Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794090 | XP_003610780.1 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 1.73e-137 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794090 | sp|Q1G2Y5|LTG21_ARATH | 51.366 | 183 | 79 | 4 | 26 | 208 | 27 | 199 | 7.31e-43 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794090 | G7K519 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 8.27e-138 | 393 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0794090 | 0.812512 | 4.083590e-51 | -8.615850e-47 |
| Msa0004990 | Msa0794090 | 0.805498 | 1.296599e-49 | -8.615850e-47 |
| Msa0011010 | Msa0794090 | 0.824704 | 6.987576e-54 | -8.615850e-47 |
| Msa0011040 | Msa0794090 | 0.826249 | 3.008882e-54 | -8.615850e-47 |
| Msa0021870 | Msa0794090 | 0.806860 | 6.699085e-50 | -8.615850e-47 |
| Msa0024650 | Msa0794090 | 0.823447 | 1.378330e-53 | -8.615850e-47 |
| Msa0025570 | Msa0794090 | 0.804367 | 2.235306e-49 | -8.615850e-47 |
| Msa0028690 | Msa0794090 | 0.814022 | 1.903398e-51 | -8.615850e-47 |
| Msa0031650 | Msa0794090 | 0.819290 | 1.255024e-52 | -8.615850e-47 |
| Msa0038010 | Msa0794090 | 0.804888 | 1.739779e-49 | -8.615850e-47 |
| Msa0048380 | Msa0794090 | 0.829547 | 4.842842e-55 | -8.615850e-47 |
| Msa0053040 | Msa0794090 | 0.807289 | 5.437209e-50 | -8.615850e-47 |
| Msa0072030 | Msa0794090 | 0.802036 | 6.786382e-49 | -8.615850e-47 |
| Msa0073110 | Msa0794090 | 0.813106 | 3.027688e-51 | -8.615850e-47 |
| Msa0077250 | Msa0794090 | 0.801266 | 9.763321e-49 | -8.615850e-47 |
| Msa0085710 | Msa0794090 | 0.816136 | 6.460151e-52 | -8.615850e-47 |
| Msa0093530 | Msa0794090 | 0.834013 | 3.830761e-56 | -8.615850e-47 |
| Msa0098380 | Msa0794090 | 0.815847 | 7.493539e-52 | -8.615850e-47 |
| Msa0120450 | Msa0794090 | 0.809348 | 1.978414e-50 | -8.615850e-47 |
| Msa0616300 | Msa0794090 | 0.812996 | 3.199643e-51 | -8.615850e-47 |
| Msa0628200 | Msa0794090 | 0.834604 | 2.723122e-56 | -8.615850e-47 |
| Msa0629040 | Msa0794090 | 0.806663 | 7.372656e-50 | -8.615850e-47 |
| Msa0643230 | Msa0794090 | 0.828923 | 6.864427e-55 | -8.615850e-47 |
| Msa0652590 | Msa0794090 | 0.804255 | 2.357946e-49 | -8.615850e-47 |
| Msa0655370 | Msa0794090 | 0.806562 | 7.744022e-50 | -8.615850e-47 |
| Msa0658150 | Msa0794090 | 0.849631 | 2.856560e-60 | -8.615850e-47 |
| Msa0667600 | Msa0794090 | 0.801944 | 7.090259e-49 | -8.615850e-47 |
| Msa0672780 | Msa0794090 | 0.826529 | 2.580281e-54 | -8.615850e-47 |
| Msa0675630 | Msa0794090 | 0.809521 | 1.816366e-50 | -8.615850e-47 |
| Msa0680460 | Msa0794090 | 0.827439 | 1.563485e-54 | -8.615850e-47 |
| Msa0682110 | Msa0794090 | 0.801558 | 8.508691e-49 | -8.615850e-47 |
| Msa0685080 | Msa0794090 | 0.812441 | 4.233066e-51 | -8.615850e-47 |
| Msa0689840 | Msa0794090 | 0.803763 | 2.984402e-49 | -8.615850e-47 |
| Msa0703000 | Msa0794090 | 0.850409 | 1.729729e-60 | -8.615850e-47 |
| Msa0709790 | Msa0794090 | 0.823811 | 1.132721e-53 | -8.615850e-47 |
| Msa0716980 | Msa0794090 | 0.810928 | 9.029172e-51 | -8.615850e-47 |
| Msa0720810 | Msa0794090 | 0.808174 | 3.525310e-50 | -8.615850e-47 |
| Msa0730890 | Msa0794090 | 0.868679 | 5.458186e-66 | -8.615850e-47 |
| Msa0734080 | Msa0794090 | 0.812134 | 4.938922e-51 | -8.615850e-47 |
| Msa0734100 | Msa0794090 | 0.824721 | 6.921684e-54 | -8.615850e-47 |
| Msa0738570 | Msa0794090 | 0.834862 | 2.345073e-56 | -8.615850e-47 |
| Msa0743370 | Msa0794090 | 0.809065 | 2.274650e-50 | -8.615850e-47 |
| Msa0747710 | Msa0794090 | 0.815442 | 9.224834e-52 | -8.615850e-47 |
| Msa0750790 | Msa0794090 | 0.816826 | 4.527492e-52 | -8.615850e-47 |
| Msa0773030 | Msa0794090 | 0.871425 | 6.903116e-67 | -8.615850e-47 |
| Msa0775350 | Msa0794090 | 0.836819 | 7.484049e-57 | -8.615850e-47 |
| Msa0776340 | Msa0794090 | 0.843470 | 1.373882e-58 | -8.615850e-47 |
| Msa0777210 | Msa0794090 | 0.801401 | 9.163831e-49 | -8.615850e-47 |
| Msa0783580 | Msa0794090 | 0.830768 | 2.437790e-55 | -8.615850e-47 |
| Msa0792410 | Msa0794090 | 0.814844 | 1.252785e-51 | -8.615850e-47 |
| Msa0794090 | Msa0794100 | 0.893714 | 4.859674e-75 | -8.615850e-47 |
| Msa0794090 | Msa0795320 | 0.834414 | 3.039803e-56 | -8.615850e-47 |
| Msa0794090 | Msa0798840 | 0.830918 | 2.240432e-55 | -8.615850e-47 |
| Msa0794090 | Msa0803880 | 0.802945 | 4.408760e-49 | -8.615850e-47 |
| Msa0794090 | Msa0810330 | 0.809372 | 1.955133e-50 | -8.615850e-47 |
| Msa0794090 | Msa0812720 | 0.838100 | 3.513822e-57 | -8.615850e-47 |
| Msa0794090 | Msa0813840 | 0.845100 | 5.013289e-59 | -8.615850e-47 |
| Msa0794090 | Msa0814660 | 0.827279 | 1.707893e-54 | -8.615850e-47 |
| Msa0794090 | Msa0817100 | 0.801491 | 8.781847e-49 | -8.615850e-47 |
| Msa0794090 | Msa0819110 | 0.831912 | 1.275469e-55 | -8.615850e-47 |
| Msa0794090 | Msa0831310 | 0.880191 | 6.723943e-70 | -8.615850e-47 |
| Msa0794090 | Msa0831320 | 0.962693 | 3.504656e-121 | -8.615850e-47 |
| Msa0794090 | Msa0841930 | 0.804004 | 2.659643e-49 | -8.615850e-47 |
| Msa0794090 | Msa0847140 | 0.808890 | 2.479357e-50 | -8.615850e-47 |
| Msa0794090 | Msa0850640 | 0.818556 | 1.843448e-52 | -8.615850e-47 |
| Msa0794090 | Msa0853080 | 0.841428 | 4.779883e-58 | -8.615850e-47 |
| Msa0794090 | Msa0854380 | 0.854818 | 9.552297e-62 | -8.615850e-47 |
| Msa0794090 | Msa0859230 | 0.817354 | 3.445242e-52 | -8.615850e-47 |
| Msa0794090 | Msa0873880 | 0.804569 | 2.028109e-49 | -8.615850e-47 |
| Msa0794090 | Msa0890210 | 0.814251 | 1.694646e-51 | -8.615850e-47 |
| Msa0794090 | Msa0896920 | 0.841250 | 5.324731e-58 | -8.615850e-47 |
| Msa0794090 | Msa0896950 | 0.800253 | 1.572091e-48 | -8.615850e-47 |
| Msa0794090 | Msa0902340 | 0.808697 | 2.726714e-50 | -8.615850e-47 |
| Msa0794090 | Msa0910560 | 0.813049 | 3.115905e-51 | -8.615850e-47 |
