAATTCATTAGAGATCA+AGG 0.430565 1_2:-18039996 Msa0060370:intron
ATTAAGATATGGACTTAGGT+AGG 0.436390 1_2:+18040166 None:intergenic
TTTCCTGCAATATTTAACTT+TGG 0.440023 1_2:-18042473 Msa0060370:CDS
ACCATCTACTAGAATAATAT+GGG 0.442115 1_2:-18038992 Msa0060370:CDS
GATCCTAGAGAATTAAGATA+TGG 0.444570 1_2:+18040155 None:intergenic
CAAGCACTTCAGTTGCCAAA+TGG 0.446432 1_2:-18042410 Msa0060370:CDS
TCAAGATATGCGCTTAGATA+AGG 0.460946 1_2:+18046765 None:intergenic
TTAGAGAAATACTCTTCCTT+GGG 0.465277 1_2:+18046464 None:intergenic
CCCACCTAGTATTATACCTC+AGG 0.465429 1_2:-18046679 Msa0060370:CDS
GGTCAAAATGATCTTACTGC+TGG 0.468242 1_2:-18039781 Msa0060370:CDS
AAACTCAGACACTGGTGGCT+TGG 0.473491 1_2:-18047908 Msa0060370:CDS
CCACCCTGAGGTATAATACT+AGG 0.476832 1_2:+18046675 None:intergenic
CAAGATATGCGCTTAGATAA+GGG 0.482225 1_2:+18046766 None:intergenic
GTCTCTCCATATGGTGGCGT+TGG 0.483501 1_2:+18047868 None:intergenic
AGTCCATATCTTAATTCTCT+AGG 0.487332 1_2:-18040158 Msa0060370:CDS
AAATGGACTAAACATTCCAT+TGG 0.487410 1_2:+18040064 None:intergenic
ATTAAAGGCACACATCCAAT+TGG 0.488389 1_2:+18039463 None:intergenic
GAGAATTAAGATATGGACTT+AGG 0.490134 1_2:+18040162 None:intergenic
TGGAAATAAGTCTCTCCATA+TGG 0.492180 1_2:+18047859 None:intergenic
CTATGAAATCAAGAATGATT+CGG 0.493581 1_2:+18042345 None:intergenic
AAATGGTACAAACATTGTTG+TGG 0.497281 1_2:-18039028 Msa0060370:CDS
GGTGCAAACTTTGCAACAGC+AGG 0.502492 1_2:-18040119 Msa0060370:CDS
TGTATTGCTTTGCACAACCT+TGG 0.503056 1_2:+18039407 None:intergenic
AATGGTACAAACATTGTTGT+GGG 0.503607 1_2:-18039027 Msa0060370:CDS
ACATATGTGATTGCAGCTAA+AGG 0.510042 1_2:+18045606 None:intergenic
TGGCAACTGAAGTGCTTGAA+AGG 0.511071 1_2:+18042415 None:intergenic
ATTGATTGTACTGAATTTGA+AGG 0.512446 1_2:+18040039 None:intergenic
GGTCAAAATGATCTTGGTGC+TGG 0.513823 1_2:-18046419 Msa0060370:CDS
CAAGCACCAACGCCACCATA+TGG 0.515260 1_2:-18047874 Msa0060370:CDS
GATCCACACGAAGTTGAGCT+AGG 0.516606 1_2:+18039344 None:intergenic
ATATATACAAATTAGGGGCC+AGG 0.517339 1_2:-18039510 Msa0060370:CDS
CATGTGGCATGTTGTGGCTA+TGG 0.526634 1_2:-18039102 Msa0060370:CDS
ACATGCCCTATTTAGTGGAA+TGG 0.526856 1_2:+18038894 None:intergenic
TATAATTATAGCAATAGTGT+TGG 0.527004 1_2:-18045390 Msa0060370:CDS
AATGGACTAAACATTCCATT+GGG 0.529064 1_2:+18040065 None:intergenic
CATCACCTAGTTGTTTGTTG+TGG 0.531642 1_2:-18045426 Msa0060370:CDS
ATGGTGGCGTTGGTGCTTGA+AGG 0.535800 1_2:+18047878 None:intergenic
ATATTTCAATCATAAGTTGA+AGG 0.539994 1_2:-18045658 Msa0060370:CDS
ATTCTTTGTAGCAAATATTG+GGG 0.543366 1_2:+18042502 None:intergenic
TATTGGACATCAAGGTAGAA+AGG 0.543537 1_2:+18046645 None:intergenic
TTAAGATATGGACTTAGGTA+GGG 0.544125 1_2:+18040167 None:intergenic
TATAGCAATAGTGTTGGATG+TGG 0.553912 1_2:-18045384 Msa0060370:CDS
TGGAATAATAATCTTCTTTG+GGG 0.555591 1_2:+18039827 None:intergenic
AGCAATAGTGTTGGATGTGG+AGG 0.556583 1_2:-18045381 Msa0060370:CDS
ACATATGTGATTGCAGCTAG+TGG 0.560723 1_2:+18039319 None:intergenic
CATAGCCACAACAAACAACT+AGG 0.561004 1_2:+18045421 None:intergenic
TCCCAATTCACTCTTGCAGA+TGG 0.561326 1_2:+18045309 None:intergenic
GCCCTATTTAGTGGAATGGA+AGG 0.562414 1_2:+18038898 None:intergenic
GGTGACTCAAACTCAGACAC+TGG 0.562687 1_2:-18047916 Msa0060370:CDS
GCGCATATCTTGATTCTTTG+GGG 0.564900 1_2:-18046755 Msa0060370:CDS
TTGATTGTACTGAATTTGAA+GGG 0.569678 1_2:+18040040 None:intergenic
GTTGTTTGTTGTGGCTATGG+AGG 0.573272 1_2:-18045417 Msa0060370:CDS
CACCAAAGTTGAAGATTGCA+GGG 0.576163 1_2:+18047935 None:intergenic
CCTAATAGTATTATACCCAA+TGG 0.577765 1_2:-18040080 Msa0060370:CDS
ATTGAGTGTATTGGACATCA+AGG 0.579239 1_2:+18046637 None:intergenic
AGCCCTAGCTCAACTTCGTG+TGG 0.589422 1_2:-18039347 Msa0060370:CDS
CTACCACATGTGGCATGTTG+TGG 0.589804 1_2:-18039108 Msa0060370:CDS
TATAACATTCGTGCTAGATG+TGG 0.594579 1_2:-18039066 Msa0060370:CDS
CCTGAGGTATAATACTAGGT+GGG 0.598100 1_2:+18046679 None:intergenic
GCTTCAAATGCTGATACTGG+TGG 0.598979 1_2:-18042449 Msa0060370:CDS
ATTTGCAAGCTTGATGCCCA+AGG 0.600463 1_2:-18046480 Msa0060370:CDS
AAAATAACTGTGTTAAATCG+TGG 0.600847 1_2:-18038829 Msa0060370:three_prime_UTR
TCTGCAAGAGTGAATTGGGA+TGG 0.604576 1_2:-18045306 Msa0060370:CDS
CAATGAAATCGACAATTAGA+CGG 0.606252 1_2:+18047809 None:intergenic
ATCCACACGAAGTTGAGCTA+GGG 0.606515 1_2:+18039345 None:intergenic
CCCTGAGGTATAATACTAGG+TGG 0.606983 1_2:+18046678 None:intergenic
GGAGGAACCATAGAGGTCAA+TGG 0.609556 1_2:-18045363 Msa0060370:CDS
CTAGGATCAAACTTCACACA+TGG 0.612367 1_2:-18040140 Msa0060370:CDS
CTGAGGTATAATACTAGGTG+GGG 0.612955 1_2:+18046680 None:intergenic
AGTACCTCCCATTAGGTCTG+TGG 0.617351 1_2:+18047839 None:intergenic
TGGTGGCGTTGGTGCTTGAA+GGG 0.619536 1_2:+18047879 None:intergenic
GTGCAAACTTTGCAACAGCA+GGG 0.631688 1_2:-18040118 Msa0060370:CDS
CCACCTAGTATTATACCTCA+GGG 0.636374 1_2:-18046678 Msa0060370:CDS
TCTACTAGAATAATATGGGA+TGG 0.641361 1_2:-18038988 Msa0060370:CDS
TTCTTTGTAGCAAATATTGG+GGG 0.645637 1_2:+18042503 None:intergenic
CCTAATGGGAGGTACTCTGA+TGG 0.649182 1_2:-18047832 Msa0060370:CDS
AGGATTTGAGCTACCACATG+TGG 0.650013 1_2:-18039118 Msa0060370:CDS
GTGGCATGTTGTGGCTATGG+AGG 0.654822 1_2:-18039099 Msa0060370:CDS
GACTCAAACTCAGACACTGG+TGG 0.655403 1_2:-18047913 Msa0060370:CDS
TGAGGTATAATACTAGGTGG+GGG 0.657709 1_2:+18046681 None:intergenic
TAGCCACAACATGCCACATG+TGG 0.671628 1_2:+18039105 None:intergenic
AAATAAGTCTCTCCATATGG+TGG 0.673013 1_2:+18047862 None:intergenic
ACACAATTCATTAGACAACA+AGG 0.676208 1_2:-18046594 Msa0060370:intron
TATGCTATAAAGGATAGCCA+AGG 0.679315 1_2:-18039424 Msa0060370:CDS
ATTTCCACAGACCTAATGGG+AGG 0.690874 1_2:-18047843 Msa0060370:CDS
CTAGAATATATACAAATTAG+GGG 0.698873 1_2:-18039515 Msa0060370:intron
CCTAGTATTATACCTCAGGG+TGG 0.705655 1_2:-18046675 Msa0060370:CDS
TGGATGTGGAGGAACCATAG+AGG 0.718015 1_2:-18045370 Msa0060370:CDS
GTTGTGTATCCAAAATGACC+TGG 0.720607 1_2:+18039492 None:intergenic
ATTGCTACTTTCAATCACTG+TGG 0.728286 1_2:+18047972 None:intergenic
AAAGGACTGTATCCACCCTG+AGG 0.752311 1_2:+18046663 None:intergenic
GGATGGTACACATTACACAG+AGG 0.801423 1_2:-18038971 Msa0060370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAATAATTTTTTAATT+GGG + chr1_2:18043495-18043514 None:intergenic 0.0%
!!! TTAAAAAATAATTTTTTAAT+TGG + chr1_2:18043496-18043515 None:intergenic 0.0%
!!! ATTTTTTATAAAAAATAATA+AGG + chr1_2:18045698-18045717 None:intergenic 0.0%
!!! ATATTTTTTTTTTTTGGTAA+TGG - chr1_2:18039149-18039168 Msa0060370:intron 10.0%
!!! ATTAATATTCACATATTTTT+AGG - chr1_2:18040256-18040275 Msa0060370:intron 10.0%
!!! ATTTGATTTGTTTATATAAT+AGG + chr1_2:18040811-18040830 None:intergenic 10.0%
!!! ATTCTTCTATATATATTTTA+TGG + chr1_2:18042903-18042922 None:intergenic 10.0%
!! ATTGATTAAAATAGAAAATA+GGG + chr1_2:18043171-18043190 None:intergenic 10.0%
!! AATTGATTAAAATAGAAAAT+AGG + chr1_2:18043172-18043191 None:intergenic 10.0%
!!! AATAATAATTCGTTTTTTTA+TGG - chr1_2:18043354-18043373 Msa0060370:intron 10.0%
!!! ATTCAAAAAAAATATTTTAC+AGG - chr1_2:18043421-18043440 Msa0060370:intron 10.0%
!!! TTCAAAAAAAATATTTTACA+GGG - chr1_2:18043422-18043441 Msa0060370:intron 10.0%
!!! ATTATTATTTTTGTATAGTT+TGG + chr1_2:18043855-18043874 None:intergenic 10.0%
!!! TTTTTTTTTATTCTTTTTTG+AGG + chr1_2:18044682-18044701 None:intergenic 10.0%
!!! TATAAGAGTATTAATTAATT+CGG - chr1_2:18045523-18045542 Msa0060370:intron 10.0%
!!! ATGATTTTGTATTTTTTTTT+TGG - chr1_2:18046155-18046174 Msa0060370:intron 10.0%
!!! ATCATTATTTTATTTTTTTG+AGG - chr1_2:18046216-18046235 Msa0060370:intron 10.0%
!!! AATTATTTCTATATTTATGA+AGG - chr1_2:18046566-18046585 Msa0060370:intron 10.0%
!!! ATTATTTCTATATTTATGAA+GGG - chr1_2:18046567-18046586 Msa0060370:intron 10.0%
!! TATAAAATTCTTTACTATAT+CGG + chr1_2:18047091-18047110 None:intergenic 10.0%
!!! ATATTTTAATTTAAAGTTGA+AGG - chr1_2:18047431-18047450 Msa0060370:intron 10.0%
!! TACAATAAACAAACATAAAA+TGG + chr1_2:18039262-18039281 None:intergenic 15.0%
!!! TAGTTCAATTTTTTAAACAT+TGG + chr1_2:18039557-18039576 None:intergenic 15.0%
!! AAAAATCAAATTAAATTGAC+CGG + chr1_2:18039846-18039865 None:intergenic 15.0%
!! TGAAATTACAAATCATAAAT+TGG + chr1_2:18039999-18040018 None:intergenic 15.0%
!!! GTATGGTATTAAATAATTTT+TGG + chr1_2:18040760-18040779 None:intergenic 15.0%
!! GAAAATACACAAAAATATAA+GGG + chr1_2:18041069-18041088 None:intergenic 15.0%
!!! AATGTATATTTTAACATAAG+AGG - chr1_2:18041764-18041783 Msa0060370:intron 15.0%
!!! ATGTATATTTTAACATAAGA+GGG - chr1_2:18041765-18041784 Msa0060370:intron 15.0%
!!! TTTTTTTCAATATTCTCTTT+GGG + chr1_2:18042374-18042393 None:intergenic 15.0%
!!! TTTTTTTTCAATATTCTCTT+TGG + chr1_2:18042375-18042394 None:intergenic 15.0%
!!! GTTTTTTTTTACCATATTTA+TGG + chr1_2:18042514-18042533 None:intergenic 15.0%
!!! TATTTTTTAAATCTGATCAT+TGG - chr1_2:18042976-18042995 Msa0060370:intron 15.0%
!! TTGATTAAAATAGAAAATAG+GGG + chr1_2:18043170-18043189 None:intergenic 15.0%
!! AAAAGAATAAAAAAAAACTG+TGG - chr1_2:18044685-18044704 Msa0060370:intron 15.0%
!! TAATATTGATCTTTCATAAA+TGG - chr1_2:18045552-18045571 Msa0060370:intron 15.0%
!!! ATGGTTTTTTTTTTTTTTTG+TGG - chr1_2:18045571-18045590 Msa0060370:CDS 15.0%
!!! TTACTAAAAATAGTGTTTTT+TGG - chr1_2:18045755-18045774 Msa0060370:intron 15.0%
!! TACCTATTATGATTATTATT+AGG + chr1_2:18045847-18045866 None:intergenic 15.0%
!!! ATATTTTTTGTTGAGATTTA+AGG + chr1_2:18045914-18045933 None:intergenic 15.0%
!!! CGTCTTTTTATTATTATATT+TGG + chr1_2:18045929-18045948 None:intergenic 15.0%
!!! TCAATTGATTTTATCTTTAT+TGG + chr1_2:18046097-18046116 None:intergenic 15.0%
!! TTAAAACGAATTTAAATATG+AGG + chr1_2:18046343-18046362 None:intergenic 15.0%
!! TATATAGTGTTTATGTAAAT+GGG + chr1_2:18046483-18046502 None:intergenic 15.0%
!!! AGTGATTATGATTTTAATTA+AGG - chr1_2:18046880-18046899 Msa0060370:intron 15.0%
!! GAAATTAAGAAAGAAAAAAT+TGG + chr1_2:18046917-18046936 None:intergenic 15.0%
!! ATAAAATTCTTTACTATATC+GGG + chr1_2:18047090-18047109 None:intergenic 15.0%
!!! ATCTAGAATATATACAAATT+AGG - chr1_2:18047285-18047304 Msa0060370:intron 15.0%
!!! TCTAGAATATATACAAATTA+GGG - chr1_2:18047286-18047305 Msa0060370:intron 15.0%
!! TTAAATCTTCATTAATATGT+AGG - chr1_2:18047664-18047683 Msa0060370:intron 15.0%
!! TTCTTTATATTAGACATATA+TGG - chr1_2:18048012-18048031 Msa0060370:CDS 15.0%
!!! GAAATTTTCATGAGTTTAAT+TGG - chr1_2:18039109-18039128 Msa0060370:CDS 20.0%
!! AAACAAACATAAAATGGTTT+CGG + chr1_2:18039256-18039275 None:intergenic 20.0%
!! ATAGTTATACATACATGTTT+AGG + chr1_2:18039495-18039514 None:intergenic 20.0%
!!! GATTTTTTGTGAATAATTGA+AGG + chr1_2:18039707-18039726 None:intergenic 20.0%
!! TTATGAACTAAGATTGTTTA+AGG + chr1_2:18039809-18039828 None:intergenic 20.0%
!!! AAAAGGATGTTATTATGTTT+TGG + chr1_2:18039879-18039898 None:intergenic 20.0%
!!! AAAACATAATAACATCCTTT+TGG - chr1_2:18039878-18039897 Msa0060370:intron 20.0%
!!! AATATTCACATATTTTTAGG+TGG - chr1_2:18040259-18040278 Msa0060370:intron 20.0%
!! AAACCATGTCTTTATTATTA+AGG + chr1_2:18040286-18040305 None:intergenic 20.0%
!! TAGTTTCTCCAAAAATATTA+AGG - chr1_2:18040463-18040482 Msa0060370:intron 20.0%
!!! TTGAACTACCTTAATATTTT+TGG + chr1_2:18040474-18040493 None:intergenic 20.0%
!! AATAGTTCAAACATTTAGAA+AGG + chr1_2:18040500-18040519 None:intergenic 20.0%
!! CAAACTTATTATATGTCTTA+TGG - chr1_2:18040540-18040559 Msa0060370:intron 20.0%
!! GCAAGTTAAAAAAATTCTAT+AGG - chr1_2:18040604-18040623 Msa0060370:intron 20.0%
!! TTTGATCTGTTAAAAAATGA+AGG - chr1_2:18040632-18040651 Msa0060370:intron 20.0%
!! TTGATCTGTTAAAAAATGAA+GGG - chr1_2:18040633-18040652 Msa0060370:intron 20.0%
!!! TTGATTTGTAAAACTGTTTT+TGG - chr1_2:18040686-18040705 Msa0060370:intron 20.0%
!! AAATTGTATAATATACCACA+AGG - chr1_2:18040884-18040903 Msa0060370:intron 20.0%
!! AGATCAATAAATTAAGAAAG+GGG + chr1_2:18040960-18040979 None:intergenic 20.0%
!! GAGATCAATAAATTAAGAAA+GGG + chr1_2:18040961-18040980 None:intergenic 20.0%
!! TGAGATCAATAAATTAAGAA+AGG + chr1_2:18040962-18040981 None:intergenic 20.0%
!! GGAAAATACACAAAAATATA+AGG + chr1_2:18041070-18041089 None:intergenic 20.0%
!!! ATATTTCAATCATAAGTTGA+AGG - chr1_2:18041144-18041163 Msa0060370:intron 20.0%
!!! TTTTTTTGGGTTGTTAAAAA+GGG + chr1_2:18041245-18041264 None:intergenic 20.0%
!!! ATTTTTTTGGGTTGTTAAAA+AGG + chr1_2:18041246-18041265 None:intergenic 20.0%
!! TTTAACAACCCAAAAAAATA+TGG - chr1_2:18041247-18041266 Msa0060370:intron 20.0%
!!! TTGACTTACCATATTTTTTT+GGG + chr1_2:18041258-18041277 None:intergenic 20.0%
!!! TTTGACTTACCATATTTTTT+TGG + chr1_2:18041259-18041278 None:intergenic 20.0%
!! TATAATTATAGCAATAGTGT+TGG - chr1_2:18041412-18041431 Msa0060370:intron 20.0%
!!! TAAAGCTCAATATATTTTGA+TGG + chr1_2:18041626-18041645 None:intergenic 20.0%
!! CTTATGCAAAAGATATTATT+GGG + chr1_2:18041734-18041753 None:intergenic 20.0%
!! TCTTATGCAAAAGATATTAT+TGG + chr1_2:18041735-18041754 None:intergenic 20.0%
!!! TTTTTTCAATATTCTCTTTG+GGG + chr1_2:18042373-18042392 None:intergenic 20.0%
!!! ATATTTTATGGATTACTCAA+AGG + chr1_2:18042891-18042910 None:intergenic 20.0%
!!! TATTTGTGTAAAATTTTACG+TGG - chr1_2:18043133-18043152 Msa0060370:intron 20.0%
!!! AAAAAAAAAACTTTTACAGG+GGG + chr1_2:18043282-18043301 None:intergenic 20.0%
!!! GAAAAAAAAAACTTTTACAG+GGG + chr1_2:18043283-18043302 None:intergenic 20.0%
!!! GGAAAAAAAAAACTTTTACA+GGG + chr1_2:18043284-18043303 None:intergenic 20.0%
!!! TGGAAAAAAAAAACTTTTAC+AGG + chr1_2:18043285-18043304 None:intergenic 20.0%
!!! CAAAAATTTTGGTTTTTGTA+TGG + chr1_2:18043326-18043345 None:intergenic 20.0%
!!! TCTGAAGAAATTTTTTTTAC+AGG - chr1_2:18043392-18043411 Msa0060370:intron 20.0%
!!! AAGAAATTTTTTTTACAGGA+GGG - chr1_2:18043396-18043415 Msa0060370:intron 20.0%
!! ATGTCTCTTAAAAACAAATT+GGG + chr1_2:18043696-18043715 None:intergenic 20.0%
!! AATGTCTCTTAAAAACAAAT+TGG + chr1_2:18043697-18043716 None:intergenic 20.0%