| Msa0794090 | Msa0910590 | 0.830456 | 2.906929e-55 | -8.615850e-47 |
| Msa0794090 | Msa0932930 | 0.808612 | 2.842792e-50 | -8.615850e-47 |
| Msa0794090 | Msa0948430 | 0.828926 | 6.851802e-55 | -8.615850e-47 |
| Msa0794090 | Msa0950090 | 0.834001 | 3.857483e-56 | -8.615850e-47 |
| Msa0794090 | Msa0962290 | 0.807612 | 4.643274e-50 | -8.615850e-47 |
| Msa0794090 | Msa0964510 | 0.807286 | 5.444728e-50 | -8.615850e-47 |
| Msa0794090 | Msa0970790 | 0.804070 | 2.576408e-49 | -8.615850e-47 |
| Msa0794090 | Msa0975950 | 0.800028 | 1.746305e-48 | -8.615850e-47 |
| Msa0794090 | Msa0985380 | 0.825975 | 3.495466e-54 | -8.615850e-47 |
| Msa0794090 | Msa0987020 | 0.812503 | 4.103815e-51 | -8.615850e-47 |
| Msa0794090 | Msa0996980 | 0.815088 | 1.105798e-51 | -8.615850e-47 |
| Msa0794090 | Msa1024420 | 0.816967 | 4.207393e-52 | -8.615850e-47 |
| Msa0794090 | Msa1024480 | 0.816406 | 5.622778e-52 | -8.615850e-47 |
| Msa0794090 | Msa1029860 | 0.828157 | 1.051081e-54 | -8.615850e-47 |
| Msa0794090 | Msa1035050 | 0.809941 | 1.475377e-50 | -8.615850e-47 |
| Msa0794090 | Msa1035880 | 0.803463 | 3.445254e-49 | -8.615850e-47 |
| Msa0794090 | Msa1040330 | 0.839522 | 1.506530e-57 | -8.615850e-47 |
| Msa0794090 | Msa1049400 | 0.804432 | 2.166511e-49 | -8.615850e-47 |
| Msa0794090 | Msa1061670 | 0.801996 | 6.917589e-49 | -8.615850e-47 |
| Msa0794090 | Msa1063260 | 0.809822 | 1.565014e-50 | -8.615850e-47 |
| Msa0794090 | Msa1075030 | 0.823143 | 1.623330e-53 | -8.615850e-47 |
| Msa0794090 | Msa1083100 | 0.821066 | 4.920478e-53 | -8.615850e-47 |
| Msa0794090 | Msa1087200 | 0.935550 | 7.105951e-97 | -8.615850e-47 |
| Msa0794090 | Msa1087210 | 0.896832 | 2.525610e-76 | -8.615850e-47 |
| Msa0794090 | Msa1099640 | 0.812175 | 4.838877e-51 | -8.615850e-47 |
| Msa0794090 | Msa1107520 | 0.803976 | 2.695141e-49 | -8.615850e-47 |
| Msa0794090 | Msa1115900 | 0.817682 | 2.905040e-52 | -8.615850e-47 |
| Msa0794090 | Msa1120960 | 0.800365 | 1.491158e-48 | -8.615850e-47 |
| Msa0794090 | Msa1127940 | 0.812327 | 4.483466e-51 | -8.615850e-47 |
| Msa0794090 | Msa1136630 | 0.826170 | 3.142910e-54 | -8.615850e-47 |
| Msa0794090 | Msa1136690 | 0.816406 | 5.623002e-52 | -8.615850e-47 |
| Msa0794090 | Msa1143250 | 0.834811 | 2.414999e-56 | -8.615850e-47 |
| Msa0794090 | Msa1152330 | 0.803035 | 4.223443e-49 | -8.615850e-47 |
| Msa0794090 | Msa1160540 | 0.828637 | 8.050235e-55 | -8.615850e-47 |
| Msa0794090 | Msa1162370 | 0.811488 | 6.828219e-51 | -8.615850e-47 |
| Msa0794090 | Msa1163300 | 0.803180 | 3.943190e-49 | -8.615850e-47 |
| Msa0794090 | Msa1165670 | 0.805110 | 1.563695e-49 | -8.615850e-47 |
| Msa0794090 | Msa1165860 | 0.820137 | 8.041538e-53 | -8.615850e-47 |
| Msa0794090 | Msa1179190 | 0.814614 | 1.408372e-51 | -8.615850e-47 |
| Msa0794090 | Msa1187750 | 0.840872 | 6.693195e-58 | -8.615850e-47 |
| Msa0794090 | Msa1191270 | 0.803233 | 3.844062e-49 | -8.615850e-47 |
| Msa0794090 | Msa1202110 | 0.805641 | 1.210365e-49 | -8.615850e-47 |
| Msa0794090 | Msa1206330 | 0.809275 | 2.050669e-50 | -8.615850e-47 |
| Msa0794090 | Msa1206380 | 0.805339 | 1.400423e-49 | -8.615850e-47 |
| Msa0794090 | Msa1208050 | 0.815499 | 8.958013e-52 | -8.615850e-47 |
| Msa0794090 | Msa1208140 | 0.813936 | 1.988339e-51 | -8.615850e-47 |
| Msa0794090 | Msa1211940 | 0.834617 | 2.702247e-56 | -8.615850e-47 |
| Msa0794090 | Msa1212080 | 0.827007 | 1.983926e-54 | -8.615850e-47 |
| Msa0794090 | Msa1220390 | -0.802834 | 4.649113e-49 | -8.615850e-47 |
| Msa0794090 | Msa1223990 | 0.816898 | 4.360169e-52 | -8.615850e-47 |
| Msa0794090 | Msa1233620 | 0.823156 | 1.612259e-53 | -8.615850e-47 |
| Msa0794090 | Msa1241960 | 0.800201 | 1.610327e-48 | -8.615850e-47 |
| Msa0794090 | Msa1254870 | 0.806660 | 7.386455e-50 | -8.615850e-47 |
| Msa0794090 | Msa1263110 | 0.828980 | 6.647072e-55 | -8.615850e-47 |
| Msa0794090 | Msa1263120 | 0.811567 | 6.562751e-51 | -8.615850e-47 |
| Msa0794090 | Msa1263370 | 0.816411 | 5.606663e-52 | -8.615850e-47 |
| Msa0794090 | Msa1269200 | 0.825819 | 3.806436e-54 | -8.615850e-47 |
| Msa0794090 | Msa1269500 | 0.813722 | 2.216853e-51 | -8.615850e-47 |
| Msa0794090 | Msa1273320 | 0.812575 | 3.957897e-51 | -8.615850e-47 |
| Msa0794090 | Msa1275840 | 0.812490 | 4.129347e-51 | -8.615850e-47 |
| Msa0794090 | Msa1281780 | 0.804883 | 1.744372e-49 | -8.615850e-47 |
| Msa0794090 | Msa1284020 | 0.821722 | 3.471104e-53 | -8.615850e-47 |
| Msa0794090 | Msa1296490 | 0.814067 | 1.860376e-51 | -8.615850e-47 |
| Msa0794090 | Msa1314020 | 0.815518 | 8.874257e-52 | -8.615850e-47 |
| Msa0794090 | Msa1314050 | 0.800188 | 1.620007e-48 | -8.615850e-47 |
| Msa0794090 | Msa1321010 | 0.809210 | 2.117193e-50 | -8.615850e-47 |
| Msa0794090 | Msa1322380 | 0.823452 | 1.374362e-53 | -8.615850e-47 |
| Msa0794090 | Msa1323120 | 0.800466 | 1.422684e-48 | -8.615850e-47 |
| Msa0794090 | Msa1328430 | 0.806707 | 7.216248e-50 | -8.615850e-47 |
| Msa0794090 | Msa1344450 | 0.835176 | 1.953758e-56 | -8.615850e-47 |
| Msa0794090 | Msa1344930 | 0.818570 | 1.829271e-52 | -8.615850e-47 |
| Msa0794090 | Msa1349420 | 0.811689 | 6.175894e-51 | -8.615850e-47 |
| Msa0794090 | Msa1362520 | 0.806696 | 7.256491e-50 | -8.615850e-47 |
| Msa0794090 | Msa1362590 | 0.804649 | 1.952183e-49 | -8.615850e-47 |
| Msa0794090 | Msa1365230 | 0.803757 | 2.993633e-49 | -8.615850e-47 |
| Msa0794090 | Msa1375640 | 0.811530 | 6.687462e-51 | -8.615850e-47 |
| Msa0794090 | Msa1376520 | 0.823345 | 1.456254e-53 | -8.615850e-47 |
| Msa0794090 | Msa1376880 | 0.850024 | 2.218163e-60 | -8.615850e-47 |
| Msa0794090 | Msa1378950 | 0.801624 | 8.248228e-49 | -8.615850e-47 |
| Msa0794090 | Msa1384130 | 0.856410 | 3.278732e-62 | -8.615850e-47 |
| Msa0794090 | Msa1390040 | 0.819051 | 1.422832e-52 | -8.615850e-47 |