!! AATTCTTTGTAGCAAATATT+GGG + chr1_2:18044304-18044323 None:intergenic 20.0%
!! ATGTTCATACAAAATGAAAT+AGG + chr1_2:18044501-18044520 None:intergenic 20.0%
!!! TTTATTCTTTTTTGAGGAAA+CGG + chr1_2:18044676-18044695 None:intergenic 20.0%
!! ATTAGAGAATTCAAATTGTA+TGG - chr1_2:18044746-18044765 Msa0060370:intron 20.0%
!! TTAGAGAATTCAAATTGTAT+GGG - chr1_2:18044747-18044766 Msa0060370:intron 20.0%
!!! GTTTTATCATAGAAACAATA+TGG - chr1_2:18044793-18044812 Msa0060370:intron 20.0%
!!! TGTGATTTTTAAGAAAATAG+GGG + chr1_2:18044881-18044900 None:intergenic 20.0%
!!! GTGTGATTTTTAAGAAAATA+GGG + chr1_2:18044882-18044901 None:intergenic 20.0%
!!! TGTGTGATTTTTAAGAAAAT+AGG + chr1_2:18044883-18044902 None:intergenic 20.0%
!! AAAAATTACTAGACTTAATG+TGG + chr1_2:18045164-18045183 None:intergenic 20.0%
!!! AGTCTAGTAATTTTTTTCAA+AGG - chr1_2:18045169-18045188 Msa0060370:intron 20.0%
!!! TTTTTGCTTATATTTTGAGA+CGG + chr1_2:18045212-18045231 None:intergenic 20.0%
!!! GTTTTTTTTTTTTTTTGTGG+TGG - chr1_2:18045574-18045593 Msa0060370:CDS 20.0%
!! CTATTATGATTATTATTAGG+CGG + chr1_2:18045844-18045863 None:intergenic 20.0%
!!! TAGAATAGAAAATCTCATTT+TGG + chr1_2:18046186-18046205 None:intergenic 20.0%
!! GAGATAAATTCTGATATTTA+GGG + chr1_2:18046387-18046406 None:intergenic 20.0%
!! AGAGATAAATTCTGATATTT+AGG + chr1_2:18046388-18046407 None:intergenic 20.0%
!! GAACATTTCATATGAATTTA+CGG + chr1_2:18046425-18046444 None:intergenic 20.0%
!! TATGAAATGTTCATTTCATT+TGG - chr1_2:18046433-18046452 Msa0060370:CDS 20.0%
!! CTATATAGTGTTTATGTAAA+TGG + chr1_2:18046484-18046503 None:intergenic 20.0%
!! TTGGAATAATAATCTTCTTT+GGG + chr1_2:18046979-18046998 None:intergenic 20.0%
!!! TTTGGAATAATAATCTTCTT+TGG + chr1_2:18046980-18046999 None:intergenic 20.0%
!!! GAATTTTATAGAGAATATCA+AGG - chr1_2:18047101-18047120 Msa0060370:intron 20.0%
!! TAGATAAAGTTAGCAAAAAA+GGG + chr1_2:18047137-18047156 None:intergenic 20.0%
!! ATTAATAAAATGCAACTTAC+TGG - chr1_2:18047260-18047279 Msa0060370:intron 20.0%
!! CTAGAATATATACAAATTAG+GGG - chr1_2:18047287-18047306 Msa0060370:intron 20.0%
!! TTCCAAAATCCAAAAAAATA+CGG - chr1_2:18047534-18047553 Msa0060370:intron 20.0%
!!! ATCGATCATATTTTTTAGTT+AGG - chr1_2:18047570-18047589 Msa0060370:intron 20.0%
!!! TCGATCATATTTTTTAGTTA+GGG - chr1_2:18047571-18047590 Msa0060370:intron 20.0%
!!! TTTTTTAGTTAGGGTATATT+TGG - chr1_2:18047580-18047599 Msa0060370:intron 20.0%
!!! ATCAAGTGTATCATTTTTTG+TGG - chr1_2:18038789-18038808 Msa0060370:three_prime_UTR 25.0%
! TGTAATATGTAGAACTTCTA+CGG + chr1_2:18039081-18039100 None:intergenic 25.0%
! AGAAGTTCTACATATTACAA+AGG - chr1_2:18039082-18039101 Msa0060370:CDS 25.0%
! TTCTACATATTACAAAGGTT+GGG - chr1_2:18039087-18039106 Msa0060370:CDS 25.0%
! AAAAACTTGAAACAAACAAC+TGG - chr1_2:18039388-18039407 Msa0060370:intron 25.0%
! TTGTGAATAATTGAAGGTTT+AGG + chr1_2:18039701-18039720 None:intergenic 25.0%
! CAAAAAATCAGACATTATAC+AGG - chr1_2:18039718-18039737 Msa0060370:CDS 25.0%
! ATTTGACTATAGTTTCATAG+TGG + chr1_2:18039770-18039789 None:intergenic 25.0%
!!! CAATCACTAATTTTTTAGGT+TGG + chr1_2:18040585-18040604 None:intergenic 25.0%
!!! CTTGCAATCACTAATTTTTT+AGG + chr1_2:18040589-18040608 None:intergenic 25.0%
! CAGAACAAAAATTTCGTTTA+AGG - chr1_2:18040734-18040753 Msa0060370:intron 25.0%
! ATACCCAATACAAAATAAGT+GGG + chr1_2:18040844-18040863 None:intergenic 25.0%
! TATACCCAATACAAAATAAG+TGG + chr1_2:18040845-18040864 None:intergenic 25.0%
!!! ATTTAAGACCCACTTTTTTA+GGG + chr1_2:18040930-18040949 None:intergenic 25.0%
!!! AATTTAAGACCCACTTTTTT+AGG + chr1_2:18040931-18040950 None:intergenic 25.0%
! ATTCAGGACATATACAATTT+GGG - chr1_2:18040998-18041017 Msa0060370:intron 25.0%
! AATACACAAAAATATAAGGG+AGG + chr1_2:18041066-18041085 None:intergenic 25.0%
! TGAATTATTCATTGATATGC+AGG - chr1_2:18041346-18041365 Msa0060370:intron 25.0%
!! AATGGTACTCAAATTTTTGT+AGG - chr1_2:18041457-18041476 Msa0060370:intron 25.0%
!! ATTTTCCATGAAATTTCTAC+TGG - chr1_2:18041550-18041569 Msa0060370:intron 25.0%
!!! ATATTTTGATGGAATTTCTG+TGG + chr1_2:18041615-18041634 None:intergenic 25.0%
!! AATAAAGTGTTCTTCTACAT+TGG - chr1_2:18041677-18041696 Msa0060370:intron 25.0%
!! ATAAAGTGTTCTTCTACATT+GGG - chr1_2:18041678-18041697 Msa0060370:intron 25.0%
! GATATTATTGGGTATGAAAT+TGG + chr1_2:18041723-18041742 None:intergenic 25.0%
!!! ATATTTTAACATAAGAGGGA+AGG - chr1_2:18041769-18041788 Msa0060370:intron 25.0%
!!! CATAATTCAAGCTTTTTTGT+AGG - chr1_2:18041796-18041815 Msa0060370:intron 25.0%
! AATGACTACACTCTATATAA+GGG + chr1_2:18041980-18041999 None:intergenic 25.0%
!! AAAAAGTGATCAATTTTCGT+CGG + chr1_2:18042349-18042368 None:intergenic 25.0%
! AAAAACAAGAAGAGAAATAG+AGG - chr1_2:18042391-18042410 Msa0060370:CDS 25.0%
! AAAACAAGAAGAGAAATAGA+GGG - chr1_2:18042392-18042411 Msa0060370:CDS 25.0%
! AGGTATTTATAGGTAGAAAT+GGG - chr1_2:18042471-18042490 Msa0060370:CDS 25.0%
!!! TAAAGTTTGTTAAAAACGTG+TGG - chr1_2:18042537-18042556 Msa0060370:CDS 25.0%
!!! CTATTTTAATCAATTCGACA+AGG - chr1_2:18043177-18043196 Msa0060370:intron 25.0%
!!! GAAGAAATTTTTTTTACAGG+AGG - chr1_2:18043395-18043414 Msa0060370:intron 25.0%
!!! CTGTAATATAGGTCATTTTT+GGG + chr1_2:18043454-18043473 None:intergenic 25.0%
! CAAAAATGACCTATATTACA+GGG - chr1_2:18043453-18043472 Msa0060370:intron 25.0%
! AAAAATGACCTATATTACAG+GGG - chr1_2:18043454-18043473 Msa0060370:intron 25.0%
! CACTACTCTTAATAATATAC+CGG + chr1_2:18043948-18043967 None:intergenic 25.0%
!! TTCTTTTTCTCTCTTTCTAT+TGG - chr1_2:18044007-18044026 Msa0060370:intron 25.0%
! TTTCTATTGGTCAAAAACAA+TGG - chr1_2:18044020-18044039 Msa0060370:intron 25.0%
! TGATCATATGATAATTCCAT+AGG - chr1_2:18044181-18044200 Msa0060370:intron 25.0%
! GTGTTTCATCAATAATTTCA+TGG - chr1_2:18044211-18044230 Msa0060370:intron 25.0%
! ATTCTTTGTAGCAAATATTG+GGG + chr1_2:18044303-18044322 None:intergenic 25.0%
! CAATTCTTTGTAGCAAATAT+TGG + chr1_2:18044305-18044324 None:intergenic 25.0%
!! TTTCCTGCAATATTTAACTT+TGG - chr1_2:18044329-18044348 Msa0060370:intron 25.0%
!!! ACTTTTTTCAATAGATCAAC+TGG - chr1_2:18044419-18044438 Msa0060370:intron 25.0%
! CTATGAAATCAAGAATGATT+CGG + chr1_2:18044460-18044479 None:intergenic 25.0%
! CATTTCCTCAAAAAACAAAA+AGG - chr1_2:18044989-18045008 Msa0060370:intron 25.0%
! GTGGTTTAACTAAAAAACAA+TGG + chr1_2:18045145-18045164 None:intergenic 25.0%
!! ACGAATTTTTCCTTGTATTT+TGG - chr1_2:18045293-18045312 Msa0060370:CDS 25.0%
!! CGAATTTTTCCTTGTATTTT+GGG - chr1_2:18045294-18045313 Msa0060370:CDS 25.0%
!! GTTTTGTCGTATAAATATGA+GGG + chr1_2:18045343-18045362 None:intergenic 25.0%
!! TGTTTTGTCGTATAAATATG+AGG + chr1_2:18045344-18045363 None:intergenic 25.0%
!! TTAGAGAACTTAAGTTGTAT+GGG + chr1_2:18045403-18045422 None:intergenic 25.0%
!! ATTAGAGAACTTAAGTTGTA+TGG + chr1_2:18045404-18045423 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG + chr1_2:18045619-18045638 None:intergenic 25.0%