| Msa0794090 | Msa1395080 | 0.850552 | 1.577639e-60 | -8.615850e-47 |
| Msa0794090 | Msa1398120 | 0.826732 | 2.308813e-54 | -8.615850e-47 |
| Msa0794090 | Msa1407810 | 0.818481 | 1.917132e-52 | -8.615850e-47 |
| Msa0794090 | Msa1409600 | 0.808693 | 2.732067e-50 | -8.615850e-47 |
| Msa0794090 | Msa1417220 | 0.827001 | 1.991036e-54 | -8.615850e-47 |
| Msa0794090 | Msa1429190 | 0.809406 | 1.921870e-50 | -8.615850e-47 |
| Msa0794090 | Msa1437780 | 0.819215 | 1.305334e-52 | -8.615850e-47 |
| Msa0794090 | Msa1459610 | 0.804328 | 2.277034e-49 | -8.615850e-47 |
| Msa0794090 | Msa1462610 | 0.817234 | 3.665357e-52 | -8.615850e-47 |
| Msa0794090 | Msa1463820 | 0.897752 | 1.036022e-76 | -8.615850e-47 |
| Msa0794090 | Msa1464140 | 0.893055 | 8.973053e-75 | -8.615850e-47 |
| Msa0121320 | Msa0794090 | 0.811860 | 5.666072e-51 | -8.615850e-47 |
| Msa0126960 | Msa0794090 | 0.836044 | 1.178355e-56 | -8.615850e-47 |
| Msa0143950 | Msa0794090 | 0.825988 | 3.470767e-54 | -8.615850e-47 |
| Msa0144000 | Msa0794090 | 0.809985 | 1.443522e-50 | -8.615850e-47 |
| Msa0163340 | Msa0794090 | 0.800511 | 1.392424e-48 | -8.615850e-47 |
| Msa0163690 | Msa0794090 | 0.819179 | 1.330715e-52 | -8.615850e-47 |
| Msa0168750 | Msa0794090 | 0.812706 | 3.703627e-51 | -8.615850e-47 |
| Msa0171740 | Msa0794090 | 0.822086 | 2.859628e-53 | -8.615850e-47 |
| Msa0189990 | Msa0794090 | 0.840738 | 7.257187e-58 | -8.615850e-47 |
| Msa0199440 | Msa0794090 | 0.833426 | 5.369996e-56 | -8.615850e-47 |
| Msa0203880 | Msa0794090 | 0.804108 | 2.530040e-49 | -8.615850e-47 |
| Msa0219810 | Msa0794090 | 0.813099 | 3.037815e-51 | -8.615850e-47 |
| Msa0225920 | Msa0794090 | 0.807905 | 4.023209e-50 | -8.615850e-47 |
| Msa0230920 | Msa0794090 | 0.801212 | 1.001799e-48 | -8.615850e-47 |
| Msa0234130 | Msa0794090 | 0.805127 | 1.550738e-49 | -8.615850e-47 |
| Msa0238330 | Msa0794090 | 0.800626 | 1.319605e-48 | -8.615850e-47 |
| Msa0401500 | Msa0794090 | 0.800975 | 1.119826e-48 | -8.615850e-47 |
| Msa0412560 | Msa0794090 | 0.815909 | 7.260249e-52 | -8.615850e-47 |
| Msa0414480 | Msa0794090 | 0.823341 | 1.459591e-53 | -8.615850e-47 |
| Msa0415010 | Msa0794090 | 0.818835 | 1.593376e-52 | -8.615850e-47 |
| Msa0418230 | Msa0794090 | 0.834551 | 2.808375e-56 | -8.615850e-47 |
| Msa0425950 | Msa0794090 | 0.805134 | 1.545348e-49 | -8.615850e-47 |
| Msa0426030 | Msa0794090 | 0.805058 | 1.603356e-49 | -8.615850e-47 |
| Msa0434910 | Msa0794090 | 0.835693 | 1.446627e-56 | -8.615850e-47 |
| Msa0445530 | Msa0794090 | 0.800268 | 1.560721e-48 | -8.615850e-47 |
| Msa0448230 | Msa0794090 | 0.806966 | 6.362492e-50 | -8.615850e-47 |
| Msa0459930 | Msa0794090 | 0.824604 | 7.375042e-54 | -8.615850e-47 |
| Msa0464620 | Msa0794090 | 0.853088 | 3.010263e-61 | -8.615850e-47 |
| Msa0469770 | Msa0794090 | -0.803200 | 3.905801e-49 | -8.615850e-47 |
| Msa0472390 | Msa0794090 | 0.807186 | 5.716154e-50 | -8.615850e-47 |
| Msa0244310 | Msa0794090 | 0.818924 | 1.520914e-52 | -8.615850e-47 |
| Msa0245660 | Msa0794090 | 0.802784 | 4.760169e-49 | -8.615850e-47 |
| Msa0247780 | Msa0794090 | 0.857666 | 1.397283e-62 | -8.615850e-47 |
| Msa0248320 | Msa0794090 | 0.816076 | 6.663071e-52 | -8.615850e-47 |
| Msa0280160 | Msa0794090 | 0.844328 | 8.090188e-59 | -8.615850e-47 |
| Msa0307630 | Msa0794090 | 0.816037 | 6.797267e-52 | -8.615850e-47 |
| Msa0320140 | Msa0794090 | 0.801892 | 7.265330e-49 | -8.615850e-47 |
| Msa0325260 | Msa0794090 | 0.850524 | 1.606438e-60 | -8.615850e-47 |
| Msa0331190 | Msa0794090 | 0.837070 | 6.457762e-57 | -8.615850e-47 |
| Msa0333770 | Msa0794090 | 0.815647 | 8.306634e-52 | -8.615850e-47 |
| Msa0351890 | Msa0794090 | 0.804871 | 1.754065e-49 | -8.615850e-47 |
| Msa0356250 | Msa0794090 | 0.807400 | 5.149660e-50 | -8.615850e-47 |
| Msa0356270 | Msa0794090 | 0.810405 | 1.171437e-50 | -8.615850e-47 |
| Msa0357510 | Msa0794090 | 0.804145 | 2.485627e-49 | -8.615850e-47 |
| Msa0487110 | Msa0794090 | 0.817587 | 3.051534e-52 | -8.615850e-47 |
| Msa0501080 | Msa0794090 | 0.803716 | 3.052573e-49 | -8.615850e-47 |
| Msa0510050 | Msa0794090 | 0.851736 | 7.310170e-61 | -8.615850e-47 |
| Msa0531030 | Msa0794090 | 0.802137 | 6.471524e-49 | -8.615850e-47 |
| Msa0531040 | Msa0794090 | 0.813273 | 2.782520e-51 | -8.615850e-47 |
| Msa0531050 | Msa0794090 | 0.808792 | 2.602015e-50 | -8.615850e-47 |
| Msa0531080 | Msa0794090 | 0.816176 | 6.327542e-52 | -8.615850e-47 |
| Msa0538650 | Msa0794090 | 0.819472 | 1.140594e-52 | -8.615850e-47 |
| Msa0540640 | Msa0794090 | 0.814784 | 1.291443e-51 | -8.615850e-47 |
| Msa0547370 | Msa0794090 | 0.812258 | 4.641015e-51 | -8.615850e-47 |
| Msa0548790 | Msa0794090 | 0.807475 | 4.965053e-50 | -8.615850e-47 |
| Msa0554660 | Msa0794090 | 0.805442 | 1.332455e-49 | -8.615850e-47 |
| Msa0561830 | Msa0794090 | 0.808064 | 3.721002e-50 | -8.615850e-47 |
| Msa0566490 | Msa0794090 | 0.843379 | 1.452922e-58 | -8.615850e-47 |
| Msa0567330 | Msa0794090 | 0.808769 | 2.631373e-50 | -8.615850e-47 |
| Msa0567570 | Msa0794090 | 0.823661 | 1.228559e-53 | -8.615850e-47 |
| Msa0568920 | Msa0794090 | 0.804831 | 1.788128e-49 | -8.615850e-47 |
| Msa0576320 | Msa0794090 | 0.815061 | 1.121082e-51 | -8.615850e-47 |
| Msa0587920 | Msa0794090 | 0.812027 | 5.211053e-51 | -8.615850e-47 |
| Msa0587930 | Msa0794090 | 0.835568 | 1.555533e-56 | -8.615850e-47 |
| Msa0588040 | Msa0794090 | 0.814926 | 1.201512e-51 | -8.615850e-47 |
| Msa0594470 | Msa0794090 | 0.862631 | 4.419504e-64 | -8.615850e-47 |
| Msa0597800 | Msa0794090 | 0.803399 | 3.551807e-49 | -8.615850e-47 |
| Msa0597820 | Msa0794090 | 0.800979 | 1.117781e-48 | -8.615850e-47 |
| Msa0602100 | Msa0794090 | 0.819300 | 1.248378e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794090 | MtrunA17_Chr5g0394991 | 96.226 | 212 | 8 | 0 | 1 | 212 | 1 | 212 | 1.59e-141 | 393 |
| Msa0794090 | MtrunA17_Chr1g0205171 | 52.727 | 220 | 93 | 5 | 1 | 212 | 1 | 217 | 3.28e-63 | 195 |
| Msa0794090 | MtrunA17_Chr1g0185311 | 44.375 | 160 | 78 | 7 | 1 | 156 | 1 | 153 | 1.83e-32 | 116 |
| Msa0794090 | MtrunA17_Chr7g0260071 | 41.096 | 146 | 70 | 5 | 8 | 147 | 7 | 142 | 5.26e-17 | 76.3 |
| Msa0794090 | MtrunA17_Chr5g0395001 | 35.433 | 127 | 71 | 6 | 1 | 125 | 1 | 118 | 6.29e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794090 | AT1G05450.2 | 51.366 | 183 | 79 | 4 | 26 | 208 | 27 | 199 | 7.43e-44 | 146 |
| Msa0794090 | AT3G22620.1 | 43.750 | 208 | 103 | 6 | 10 | 212 | 5 | 203 | 8.98e-39 | 133 |
| Msa0794090 | AT2G48140.1 | 41.667 | 204 | 103 | 7 | 12 | 210 | 7 | 199 | 1.55e-34 | 122 |
| Msa0794090 | AT2G48140.2 | 53.913 | 115 | 47 | 3 | 12 | 123 | 7 | 118 | 2.02e-33 | 117 |
| Msa0794090 | AT3G22600.1 | 35.766 | 137 | 71 | 6 | 1 | 129 | 1 | 128 | 6.03e-13 | 64.7 |
| Msa0794090 | AT2G48130.2 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0794090 | AT2G48130.6 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0794090 | AT2G48130.4 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0794090 | AT2G48130.5 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0794090 | AT2G48130.1 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
| Msa0794090 | AT2G48130.3 | 34.694 | 147 | 83 | 7 | 4 | 145 | 3 | 141 | 3.55e-12 | 63.2 |
Find 78 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGTTTGGACCCATAT+TGG | 0.216171 | 5_3:-5891708 | Msa0794090:three_prime_UTR |
| TTGACAGGACCGGCGTCTTT+CGG | 0.267890 | 5_3:-5892312 | Msa0794090:intron |
| AAACCAATACCACCCCAATA+TGG | 0.274848 | 5_3:+5891694 | None:intergenic |
| GACCCATATTGGGGTGGTAT+TGG | 0.297176 | 5_3:-5891697 | Msa0794090:three_prime_UTR |
| AAATTGTTTGGACCCATATT+GGG | 0.299454 | 5_3:-5891707 | Msa0794090:three_prime_UTR |
| CACAACAATACAAATGTCTT+TGG | 0.304309 | 5_3:+5891668 | None:intergenic |
| CAGATCAGAGCGGCCACTTC+CGG | 0.318856 | 5_3:+5891878 | None:intergenic |
| TAGTCTCCTACTATCTGTTT+TGG | 0.329233 | 5_3:-5891746 | Msa0794090:three_prime_UTR |
| TAGTCTCCTACTATCTGTTT+TGG | 0.329233 | 5_3:-5891826 | Msa0794090:CDS |
| TTAAAACACTACTAGGTTAC+TGG | 0.335706 | 5_3:-5891786 | Msa0794090:exon |
| ATGTTTATGTTATAGAGTTT+TGG | 0.356717 | 5_3:+5892910 | None:intergenic |
| CTCTATAACATAAACATAGA+TGG | 0.357921 | 5_3:-5892904 | Msa0794090:exon |
| GGCGTTGCAGATGGAATATC+AGG | 0.363139 | 5_3:+5891900 | None:intergenic |
| GGGTTCGCTGATGGAGATAA+TGG | 0.387464 | 5_3:+5891921 | None:intergenic |
| ATAGCTAAGGTTCTATTGAT+TGG | 0.389392 | 5_3:+5892618 | None:intergenic |
| TTCTATATTAAAACACTACT+AGG | 0.400865 | 5_3:-5891793 | Msa0794090:exon |
| GGCTCACCGCTTCCTGCTCC+AGG | 0.422121 | 5_3:-5892420 | Msa0794090:intron |
| GATCTGACTCCATCATCTGC+TGG | 0.433930 | 5_3:-5891861 | Msa0794090:CDS |
| GAAACTCAAGCAAGGGCTAA+TGG | 0.441100 | 5_3:+5892767 | None:intergenic |
| CCTCGTGCTTGTAACTTGCC+TGG | 0.444455 | 5_3:-5892588 | Msa0794090:CDS |
| AACCAATACCACCCCAATAT+GGG | 0.447031 | 5_3:+5891695 | None:intergenic |
| CCACTTCCGGGCGTTGCAGA+TGG | 0.451493 | 5_3:+5891891 | None:intergenic |
| CTATTGATTGGTAATGCAAA+AGG | 0.452479 | 5_3:+5892630 | None:intergenic |
| GTTAGCCGTGGCTTCGATCA+TGG | 0.462490 | 5_3:-5892847 | Msa0794090:CDS |
| CTAAGAGATGGTGTCAATGC+AGG | 0.465399 | 5_3:+5892276 | None:intergenic |
| CTTACCATTGATATGTTACA+TGG | 0.470781 | 5_3:+5892795 | None:intergenic |
| CAATGACCAAAACAGATAGT+AGG | 0.505531 | 5_3:+5891820 | None:intergenic |
| GATAATGGATTGGTTGTCTC+AGG | 0.511804 | 5_3:+5891936 | None:intergenic |
| TTTGTTGTGTTTAAGAGTGA+AGG | 0.513809 | 5_3:+5892956 | None:intergenic |
| ATCCTTGCTTCCACTTGTGA+GGG | 0.516520 | 5_3:+5892683 | None:intergenic |
| CCATCTGCAACGCCCGGAAG+TGG | 0.516819 | 5_3:-5891891 | Msa0794090:CDS |
| CAATGACCAAAACAGATAGT+AGG | 0.517949 | 5_3:+5891740 | None:intergenic |
| GATGATGATCCAGCAGATGA+TGG | 0.519019 | 5_3:+5891852 | None:intergenic |
| AATCCTTGCTTCCACTTGTG+AGG | 0.527769 | 5_3:+5892682 | None:intergenic |
| GGAATATCAGGGTTCGCTGA+TGG | 0.537454 | 5_3:+5891912 | None:intergenic |
| AGAGAAGGTGTCACTGGTGA+GGG | 0.537488 | 5_3:+5891969 | None:intergenic |
| CCACGGCTAACACCACAGTT+AGG | 0.542248 | 5_3:+5892859 | None:intergenic |
| CGCTGATGGAGATAATGGAT+TGG | 0.542515 | 5_3:+5891926 | None:intergenic |
| GATATTCCATCTGCAACGCC+CGG | 0.544541 | 5_3:-5891897 | Msa0794090:CDS |
| CTCACAAATAGTAGTGGCAA+TGG | 0.545441 | 5_3:-5892744 | Msa0794090:CDS |
| CGTCGCGGTTTACCTGGAGC+AGG | 0.545706 | 5_3:+5892408 | None:intergenic |
| TAAGAGATGGTGTCAATGCA+GGG | 0.547995 | 5_3:+5892277 | None:intergenic |
| GACCCTCACAAGTGGAAGCA+AGG | 0.549047 | 5_3:-5892685 | Msa0794090:CDS |
| CATTGCCACTACTATTTGTG+AGG | 0.549899 | 5_3:+5892745 | None:intergenic |
| GTCGTGATTTGAGCGTAGGC+TGG | 0.551456 | 5_3:+5892819 | None:intergenic |
| TGTATGTGTCTTATTGCCAC+TGG | 0.565408 | 5_3:-5892660 | Msa0794090:CDS |
| GGATTGGTTGTCTCAGGCTG+TGG | 0.565431 | 5_3:+5891942 | None:intergenic |
| GGTTTACCTGGAGCAGGAAG+CGG | 0.566105 | 5_3:+5892414 | None:intergenic |
| GACGCCATGTAACATATCAA+TGG | 0.568392 | 5_3:-5892799 | Msa0794090:CDS |
| AATTGTTTGGACCCATATTG+GGG | 0.569765 | 5_3:-5891706 | Msa0794090:three_prime_UTR |
| TTGCATTGAAGTGGAACACC+AGG | 0.570114 | 5_3:+5892570 | None:intergenic |
| ACACCATCTCTTAGTCCTCA+AGG | 0.573546 | 5_3:-5892267 | Msa0794090:intron |
| GCAGCAATCAGCAGTGGGTG+AGG | 0.573593 | 5_3:+5892719 | None:intergenic |
| TGGCGTCGTGATTTGAGCGT+AGG | 0.576088 | 5_3:+5892815 | None:intergenic |
| GCAATCAAGACCCTCACAAG+TGG | 0.578959 | 5_3:-5892693 | Msa0794090:CDS |
| CAGAGAAGGTGTCACTGGTG+AGG | 0.580166 | 5_3:+5891968 | None:intergenic |
| GTATTGTTGTGTATTATGTG+TGG | 0.581727 | 5_3:-5891656 | Msa0794090:three_prime_UTR |