! CGCCTAATAATAATCATAAT+AGG - chr1_2:18045842-18045861 Msa0060370:intron 25.0%
! ATAAATTCTGATATTTAGGG+TGG + chr1_2:18046384-18046403 None:intergenic 25.0%
!!! TATGTAAATGGGTTTGTTAT+TGG + chr1_2:18046472-18046491 None:intergenic 25.0%
! TTTGTGCTGAAGAAAAAAAA+TGG + chr1_2:18046604-18046623 None:intergenic 25.0%
! TTGATTGTACTGAATTTGAA+GGG + chr1_2:18046765-18046784 None:intergenic 25.0%
! ATTGATTGTACTGAATTTGA+AGG + chr1_2:18046766-18046785 None:intergenic 25.0%
!! TCTCTAATGAATTTTGCTTT+TGG + chr1_2:18046803-18046822 None:intergenic 25.0%
!! AATTTCAAAATTTTCTTGCC+AGG - chr1_2:18046931-18046950 Msa0060370:intron 25.0%
! TGGAATAATAATCTTCTTTG+GGG + chr1_2:18046978-18046997 None:intergenic 25.0%
! ACCAATATCAAATGTGTATA+AGG + chr1_2:18047004-18047023 None:intergenic 25.0%
! GTAGATAAAGTTAGCAAAAA+AGG + chr1_2:18047138-18047157 None:intergenic 25.0%
! CTTTATAGCATATGGAAAAT+TGG + chr1_2:18047370-18047389 None:intergenic 25.0%
!! CAATTTTCCATATGCTATAA+AGG - chr1_2:18047368-18047387 Msa0060370:intron 25.0%
! GGAGAAATCATAAACATAAA+TGG - chr1_2:18047757-18047776 Msa0060370:intron 25.0%
! AACCATCTACTAGAATAATA+TGG - chr1_2:18047809-18047828 Msa0060370:CDS 25.0%
! ACCATCTACTAGAATAATAT+GGG - chr1_2:18047810-18047829 Msa0060370:CDS 25.0%
! AAAATAACTGTGTTAAATCG+TGG - chr1_2:18047973-18047992 Msa0060370:CDS 25.0%
CAATGAAATCGACAATTAGA+CGG + chr1_2:18038996-18039015 None:intergenic 30.0%
GTTCTACATATTACAAAGGT+TGG - chr1_2:18039086-18039105 Msa0060370:CDS 30.0%
GACATGTGAATTTCATTGAT+GGG - chr1_2:18039648-18039667 Msa0060370:intron 30.0%
CATAATTCAATCAGTTGAAC+CGG - chr1_2:18039824-18039843 Msa0060370:CDS 30.0%
GTTGCAAGAGACATATAATT+CGG + chr1_2:18039926-18039945 None:intergenic 30.0%
! GTAATTTCAGCTCAAAGTTT+TGG - chr1_2:18040010-18040029 Msa0060370:CDS 30.0%
AATCTCTGAATTGAGTGTAT+TGG + chr1_2:18040177-18040196 None:intergenic 30.0%
TGTCTAATGAATTGTGTTCT+AGG + chr1_2:18040205-18040224 None:intergenic 30.0%
ACACAATTCATTAGACAACA+AGG - chr1_2:18040208-18040227 Msa0060370:intron 30.0%
GGTCCTTAATAATAAAGACA+TGG - chr1_2:18040280-18040299 Msa0060370:intron 30.0%
TTAGAGAAATACTCTTCCTT+GGG + chr1_2:18040341-18040360 None:intergenic 30.0%
GCTTTGTACACATTTGATAT+TGG - chr1_2:18040362-18040381 Msa0060370:intron 30.0%
GATATTGGTCAAAATGATCT+TGG - chr1_2:18040377-18040396 Msa0060370:intron 30.0%
! GAGAAACTATTGATTATCTC+TGG + chr1_2:18040452-18040471 None:intergenic 30.0%
AATACAAAATAAGTGGGTGT+AGG + chr1_2:18040838-18040857 None:intergenic 30.0%
!!! TACACCCACTTATTTTGTAT+TGG - chr1_2:18040837-18040856 Msa0060370:intron 30.0%
!!! ACACCCACTTATTTTGTATT+GGG - chr1_2:18040838-18040857 Msa0060370:intron 30.0%
ATATAGTAAGTTACACCTTG+TGG + chr1_2:18040902-18040921 None:intergenic 30.0%
!!! TTTAAGACCCACTTTTTTAG+GGG + chr1_2:18040929-18040948 None:intergenic 30.0%
TTGATCTCATTTGATGAACT+TGG - chr1_2:18040973-18040992 Msa0060370:intron 30.0%
GATTCAGGACATATACAATT+TGG - chr1_2:18040997-18041016 Msa0060370:intron 30.0%
! GTATTTTCCATTAGCTGAAA+AGG - chr1_2:18041081-18041100 Msa0060370:intron 30.0%
! TTTTCATCCTTTTCAGCTAA+TGG + chr1_2:18041091-18041110 None:intergenic 30.0%
TTAGCTGAAAAGGATGAAAA+TGG - chr1_2:18041091-18041110 Msa0060370:intron 30.0%
! GAAATTGGCATTGAAATCAT+AGG + chr1_2:18041708-18041727 None:intergenic 30.0%
CAATGACTACACTCTATATA+AGG + chr1_2:18041981-18042000 None:intergenic 30.0%
CGTTACAATTTACTATGATG+AGG - chr1_2:18042003-18042022 Msa0060370:intron 30.0%
ACAGATTTAAATTTAGCCCA+AGG - chr1_2:18042279-18042298 Msa0060370:intron 30.0%
CAGATTTAAATTTAGCCCAA+GGG - chr1_2:18042280-18042299 Msa0060370:intron 30.0%
AAAATACATCATCAACCCTT+GGG + chr1_2:18042298-18042317 None:intergenic 30.0%
! AAAAGTGATCAATTTTCGTC+GGG + chr1_2:18042348-18042367 None:intergenic 30.0%
!! AAGTATGGAGAGGTATTTAT+AGG - chr1_2:18042461-18042480 Msa0060370:CDS 30.0%
! GAGGTATTTATAGGTAGAAA+TGG - chr1_2:18042470-18042489 Msa0060370:CDS 30.0%
ATTTATGGTAGTTACAACCT+AGG + chr1_2:18042499-18042518 None:intergenic 30.0%
GGTTGTAACTACCATAAATA+TGG - chr1_2:18042500-18042519 Msa0060370:CDS 30.0%
TAATGGTCCAATGATGAATT+TGG - chr1_2:18042830-18042849 Msa0060370:intron 30.0%
TAAACAGCCAAATTCATCAT+TGG + chr1_2:18042840-18042859 None:intergenic 30.0%
TGATGAATTTGGCTGTTTAA+TGG - chr1_2:18042841-18042860 Msa0060370:intron 30.0%
GATGAATTTGGCTGTTTAAT+GGG - chr1_2:18042842-18042861 Msa0060370:intron 30.0%
TCGAGTAAAATGATATTGAG+CGG + chr1_2:18042950-18042969 None:intergenic 30.0%
TCAATTCGACAAGGTTTAAT+AGG - chr1_2:18043186-18043205 Msa0060370:intron 30.0%
! AGGTTTAATAGGTGATGTTT+TGG - chr1_2:18043197-18043216 Msa0060370:intron 30.0%
TATTACGATGATACTATTCC+AGG - chr1_2:18043224-18043243 Msa0060370:intron 30.0%
!!! TCGTTTTTTTATGGCCTATT+AGG - chr1_2:18043363-18043382 Msa0060370:intron 30.0%
!!! CGTTTTTTTATGGCCTATTA+GGG - chr1_2:18043364-18043383 Msa0060370:intron 30.0%
!!! GTTTTTTTATGGCCTATTAG+GGG - chr1_2:18043365-18043384 Msa0060370:intron 30.0%
!!! TTTTTTTATGGCCTATTAGG+GGG - chr1_2:18043366-18043385 Msa0060370:intron 30.0%
!! CCTGTAATATAGGTCATTTT+TGG + chr1_2:18043455-18043474 None:intergenic 30.0%
CCAAAAATGACCTATATTAC+AGG - chr1_2:18043452-18043471 Msa0060370:intron 30.0%
!! TTAGCATTGAGATACACTTT+TGG - chr1_2:18043610-18043629 Msa0060370:intron 30.0%
!! TGTTTTTAAGAGACATTTGC+AGG - chr1_2:18043700-18043719 Msa0060370:intron 30.0%
GTCATGATAGTTGTCAAAAA+TGG + chr1_2:18043983-18044002 None:intergenic 30.0%
ATGAAACACAAATGAACCTA+TGG + chr1_2:18044200-18044219 None:intergenic 30.0%
TTCTTTGTAGCAAATATTGG+GGG + chr1_2:18044302-18044321 None:intergenic 30.0%
TTGAAAAAAGTCTCTCCATT+TGG + chr1_2:18044410-18044429 None:intergenic 30.0%
CGAATCATTCTTGATTTCAT+AGG - chr1_2:18044458-18044477 Msa0060370:intron 30.0%
!! TGTTCATCACTTTTGAAAAG+TGG - chr1_2:18044538-18044557 Msa0060370:intron 30.0%
CATTCAAACAACTATTTGTG+TGG - chr1_2:18044611-18044630 Msa0060370:intron 30.0%
!! TTTTAAGAAAATAGGGGTGA+GGG + chr1_2:18044875-18044894 None:intergenic 30.0%
!! TTTTTAAGAAAATAGGGGTG+AGG + chr1_2:18044876-18044895 None:intergenic 30.0%
!! AGTCATCATTTCTTTTTCGT+TGG - chr1_2:18044942-18044961 Msa0060370:intron 30.0%
!!! CCAAACCTTTTTGTTTTTTG+AGG + chr1_2:18044997-18045016 None:intergenic 30.0%
CCTCAAAAAACAAAAAGGTT+TGG - chr1_2:18044994-18045013 Msa0060370:intron 30.0%
!! GTTTGATGATGTATCTTCTA+CGG + chr1_2:18045055-18045074 None:intergenic 30.0%
! CTAGTATTCGTGTATTGATA+AGG + chr1_2:18045086-18045105 None:intergenic 30.0%
!! TTTTTCCTTGTATTTTGGGA+CGG - chr1_2:18045298-18045317 Msa0060370:CDS 30.0%
AGAAACGTATTTCTCTCATT+AGG + chr1_2:18045421-18045440 None:intergenic 30.0%
ATACTCTTATAGTAGATGCA+CGG + chr1_2:18045514-18045533 None:intergenic 30.0%
!!! TTTTTTTTTTTTGTGGTGGC+TGG - chr1_2:18045578-18045597 Msa0060370:CDS 30.0%
!!! TTTTTTTTTTTGTGGTGGCT+GGG - chr1_2:18045579-18045598 Msa0060370:CDS 30.0%