| AGTTTCCTCACAAATAGTAG+TGG | 0.606601 | 5_3:-5892750 | Msa0794090:CDS |
| TGCAGCCATGATCGAAGCCA+CGG | 0.611380 | 5_3:+5892842 | None:intergenic |
| GTCAATGCAGGGGAAAGAGA+TGG | 0.612748 | 5_3:+5892288 | None:intergenic |
| CCTAACTGTGGTGTTAGCCG+TGG | 0.613375 | 5_3:-5892859 | Msa0794090:CDS |
| GGTGACAGAGAAGGTGTCAC+TGG | 0.619445 | 5_3:+5891963 | None:intergenic |
| AGAGATGGCCCGAAAGACGC+CGG | 0.622383 | 5_3:+5892303 | None:intergenic |
| TGTTTGGACCCATATTGGGG+TGG | 0.623606 | 5_3:-5891703 | Msa0794090:three_prime_UTR |
| TTGTGAGGAAACTCAAGCAA+GGG | 0.634401 | 5_3:+5892760 | None:intergenic |
| ACGAGGAAGAGAGATAGCTA+AGG | 0.635982 | 5_3:+5892605 | None:intergenic |
| GTACCTTGAGGACTAAGAGA+TGG | 0.638083 | 5_3:+5892264 | None:intergenic |
| GCATTGCAGCAATCAGCAGT+GGG | 0.640694 | 5_3:+5892714 | None:intergenic |
| TTTGTGAGGAAACTCAAGCA+AGG | 0.643831 | 5_3:+5892759 | None:intergenic |
| GTCTCTCTACCGCCTAACTG+TGG | 0.648382 | 5_3:-5892871 | Msa0794090:CDS |
| TCAGGCTGTGGTGACAGAGA+AGG | 0.649180 | 5_3:+5891954 | None:intergenic |
| TGCATTGCAGCAATCAGCAG+TGG | 0.654060 | 5_3:+5892713 | None:intergenic |
| AAGAGATGGTGTCAATGCAG+GGG | 0.669299 | 5_3:+5892278 | None:intergenic |
| GCGTTGCAGATGGAATATCA+GGG | 0.683696 | 5_3:+5891901 | None:intergenic |
| CCAGGCAAGTTACAAGCACG+AGG | 0.683819 | 5_3:+5892588 | None:intergenic |
| TGCAAAAGGAACATTGCCAG+TGG | 0.683851 | 5_3:+5892644 | None:intergenic |
| CGGCTAACACCACAGTTAGG+CGG | 0.689758 | 5_3:+5892862 | None:intergenic |
| ATGATGGAGTCAGATCAGAG+CGG | 0.809779 | 5_3:+5891868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAATAATAGTAATTTTT+AGG | + | chr5_3:5892240-5892259 | None:intergenic | 10.0% |
| !!! | GAAAAATAATAGTAATTTTT+AGG | + | chr5_3:5892240-5892259 | None:intergenic | 10.0% |
| !! | AAAATAAAGAATGAAGATTT+AGG | + | chr5_3:5892074-5892093 | None:intergenic | 15.0% |
| !!! | ATAAATATGGTTTTAAATTG+CGG | + | chr5_3:5892538-5892557 | None:intergenic | 15.0% |
| !! | AAAATAAAGAATGAAGATTT+AGG | + | chr5_3:5892074-5892093 | None:intergenic | 15.0% |
| !!! | ATAAATATGGTTTTAAATTG+CGG | + | chr5_3:5892538-5892557 | None:intergenic | 15.0% |
| !!! | TTATAGAGTTTTGGTTTTTT+GGG | + | chr5_3:5891691-5891710 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTTATAGAGTTT+TGG | + | chr5_3:5891700-5891719 | None:intergenic | 20.0% |
| !! | TTAGTGATCAACTATAAATA+TGG | + | chr5_3:5892551-5892570 | None:intergenic | 20.0% |
| !! | TTCTATATTAAAACACTACT+AGG | - | chr5_3:5892814-5892833 | Msa0794090:CDS | 20.0% |
| !!! | TTATAGAGTTTTGGTTTTTT+GGG | + | chr5_3:5891691-5891710 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTTATAGAGTTT+TGG | + | chr5_3:5891700-5891719 | None:intergenic | 20.0% |
| !! | TTAGTGATCAACTATAAATA+TGG | + | chr5_3:5892551-5892570 | None:intergenic | 20.0% |
| !! | TTCTATATTAAAACACTACT+AGG | - | chr5_3:5892814-5892833 | Msa0794090:CDS | 20.0% |
| !!! | TATAGAGTTTTGGTTTTTTG+GGG | + | chr5_3:5891690-5891709 | None:intergenic | 25.0% |
| !!! | GTTATAGAGTTTTGGTTTTT+TGG | + | chr5_3:5891692-5891711 | None:intergenic | 25.0% |
| ! | CTCTATAACATAAACATAGA+TGG | - | chr5_3:5891703-5891722 | Msa0794090:three_prime_UTR | 25.0% |
| ! | AGAGTAATTGACAAATAGAA+TGG | + | chr5_3:5892136-5892155 | None:intergenic | 25.0% |
| !!! | TCATTTTGACTTATATTGAC+AGG | - | chr5_3:5892280-5892299 | Msa0794090:CDS | 25.0% |
| !!! | GTGAAAAATTGTTTTTGATG+CGG | - | chr5_3:5892438-5892457 | Msa0794090:intron | 25.0% |
| !!! | TATAGAGTTTTGGTTTTTTG+GGG | + | chr5_3:5891690-5891709 | None:intergenic | 25.0% |
| !!! | GTTATAGAGTTTTGGTTTTT+TGG | + | chr5_3:5891692-5891711 | None:intergenic | 25.0% |
| ! | CTCTATAACATAAACATAGA+TGG | - | chr5_3:5891703-5891722 | Msa0794090:three_prime_UTR | 25.0% |
| ! | AGAGTAATTGACAAATAGAA+TGG | + | chr5_3:5892136-5892155 | None:intergenic | 25.0% |
| !!! | TCATTTTGACTTATATTGAC+AGG | - | chr5_3:5892280-5892299 | Msa0794090:CDS | 25.0% |
| !!! | GTGAAAAATTGTTTTTGATG+CGG | - | chr5_3:5892438-5892457 | Msa0794090:intron | 25.0% |
| ! | TTTGTTGTGTTTAAGAGTGA+AGG | + | chr5_3:5891654-5891673 | None:intergenic | 30.0% |
| CTTACCATTGATATGTTACA+TGG | + | chr5_3:5891815-5891834 | None:intergenic | 30.0% | |
| !! | CTATTGATTGGTAATGCAAA+AGG | + | chr5_3:5891980-5891999 | None:intergenic | 30.0% |
| ATAGCTAAGGTTCTATTGAT+TGG | + | chr5_3:5891992-5892011 | None:intergenic | 30.0% | |
| CTCAAGGTACATATTACTTA+CGG | - | chr5_3:5892356-5892375 | Msa0794090:intron | 30.0% | |
| !!! | TCACCTTTTTTTCATTGAAC+AGG | - | chr5_3:5892602-5892621 | Msa0794090:CDS | 30.0% |
| GAACCTGTTCAATGAAAAAA+AGG | + | chr5_3:5892608-5892627 | None:intergenic | 30.0% | |
| TTAAAACACTACTAGGTTAC+TGG | - | chr5_3:5892821-5892840 | Msa0794090:CDS | 30.0% | |
| !!! | TACTATCTGTTTTGGTCATT+GGG | - | chr5_3:5892789-5892808 | Msa0794090:CDS | 30.0% |
| AAATTGTTTGGACCCATATT+GGG | - | chr5_3:5892900-5892919 | Msa0794090:exon | 30.0% | |
| CACAACAATACAAATGTCTT+TGG | + | chr5_3:5892942-5892961 | None:intergenic | 30.0% | |
| GTATTGTTGTGTATTATGTG+TGG | - | chr5_3:5892951-5892970 | Msa0794090:five_prime_UTR | 30.0% | |
| ! | TTTGTTGTGTTTAAGAGTGA+AGG | + | chr5_3:5891654-5891673 | None:intergenic | 30.0% |
| CTTACCATTGATATGTTACA+TGG | + | chr5_3:5891815-5891834 | None:intergenic | 30.0% | |
| !! | CTATTGATTGGTAATGCAAA+AGG | + | chr5_3:5891980-5891999 | None:intergenic | 30.0% |
| ATAGCTAAGGTTCTATTGAT+TGG | + | chr5_3:5891992-5892011 | None:intergenic | 30.0% | |
| CTCAAGGTACATATTACTTA+CGG | - | chr5_3:5892356-5892375 | Msa0794090:intron | 30.0% | |
| !!! | TCACCTTTTTTTCATTGAAC+AGG | - | chr5_3:5892602-5892621 | Msa0794090:CDS | 30.0% |
| GAACCTGTTCAATGAAAAAA+AGG | + | chr5_3:5892608-5892627 | None:intergenic | 30.0% | |
| TTAAAACACTACTAGGTTAC+TGG | - | chr5_3:5892821-5892840 | Msa0794090:CDS | 30.0% | |