CATAATATATACAAGGTCCA+GGG + chr1_2:18045612-18045631 None:intergenic 30.0%
TTAAGATATGGACTTAGGTA+GGG + chr1_2:18046638-18046657 None:intergenic 30.0%
ATTAAGATATGGACTTAGGT+AGG + chr1_2:18046639-18046658 None:intergenic 30.0%
GAGAATTAAGATATGGACTT+AGG + chr1_2:18046643-18046662 None:intergenic 30.0%
AGTCCATATCTTAATTCTCT+AGG - chr1_2:18046644-18046663 Msa0060370:CDS 30.0%
GATCCTAGAGAATTAAGATA+TGG + chr1_2:18046650-18046669 None:intergenic 30.0%
CCATTGGGTATAATACTATT+AGG + chr1_2:18046725-18046744 None:intergenic 30.0%
CCTAATAGTATTATACCCAA+TGG - chr1_2:18046722-18046741 Msa0060370:CDS 30.0%
!! AATGGACTAAACATTCCATT+GGG + chr1_2:18046740-18046759 None:intergenic 30.0%
!! AAATGGACTAAACATTCCAT+TGG + chr1_2:18046741-18046760 None:intergenic 30.0%
TACTGAATTTGAAGGGAAAA+TGG + chr1_2:18046758-18046777 None:intergenic 30.0%
GCAAAATTCATTAGAGATCA+AGG - chr1_2:18046806-18046825 Msa0060370:intron 30.0%
ATCAAATGTGTATAAGGCTT+TGG + chr1_2:18046998-18047017 None:intergenic 30.0%
GCCTTATACACATTTGATAT+TGG - chr1_2:18047000-18047019 Msa0060370:intron 30.0%
GGAAAATTGGCCAAAATTAA+AGG + chr1_2:18047357-18047376 None:intergenic 30.0%
!!! TTTTGGAAAAGAGAGTACTT+AGG + chr1_2:18047522-18047541 None:intergenic 30.0%
!!! CACCGTATTTTTTTGGATTT+TGG + chr1_2:18047539-18047558 None:intergenic 30.0%
!!! TTTGTCTCACCGTATTTTTT+TGG + chr1_2:18047546-18047565 None:intergenic 30.0%
AAATGGTACAAACATTGTTG+TGG - chr1_2:18047774-18047793 Msa0060370:intron 30.0%
AATGGTACAAACATTGTTGT+GGG - chr1_2:18047775-18047794 Msa0060370:intron 30.0%
TCCCATATTATTCTAGTAGA+TGG + chr1_2:18047814-18047833 None:intergenic 30.0%
TCTACTAGAATAATATGGGA+TGG - chr1_2:18047814-18047833 Msa0060370:CDS 30.0%
!! ATTGCTACTTTCAATCACTG+TGG + chr1_2:18038833-18038852 None:intergenic 35.0%
AAATAAGTCTCTCCATATGG+TGG + chr1_2:18038943-18038962 None:intergenic 35.0%
TGGAAATAAGTCTCTCCATA+TGG + chr1_2:18038946-18038965 None:intergenic 35.0%
ACTTATTTCCACAGACCTAA+TGG - chr1_2:18038955-18038974 Msa0060370:CDS 35.0%
CTTATTTCCACAGACCTAAT+GGG - chr1_2:18038956-18038975 Msa0060370:CDS 35.0%
!! CGTCTAATTGTCGATTTCAT+TGG - chr1_2:18038994-18039013 Msa0060370:CDS 35.0%
!! AGTTAGTCCAGTTGATAAGA+AGG - chr1_2:18039582-18039601 Msa0060370:intron 35.0%
GTTGAACTCAAACATTTACG+AGG + chr1_2:18039618-18039637 None:intergenic 35.0%
CGACATGTGAATTTCATTGA+TGG - chr1_2:18039647-18039666 Msa0060370:intron 35.0%
! GTTAATTTGGTACTGCCAAA+AGG + chr1_2:18039896-18039915 None:intergenic 35.0%
ATTCGGACCAAGAGTTAATT+TGG + chr1_2:18039909-18039928 None:intergenic 35.0%
CAAGATATGCGCTTAGATAA+GGG + chr1_2:18040039-18040058 None:intergenic 35.0%
TCAAGATATGCGCTTAGATA+AGG + chr1_2:18040040-18040059 None:intergenic 35.0%
AAGCGCATATCTTGATTCTT+TGG - chr1_2:18040045-18040064 Msa0060370:CDS 35.0%
AGCGCATATCTTGATTCTTT+GGG - chr1_2:18040046-18040065 Msa0060370:CDS 35.0%
GTTTGCACCATGTGAAAAAT+TGG + chr1_2:18040074-18040093 None:intergenic 35.0%
TATTGGACATCAAGGTAGAA+AGG + chr1_2:18040160-18040179 None:intergenic 35.0%
ATTGAGTGTATTGGACATCA+AGG + chr1_2:18040168-18040187 None:intergenic 35.0%
GACATGGTTTACTTTGTAAG+AGG - chr1_2:18040296-18040315 Msa0060370:intron 35.0%
CTTAGAGAAATACTCTTCCT+TGG + chr1_2:18040342-18040361 None:intergenic 35.0%
!! CAAGGAAGAGTATTTCTCTA+AGG - chr1_2:18040340-18040359 Msa0060370:intron 35.0%
!!! GTTTTTGGAACATGACAATC+TGG - chr1_2:18040701-18040720 Msa0060370:intron 35.0%
CAGCATAAGACAAACTTGTA+TGG + chr1_2:18040777-18040796 None:intergenic 35.0%
ATATACACCCCCTAAAAAAG+TGG - chr1_2:18040918-18040937 Msa0060370:intron 35.0%
TATACACCCCCTAAAAAAGT+GGG - chr1_2:18040919-18040938 Msa0060370:intron 35.0%
!!! TTAAGACCCACTTTTTTAGG+GGG + chr1_2:18040928-18040947 None:intergenic 35.0%
! TTTGATGAACTTGGTGATTC+AGG - chr1_2:18040982-18041001 Msa0060370:intron 35.0%
! ATTTGGGTGCTAGATCATTT+TGG - chr1_2:18041014-18041033 Msa0060370:intron 35.0%
! TCATTTTGGATACACAACAC+AGG - chr1_2:18041028-18041047 Msa0060370:intron 35.0%
ACATATGTGATTGCAGCTAA+AGG + chr1_2:18041199-18041218 None:intergenic 35.0%
! TATAGCAATAGTGTTGGATG+TGG - chr1_2:18041418-18041437 Msa0060370:intron 35.0%
AAGCTCCAGTAGAAATTTCA+TGG + chr1_2:18041558-18041577 None:intergenic 35.0%
!!! AAGCTTTTTTGTAGGACAGA+TGG - chr1_2:18041804-18041823 Msa0060370:intron 35.0%
CAGGTCGGATCATATATATA+GGG + chr1_2:18041839-18041858 None:intergenic 35.0%
TCAGGTCGGATCATATATAT+AGG + chr1_2:18041840-18041859 None:intergenic 35.0%
CAAAATACCAACTTCAGCAT+TGG + chr1_2:18041943-18041962 None:intergenic 35.0%
CAATTTACTATGATGAGGAG+CGG - chr1_2:18042008-18042027 Msa0060370:intron 35.0%
AATGCGCATATTAAGTAACG+TGG - chr1_2:18042174-18042193 Msa0060370:intron 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG + chr1_2:18042248-18042267 None:intergenic 35.0%
TGGGTAAAAAGAACTTCTTG+TGG - chr1_2:18042248-18042267 Msa0060370:intron 35.0%
GAAAATACATCATCAACCCT+TGG + chr1_2:18042299-18042318 None:intergenic 35.0%
! ATGATGTATTTTCCCCAAGA+AGG - chr1_2:18042306-18042325 Msa0060370:intron 35.0%
! AAAGTGATCAATTTTCGTCG+GGG + chr1_2:18042347-18042366 None:intergenic 35.0%
! GTTAAAAACGTGTGGATTGA+AGG - chr1_2:18042545-18042564 Msa0060370:CDS 35.0%
! AACTAACGCAAGGGTATATT+TGG - chr1_2:18042726-18042745 Msa0060370:intron 35.0%
! TATTTTACAGGGAGTAAACC+TGG + chr1_2:18043433-18043452 None:intergenic 35.0%
! TTTTTGTATGGCCTATTAGG+GGG + chr1_2:18043314-18043333 None:intergenic 35.0%
! GTTTTTGTATGGCCTATTAG+GGG + chr1_2:18043315-18043334 None:intergenic 35.0%
! GGTTTTTGTATGGCCTATTA+GGG + chr1_2:18043316-18043335 None:intergenic 35.0%
! TGGTTTTTGTATGGCCTATT+AGG + chr1_2:18043317-18043336 None:intergenic 35.0%
ACAAATTGGGACATTCATTG+TGG + chr1_2:18043683-18043702 None:intergenic 35.0%
AATACAATCCCCAGAAAGAA+AGG - chr1_2:18043743-18043762 Msa0060370:intron 35.0%
! ATAGCCTTTCTTGTTTGACT+GGG + chr1_2:18043890-18043909 None:intergenic 35.0%
! AATAGCCTTTCTTGTTTGAC+TGG + chr1_2:18043891-18043910 None:intergenic 35.0%
TCTACTTTGATATCTCGATC+CGG - chr1_2:18043926-18043945 Msa0060370:intron 35.0%
TGGCACAAATAGAGTTTCTT+AGG - chr1_2:18044231-18044250 Msa0060370:intron 35.0%
GCACCAAAGTTAAATATTGC+AGG + chr1_2:18044335-18044354 None:intergenic 35.0%
! TCAACTGGAAGATTTTCTGA+TGG - chr1_2:18044434-18044453 Msa0060370:intron 35.0%
GATAAAACATGATCATGTGC+TGG + chr1_2:18044781-18044800 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGCTG+GGG - chr1_2:18045580-18045599 Msa0060370:CDS 35.0%
GCATAATATATACAAGGTCC+AGG + chr1_2:18045613-18045632 None:intergenic 35.0%
GATCTATCGTTACACCATTT+AGG + chr1_2:18045676-18045695 None:intergenic 35.0%
! CTGCTGATATATCTGTGTTT+TGG + chr1_2:18045870-18045889 None:intergenic 35.0%
CAAAACACAGATATATCAGC+AGG - chr1_2:18045868-18045887 Msa0060370:intron 35.0%
!! GGTTTGTTATTGGCATTCTT+TGG + chr1_2:18046462-18046481 None:intergenic 35.0%
ACACTATATAGAAGCTCACA+TGG - chr1_2:18046493-18046512 Msa0060370:CDS 35.0%