| !!! | TACTATCTGTTTTGGTCATT+GGG | - | chr5_3:5892789-5892808 | Msa0794090:CDS | 30.0% |
| AAATTGTTTGGACCCATATT+GGG | - | chr5_3:5892900-5892919 | Msa0794090:exon | 30.0% | |
| CACAACAATACAAATGTCTT+TGG | + | chr5_3:5892942-5892961 | None:intergenic | 30.0% | |
| GTATTGTTGTGTATTATGTG+TGG | - | chr5_3:5892951-5892970 | Msa0794090:five_prime_UTR | 30.0% | |
| AGTTTCCTCACAAATAGTAG+TGG | - | chr5_3:5891857-5891876 | Msa0794090:CDS | 35.0% | |
| !! | AGAGTACTTTTGCATTGAAG+TGG | + | chr5_3:5892049-5892068 | None:intergenic | 35.0% |
| TTGACTTATATTGACAGGAC+CGG | - | chr5_3:5892285-5892304 | Msa0794090:CDS | 35.0% | |
| CGTAAGTAATATGTACCTTG+AGG | + | chr5_3:5892358-5892377 | None:intergenic | 35.0% | |
| GTACATATTACTTACGGTCA+AGG | - | chr5_3:5892362-5892381 | Msa0794090:intron | 35.0% | |
| ! | AAGGTTCTAACTTGTAGTTG+CGG | - | chr5_3:5892381-5892400 | Msa0794090:intron | 35.0% |
| CTTCTGTAACCTTTACATTG+TGG | - | chr5_3:5892493-5892512 | Msa0794090:intron | 35.0% | |
| ! | TAGTCTCCTACTATCTGTTT+TGG | - | chr5_3:5892781-5892800 | Msa0794090:CDS | 35.0% |
| CAATGACCAAAACAGATAGT+AGG | + | chr5_3:5892790-5892809 | None:intergenic | 35.0% | |
| !!! | CTACTATCTGTTTTGGTCAT+TGG | - | chr5_3:5892788-5892807 | Msa0794090:CDS | 35.0% |
| ! | TAGTCTCCTACTATCTGTTT+TGG | - | chr5_3:5892781-5892800 | Msa0794090:CDS | 35.0% |
| CAATGACCAAAACAGATAGT+AGG | + | chr5_3:5892790-5892809 | None:intergenic | 35.0% | |
| !!! | CTACTATCTGTTTTGGTCAT+TGG | - | chr5_3:5892788-5892807 | Msa0794090:CDS | 35.0% |
| ! | TGGGTTTTGCTCAAATTGTT+TGG | - | chr5_3:5892888-5892907 | Msa0794090:CDS | 35.0% |
| CAAATTGTTTGGACCCATAT+TGG | - | chr5_3:5892899-5892918 | Msa0794090:exon | 35.0% | |
| AATTGTTTGGACCCATATTG+GGG | - | chr5_3:5892901-5892920 | Msa0794090:exon | 35.0% | |
| AGTTTCCTCACAAATAGTAG+TGG | - | chr5_3:5891857-5891876 | Msa0794090:CDS | 35.0% | |
| !! | AGAGTACTTTTGCATTGAAG+TGG | + | chr5_3:5892049-5892068 | None:intergenic | 35.0% |
| TTGACTTATATTGACAGGAC+CGG | - | chr5_3:5892285-5892304 | Msa0794090:CDS | 35.0% | |
| CGTAAGTAATATGTACCTTG+AGG | + | chr5_3:5892358-5892377 | None:intergenic | 35.0% | |
| GTACATATTACTTACGGTCA+AGG | - | chr5_3:5892362-5892381 | Msa0794090:intron | 35.0% | |
| ! | AAGGTTCTAACTTGTAGTTG+CGG | - | chr5_3:5892381-5892400 | Msa0794090:intron | 35.0% |
| CTTCTGTAACCTTTACATTG+TGG | - | chr5_3:5892493-5892512 | Msa0794090:intron | 35.0% | |
| ! | TAGTCTCCTACTATCTGTTT+TGG | - | chr5_3:5892781-5892800 | Msa0794090:CDS | 35.0% |
| CAATGACCAAAACAGATAGT+AGG | + | chr5_3:5892790-5892809 | None:intergenic | 35.0% | |
| !!! | CTACTATCTGTTTTGGTCAT+TGG | - | chr5_3:5892788-5892807 | Msa0794090:CDS | 35.0% |
| ! | TAGTCTCCTACTATCTGTTT+TGG | - | chr5_3:5892781-5892800 | Msa0794090:CDS | 35.0% |
| CAATGACCAAAACAGATAGT+AGG | + | chr5_3:5892790-5892809 | None:intergenic | 35.0% | |
| !!! | CTACTATCTGTTTTGGTCAT+TGG | - | chr5_3:5892788-5892807 | Msa0794090:CDS | 35.0% |
| ! | TGGGTTTTGCTCAAATTGTT+TGG | - | chr5_3:5892888-5892907 | Msa0794090:CDS | 35.0% |
| CAAATTGTTTGGACCCATAT+TGG | - | chr5_3:5892899-5892918 | Msa0794090:exon | 35.0% | |
| AATTGTTTGGACCCATATTG+GGG | - | chr5_3:5892901-5892920 | Msa0794090:exon | 35.0% | |
| GACGCCATGTAACATATCAA+TGG | - | chr5_3:5891808-5891827 | Msa0794090:CDS | 40.0% | |
| TTGTGAGGAAACTCAAGCAA+GGG | + | chr5_3:5891850-5891869 | None:intergenic | 40.0% | |
| TTTGTGAGGAAACTCAAGCA+AGG | + | chr5_3:5891851-5891870 | None:intergenic | 40.0% | |
| CATTGCCACTACTATTTGTG+AGG | + | chr5_3:5891865-5891884 | None:intergenic | 40.0% | |
| CTCACAAATAGTAGTGGCAA+TGG | - | chr5_3:5891863-5891882 | Msa0794090:CDS | 40.0% | |
| ! | TGTATGTGTCTTATTGCCAC+TGG | - | chr5_3:5891947-5891966 | Msa0794090:CDS | 40.0% |
| !! | TTTGTTGTTCTCTGCAGCTT+CGG | - | chr5_3:5892165-5892184 | Msa0794090:intron | 40.0% |
| ! | TAAGAGATGGTGTCAATGCA+GGG | + | chr5_3:5892333-5892352 | None:intergenic | 40.0% |
| !! | GATAATGGATTGGTTGTCTC+AGG | + | chr5_3:5892674-5892693 | None:intergenic | 40.0% |
| AACCAATACCACCCCAATAT+GGG | + | chr5_3:5892915-5892934 | None:intergenic | 40.0% | |
| AAACCAATACCACCCCAATA+TGG | + | chr5_3:5892916-5892935 | None:intergenic | 40.0% | |
| GACGCCATGTAACATATCAA+TGG | - | chr5_3:5891808-5891827 | Msa0794090:CDS | 40.0% | |
| TTGTGAGGAAACTCAAGCAA+GGG | + | chr5_3:5891850-5891869 | None:intergenic | 40.0% | |
| TTTGTGAGGAAACTCAAGCA+AGG | + | chr5_3:5891851-5891870 | None:intergenic | 40.0% | |
| CATTGCCACTACTATTTGTG+AGG | + | chr5_3:5891865-5891884 | None:intergenic | 40.0% | |
| CTCACAAATAGTAGTGGCAA+TGG | - | chr5_3:5891863-5891882 | Msa0794090:CDS | 40.0% | |
| ! | TGTATGTGTCTTATTGCCAC+TGG | - | chr5_3:5891947-5891966 | Msa0794090:CDS | 40.0% |
| !! | TTTGTTGTTCTCTGCAGCTT+CGG | - | chr5_3:5892165-5892184 | Msa0794090:intron | 40.0% |
| ! | TAAGAGATGGTGTCAATGCA+GGG | + | chr5_3:5892333-5892352 | None:intergenic | 40.0% |
| !! | GATAATGGATTGGTTGTCTC+AGG | + | chr5_3:5892674-5892693 | None:intergenic | 40.0% |
| AACCAATACCACCCCAATAT+GGG | + | chr5_3:5892915-5892934 | None:intergenic | 40.0% | |
| AAACCAATACCACCCCAATA+TGG | + | chr5_3:5892916-5892935 | None:intergenic | 40.0% | |
| GAAACTCAAGCAAGGGCTAA+TGG | + | chr5_3:5891843-5891862 | None:intergenic | 45.0% | |
| ATCCTTGCTTCCACTTGTGA+GGG | + | chr5_3:5891927-5891946 | None:intergenic | 45.0% | |
| AATCCTTGCTTCCACTTGTG+AGG | + | chr5_3:5891928-5891947 | None:intergenic | 45.0% | |
| TGCAAAAGGAACATTGCCAG+TGG | + | chr5_3:5891966-5891985 | None:intergenic | 45.0% | |
| ACGAGGAAGAGAGATAGCTA+AGG | + | chr5_3:5892005-5892024 | None:intergenic | 45.0% | |
| TTGCATTGAAGTGGAACACC+AGG | + | chr5_3:5892040-5892059 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCTCTGCAGCTTC+GGG | - | chr5_3:5892166-5892185 | Msa0794090:intron | 45.0% |