ACACTATATAGAAGCTCACA+TGG - chr1_2:18046493-18046512 Msa0060370:CDS 35.0%
! TTTTCTTCAGCACAAAGCTT+TGG - chr1_2:18046608-18046627 Msa0060370:CDS 35.0%
! TTCAAAATTTTCTTGCCAGG+AGG - chr1_2:18046934-18046953 Msa0060370:intron 35.0%
!!! GATCTTACTGCTGGTTTTTT+TGG - chr1_2:18047030-18047049 Msa0060370:intron 35.0%
ATATATACAAATTAGGGGCC+AGG - chr1_2:18047292-18047311 Msa0060370:intron 35.0%
! TCATTTTGGATACACAACAC+TGG - chr1_2:18041028-18041047 Msa0060370:intron 35.0%
! ATTAAAGGCACACATCCAAT+TGG + chr1_2:18047342-18047361 None:intergenic 35.0%
!! TGGATGTGTGCCTTTAATTT+TGG - chr1_2:18047344-18047363 Msa0060370:intron 35.0%
TGGCTATCCTTTATAGCATA+TGG + chr1_2:18047378-18047397 None:intergenic 35.0%
TATGCTATAAAGGATAGCCA+AGG - chr1_2:18047378-18047397 Msa0060370:intron 35.0%
GTTAGGGTATATTTGGATTG+TGG - chr1_2:18047587-18047606 Msa0060370:intron 35.0%
TATAACATTCGTGCTAGATG+TGG - chr1_2:18047736-18047755 Msa0060370:intron 35.0%
GTCTTTGATCAAATCTCTAC+TGG - chr1_2:18047868-18047887 Msa0060370:CDS 35.0%
ATCCTTCCATTCCACTAAAT+AGG - chr1_2:18047902-18047921 Msa0060370:CDS 35.0%
TCCTTCCATTCCACTAAATA+GGG - chr1_2:18047903-18047922 Msa0060370:CDS 35.0%
TTGTAACATGCCCTATTTAG+TGG + chr1_2:18047916-18047935 None:intergenic 35.0%
TTCCCTGCAATCTTCAACTT+TGG - chr1_2:18038865-18038884 Msa0060370:exon 40.0%
CACCAAAGTTGAAGATTGCA+GGG + chr1_2:18038870-18038889 None:intergenic 40.0%
TCACCAAAGTTGAAGATTGC+AGG + chr1_2:18038871-18038890 None:intergenic 40.0%
TGAGTCACCTTCTTATCAAC+TGG + chr1_2:18039592-18039611 None:intergenic 40.0%
GGCAGTACCAAATTAACTCT+TGG - chr1_2:18039899-18039918 Msa0060370:intron 40.0%
GCGCATATCTTGATTCTTTG+GGG - chr1_2:18040047-18040066 Msa0060370:CDS 40.0%
! TTGGGGACCAATTTTTCACA+TGG - chr1_2:18040064-18040083 Msa0060370:CDS 40.0%
TGAGGTATAATACTAGGTGG+GGG + chr1_2:18040124-18040143 None:intergenic 40.0%
CTGAGGTATAATACTAGGTG+GGG + chr1_2:18040125-18040144 None:intergenic 40.0%
CCTGAGGTATAATACTAGGT+GGG + chr1_2:18040126-18040145 None:intergenic 40.0%
CCACCTAGTATTATACCTCA+GGG - chr1_2:18040124-18040143 Msa0060370:CDS 40.0%
ACATGACAATCTGGAGACAA+TGG - chr1_2:18040710-18040729 Msa0060370:intron 40.0%
! CATCACCTAGTTGTTTGTTG+TGG - chr1_2:18041376-18041395 Msa0060370:intron 40.0%
CATAGCCACAACAAACAACT+AGG + chr1_2:18041384-18041403 None:intergenic 40.0%
!! CTAGTTGTTTGTTGTGGCTA+TGG - chr1_2:18041382-18041401 Msa0060370:intron 40.0%
TTGAGTACCATTGACCTCTA+TGG + chr1_2:18041449-18041468 None:intergenic 40.0%
ACCATCTGCAAGAGTGAATT+GGG - chr1_2:18041492-18041511 Msa0060370:intron 40.0%
TCCATCCATTCCCTTGAATA+TGG - chr1_2:18041585-18041604 Msa0060370:intron 40.0%
AGTTGTTGTCCTTGTAAGGT+TGG - chr1_2:18041886-18041905 Msa0060370:intron 40.0%
CTCATTGTTCCAACCTTACA+AGG + chr1_2:18041898-18041917 None:intergenic 40.0%
TGTAAGGTTGGAACAATGAG+AGG - chr1_2:18041898-18041917 Msa0060370:intron 40.0%
AGCAAAATTCAAGGGAAAGC+TGG + chr1_2:18042073-18042092 None:intergenic 40.0%
AAATAGTGAGCAGCCTTCTT+GGG + chr1_2:18042322-18042341 None:intergenic 40.0%
AAAATAGTGAGCAGCCTTCT+TGG + chr1_2:18042323-18042342 None:intergenic 40.0%
TGAGATGGTGTGAGGAATTA+GGG - chr1_2:18042438-18042457 Msa0060370:CDS 40.0%
TGTGAGGAATTAGGGAAGTA+TGG - chr1_2:18042446-18042465 Msa0060370:CDS 40.0%
! AGAACACACGTTTTTGTGGA+CGG + chr1_2:18042586-18042605 None:intergenic 40.0%
TGCGTTAGTTAAGTCATGCA+TGG - chr1_2:18042665-18042684 Msa0060370:intron 40.0%
GTATATTTGGAAGCAGTGCA+GGG - chr1_2:18042739-18042758 Msa0060370:intron 40.0%
GCAAAATTCCTTTCCCTTTG+TGG - chr1_2:18042788-18042807 Msa0060370:intron 40.0%
TCATCATTGGACCATTACTG+CGG + chr1_2:18042827-18042846 None:intergenic 40.0%
AGATTCGTCAAGATGAACGA+TGG + chr1_2:18043090-18043109 None:intergenic 40.0%
TTCCAAAATACCCCCCTAAT+AGG - chr1_2:18043300-18043319 Msa0060370:intron 40.0%
! TTTTGTATGGCCTATTAGGG+GGG + chr1_2:18043313-18043332 None:intergenic 40.0%
TCTTCAGATTACCCCCTAAT+AGG + chr1_2:18043380-18043399 None:intergenic 40.0%
TGTGTTGTCCTTTCTTTCTG+GGG + chr1_2:18043754-18043773 None:intergenic 40.0%
CTGTGTTGTCCTTTCTTTCT+GGG + chr1_2:18043755-18043774 None:intergenic 40.0%
GATACCCAGTCAAACAAGAA+AGG - chr1_2:18043883-18043902 Msa0060370:intron 40.0%
AAATGCTGATACTGGTGGTT+TGG - chr1_2:18044358-18044377 Msa0060370:intron 40.0%
GATCTCTTATCGTAGATGCA+TGG - chr1_2:18044633-18044652 Msa0060370:intron 40.0%
GTGCGTGCAACTATAATCTT+TGG - chr1_2:18045369-18045388 Msa0060370:CDS 40.0%
TCTCTCATTAGGTAGATGCT+CGG + chr1_2:18045462-18045481 None:intergenic 40.0%
! TGAGCTTAACTAAGTTGGCA+TGG + chr1_2:18045641-18045660 None:intergenic 40.0%
CAGAATTTATCTCTCTCCGT+CGG - chr1_2:18046394-18046413 Msa0060370:CDS 40.0%
TGAATTTACGGTATAGCCGA+CGG + chr1_2:18046413-18046432 None:intergenic 40.0%
CTAGGATCAAACTTCACACA+TGG - chr1_2:18046662-18046681 Msa0060370:CDS 40.0%
AATGTTGCAAATACACCTCC+TGG + chr1_2:18046952-18046971 None:intergenic 40.0%
GGTCAAAATGATCTTACTGC+TGG - chr1_2:18047021-18047040 Msa0060370:intron 40.0%
GTTGTGTATCCAAAATGACC+TGG + chr1_2:18047313-18047332 None:intergenic 40.0%
ATACACAACACTGGACCAAT+TGG - chr1_2:18047324-18047343 Msa0060370:intron 40.0%
TGTATTGCTTTGCACAACCT+TGG + chr1_2:18047398-18047417 None:intergenic 40.0%
ACATATGTGATTGCAGCTAG+TGG + chr1_2:18047486-18047505 None:intergenic 40.0%
ACATGCCCTATTTAGTGGAA+TGG + chr1_2:18047911-18047930 None:intergenic 40.0%
ATTTCCACAGACCTAATGGG+AGG - chr1_2:18038959-18038978 Msa0060370:CDS 45.0%
CCCACCTAGTATTATACCTC+AGG - chr1_2:18040123-18040142 Msa0060370:CDS 45.0%
CCCTGAGGTATAATACTAGG+TGG + chr1_2:18040127-18040146 None:intergenic 45.0%
CCACCCTGAGGTATAATACT+AGG + chr1_2:18040130-18040149 None:intergenic 45.0%
CCTAGTATTATACCTCAGGG+TGG - chr1_2:18040127-18040146 Msa0060370:CDS 45.0%
ATTTGCAAGCTTGATGCCCA+AGG - chr1_2:18040322-18040341 Msa0060370:intron 45.0%
! GGTCAAAATGATCTTGGTGC+TGG - chr1_2:18040383-18040402 Msa0060370:intron 45.0%
!!! GATCTTGGTGCTGGCTTTTT+TGG - chr1_2:18040392-18040411 Msa0060370:intron 45.0%
ATACACAACACAGGACCCAT+TGG - chr1_2:18041037-18041056 Msa0060370:intron 45.0%
ATATAAGGGAGGCAGCCAAT+GGG + chr1_2:18041055-18041074 None:intergenic 45.0%
AATATAAGGGAGGCAGCCAA+TGG + chr1_2:18041056-18041075 None:intergenic 45.0%
!! GTTGTTTGTTGTGGCTATGG+AGG - chr1_2:18041385-18041404 Msa0060370:intron 45.0%
! AGCAATAGTGTTGGATGTGG+AGG - chr1_2:18041421-18041440 Msa0060370:intron 45.0%
GACCATCTGCAAGAGTGAAT+TGG - chr1_2:18041491-18041510 Msa0060370:intron 45.0%
TCCCAATTCACTCTTGCAGA+TGG + chr1_2:18041496-18041515 None:intergenic 45.0%
TCTGCAAGAGTGAATTGGGA+TGG - chr1_2:18041496-18041515 Msa0060370:intron 45.0%
GCCATATTCAAGGGAATGGA+TGG + chr1_2:18041589-18041608 None:intergenic 45.0%
GCATGCCATATTCAAGGGAA+TGG + chr1_2:18041593-18041612 None:intergenic 45.0%
CTGTGGCATGCCATATTCAA+GGG + chr1_2:18041598-18041617 None:intergenic 45.0%
TCTGTGGCATGCCATATTCA+AGG + chr1_2:18041599-18041618 None:intergenic 45.0%
AGTTGTTCTGCTGATCAGGT+CGG + chr1_2:18041854-18041873 None:intergenic 45.0%
TGGAAGTTGTTCTGCTGATC+AGG + chr1_2:18041858-18041877 None:intergenic 45.0%
CAGCAGAACAACTTCCAATG+CGG - chr1_2:18041861-18041880 Msa0060370:intron 45.0%
GGTGAGTTGTTGTCCTTGTA+AGG - chr1_2:18041882-18041901 Msa0060370:intron 45.0%
AAGGTTGGAACAATGAGAGG+TGG - chr1_2:18041901-18041920 Msa0060370:intron 45.0%
AAGCACTCCAATGCTGAAGT+TGG - chr1_2:18041933-18041952 Msa0060370:intron 45.0%
! GAGGAGCGGTTATAGTTTGT+TGG - chr1_2:18042022-18042041 Msa0060370:intron 45.0%
GGGTGGAGAGCAAAATTCAA+GGG + chr1_2:18042081-18042100 None:intergenic 45.0%
TGGGTGGAGAGCAAAATTCA+AGG + chr1_2:18042082-18042101 None:intergenic 45.0%
! GCATTTTAGGCATGGTTGCA+GGG + chr1_2:18042121-18042140 None:intergenic 45.0%
! ACCGCAGAAACTTTTTACCG+TGG - chr1_2:18042228-18042247 Msa0060370:intron 45.0%
CCCACGGTAAAAAGTTTCTG+CGG + chr1_2:18042232-18042251 None:intergenic 45.0%
! CCGCAGAAACTTTTTACCGT+GGG - chr1_2:18042229-18042248 Msa0060370:intron 45.0%
AATAGTGAGCAGCCTTCTTG+GGG + chr1_2:18042321-18042340 None:intergenic 45.0%
AGAAATAGAGGGAGAGAGTG+AGG - chr1_2:18042403-18042422 Msa0060370:CDS 45.0%
GTGAGATGGTGTGAGGAATT+AGG - chr1_2:18042437-18042456 Msa0060370:CDS 45.0%
! GGAATTAGGGAAGTATGGAG+AGG - chr1_2:18042451-18042470 Msa0060370:CDS 45.0%
ATAGGTAGAAATGGGAGCCT+AGG - chr1_2:18042479-18042498 Msa0060370:CDS 45.0%
! CGCAAGAACACACGTTTTTG+TGG + chr1_2:18042590-18042609 None:intergenic 45.0%
TGCGTGACTTAACTAACGCA+AGG - chr1_2:18042716-18042735 Msa0060370:intron 45.0%
GCGTGACTTAACTAACGCAA+GGG - chr1_2:18042717-18042736 Msa0060370:intron 45.0%
GGTATATTTGGAAGCAGTGC+AGG - chr1_2:18042738-18042757 Msa0060370:intron 45.0%
! TTTGGCTGTTTAATGGGCCT+TGG - chr1_2:18042848-18042867 Msa0060370:intron 45.0%
CCTGTGTTGTCCTTTCTTTC+TGG + chr1_2:18043756-18043775 None:intergenic 45.0%
CCAGAAAGAAAGGACAACAC+AGG - chr1_2:18043753-18043772 Msa0060370:intron 45.0%
GGTGCTTCAAATGCTGATAC+TGG - chr1_2:18044350-18044369 Msa0060370:intron 45.0%
GCTTCAAATGCTGATACTGG+TGG - chr1_2:18044353-18044372 Msa0060370:intron 45.0%
! TGGCAACTGAAGTGCTTGAA+AGG + chr1_2:18044390-18044409 None:intergenic 45.0%
CAAGCACTTCAGTTGCCAAA+TGG - chr1_2:18044392-18044411 Msa0060370:intron 45.0%
GATGCATGGTGCAACAAACA+TGG - chr1_2:18044647-18044666 Msa0060370:intron 45.0%
!!! TCCTTGTATTTTGGGACGGA+TGG - chr1_2:18045302-18045321 Msa0060370:CDS 45.0%
TCCATCCGTCCCAAAATACA+AGG + chr1_2:18045306-18045325 None:intergenic 45.0%
!! ATGCTCGGTGCAACAATTGT+GGG + chr1_2:18045447-18045466 None:intergenic 45.0%
CGTCGTGAGCTTAACTAAGT+TGG + chr1_2:18045646-18045665 None:intergenic 45.0%
CACGACGACTCTTTCCTAAA+TGG - chr1_2:18045659-18045678 Msa0060370:CDS 45.0%
GTGCAAACTTTGCAACAGCA+GGG - chr1_2:18046684-18046703 Msa0060370:CDS 45.0%
! AATTAGGGGCCAGGTCATTT+TGG - chr1_2:18047301-18047320 Msa0060370:intron 45.0%
ATCCACACGAAGTTGAGCTA+GGG + chr1_2:18047460-18047479 None:intergenic 45.0%
AGGATTTGAGCTACCACATG+TGG - chr1_2:18047684-18047703 Msa0060370:intron 45.0%
GGATGGTACACATTACACAG+AGG - chr1_2:18047831-18047850 Msa0060370:CDS 45.0%
GCCCTATTTAGTGGAATGGA+AGG + chr1_2:18047907-18047926 None:intergenic 45.0%
!!! TGTAATATATTTTTTTTTTT+TGG - chr1_2:18039143-18039162 Msa0060370:intron 5.0%
!! TAATTATAATTCTAAATAAA+AGG - chr1_2:18039964-18039983 Msa0060370:intron 5.0%
!!! ATTAAAAAAAATATTTTACA+GGG + chr1_2:18043256-18043275 None:intergenic 5.0%
!!! AATTAAAAAAAATATTTTAC+AGG + chr1_2:18043257-18043276 None:intergenic 5.0%
!!! ATTTTTTTTTACAAAAATTT+TGG + chr1_2:18043337-18043356 None:intergenic 5.0%
!! TTTATTAATATATATAACAA+GGG + chr1_2:18047249-18047268 None:intergenic 5.0%
!!! TTTTATTAATATATATAACA+AGG + chr1_2:18047250-18047269 None:intergenic 5.0%
GGTGACTCAAACTCAGACAC+TGG - chr1_2:18038886-18038905 Msa0060370:CDS 50.0%
GACTCAAACTCAGACACTGG+TGG - chr1_2:18038889-18038908 Msa0060370:CDS 50.0%
AAACTCAGACACTGGTGGCT+TGG - chr1_2:18038894-18038913 Msa0060370:CDS 50.0%
AGTACCTCCCATTAGGTCTG+TGG + chr1_2:18038966-18038985 None:intergenic 50.0%
! CCATCAGAGTACCTCCCATT+AGG + chr1_2:18038973-18038992 None:intergenic 50.0%
!! CCTAATGGGAGGTACTCTGA+TGG - chr1_2:18038970-18038989 Msa0060370:CDS 50.0%
AAAGGACTGTATCCACCCTG+AGG + chr1_2:18040142-18040161 None:intergenic 50.0%
TGGATGTGGAGGAACCATAG+AGG - chr1_2:18041432-18041451 Msa0060370:intron 50.0%
GGAGGAACCATAGAGGTCAA+TGG - chr1_2:18041439-18041458 Msa0060370:intron 50.0%
AGGACAACAACTCACCGCAT+TGG + chr1_2:18041878-18041897 None:intergenic 50.0%
! TTCAGCATTGGAGTGCTTGC+AGG + chr1_2:18041931-18041950 None:intergenic 50.0%
AGGGAAAGCTGGCAGCAATA+CGG + chr1_2:18042062-18042081 None:intergenic 50.0%
! GGCATTTTAGGCATGGTTGC+AGG + chr1_2:18042122-18042141 None:intergenic 50.0%
!!! AACTAGCGCAGGGGCATTTT+AGG + chr1_2:18042134-18042153 None:intergenic 50.0%
TGCGCAAGTTAACTAGCGCA+GGG + chr1_2:18042144-18042163 None:intergenic 50.0%
TTGCGCAAGTTAACTAGCGC+AGG + chr1_2:18042145-18042164 None:intergenic 50.0%
GGCGTAAGTTAAGTGACGCA+TGG - chr1_2:18042195-18042214 Msa0060370:intron 50.0%
AATAGAGGGAGAGAGTGAGG+AGG - chr1_2:18042406-18042425 Msa0060370:CDS 50.0%
ATAGAGGGAGAGAGTGAGGA+GGG - chr1_2:18042407-18042426 Msa0060370:CDS 50.0%
GGAGAAAGTGAGATGGTGTG+AGG - chr1_2:18042430-18042449 Msa0060370:CDS 50.0%
! ACACACGTTTTTGTGGACGG+TGG + chr1_2:18042583-18042602 None:intergenic 50.0%
TCTTGCGTTAACTCGCGCAT+AGG - chr1_2:18042603-18042622 Msa0060370:intron 50.0%
TGACTTAAGTCACGCACCAC+TGG + chr1_2:18042629-18042648 None:intergenic 50.0%
TGCGTGACTTAAGTCACGCA+TGG - chr1_2:18042633-18042652 Msa0060370:intron 50.0%
TCCTTTCCCTTTGTGGAGAG+TGG - chr1_2:18042795-18042814 Msa0060370:intron 50.0%
CCTTTCCCTTTGTGGAGAGT+GGG - chr1_2:18042796-18042815 Msa0060370:intron 50.0%
CATATGCTTGCAGCAGTCCA+AGG + chr1_2:18042868-18042887 None:intergenic 50.0%
!!! GGCCTATTAGGGGGGTATTT+TGG + chr1_2:18043305-18043324 None:intergenic 50.0%
!! TGCTCGGTGCAACAATTGTG+GGG + chr1_2:18045446-18045465 None:intergenic 50.0%
!! GATGCTCGGTGCAACAATTG+TGG + chr1_2:18045448-18045467 None:intergenic 50.0%
GATGCACGGTGCAACAATTG+TGG + chr1_2:18045500-18045519 None:intergenic 50.0%
GGTGCAAACTTTGCAACAGC+AGG - chr1_2:18046683-18046702 Msa0060370:CDS 50.0%
GATCCACACGAAGTTGAGCT+AGG + chr1_2:18047461-18047480 None:intergenic 50.0%
CTACCACATGTGGCATGTTG+TGG - chr1_2:18047694-18047713 Msa0060370:intron 50.0%
TAGCCACAACATGCCACATG+TGG + chr1_2:18047700-18047719 None:intergenic 50.0%
CATGTGGCATGTTGTGGCTA+TGG - chr1_2:18047700-18047719 Msa0060370:intron 50.0%
!! TGGTGGCGTTGGTGCTTGAA+GGG + chr1_2:18038926-18038945 None:intergenic 55.0%
!! ATGGTGGCGTTGGTGCTTGA+AGG + chr1_2:18038927-18038946 None:intergenic 55.0%
CAAGCACCAACGCCACCATA+TGG - chr1_2:18038928-18038947 Msa0060370:CDS 55.0%
! GTCTCTCCATATGGTGGCGT+TGG + chr1_2:18038937-18038956 None:intergenic 55.0%
CTGGCAGCAATACGGAGCAA+TGG + chr1_2:18042054-18042073 None:intergenic 55.0%