| !! | CATAATAGAGTGTTGCGTCG+CGG | + | chr5_3:5892217-5892236 | None:intergenic | 45.0% |
| ! | AAGAGATGGTGTCAATGCAG+GGG | + | chr5_3:5892332-5892351 | None:intergenic | 45.0% |
| ! | CTAAGAGATGGTGTCAATGC+AGG | + | chr5_3:5892334-5892353 | None:intergenic | 45.0% |
| ACACCATCTCTTAGTCCTCA+AGG | - | chr5_3:5892340-5892359 | Msa0794090:intron | 45.0% | |
| GTACCTTGAGGACTAAGAGA+TGG | + | chr5_3:5892346-5892365 | None:intergenic | 45.0% | |
| ! | TTTTGATGCGGCCACAATTG+TGG | - | chr5_3:5892450-5892469 | Msa0794090:intron | 45.0% |
| !! | CGCTGATGGAGATAATGGAT+TGG | + | chr5_3:5892684-5892703 | None:intergenic | 45.0% |
| GCGTTGCAGATGGAATATCA+GGG | + | chr5_3:5892709-5892728 | None:intergenic | 45.0% | |
| ! | ATGATGGAGTCAGATCAGAG+CGG | + | chr5_3:5892742-5892761 | None:intergenic | 45.0% |
| GATGATGATCCAGCAGATGA+TGG | + | chr5_3:5892758-5892777 | None:intergenic | 45.0% | |
| GAAACTCAAGCAAGGGCTAA+TGG | + | chr5_3:5891843-5891862 | None:intergenic | 45.0% | |
| ATCCTTGCTTCCACTTGTGA+GGG | + | chr5_3:5891927-5891946 | None:intergenic | 45.0% | |
| AATCCTTGCTTCCACTTGTG+AGG | + | chr5_3:5891928-5891947 | None:intergenic | 45.0% | |
| TGCAAAAGGAACATTGCCAG+TGG | + | chr5_3:5891966-5891985 | None:intergenic | 45.0% | |
| ACGAGGAAGAGAGATAGCTA+AGG | + | chr5_3:5892005-5892024 | None:intergenic | 45.0% | |
| TTGCATTGAAGTGGAACACC+AGG | + | chr5_3:5892040-5892059 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCTCTGCAGCTTC+GGG | - | chr5_3:5892166-5892185 | Msa0794090:intron | 45.0% |
| !! | CATAATAGAGTGTTGCGTCG+CGG | + | chr5_3:5892217-5892236 | None:intergenic | 45.0% |
| ! | AAGAGATGGTGTCAATGCAG+GGG | + | chr5_3:5892332-5892351 | None:intergenic | 45.0% |
| ! | CTAAGAGATGGTGTCAATGC+AGG | + | chr5_3:5892334-5892353 | None:intergenic | 45.0% |
| ACACCATCTCTTAGTCCTCA+AGG | - | chr5_3:5892340-5892359 | Msa0794090:intron | 45.0% | |
| GTACCTTGAGGACTAAGAGA+TGG | + | chr5_3:5892346-5892365 | None:intergenic | 45.0% | |
| ! | TTTTGATGCGGCCACAATTG+TGG | - | chr5_3:5892450-5892469 | Msa0794090:intron | 45.0% |
| !! | CGCTGATGGAGATAATGGAT+TGG | + | chr5_3:5892684-5892703 | None:intergenic | 45.0% |
| GCGTTGCAGATGGAATATCA+GGG | + | chr5_3:5892709-5892728 | None:intergenic | 45.0% | |
| ! | ATGATGGAGTCAGATCAGAG+CGG | + | chr5_3:5892742-5892761 | None:intergenic | 45.0% |
| GATGATGATCCAGCAGATGA+TGG | + | chr5_3:5892758-5892777 | None:intergenic | 45.0% | |
| GCATTGCAGCAATCAGCAGT+GGG | + | chr5_3:5891896-5891915 | None:intergenic | 50.0% | |
| TGCATTGCAGCAATCAGCAG+TGG | + | chr5_3:5891897-5891916 | None:intergenic | 50.0% | |
| GCAATCAAGACCCTCACAAG+TGG | - | chr5_3:5891914-5891933 | Msa0794090:CDS | 50.0% | |
| GTCAATGCAGGGGAAAGAGA+TGG | + | chr5_3:5892322-5892341 | None:intergenic | 50.0% | |
| ! | CTAACTTGTAGTTGCGGTCG+TGG | - | chr5_3:5892387-5892406 | Msa0794090:intron | 50.0% |
| CTAGAGCTCGACCACAATTG+TGG | + | chr5_3:5892464-5892483 | None:intergenic | 50.0% | |
| CTACTGCGGCCACAATGTAA+AGG | + | chr5_3:5892505-5892524 | None:intergenic | 50.0% | |
| !! | AGAGAAGGTGTCACTGGTGA+GGG | + | chr5_3:5892641-5892660 | None:intergenic | 50.0% |
| GGGTTCGCTGATGGAGATAA+TGG | + | chr5_3:5892689-5892708 | None:intergenic | 50.0% | |
| GGAATATCAGGGTTCGCTGA+TGG | + | chr5_3:5892698-5892717 | None:intergenic | 50.0% | |
| GGCGTTGCAGATGGAATATC+AGG | + | chr5_3:5892710-5892729 | None:intergenic | 50.0% | |
| GATATTCCATCTGCAACGCC+CGG | - | chr5_3:5892710-5892729 | Msa0794090:CDS | 50.0% | |
| GATCTGACTCCATCATCTGC+TGG | - | chr5_3:5892746-5892765 | Msa0794090:CDS | 50.0% | |
| TGTTTGGACCCATATTGGGG+TGG | - | chr5_3:5892904-5892923 | Msa0794090:exon | 50.0% | |
| GACCCATATTGGGGTGGTAT+TGG | - | chr5_3:5892910-5892929 | Msa0794090:five_prime_UTR | 50.0% | |
| GCATTGCAGCAATCAGCAGT+GGG | + | chr5_3:5891896-5891915 | None:intergenic | 50.0% | |
| TGCATTGCAGCAATCAGCAG+TGG | + | chr5_3:5891897-5891916 | None:intergenic | 50.0% | |
| GCAATCAAGACCCTCACAAG+TGG | - | chr5_3:5891914-5891933 | Msa0794090:CDS | 50.0% | |
| GTCAATGCAGGGGAAAGAGA+TGG | + | chr5_3:5892322-5892341 | None:intergenic | 50.0% | |
| ! | CTAACTTGTAGTTGCGGTCG+TGG | - | chr5_3:5892387-5892406 | Msa0794090:intron | 50.0% |
| CTAGAGCTCGACCACAATTG+TGG | + | chr5_3:5892464-5892483 | None:intergenic | 50.0% | |
| CTACTGCGGCCACAATGTAA+AGG | + | chr5_3:5892505-5892524 | None:intergenic | 50.0% | |
| !! | AGAGAAGGTGTCACTGGTGA+GGG | + | chr5_3:5892641-5892660 | None:intergenic | 50.0% |
| GGGTTCGCTGATGGAGATAA+TGG | + | chr5_3:5892689-5892708 | None:intergenic | 50.0% | |
| GGAATATCAGGGTTCGCTGA+TGG | + | chr5_3:5892698-5892717 | None:intergenic | 50.0% | |
| GGCGTTGCAGATGGAATATC+AGG | + | chr5_3:5892710-5892729 | None:intergenic | 50.0% | |
| GATATTCCATCTGCAACGCC+CGG | - | chr5_3:5892710-5892729 | Msa0794090:CDS | 50.0% | |
| GATCTGACTCCATCATCTGC+TGG | - | chr5_3:5892746-5892765 | Msa0794090:CDS | 50.0% | |
| TGTTTGGACCCATATTGGGG+TGG | - | chr5_3:5892904-5892923 | Msa0794090:exon | 50.0% | |
| GACCCATATTGGGGTGGTAT+TGG | - | chr5_3:5892910-5892929 | Msa0794090:five_prime_UTR | 50.0% | |
| GTCTCTCTACCGCCTAACTG+TGG | - | chr5_3:5891736-5891755 | Msa0794090:three_prime_UTR | 55.0% | |
| CGGCTAACACCACAGTTAGG+CGG | + | chr5_3:5891748-5891767 | None:intergenic | 55.0% | |
| CCACGGCTAACACCACAGTT+AGG | + | chr5_3:5891751-5891770 | None:intergenic | 55.0% | |
| ! | CCTAACTGTGGTGTTAGCCG+TGG | - | chr5_3:5891748-5891767 | Msa0794090:three_prime_UTR | 55.0% |
| GTTAGCCGTGGCTTCGATCA+TGG | - | chr5_3:5891760-5891779 | Msa0794090:three_prime_UTR | 55.0% | |
| TGCAGCCATGATCGAAGCCA+CGG | + | chr5_3:5891768-5891787 | None:intergenic | 55.0% | |
| GTCGTGATTTGAGCGTAGGC+TGG | + | chr5_3:5891791-5891810 | None:intergenic | 55.0% | |