TGCGAGCAAAATGTGCTGGG+TGG + chr1_2:18042098-18042117 None:intergenic 55.0%
GGGTGCGAGCAAAATGTGCT+GGG + chr1_2:18042101-18042120 None:intergenic 55.0%
AGGGTGCGAGCAAAATGTGC+TGG + chr1_2:18042102-18042121 None:intergenic 55.0%
GCGCAAGTTAACTAGCGCAG+GGG + chr1_2:18042143-18042162 None:intergenic 55.0%
TAGAGGGAGAGAGTGAGGAG+GGG - chr1_2:18042408-18042427 Msa0060370:CDS 55.0%
AGGAGGGGGAGAAAGTGAGA+TGG - chr1_2:18042423-18042442 Msa0060370:CDS 55.0%
TTAACTCGCGCATAGGCCAG+TGG - chr1_2:18042610-18042629 Msa0060370:intron 55.0%
CCCACTCTCCACAAAGGGAA+AGG + chr1_2:18042799-18042818 None:intergenic 55.0%
TCACGCCCACTCTCCACAAA+GGG + chr1_2:18042804-18042823 None:intergenic 55.0%
AGCCCTAGCTCAACTTCGTG+TGG - chr1_2:18047455-18047474 Msa0060370:intron 55.0%
GTGGCATGTTGTGGCTATGG+AGG - chr1_2:18047703-18047722 Msa0060370:intron 55.0%
!!! GCGCAGGGGCATTTTAGGCA+TGG + chr1_2:18042129-18042148 None:intergenic 60.0%
AGAGGGAGAGAGTGAGGAGG+GGG - chr1_2:18042409-18042428 Msa0060370:CDS 60.0%
AGGGCGCGAGCAAAATGTGC+TGG - chr1_2:18042758-18042777 Msa0060370:intron 60.0%
GGGCGCGAGCAAAATGTGCT+GGG - chr1_2:18042759-18042778 Msa0060370:intron 60.0%
CGCGAGCAAAATGTGCTGGG+TGG - chr1_2:18042762-18042781 Msa0060370:intron 60.0%
GTCACGCCCACTCTCCACAA+AGG + chr1_2:18042805-18042824 None:intergenic 60.0%
AGTGGGCGTGACCGCAGTAA+TGG - chr1_2:18042813-18042832 Msa0060370:intron 60.0%
GGTGGCTGGGGTTTGAACCC+TGG - chr1_2:18045592-18045611 Msa0060370:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 18038778 18048046 18038778 ID=Msa0060370;Name=Msa0060370
chr1_2 mRNA 18038778 18048046 18038778 ID=Msa0060370-mRNA-1;Parent=Msa0060370;Name=Msa0060370-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.5|0.27|1|0.6|0.63|11|104|692
chr1_2 exon 18038778 18039138 18038778 ID=Msa0060370-mRNA-1:exon:7025;Parent=Msa0060370-mRNA-1
chr1_2 exon 18039269 18039371 18039269 ID=Msa0060370-mRNA-1:exon:7024;Parent=Msa0060370-mRNA-1
chr1_2 exon 18039402 18039533 18039402 ID=Msa0060370-mRNA-1:exon:7023;Parent=Msa0060370-mRNA-1
chr1_2 exon 18039702 18039871 18039702 ID=Msa0060370-mRNA-1:exon:7022;Parent=Msa0060370-mRNA-1
chr1_2 exon 18039997 18040206 18039997 ID=Msa0060370-mRNA-1:exon:7021;Parent=Msa0060370-mRNA-1
chr1_2 exon 18042345 18042571 18042345 ID=Msa0060370-mRNA-1:exon:7020;Parent=Msa0060370-mRNA-1
chr1_2 exon 18045279 18045456 18045279 ID=Msa0060370-mRNA-1:exon:7019;Parent=Msa0060370-mRNA-1
chr1_2 exon 18045556 18045721 18045556 ID=Msa0060370-mRNA-1:exon:7018;Parent=Msa0060370-mRNA-1
chr1_2 exon 18046340 18046527 18046340 ID=Msa0060370-mRNA-1:exon:7017;Parent=Msa0060370-mRNA-1
chr1_2 exon 18046595 18046804 18046595 ID=Msa0060370-mRNA-1:exon:7016;Parent=Msa0060370-mRNA-1
chr1_2 exon 18047809 18048046 18047809 ID=Msa0060370-mRNA-1:exon:7015;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18047809 18048046 18047809 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18046595 18046804 18046595 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18046340 18046527 18046340 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18045556 18045721 18045556 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18045279 18045456 18045279 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18042345 18042571 18042345 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18039997 18040206 18039997 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18039702 18039871 18039702 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18039402 18039533 18039402 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18039269 18039371 18039269 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 CDS 18038882 18039138 18038882 ID=Msa0060370-mRNA-1:cds;Parent=Msa0060370-mRNA-1
chr1_2 three_prime_UTR 18038778 18038881 18038778 ID=Msa0060370-mRNA-1:three_prime_utr;Parent=Msa0060370-mRNA-1
Gene Sequence

>Msa0060370

ATGTTTCATATATCAAGTGTATCATTTTTTGTGGTGTTATCTATAGCTACTACCACAGTGATTGAAAGTAGCAATAGTGAGTGCAATTTCCCTGCAATCTTCAACTTTGGTGACTCAAACTCAGACACTGGTGGCTTGGCTGCTTCCCTTCAAGCACCAACGCCACCATATGGAGAGACTTATTTCCACAGACCTAATGGGAGGTACTCTGATGGCCGTCTAATTGTCGATTTCATTGCTCAAAGTTTTGGACTCCCTTATCTAAGCGCATATCTTGATTCTTTGGGGACCAATTTTTCACATGGTGCAAACTTTGCAACATCAGCATCAACAATTAGACCCCCACCTAGTATTATACCTCAGGGTGGATACAGTCCTTTCTACCTTGATGTCCAATACACTCAATTCAGAGATTTCAAACCTAGAACACAATTCATTAGACAACAAGACATGGTTTACTTTGTAAGAGGATTATTTGCAAGCTTGATGCCCAAGGAAGAGTATTTCTCTAAGGCTTTGTACACATTTGATATTGGTCAAAATGATCTTGGTGCTGGCTTTTTTGGAAACATGACTATACAACAAGTAAATGCTTCTGTGCCAGAGATAATCAATAGTTTCTCCAAAAATATTAAGGATGAAAATGGTTGTGCAAAGCAATATAATGAAGTAGCACAATATTTCAATCATAAGTTGAAGGAAGCTGTCTTTAAACTTCGTGATGATCTTCCTTTAGCTGCAATCACATATGTAGATATCTACTCTGTTAAATATTCCCTTTTTAACAACCCAAAAAAATATGGATTTGAGCATCACCTAGTTGTTTGTTGTGGCTATGGAGGAGAGTATAATTATAGCAATAGTGTTGGATGTGGAGGAACCATAGAGGTCAATGGTACTCAAATTTTTGTAGGTTCATGTGAAAGACCATCTGCAAGAGTGAATTGGGATGGAATTCATTACACTGAAGCAGCTAGCAAGCACATGTCACTTGTGTATTTGATTGTGCTTATTTTATGTTCTACACCCCCAATATTTGCTACAAAGAATTGTGATTTTCCTGCAATATTTAACTTTGGTGCTTCAAATGCTGATACTGGTGGTTTGGCTGCTGCCTTTCAAGCACTTCAGTTGCCAAATGGAGAGACTTTTTTCAATAGATCAACTGGAAGATTTTCTGATGGCCGAATCATTCTTGATTTCATAGCACAAAGCTTTGGACTTCCCTACCTAAGTCCATATCTTAATTCTCTAGGATCAAACTTCACACATGGTGCAAACTTTGCAACAGCAGGGTCAACAATCAAAATTCCTAATAGTATTATACCCAATGGAATGTTTAGTCCATTTTCCCTTCAAATTCAGTACAATCAATTCAAAGATTTCATACCAAAAGCAAAATTCATTAGAGATCAAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTATTCCAAAGCCTTATACACATTTGATATTGGTCAAAATGATCTTACTGCTGGTTTTTTTGGTAATAAGACTATACAACAAGTCAACGATACTATGCCCGATATAGTAAAGAATTTTATAGAGAATATCAAGAATATATACAAATTAGGGGCCAGGTCATTTTGGATACACAACACTGGACCAATTGGATGTGTGCCTTTAATTTTGGCCAATTTTCCATATGCTATAAAGGATAGCCAAGGTTGTGCAAAGCAATACAATGAAGAAGCCCTAGCTCAACTTCGTGTGGATCTTCCACTAGCTGCAATCACATATGTTGATATCTACTCTCCTAAGTACTCTCTTTTCCAAAATCCAAAAAAATACGGATTTGAGCTACCACATGTGGCATGTTGTGGCTATGGAGGAGAGTATAACTATAACATTCGTGCTAGATGTGGAGAAATCATAAACATAAATGGTACAAACATTGTTGTGGGTTCATGTAAAAAACCATCTACTAGAATAATATGGGATGGTACACATTACACAGAGGCAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGGAGCTTTTACAGATCCTTCCATTCCACTAAATAGGGCATGTTACAAAAAGTGA
Protein sequence

>Msa0060370

MFHISSVSFFVVLSIATTTVIESSNSECNFPAIFNFGDSNSDTGGLAASLQAPTPPYGETYFHRPNGRYSDGRLIVDFIAQSFGLPYLSAYLDSLGTNFSHGANFATSASTIRPPPSIIPQGGYSPFYLDVQYTQFRDFKPRTQFIRQQDMVYFVRGLFASLMPKEEYFSKALYTFDIGQNDLGAGFFGNMTIQQVNASVPEIINSFSKNIKDENGCAKQYNEVAQYFNHKLKEAVFKLRDDLPLAAITYVDIYSVKYSLFNNPKKYGFEHHLVVCCGYGGEYNYSNSVGCGGTIEVNGTQIFVGSCERPSARVNWDGIHYTEAASKHMSLVYLIVLILCSTPPIFATKNCDFPAIFNFGASNADTGGLAAAFQALQLPNGETFFNRSTGRFSDGRIILDFIAQSFGLPYLSPYLNSLGSNFTHGANFATAGSTIKIPNSIIPNGMFSPFSLQIQYNQFKDFIPKAKFIRDQGGVFATLIPKEDYYSKALYTFDIGQNDLTAGFFGNKTIQQVNDTMPDIVKNFIENIKNIYKLGARSFWIHNTGPIGCVPLILANFPYAIKDSQGCAKQYNEEALAQLRVDLPLAAITYVDIYSPKYSLFQNPKKYGFELPHVACCGYGGEYNYNIRARCGEIININGTNIVVGSCKKPSTRIIWDGTHYTEAANKIVFDQISTGAFTDPSIPLNRACYKK*