| TGGCGTCGTGATTTGAGCGT+AGG | + | chr5_3:5891795-5891814 | None:intergenic | 55.0% | |
| GACCCTCACAAGTGGAAGCA+AGG | - | chr5_3:5891922-5891941 | Msa0794090:CDS | 55.0% | |
| CCAGGCAAGTTACAAGCACG+AGG | + | chr5_3:5892022-5892041 | None:intergenic | 55.0% | |
| ! | CCTCGTGCTTGTAACTTGCC+TGG | - | chr5_3:5892019-5892038 | Msa0794090:intron | 55.0% |
| GGTTTACCTGGAGCAGGAAG+CGG | + | chr5_3:5892196-5892215 | None:intergenic | 55.0% | |
| TTGACAGGACCGGCGTCTTT+CGG | - | chr5_3:5892295-5892314 | Msa0794090:CDS | 55.0% | |
| GCGGTCAGCAACAACTACTG+CGG | + | chr5_3:5892519-5892538 | None:intergenic | 55.0% | |
| !! | CAGAGAAGGTGTCACTGGTG+AGG | + | chr5_3:5892642-5892661 | None:intergenic | 55.0% |
| !! | GGTGACAGAGAAGGTGTCAC+TGG | + | chr5_3:5892647-5892666 | None:intergenic | 55.0% |
| TCAGGCTGTGGTGACAGAGA+AGG | + | chr5_3:5892656-5892675 | None:intergenic | 55.0% | |
| !! | GGATTGGTTGTCTCAGGCTG+TGG | + | chr5_3:5892668-5892687 | None:intergenic | 55.0% |
| GTCTCTCTACCGCCTAACTG+TGG | - | chr5_3:5891736-5891755 | Msa0794090:three_prime_UTR | 55.0% | |
| CGGCTAACACCACAGTTAGG+CGG | + | chr5_3:5891748-5891767 | None:intergenic | 55.0% | |
| CCACGGCTAACACCACAGTT+AGG | + | chr5_3:5891751-5891770 | None:intergenic | 55.0% | |
| ! | CCTAACTGTGGTGTTAGCCG+TGG | - | chr5_3:5891748-5891767 | Msa0794090:three_prime_UTR | 55.0% |
| GTTAGCCGTGGCTTCGATCA+TGG | - | chr5_3:5891760-5891779 | Msa0794090:three_prime_UTR | 55.0% | |
| TGCAGCCATGATCGAAGCCA+CGG | + | chr5_3:5891768-5891787 | None:intergenic | 55.0% | |
| GTCGTGATTTGAGCGTAGGC+TGG | + | chr5_3:5891791-5891810 | None:intergenic | 55.0% | |
| TGGCGTCGTGATTTGAGCGT+AGG | + | chr5_3:5891795-5891814 | None:intergenic | 55.0% | |
| GACCCTCACAAGTGGAAGCA+AGG | - | chr5_3:5891922-5891941 | Msa0794090:CDS | 55.0% | |
| CCAGGCAAGTTACAAGCACG+AGG | + | chr5_3:5892022-5892041 | None:intergenic | 55.0% | |
| ! | CCTCGTGCTTGTAACTTGCC+TGG | - | chr5_3:5892019-5892038 | Msa0794090:intron | 55.0% |
| GGTTTACCTGGAGCAGGAAG+CGG | + | chr5_3:5892196-5892215 | None:intergenic | 55.0% | |
| TTGACAGGACCGGCGTCTTT+CGG | - | chr5_3:5892295-5892314 | Msa0794090:CDS | 55.0% | |
| GCGGTCAGCAACAACTACTG+CGG | + | chr5_3:5892519-5892538 | None:intergenic | 55.0% | |
| !! | CAGAGAAGGTGTCACTGGTG+AGG | + | chr5_3:5892642-5892661 | None:intergenic | 55.0% |
| !! | GGTGACAGAGAAGGTGTCAC+TGG | + | chr5_3:5892647-5892666 | None:intergenic | 55.0% |
| TCAGGCTGTGGTGACAGAGA+AGG | + | chr5_3:5892656-5892675 | None:intergenic | 55.0% | |
| !! | GGATTGGTTGTCTCAGGCTG+TGG | + | chr5_3:5892668-5892687 | None:intergenic | 55.0% |
| GCAGCAATCAGCAGTGGGTG+AGG | + | chr5_3:5891891-5891910 | None:intergenic | 60.0% | |
| GTGTTGCGTCGCGGTTTACC+TGG | + | chr5_3:5892208-5892227 | None:intergenic | 60.0% | |
| TGACAGGACCGGCGTCTTTC+GGG | - | chr5_3:5892296-5892315 | Msa0794090:CDS | 60.0% | |
| AGAGATGGCCCGAAAGACGC+CGG | + | chr5_3:5892307-5892326 | None:intergenic | 60.0% | |
| AGATCAGAGCGGCCACTTCC+GGG | + | chr5_3:5892731-5892750 | None:intergenic | 60.0% | |
| CAGATCAGAGCGGCCACTTC+CGG | + | chr5_3:5892732-5892751 | None:intergenic | 60.0% | |
| GCAGCAATCAGCAGTGGGTG+AGG | + | chr5_3:5891891-5891910 | None:intergenic | 60.0% | |
| GTGTTGCGTCGCGGTTTACC+TGG | + | chr5_3:5892208-5892227 | None:intergenic | 60.0% | |
| TGACAGGACCGGCGTCTTTC+GGG | - | chr5_3:5892296-5892315 | Msa0794090:CDS | 60.0% | |
| AGAGATGGCCCGAAAGACGC+CGG | + | chr5_3:5892307-5892326 | None:intergenic | 60.0% | |
| AGATCAGAGCGGCCACTTCC+GGG | + | chr5_3:5892731-5892750 | None:intergenic | 60.0% | |
| CAGATCAGAGCGGCCACTTC+CGG | + | chr5_3:5892732-5892751 | None:intergenic | 60.0% | |
| CGTCGCGGTTTACCTGGAGC+AGG | + | chr5_3:5892202-5892221 | None:intergenic | 65.0% | |
| ! | CCACTTCCGGGCGTTGCAGA+TGG | + | chr5_3:5892719-5892738 | None:intergenic | 65.0% |
| CCATCTGCAACGCCCGGAAG+TGG | - | chr5_3:5892716-5892735 | Msa0794090:CDS | 65.0% | |
| CGTCGCGGTTTACCTGGAGC+AGG | + | chr5_3:5892202-5892221 | None:intergenic | 65.0% | |
| ! | CCACTTCCGGGCGTTGCAGA+TGG | + | chr5_3:5892719-5892738 | None:intergenic | 65.0% |
| CCATCTGCAACGCCCGGAAG+TGG | - | chr5_3:5892716-5892735 | Msa0794090:CDS | 65.0% | |
| GGCTCACCGCTTCCTGCTCC+AGG | - | chr5_3:5892187-5892206 | Msa0794090:intron | 70.0% | |
| GGCTCACCGCTTCCTGCTCC+AGG | - | chr5_3:5892187-5892206 | Msa0794090:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 5891630 | 5892999 | 5891630 | ID=Msa0794090;Name=Msa0794090 |
| chr5_3 | mRNA | 5891630 | 5892999 | 5891630 | ID=Msa0794090-mRNA-1;Parent=Msa0794090;Name=Msa0794090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=92|1|1|1|1|1|4|164|212 |
| chr5_3 | exon | 5891630 | 5892005 | 5891630 | ID=Msa0794090-mRNA-1:exon:2402;Parent=Msa0794090-mRNA-1 |
| chr5_3 | exon | 5892268 | 5892327 | 5892268 | ID=Msa0794090-mRNA-1:exon:2401;Parent=Msa0794090-mRNA-1 |
| chr5_3 | exon | 5892421 | 5892447 | 5892421 | ID=Msa0794090-mRNA-1:exon:2400;Parent=Msa0794090-mRNA-1 |
| chr5_3 | exon | 5892568 | 5892999 | 5892568 | ID=Msa0794090-mRNA-1:exon:2399;Parent=Msa0794090-mRNA-1 |
| chr5_3 | five_prime_UTR | 5892908 | 5892999 | 5892908 | ID=Msa0794090-mRNA-1:five_prime_utr;Parent=Msa0794090-mRNA-1 |
| chr5_3 | CDS | 5892568 | 5892907 | 5892568 | ID=Msa0794090-mRNA-1:cds;Parent=Msa0794090-mRNA-1 |
| chr5_3 | CDS | 5892421 | 5892447 | 5892421 | ID=Msa0794090-mRNA-1:cds;Parent=Msa0794090-mRNA-1 |
| chr5_3 | CDS | 5892268 | 5892327 | 5892268 | ID=Msa0794090-mRNA-1:cds;Parent=Msa0794090-mRNA-1 |
| chr5_3 | CDS | 5891794 | 5892005 | 5891794 | ID=Msa0794090-mRNA-1:cds;Parent=Msa0794090-mRNA-1 |
| chr5_3 | three_prime_UTR | 5891630 | 5891793 | 5891630 | ID=Msa0794090-mRNA-1:three_prime_utr;Parent=Msa0794090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
